SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.0E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 PANTHER PTHR15680 1 115 1.2E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 SUPERFAMILY SSF50104 1 114 9.83E-48 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.245 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 Pfam PF01245 Ribosomal protein L19 3 113 2.1E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04660 847a61000f3d52d6fed15c218608b114 117 PIRSF PIRSF002191 1 117 1.1E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 Gene3D G3DSA:1.10.10.10 2 85 3.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 Pfam PF03466 LysR substrate binding domain 89 292 2.3E-36 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 SUPERFAMILY SSF46785 3 86 9.64E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 Gene3D G3DSA:3.40.190.10 177 260 2.6E-19 T 22-04-2016 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 SUPERFAMILY SSF53850 89 294 4.19E-40 T 22-04-2016 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 PANTHER PTHR30537 1 292 7.2E-143 T 22-04-2016 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 Gene3D G3DSA:3.40.190.10 92 176 1.5E-20 T 22-04-2016 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 PANTHER PTHR30537:SF27 1 292 7.2E-143 T 22-04-2016 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03080 a6d9c3a9ad0d5323563959a6b1b538ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 Pfam PF00691 OmpA family 129 215 1.1E-16 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 PRINTS PR01021 OMPA domain signature 129 151 1.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 PRINTS PR01021 OMPA domain signature 174 190 1.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 PRINTS PR01021 OMPA domain signature 159 174 1.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 TIGRFAM TIGR03789 pdsO: proteobacterial sortase system peptidoglycan-associated protein 14 228 2.1E-82 T 22-04-2016 IPR022511 Proteobacterial sortase system peptidoglycan-associated protein SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 SUPERFAMILY SSF103088 121 231 8.76E-27 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 Gene3D G3DSA:3.30.1330.60 109 229 9.9E-27 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 PANTHER PTHR30128 41 110 5.4E-26 T 22-04-2016 SAMA_RS10460 839bc353b4f3fc9a5ede50417c3cd867 240 PANTHER PTHR30128 127 234 5.4E-26 T 22-04-2016 SAMA_RS01670 a051d20f13f3e4c86abddb15f80f2205 197 SUPERFAMILY SSF143081 2 185 2.62E-44 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01670 a051d20f13f3e4c86abddb15f80f2205 197 Gene3D G3DSA:3.90.1680.10 1 180 1.2E-38 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01670 a051d20f13f3e4c86abddb15f80f2205 197 Pfam PF02586 SOS response associated peptidase (SRAP) 1 186 4.0E-31 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01670 a051d20f13f3e4c86abddb15f80f2205 197 PANTHER PTHR13604 55 171 6.6E-24 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 9.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 9.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 9.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PANTHER PTHR24322 15 143 2.5E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PANTHER PTHR24322 159 194 2.5E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PANTHER PTHR24322:SF211 15 143 2.5E-38 T 22-04-2016 SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PANTHER PTHR24322:SF211 159 194 2.5E-38 T 22-04-2016 SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 7.5E-37 T 22-04-2016 SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 Gene3D G3DSA:3.40.50.720 11 244 1.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09205 d28ce0ea49c380499754655a24e0f3b1 252 SUPERFAMILY SSF51735 11 246 1.02E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 101 3.4E-25 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 SUPERFAMILY SSF50104 4 101 2.18E-34 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 Gene3D G3DSA:2.30.30.30 3 92 9.8E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 PANTHER PTHR12903 4 101 8.1E-47 T 22-04-2016 SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 4.4E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01180 29f1362359cde3862a74074723e10c5c 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.366 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 PANTHER PTHR38834 9 241 1.5E-59 T 22-04-2016 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 PANTHER PTHR38834:SF1 9 241 1.5E-59 T 22-04-2016 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 Gene3D G3DSA:3.40.190.10 9 91 7.9E-12 T 22-04-2016 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 Gene3D G3DSA:3.40.190.10 191 230 7.9E-12 T 22-04-2016 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 14 228 2.8E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 SUPERFAMILY SSF53850 10 229 3.15E-28 T 22-04-2016 SAMA_RS13750 c8401d455dc476ceb2bc0373f5645d4f 246 SMART SM00062 9 230 4.1E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 3 190 29.996 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 187 3.4E-74 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 PANTHER PTHR19136 1 192 2.7E-51 T 22-04-2016 SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 Gene3D G3DSA:3.90.550.10 4 195 1.4E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 Pfam PF12804 MobA-like NTP transferase domain 7 157 5.0E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 PANTHER PTHR19136:SF81 1 192 2.7E-51 T 22-04-2016 SAMA_RS00610 0475b5e84ceda59a648149ba5874b891 196 SUPERFAMILY SSF53448 4 186 7.15E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 167 183 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 198 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 Pfam PF00325 Bacterial regulatory proteins, crp family 167 198 8.7E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 SMART SM00100 3 123 6.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 ProSitePatterns PS00042 Crp-type HTH domain signature. 169 192 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 Pfam PF00027 Cyclic nucleotide-binding domain 24 110 1.2E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 Gene3D G3DSA:1.10.10.10 145 208 3.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 SMART SM00419 161 209 2.3E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 SUPERFAMILY SSF46785 140 208 3.87E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 SUPERFAMILY SSF51206 9 138 3.93E-34 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 Gene3D G3DSA:2.60.120.10 8 144 2.7E-42 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 PANTHER PTHR24567:SF27 1 208 5.5E-150 T 22-04-2016 SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 90 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site SAMA_RS15670 f94f8636424488049d60f7ef8c7b3746 211 PANTHER PTHR24567 1 208 5.5E-150 T 22-04-2016 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 SUPERFAMILY SSF46906 68 141 3.14E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 SMART SM00649 9 141 3.6E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.0E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 Gene3D G3DSA:1.10.10.250 73 141 1.2E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.208 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 SUPERFAMILY SSF54747 3 73 4.19E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-22 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-17 T 22-04-2016 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 PANTHER PTHR11661 1 142 1.6E-68 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 Gene3D G3DSA:3.30.1550.10 2 72 2.4E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SAMA_RS01070 a858d6b508731807d4d9ab651b2c9736 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.5E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.0E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.066 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 Gene3D G3DSA:3.30.230.10 5 130 9.0E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 PANTHER PTHR21569 1 130 6.5E-73 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16020 808716a0bc9ac119ce90a44a80911bad 130 SUPERFAMILY SSF54211 5 130 7.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 296 1.3E-28 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 Pfam PF08029 HisG, C-terminal domain 221 294 6.6E-23 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 PANTHER PTHR21403:SF0 4 296 1.9E-123 T 22-04-2016 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 154 175 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 Gene3D G3DSA:3.40.190.10 2 137 4.0E-51 T 22-04-2016 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 SUPERFAMILY SSF54913 224 296 1.11E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 Gene3D G3DSA:3.30.70.120 224 296 2.2E-28 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 Pfam PF01634 ATP phosphoribosyltransferase 52 216 1.8E-47 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 SUPERFAMILY SSF53850 4 222 1.04E-65 T 22-04-2016 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 PANTHER PTHR21403 4 296 1.9E-123 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 195 1.3E-55 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS10150 4304256ea816ee4fa4890d3c2c8f8737 297 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 4 297 35.011 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF81653 288 385 7.19E-28 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Pfam PF00122 E1-E2 ATPase 257 476 1.4E-69 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PANTHER PTHR24093:SF332 5 786 2.5E-250 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF55008 71 138 1.15E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF56784 484 503 2.24E-55 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF56784 541 782 2.24E-55 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 201 785 2.6E-174 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PANTHER PTHR24093 5 786 2.5E-250 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 258 763 8.2E-90 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:3.40.1110.10 504 582 3.4E-9 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF81665 386 479 2.75E-14 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF81665 731 752 2.75E-14 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF81665 230 289 2.75E-14 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Pfam PF00403 Heavy-metal-associated domain 72 131 5.3E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Pfam PF00403 Heavy-metal-associated domain 7 64 5.8E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 219 784 1.1E-181 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 71 132 5.0E-12 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 66 7.5E-10 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 696 6.3E-43 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:3.40.50.1000 602 750 2.0E-51 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:3.40.50.1000 456 501 2.0E-51 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 ProSitePatterns PS01047 Heavy-metal-associated domain. 74 103 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:3.30.70.100 4 67 9.4E-20 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:3.30.70.100 71 147 8.9E-22 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 SUPERFAMILY SSF55008 4 68 8.9E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 Gene3D G3DSA:2.70.150.10 247 386 2.5E-33 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00941 Cadmium-transporting ATPase signature 370 384 4.1E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00941 Cadmium-transporting ATPase signature 72 81 4.1E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00941 Cadmium-transporting ATPase signature 207 219 4.1E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00941 Cadmium-transporting ATPase signature 351 367 4.1E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00941 Cadmium-transporting ATPase signature 83 104 4.1E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 9.2E-25 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 9.2E-25 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 9.2E-25 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 9.2E-25 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 9.2E-25 T 22-04-2016 SAMA_RS09310 e3e3ae0c4605f360895e72a689045afb 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 9.2E-25 T 22-04-2016 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 36 118 4.2E-21 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 4.0E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 PANTHER PTHR10851:SF0 1 212 2.2E-107 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 37.765 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 Gene3D G3DSA:2.30.110.10 10 212 2.0E-80 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 212 1.6E-87 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 SUPERFAMILY SSF50475 15 212 1.44E-63 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 PANTHER PTHR10851 1 212 2.2E-107 T 22-04-2016 SAMA_RS10250 eae243ec6e3b1aaea4d19feb5f4f5baf 212 PIRSF PIRSF000190 1 212 3.1E-79 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 Pfam PF08487 Vault protein inter-alpha-trypsin domain 79 186 7.6E-28 T 22-04-2016 IPR013694 VIT domain SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 77 735 6.7E-171 T 22-04-2016 IPR022440 Conserved hypothetical protein CHP03788 SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 PANTHER PTHR10338 289 681 7.1E-91 T 22-04-2016 SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 SUPERFAMILY SSF53300 384 549 3.34E-25 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 PANTHER PTHR10338:SF95 79 265 7.1E-91 T 22-04-2016 SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 Pfam PF13768 von Willebrand factor type A domain 385 541 2.2E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 SMART SM00609 59 188 6.1E-6 T 22-04-2016 IPR013694 VIT domain SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 PANTHER PTHR10338:SF95 289 681 7.1E-91 T 22-04-2016 SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 SMART SM00327 383 553 1.7E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 Gene3D G3DSA:3.40.50.410 384 556 1.4E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS10455 64cfe6f59eb3e28d26d7d3d79198bf8d 740 PANTHER PTHR10338 79 265 7.1E-91 T 22-04-2016 SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 SMART SM00316 4 72 3.8E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 SUPERFAMILY SSF50249 1 70 1.39E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 Gene3D G3DSA:2.40.50.140 1 71 8.6E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.374 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 4.2E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SAMA_RS10715 1dd14c8b8569f49dfa9b83fa8b285b8f 72 PANTHER PTHR33370 1 72 1.0E-49 T 22-04-2016 SAMA_RS10360 3e477856bd7c86b29c806978abb13fe7 56 Pfam PF01783 Ribosomal L32p protein family 2 56 6.1E-21 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SAMA_RS10360 3e477856bd7c86b29c806978abb13fe7 56 PANTHER PTHR35534 1 56 7.4E-29 T 22-04-2016 SAMA_RS10360 3e477856bd7c86b29c806978abb13fe7 56 SUPERFAMILY SSF57829 2 55 2.32E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SAMA_RS10360 3e477856bd7c86b29c806978abb13fe7 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.5E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SAMA_RS10360 3e477856bd7c86b29c806978abb13fe7 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.505 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:1.10.3850.10 851 1067 1.2E-65 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PANTHER PTHR32063:SF0 1 495 0.0 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PANTHER PTHR32063:SF0 555 1068 0.0 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82714 184 265 6.41E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82693 41 131 2.09E-22 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.70.1430 41 137 6.3E-26 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82693 613 709 3.14E-10 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.2090.10 759 845 2.5E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.2090.10 184 265 2.3E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.70.1320 138 179 1.7E-8 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.70.1320 270 298 1.7E-8 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82866 843 1068 1.27E-56 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:3.30.70.1430 614 718 1.6E-10 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82714 760 846 4.32E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Gene3D G3DSA:1.20.1640.10 299 487 9.1E-58 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 SUPERFAMILY SSF82866 290 486 2.09E-44 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Pfam PF00873 AcrB/AcrD/AcrF family 3 486 1.6E-131 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 Pfam PF00873 AcrB/AcrD/AcrF family 559 1064 6.1E-116 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PANTHER PTHR32063 1 495 0.0 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PANTHER PTHR32063 555 1068 0.0 T 22-04-2016 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07395 d5643f4c686aee69d14f875ea9765451 1081 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.4E-50 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SUPERFAMILY SSF50249 139 237 9.43E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.562 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Pfam PF00575 S1 RNA binding domain 642 724 9.6E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 ProSitePatterns PS01175 Ribonuclease II family signature. 554 578 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Pfam PF08206 Ribonuclease B OB domain 87 143 7.2E-20 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SMART SM00316 642 725 4.8E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Gene3D G3DSA:2.40.50.140 644 726 6.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SUPERFAMILY SSF50249 220 642 5.14E-143 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 2.5E-9 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SMART SM00955 260 587 2.8E-184 T 22-04-2016 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 PANTHER PTHR23355:SF9 1 803 3.3E-282 T 22-04-2016 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 724 7.9E-264 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 Pfam PF00773 RNB domain 260 586 5.9E-105 T 22-04-2016 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 723 8.1E-244 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SUPERFAMILY SSF50249 643 725 7.38E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 PANTHER PTHR23355 1 803 3.3E-282 T 22-04-2016 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SMART SM00357 86 145 1.1E-8 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SAMA_RS16005 3a8e86684639e9f344489c28d066e1f6 808 SUPERFAMILY SSF50249 67 146 1.71E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 Gene3D G3DSA:3.40.50.410 79 280 6.1E-29 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 SMART SM00327 82 283 7.3E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 PANTHER PTHR22550 1 316 1.1E-147 T 22-04-2016 SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 PANTHER PTHR22550:SF12 1 316 1.1E-147 T 22-04-2016 SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 Pfam PF00092 von Willebrand factor type A domain 84 276 6.1E-27 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS11345 70e39273bf5e8444d01f6964fec8f265 327 SUPERFAMILY SSF53300 79 280 3.56E-37 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.366.10 586 728 4.5E-51 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.366.10 803 900 4.5E-51 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00698 Acyl transferase domain 594 892 2.3E-32 T 22-04-2016 IPR014043 Acyl transferase SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF47336 1293 1390 6.02E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 21 300 1.4E-75 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00550 Phosphopantetheine attachment site 1650 1715 4.1E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00550 Phosphopantetheine attachment site 1502 1567 1.2E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00550 Phosphopantetheine attachment site 1401 1466 1.3E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00550 Phosphopantetheine attachment site 1299 1364 1.7E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF00550 Phosphopantetheine attachment site 1199 1264 1.4E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF14765 Polyketide synthase dehydratase 2281 2527 2.3E-23 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712:SF234 184 1023 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712:SF234 1 151 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712:SF234 2302 2525 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.50.720 2068 2215 3.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.50.720 1990 2021 3.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF53901 196 421 3.52E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF53901 19 140 3.52E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF53901 455 474 3.52E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.30.70.250 735 802 1.5E-13 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF47336 1194 1285 1.06E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:1.10.1200.10 1292 1367 4.0E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:1.10.1200.10 1194 1267 1.2E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:1.10.1200.10 1393 1469 4.7E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:1.10.1200.10 1495 1567 4.9E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:1.10.1200.10 1642 1715 1.2E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1988 2213 1.4E-41 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.47.10 23 312 1.7E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF51735 1989 2029 2.07E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF51735 2073 2250 2.07E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Gene3D G3DSA:3.40.47.10 313 480 5.5E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 308 425 1.2E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 TIGRFAM TIGR02813 omega_3_PfaA: polyketide-type polyunsaturated fatty acid synthase PfaA 15 1189 0.0 T 22-04-2016 IPR004432 Polyketide-type polyunsaturated fatty acid synthase, PfaA SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 594 920 5.0E-35 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF47336 1494 1568 1.96E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF47336 1393 1485 1.44E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF08659 KR domain 1991 2211 2.7E-29 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SMART SM00825 Beta-ketoacyl synthase 23 480 2.8E-98 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF47336 1641 1716 1.13E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF52151 804 899 6.8E-50 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF52151 590 734 6.8E-50 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712 184 1023 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712 1 151 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 PANTHER PTHR11712 2302 2525 4.9E-262 T 22-04-2016 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF51735 1759 1969 5.05E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 SUPERFAMILY SSF55048 736 803 1.96E-12 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SAMA_RS05845 054ccf94022bad910658e430dd8233c0 2542 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 428 522 2.4E-10 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 2.3E-50 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 1.6E-48 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 Gene3D G3DSA:1.10.1040.10 192 335 9.0E-57 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PANTHER PTHR11728 7 334 1.7E-137 T 22-04-2016 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 SUPERFAMILY SSF48179 182 334 2.72E-55 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 325 37.112 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 135 155 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.0E-40 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 SUPERFAMILY SSF51735 6 181 2.74E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 PIRSF PIRSF000114 1 335 6.4E-97 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SAMA_RS00320 b91497c2dcef3af3576cc3539e46f00a 339 Gene3D G3DSA:3.40.50.720 6 182 2.8E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 Pfam PF02421 Ferrous iron transport protein B 6 165 6.7E-60 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 690 6.7E-178 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 Pfam PF07664 Ferrous iron transport protein B C terminus 455 506 1.2E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 Pfam PF07670 Nucleoside recognition 352 444 3.7E-14 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 Pfam PF07670 Nucleoside recognition 513 693 1.0E-33 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 164 2.1E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649:SF37 661 728 6.1E-247 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649:SF37 10 153 6.1E-247 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649:SF37 262 612 6.1E-247 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 Gene3D G3DSA:3.40.50.300 4 173 8.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649 661 728 6.1E-247 T 22-04-2016 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649 10 153 6.1E-247 T 22-04-2016 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PANTHER PTHR11649 262 612 6.1E-247 T 22-04-2016 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 SUPERFAMILY SSF52540 6 179 7.34E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 7.2E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS06360 01071bd78befb104b57acb8d137431a5 764 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 7.2E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 92 7.0E-45 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 SUPERFAMILY SSF50715 3 94 5.23E-31 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 Gene3D G3DSA:2.40.240.10 3 93 3.3E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 Pfam PF01386 Ribosomal L25p family 7 92 2.7E-24 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 93 5.8E-22 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 27.58 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SAMA_RS08435 558757aa063530499b46bfd72d105ffb 95 PANTHER PTHR33284 1 95 4.6E-36 T 22-04-2016 SAMA_RS16775 82e17752e97ba7ba94ac21bf026408e1 224 SUPERFAMILY SSF81343 8 220 6.02E-61 T 22-04-2016 SAMA_RS16775 82e17752e97ba7ba94ac21bf026408e1 224 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 97 209 5.7E-11 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SAMA_RS16775 82e17752e97ba7ba94ac21bf026408e1 224 PIRSF PIRSF000177 4 222 1.9E-59 T 22-04-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 SAMA_RS16775 82e17752e97ba7ba94ac21bf026408e1 224 Gene3D G3DSA:1.20.950.10 8 220 3.2E-70 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82693 138 184 7.85E-19 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82693 272 324 7.85E-19 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Gene3D G3DSA:1.20.1640.10 289 497 8.0E-40 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Gene3D G3DSA:1.10.3850.10 798 1008 4.1E-55 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82714 186 269 1.31E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Gene3D G3DSA:3.30.2090.10 710 784 1.5E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Gene3D G3DSA:3.30.2090.10 187 269 2.5E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82866 299 492 5.1E-33 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 4.1E-156 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PANTHER PTHR32063 1 1010 0.0 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82693 41 137 5.23E-19 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82714 709 784 6.8E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 Gene3D G3DSA:3.30.70.1430 41 144 1.9E-25 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PANTHER PTHR32063:SF18 1 1010 0.0 T 22-04-2016 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.5E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS08950 140dbd59e74f9ec7649477d987f604f4 1014 SUPERFAMILY SSF82866 792 1008 8.76E-43 T 22-04-2016 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 SUPERFAMILY SSF53335 65 127 5.22E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 SUPERFAMILY SSF53335 155 319 2.43E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 Pfam PF08468 Methyltransferase small domain N-terminal 6 163 2.4E-45 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 Pfam PF05175 Methyltransferase small domain 172 336 8.4E-56 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 2 340 43.197 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 PANTHER PTHR18895 77 336 1.2E-72 T 22-04-2016 SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 Gene3D G3DSA:3.40.50.150 170 334 6.8E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03030 2dd6d358b4696a9d52fe91af9dde1e70 341 PANTHER PTHR18895:SF70 77 336 1.2E-72 T 22-04-2016 SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 PANTHER PTHR10160 155 494 1.3E-243 T 22-04-2016 SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 PANTHER PTHR10160 4 120 1.3E-243 T 22-04-2016 SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 SUPERFAMILY SSF52467 321 494 4.77E-78 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 Gene3D G3DSA:3.40.50.1220 320 494 9.1E-92 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 492 4.2E-198 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SAMA_RS14840 737317d120da58f0ec6d6da55b7b8fdd 494 PIRSF PIRSF000204 1 494 3.4E-232 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 Gene3D G3DSA:3.60.15.10 4 258 1.8E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 PIRSF PIRSF005457 1 258 2.4E-88 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 PANTHER PTHR11935:SF7 1 258 1.8E-84 T 22-04-2016 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 258 42.069 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 SUPERFAMILY SSF56281 3 258 9.61E-66 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 SMART SM00849 12 170 1.7E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 258 1.1E-92 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 Pfam PF00753 Metallo-beta-lactamase superfamily 15 170 1.3E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 PANTHER PTHR11935 1 258 1.8E-84 T 22-04-2016 SAMA_RS09865 373b16dd50cbfb18aa91191094256248 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 258 4.1E-28 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS16420 4d2c399bdf4577ab79c9650b2122c85c 210 PANTHER PTHR35147 17 210 8.3E-64 T 22-04-2016 SAMA_RS16420 4d2c399bdf4577ab79c9650b2122c85c 210 Pfam PF03975 CheD chemotactic sensory transduction 70 175 1.3E-29 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SAMA_RS16420 4d2c399bdf4577ab79c9650b2122c85c 210 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 22 179 27.983 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SAMA_RS16420 4d2c399bdf4577ab79c9650b2122c85c 210 SUPERFAMILY SSF64438 28 179 2.84E-47 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SAMA_RS16420 4d2c399bdf4577ab79c9650b2122c85c 210 PANTHER PTHR35147:SF2 17 210 8.3E-64 T 22-04-2016 SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 PANTHER PTHR12231:SF138 40 141 3.1E-38 T 22-04-2016 SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 SMART SM00450 40 138 3.2E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 Pfam PF00581 Rhodanese-like domain 42 135 3.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 Gene3D G3DSA:3.40.250.10 25 141 1.3E-32 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 PANTHER PTHR12231 40 141 3.1E-38 T 22-04-2016 SAMA_RS00310 7f1fb6e04572b6c1f501c19f81f9311d 142 SUPERFAMILY SSF52821 13 139 3.4E-35 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 PANTHER PTHR33121 4 157 2.6E-48 T 22-04-2016 SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 Gene3D G3DSA:3.30.450.40 24 159 5.5E-14 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 320 8.3E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 PANTHER PTHR33121:SF12 4 157 2.6E-48 T 22-04-2016 SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 Gene3D G3DSA:3.30.70.270 166 319 2.4E-39 T 22-04-2016 SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 SUPERFAMILY SSF55781 28 162 4.8E-27 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 319 2.2E-35 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 Pfam PF01590 GAF domain 28 154 2.2E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 SMART SM00267 151 323 6.3E-40 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 SMART SM00065 26 168 3.3E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS10190 43dda1ac3ff0a744e4b2e9ea5dcb27bd 327 SUPERFAMILY SSF55073 169 319 1.65E-34 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PANTHER PTHR23115 250 471 1.8E-247 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PANTHER PTHR23115 1 183 1.8E-247 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Pfam PF03144 Elongation factor Tu domain 2 313 379 5.8E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 172 8.0E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Gene3D G3DSA:3.40.50.300 10 281 7.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PANTHER PTHR23115:SF69 250 471 1.8E-247 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PANTHER PTHR23115:SF69 1 183 1.8E-247 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 SUPERFAMILY SSF54980 392 467 4.32E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 512 2.7E-45 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PRINTS PR00315 GTP-binding elongation factor signature 64 72 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Gene3D G3DSA:3.30.70.870 394 463 3.6E-15 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Pfam PF00009 Elongation factor Tu GTP binding domain 13 276 1.4E-46 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 SUPERFAMILY SSF50447 261 392 3.31E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 528 2.1E-304 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 526 51.809 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 Gene3D G3DSA:2.40.30.10 292 393 6.2E-25 T 22-04-2016 SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS05065 3abcde55f95c1130952fb1a581a4f2bd 528 SUPERFAMILY SSF52540 9 276 2.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 Gene3D G3DSA:3.30.1300.30 284 323 8.4E-37 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 Gene3D G3DSA:3.30.1300.30 26 98 8.4E-37 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 SUPERFAMILY SSF158544 101 214 4.97E-30 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 Gene3D G3DSA:1.10.40.60 100 214 6.3E-36 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 PIRSF PIRSF002786 1 324 6.3E-76 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 PANTHER PTHR38831 1 324 1.9E-74 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 Pfam PF03934 Type II secretion system (T2SS), protein K 29 312 5.6E-89 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 SUPERFAMILY SSF158544 218 271 3.4E-16 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 SUPERFAMILY SSF54523 35 100 4.08E-34 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 SUPERFAMILY SSF54523 282 322 4.08E-34 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 PANTHER PTHR38831:SF1 1 324 1.9E-74 T 22-04-2016 SAMA_RS00890 9c8fa4dfbfe68878661dc4e3f71203bd 324 Gene3D G3DSA:1.10.40.60 219 283 3.2E-20 T 22-04-2016 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 PANTHER PTHR32234 166 605 3.9E-207 T 22-04-2016 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 PANTHER PTHR32234 4 147 3.9E-207 T 22-04-2016 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 PANTHER PTHR32234:SF0 166 605 3.9E-207 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 PANTHER PTHR32234:SF0 4 147 3.9E-207 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 203 407 5.0E-18 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 ProSitePatterns PS00194 Thioredoxin family active site. 513 531 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Gene3D G3DSA:3.40.30.10 492 602 2.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02870 037015f70c4aec456861599948c931e2 607 SUPERFAMILY SSF74863 35 147 7.85E-38 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Pfam PF13899 Thioredoxin-like 496 578 1.9E-13 T 22-04-2016 SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Pfam PF11412 Disulphide bond corrector protein DsbC 36 144 1.7E-26 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SAMA_RS02870 037015f70c4aec456861599948c931e2 607 SUPERFAMILY SSF52833 499 601 8.46E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Gene3D G3DSA:2.60.40.1250 31 148 1.0E-36 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SAMA_RS02870 037015f70c4aec456861599948c931e2 607 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 605 34.698 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Gene3D G3DSA:3.20.20.450 469 718 4.1E-94 T 22-04-2016 IPR001633 EAL domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Pfam PF00563 EAL domain 472 705 3.0E-69 T 22-04-2016 IPR001633 EAL domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 450 9.5E-21 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Pfam PF13426 PAS domain 191 290 9.4E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Gene3D G3DSA:3.30.450.20 181 290 1.7E-12 T 22-04-2016 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Gene3D G3DSA:3.30.450.40 12 175 1.5E-13 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SUPERFAMILY SSF55781 26 165 2.62E-16 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SMART SM00052 466 711 6.4E-103 T 22-04-2016 IPR001633 EAL domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 PANTHER PTHR33121 469 716 2.8E-78 T 22-04-2016 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 PANTHER PTHR33121:SF13 469 716 2.8E-78 T 22-04-2016 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SUPERFAMILY SSF55785 199 300 2.79E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Pfam PF01590 GAF domain 23 164 2.4E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SMART SM00267 291 456 4.3E-16 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SUPERFAMILY SSF141868 471 718 1.7E-85 T 22-04-2016 IPR001633 EAL domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 298 2.9E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SMART SM00065 23 174 8.6E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 449 9.6E-22 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 Gene3D G3DSA:3.30.70.270 306 459 4.7E-28 T 22-04-2016 SAMA_RS09500 c6b06ea5fe2043a10810680d3561da2b 725 SUPERFAMILY SSF55073 307 457 1.73E-26 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 SUPERFAMILY SSF53850 95 304 1.9E-35 T 22-04-2016 SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 SUPERFAMILY SSF46785 9 110 1.41E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 Pfam PF03466 LysR substrate binding domain 95 301 6.8E-39 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 PANTHER PTHR30126 9 315 1.1E-128 T 22-04-2016 SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 Gene3D G3DSA:1.10.10.10 9 94 4.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 PANTHER PTHR30126:SF5 9 315 1.1E-128 T 22-04-2016 SAMA_RS03655 8a55686bf06f98e0d948952e325e782c 325 Gene3D G3DSA:3.40.190.10 95 235 4.5E-27 T 22-04-2016 SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 PANTHER PTHR24220 7 240 7.8E-148 T 22-04-2016 SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 Gene3D G3DSA:3.40.50.300 4 237 1.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 SMART SM00382 30 233 7.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 5 243 1.4E-122 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 PANTHER PTHR24220:SF497 7 240 7.8E-148 T 22-04-2016 SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 217 238 3.2E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 SUPERFAMILY SSF52540 5 239 2.61E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16105 16360e5437ab7ca2c71e0c68ed21afa4 243 Pfam PF00005 ABC transporter 21 168 1.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 Pfam PF01470 Pyroglutamyl peptidase 7 203 1.4E-77 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PIRSF PIRSF015592 5 214 7.8E-82 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 7 214 8.7E-83 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 133 147 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PANTHER PTHR23402 7 216 1.8E-62 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 Gene3D G3DSA:3.40.630.20 7 213 4.4E-67 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 SUPERFAMILY SSF53182 6 216 3.92E-71 T 22-04-2016 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PANTHER PTHR23402:SF1 7 216 1.8E-62 T 22-04-2016 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 135 151 8.8E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 164 176 8.8E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 65 77 8.8E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 7 30 8.8E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 83 103 8.8E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SAMA_RS00080 a16d66319e3a3b0ba42980fad1ef05c1 217 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 5 203 40.163 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 SAMA_RS09880 e1a2c4af7a5cfe03e8b949fd82000e7a 604 PANTHER PTHR30441:SF4 1 596 4.1E-122 T 22-04-2016 SAMA_RS09880 e1a2c4af7a5cfe03e8b949fd82000e7a 604 Pfam PF05170 AsmA family 320 507 7.8E-30 T 22-04-2016 IPR007844 AsmA SAMA_RS09880 e1a2c4af7a5cfe03e8b949fd82000e7a 604 Pfam PF05170 AsmA family 5 171 1.7E-35 T 22-04-2016 IPR007844 AsmA SAMA_RS09880 e1a2c4af7a5cfe03e8b949fd82000e7a 604 PANTHER PTHR30441 1 596 4.1E-122 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Gene3D G3DSA:3.40.190.10 106 195 1.6E-29 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 9.0E-26 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 PANTHER PTHR21022:SF0 2 399 5.0E-156 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 SUPERFAMILY SSF55021 298 377 1.56E-19 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 SUPERFAMILY SSF48600 6 93 1.12E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Gene3D G3DSA:3.20.20.70 468 644 6.4E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 SUPERFAMILY SSF53850 107 292 3.8E-50 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Pfam PF01817 Chorismate mutase type II 11 89 2.2E-15 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 SMART SM00830 11 91 1.0E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 SUPERFAMILY SSF51569 353 656 1.98E-41 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 326 333 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 PANTHER PTHR21022 2 399 5.0E-156 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Pfam PF00793 DAHP synthetase I family 487 649 3.7E-17 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Gene3D G3DSA:1.20.59.10 1 105 1.2E-39 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Gene3D G3DSA:3.30.70.260 295 378 2.3E-25 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Gene3D G3DSA:3.40.190.10 196 274 1.6E-24 T 22-04-2016 SAMA_RS04690 0db5b7b4f8e1a8473061ff83a361006e 659 Pfam PF00800 Prephenate dehydratase 107 287 1.7E-55 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 PANTHER PTHR40980 180 940 5.3E-31 T 22-04-2016 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 SUPERFAMILY SSF56935 35 237 1.43E-90 T 22-04-2016 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 SUPERFAMILY SSF56935 544 740 1.43E-90 T 22-04-2016 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 SUPERFAMILY SSF56935 270 485 1.43E-90 T 22-04-2016 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 SUPERFAMILY SSF56935 772 939 1.43E-90 T 22-04-2016 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Gene3D G3DSA:2.170.130.10 65 162 1.6E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Pfam PF00593 TonB dependent receptor 641 939 1.4E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 939 5.4E-179 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Gene3D G3DSA:2.40.170.20 563 939 5.1E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Gene3D G3DSA:2.40.170.20 266 513 5.1E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Gene3D G3DSA:2.40.170.20 163 233 5.1E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS08675 b2a5cc5fc0ceb329769ede530625cfcb 940 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 163 1.3E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS06315 bbd068a7be11b970bcc180edfdfa1141 693 SUPERFAMILY SSF56935 283 666 5.24E-12 T 22-04-2016 SAMA_RS06315 bbd068a7be11b970bcc180edfdfa1141 693 Gene3D G3DSA:2.40.170.20 233 541 3.9E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06315 bbd068a7be11b970bcc180edfdfa1141 693 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 52 693 4.8E-198 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB SAMA_RS06315 bbd068a7be11b970bcc180edfdfa1141 693 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 60 693 9.1E-228 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB SAMA_RS06315 bbd068a7be11b970bcc180edfdfa1141 693 Gene3D G3DSA:2.40.170.20 542 669 3.5E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS11590 88ed65dc15b38ef1abf5dbe457ac6136 339 PIRSF PIRSF006470 7 339 1.3E-133 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SAMA_RS11590 88ed65dc15b38ef1abf5dbe457ac6136 339 PANTHER PTHR33376:SF7 33 338 6.7E-153 T 22-04-2016 SAMA_RS11590 88ed65dc15b38ef1abf5dbe457ac6136 339 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 40 289 2.2E-77 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SAMA_RS11590 88ed65dc15b38ef1abf5dbe457ac6136 339 PANTHER PTHR33376 33 338 6.7E-153 T 22-04-2016 SAMA_RS11590 88ed65dc15b38ef1abf5dbe457ac6136 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 322 9.3E-98 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 Gene3D G3DSA:1.10.760.10 47 163 2.3E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 PANTHER PTHR35008:SF4 26 343 1.5E-113 T 22-04-2016 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 PANTHER PTHR35008 26 343 1.5E-113 T 22-04-2016 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 223 302 1.1E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 Gene3D G3DSA:1.10.760.10 216 306 5.8E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 SUPERFAMILY SSF46626 203 313 1.6E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02815 e0f9f5a27b329e56fa968c3b014981be 352 SUPERFAMILY SSF46626 56 167 7.77E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 SUPERFAMILY SSF52172 2 137 2.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 PANTHER PTHR26402:SF495 240 249 3.0E-53 T 22-04-2016 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 PANTHER PTHR26402:SF495 5 136 3.0E-53 T 22-04-2016 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 286 2.6E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 SMART SM00448 5 118 1.6E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 SUPERFAMILY SSF55073 140 291 5.26E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 SMART SM00267 124 291 2.8E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 Gene3D G3DSA:3.30.70.270 136 293 9.1E-48 T 22-04-2016 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 Gene3D G3DSA:3.40.50.2300 2 132 1.0E-39 T 22-04-2016 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 290 1.8E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 PANTHER PTHR26402 240 249 3.0E-53 T 22-04-2016 SAMA_RS00330 111721f6ed70b9ee42ca8ba20f7f6009 305 PANTHER PTHR26402 5 136 3.0E-53 T 22-04-2016 SAMA_RS01610 0c7d13779ac4d641a4546702e1113dd4 321 Pfam PF01112 Asparaginase 45 308 5.4E-82 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SAMA_RS01610 0c7d13779ac4d641a4546702e1113dd4 321 SUPERFAMILY SSF56235 32 309 9.83E-91 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS01610 0c7d13779ac4d641a4546702e1113dd4 321 PANTHER PTHR10188:SF23 1 312 5.0E-136 T 22-04-2016 SAMA_RS01610 0c7d13779ac4d641a4546702e1113dd4 321 PANTHER PTHR10188 1 312 5.0E-136 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 Gene3D G3DSA:3.40.50.1970 3 183 8.0E-60 T 22-04-2016 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 2.8E-128 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 Gene3D G3DSA:1.20.1090.10 184 381 9.7E-79 T 22-04-2016 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 PANTHER PTHR11496 5 382 4.8E-219 T 22-04-2016 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 SUPERFAMILY SSF56796 5 380 4.71E-134 T 22-04-2016 SAMA_RS12820 a69da8a01f9ef19f6e042431cebb7d7b 382 PANTHER PTHR11496:SF78 5 382 4.8E-219 T 22-04-2016 SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 294 8.0E-74 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 Pfam PF00999 Sodium/hydrogen exchanger family 10 381 1.6E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 Pfam PF02254 TrkA-N domain 413 527 1.8E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 Gene3D G3DSA:3.40.50.720 408 539 1.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 SUPERFAMILY SSF51735 412 540 3.76E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 PANTHER PTHR16254:SF6 4 568 5.1E-199 T 22-04-2016 SAMA_RS07255 daee007a9be806f236b6383fc9603c3a 641 PANTHER PTHR16254 4 568 5.1E-199 T 22-04-2016 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 Gene3D G3DSA:3.30.700.10 9 75 5.4E-8 T 22-04-2016 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 Pfam PF08334 Type II secretion system (T2SS), protein G 31 137 1.4E-36 T 22-04-2016 IPR013545 Type II secretion system protein G SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 28 1.1E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 PANTHER PTHR30093 1 142 1.2E-71 T 22-04-2016 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 PANTHER PTHR30093:SF9 1 142 1.2E-71 T 22-04-2016 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 2.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 2.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 SUPERFAMILY SSF54523 35 139 4.81E-36 T 22-04-2016 SAMA_RS00870 c3133fe5379936d5525dce7a9c346ddd 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 138 1.2E-54 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SAMA_RS18110 22476bfdc3b1c255261b5506edcfa514 168 PANTHER PTHR35369:SF1 1 154 5.7E-43 T 22-04-2016 SAMA_RS18110 22476bfdc3b1c255261b5506edcfa514 168 SUPERFAMILY SSF52540 32 141 3.66E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18110 22476bfdc3b1c255261b5506edcfa514 168 PANTHER PTHR35369 1 154 5.7E-43 T 22-04-2016 SAMA_RS18110 22476bfdc3b1c255261b5506edcfa514 168 Gene3D G3DSA:3.40.50.300 32 140 2.5E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18110 22476bfdc3b1c255261b5506edcfa514 168 Pfam PF03846 Cell division inhibitor SulA 40 114 1.1E-10 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 PRINTS PR01011 Glutathione peroxidase family signature 123 132 5.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 PRINTS PR01011 Glutathione peroxidase family signature 57 73 5.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 PRINTS PR01011 Glutathione peroxidase family signature 22 39 5.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 PIRSF PIRSF000303 1 163 9.3E-69 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 Gene3D G3DSA:3.40.30.10 3 160 4.9E-75 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 PANTHER PTHR11592 1 162 2.6E-93 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 SUPERFAMILY SSF52833 3 160 3.39E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05660 78069a68dc0adfd45b5e84528c79b5b4 164 Pfam PF00255 Glutathione peroxidase 4 111 2.1E-43 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 SMART SM01001 3 154 3.4E-102 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 2.8E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 Gene3D G3DSA:3.40.50.7700 3 159 1.1E-73 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 PIRSF PIRSF001338 1 162 1.3E-66 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 Pfam PF00731 AIR carboxylase 5 152 6.5E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 PANTHER PTHR23046:SF2 1 162 5.0E-86 T 22-04-2016 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.695 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 SUPERFAMILY SSF52255 4 161 2.35E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SAMA_RS05580 9aa237fb63bf4df9e526fe01c6003741 163 PANTHER PTHR23046 1 162 5.0E-86 T 22-04-2016 SAMA_RS02620 65dbd0392c710d47a740d199b6d91cba 295 SUPERFAMILY SSF55486 82 276 1.82E-29 T 22-04-2016 SAMA_RS02620 65dbd0392c710d47a740d199b6d91cba 295 Gene3D G3DSA:3.40.390.10 112 281 2.3E-12 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS02620 65dbd0392c710d47a740d199b6d91cba 295 PANTHER PTHR19325 124 284 1.2E-49 T 22-04-2016 SAMA_RS02620 65dbd0392c710d47a740d199b6d91cba 295 PANTHER PTHR19325:SF359 124 284 1.2E-49 T 22-04-2016 SAMA_RS02620 65dbd0392c710d47a740d199b6d91cba 295 Pfam PF05572 Pregnancy-associated plasma protein-A 168 285 1.4E-14 T 22-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 PANTHER PTHR30005 1 301 4.4E-133 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 Gene3D G3DSA:3.30.420.150 128 301 5.8E-46 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 SUPERFAMILY SSF53067 6 126 1.42E-28 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 Gene3D G3DSA:3.30.420.40 2 127 8.7E-33 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 PANTHER PTHR30005:SF2 1 301 4.4E-133 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 SUPERFAMILY SSF53067 131 302 6.01E-41 T 22-04-2016 SAMA_RS16740 5a7ac9cb1d8fb38bc6392a2e837bd681 305 Pfam PF02541 Ppx/GppA phosphatase family 20 301 4.1E-69 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 SUPERFAMILY SSF109604 132 316 3.71E-42 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 PANTHER PTHR26402:SF495 241 321 2.0E-55 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 PANTHER PTHR26402:SF495 6 136 2.0E-55 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 Gene3D G3DSA:1.10.3210.10 132 316 3.2E-25 T 22-04-2016 IPR006674 HD domain SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 PANTHER PTHR26402 241 321 2.0E-55 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 PANTHER PTHR26402 6 136 2.0E-55 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 Gene3D G3DSA:3.40.50.2300 5 126 1.2E-41 T 22-04-2016 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 SMART SM00471 148 285 1.1E-8 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 SMART SM00448 6 118 5.1E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 Pfam PF01966 HD domain 155 275 2.6E-17 T 22-04-2016 IPR006674 HD domain SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 SUPERFAMILY SSF52172 5 128 7.26E-39 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16225 d37f660d9209e3466c90194b96c89077 328 Pfam PF00072 Response regulator receiver domain 8 118 1.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 SMART SM00363 11 74 1.7E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 SUPERFAMILY SSF55174 10 107 6.02E-28 T 22-04-2016 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 Pfam PF01479 S4 domain 11 55 3.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 PANTHER PTHR11079 9 111 7.0E-25 T 22-04-2016 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 Gene3D G3DSA:3.10.290.10 8 105 4.7E-36 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 PANTHER PTHR11079:SF70 9 111 7.0E-25 T 22-04-2016 SAMA_RS00845 7308741c094631ebefc95deb37bff70b 134 PIRSF PIRSF016821 8 134 9.7E-39 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 SUPERFAMILY SSF52540 289 520 2.87E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 499 508 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Gene3D G3DSA:1.10.10.60 554 599 2.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Gene3D G3DSA:3.40.50.300 291 459 5.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Pfam PF01590 GAF domain 81 183 1.4E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 SUPERFAMILY SSF46689 567 600 2.37E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 PANTHER PTHR32071:SF5 291 599 8.5E-121 T 22-04-2016 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Pfam PF02954 Bacterial regulatory protein, Fis family 567 599 1.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 311 324 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 SMART SM00382 307 450 7.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Gene3D G3DSA:1.10.8.60 461 531 2.9E-13 T 22-04-2016 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 Pfam PF00158 Sigma-54 interaction domain 290 453 5.0E-59 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS17865 bf2db1391f71581fd8577a7dbdd12c91 602 PANTHER PTHR32071 291 599 8.5E-121 T 22-04-2016 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 SUPERFAMILY SSF58104 341 648 7.67E-66 T 22-04-2016 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 SMART SM00283 387 648 7.5E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 Pfam PF02743 Cache domain 55 280 1.0E-20 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 Gene3D G3DSA:3.30.450.20 168 294 6.3E-21 T 22-04-2016 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 SMART SM00304 318 372 0.014 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 SMART SM00304 414 467 43.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 647 1.2E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 Gene3D G3DSA:1.10.287.950 402 616 6.8E-51 T 22-04-2016 SAMA_RS02940 81c51f978b198328255e3b5d91731f05 649 PANTHER PTHR32089 27 649 7.0E-106 T 22-04-2016 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 182 3.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 3.7E-29 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 SUPERFAMILY SSF56784 6 217 1.63E-58 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PANTHER PTHR18901:SF34 1 217 9.7E-69 T 22-04-2016 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 Gene3D G3DSA:3.40.50.1000 93 218 2.6E-42 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 Gene3D G3DSA:3.40.50.1000 4 19 2.6E-42 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 5.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 5.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 5.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 5.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 187 2.2E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 PANTHER PTHR18901 1 217 9.7E-69 T 22-04-2016 SAMA_RS02070 a8611de0cf6a82bea1c573da14785214 221 Gene3D G3DSA:1.10.150.240 20 88 3.0E-27 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SAMA_RS03905 51bc811e1ab447ad69d1541f4b732c9a 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 116 1.4E-14 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS03905 51bc811e1ab447ad69d1541f4b732c9a 139 PANTHER PTHR33337 5 131 3.6E-28 T 22-04-2016 SAMA_RS03905 51bc811e1ab447ad69d1541f4b732c9a 139 PANTHER PTHR33337:SF11 5 131 3.6E-28 T 22-04-2016 SAMA_RS03905 51bc811e1ab447ad69d1541f4b732c9a 139 SUPERFAMILY SSF51316 6 133 3.66E-38 T 22-04-2016 IPR011057 Mss4-like SAMA_RS03905 51bc811e1ab447ad69d1541f4b732c9a 139 Gene3D G3DSA:3.90.1590.10 4 134 3.3E-35 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 SUPERFAMILY SSF46785 4 88 5.17E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 Pfam PF03466 LysR substrate binding domain 90 292 3.8E-43 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 Gene3D G3DSA:1.10.10.10 3 89 6.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 Gene3D G3DSA:3.40.190.10 91 176 1.1E-15 T 22-04-2016 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 PANTHER PTHR30419 1 292 2.9E-111 T 22-04-2016 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 SUPERFAMILY SSF53850 92 294 9.42E-41 T 22-04-2016 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 Gene3D G3DSA:3.40.190.10 177 262 7.0E-23 T 22-04-2016 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 PANTHER PTHR30419:SF8 1 292 2.9E-111 T 22-04-2016 SAMA_RS03115 d4a394d1a186d7bc0daaf97ff94730c9 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 Pfam PF12833 Helix-turn-helix domain 31 108 2.8E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 SMART SM00342 23 107 2.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 SMART SM00871 134 288 7.1E-34 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 SUPERFAMILY SSF46689 6 56 1.08E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 Gene3D G3DSA:1.10.10.60 60 119 4.0E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 Gene3D G3DSA:1.10.10.60 6 59 1.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 PANTHER PTHR40055 26 287 2.5E-51 T 22-04-2016 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 SUPERFAMILY SSF55136 134 287 3.56E-30 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 Pfam PF06445 GyrI-like small molecule binding domain 134 287 2.6E-24 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 SUPERFAMILY SSF46689 60 114 1.16E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 5.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 5.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 PANTHER PTHR40055:SF1 26 287 2.5E-51 T 22-04-2016 SAMA_RS00385 42a761cf1ac4a4b960371aad7555077e 288 Gene3D G3DSA:3.20.80.10 134 287 2.7E-38 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 SUPERFAMILY SSF52540 1 358 3.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 PANTHER PTHR32182:SF0 1 360 6.6E-66 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 PANTHER PTHR32182 1 360 6.6E-66 T 22-04-2016 SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 Gene3D G3DSA:3.40.50.300 230 337 8.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 Gene3D G3DSA:3.40.50.300 1 171 8.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 94.768 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 4.1E-103 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 336 1.7E-29 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SAMA_RS00065 6810defb9933a153d12265a5a5f65c43 360 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Gene3D G3DSA:3.20.20.60 3 73 8.8E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Gene3D G3DSA:3.20.20.60 170 329 8.8E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 248 272 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 317 333 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 298 316 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 273 297 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PRINTS PR01050 Pyruvate kinase family signature 221 247 2.16E-50 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 6.0E-126 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Gene3D G3DSA:2.40.33.10 74 168 2.6E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PANTHER PTHR11817:SF17 1 477 3.1E-296 T 22-04-2016 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Gene3D G3DSA:3.40.1380.20 330 477 9.3E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 2.1E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 SUPERFAMILY SSF50800 71 167 1.41E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 8.0E-162 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 PANTHER PTHR11817 1 477 3.1E-296 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 SUPERFAMILY SSF51621 169 343 1.69E-84 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 SUPERFAMILY SSF51621 2 76 1.69E-84 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS09465 57c22e34440126daddfea2ddbb02c04d 479 SUPERFAMILY SSF52935 327 478 2.22E-37 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 6 88 1.7E-26 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 790 4.8E-142 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Gene3D G3DSA:2.70.150.10 272 407 3.5E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 SUPERFAMILY SSF56784 504 524 7.76E-48 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 SUPERFAMILY SSF56784 558 788 7.76E-48 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 ProSitePatterns PS01047 Heavy-metal-associated domain. 98 127 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 ProSitePatterns PS01229 Hypothetical cof family signature 2. 688 710 - T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 281 772 1.4E-73 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PANTHER PTHR24093:SF50 86 795 1.7E-185 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 792 4.3E-116 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 SUPERFAMILY SSF81653 311 407 9.94E-24 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 SUPERFAMILY SSF55008 89 164 9.29E-20 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 790 1.2E-152 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Pfam PF00403 Heavy-metal-associated domain 95 155 8.7E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Pfam PF00702 haloacid dehalogenase-like hydrolase 502 702 8.0E-31 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 1.3E-17 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 1.3E-17 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 1.3E-17 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 723 1.3E-17 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Gene3D G3DSA:3.40.50.1000 608 757 4.5E-47 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Gene3D G3DSA:3.40.50.1000 479 522 4.5E-47 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Pfam PF00122 E1-E2 ATPase 280 497 6.0E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 PANTHER PTHR24093 86 795 1.7E-185 T 22-04-2016 SAMA_RS09365 a1951a273c9eec8f60f98e8d779035be 795 Gene3D G3DSA:3.30.70.100 91 160 2.1E-18 T 22-04-2016 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 406 6.4E-154 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 Gene3D G3DSA:3.90.1150.10 282 402 2.3E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 Pfam PF00266 Aminotransferase class-V 23 396 4.7E-135 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 PANTHER PTHR11601 4 407 4.4E-169 T 22-04-2016 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 PANTHER PTHR11601:SF17 4 407 4.4E-169 T 22-04-2016 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 Gene3D G3DSA:3.40.640.10 34 281 4.6E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS14520 143d8ed30be9fcb1d29cd771cc52125c 409 SUPERFAMILY SSF53383 2 405 9.31E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 SUPERFAMILY SSF109998 27 203 1.65E-39 T 22-04-2016 IPR027304 Trigger factor/SurA domain SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 SUPERFAMILY SSF54534 175 278 1.44E-23 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 SUPERFAMILY SSF54534 284 385 3.27E-31 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 PANTHER PTHR10657 7 426 8.8E-124 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Gene3D G3DSA:3.10.50.40 286 402 5.7E-33 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Gene3D G3DSA:3.10.50.40 170 285 1.5E-24 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Pfam PF09312 SurA N-terminal domain 27 143 3.9E-37 T 22-04-2016 IPR015391 SurA N-terminal SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Pfam PF00639 PPIC-type PPIASE domain 180 273 1.9E-17 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Pfam PF00639 PPIC-type PPIASE domain 290 382 3.4E-24 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 PANTHER PTHR10657:SF15 7 426 8.8E-124 T 22-04-2016 SAMA_RS14720 20a842d143adc6f04f4e3ead087fdbbe 434 Hamap MF_01183 Chaperone SurA [surA]. 8 429 33.277 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.233 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 PANTHER PTHR21327 1 365 1.7E-168 T 22-04-2016 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 SUPERFAMILY SSF55821 2 202 2.24E-88 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 1.2E-76 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 PANTHER PTHR21327:SF6 1 365 1.7E-168 T 22-04-2016 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 PIRSF PIRSF001259 1 367 2.8E-132 T 22-04-2016 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.8E-85 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 Pfam PF00925 GTP cyclohydrolase II 208 365 3.3E-42 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 SUPERFAMILY SSF142695 205 366 3.27E-49 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS05310 734daef0d8fc265bf576eca232caca6c 368 Gene3D G3DSA:3.90.870.10 2 210 1.6E-100 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 PANTHER PTHR10516 37 156 1.2E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 65 153 2.2E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 PANTHER PTHR10516:SF320 37 156 1.2E-50 T 22-04-2016 SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 Gene3D G3DSA:3.10.50.40 22 156 8.8E-51 T 22-04-2016 SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 57 5.2E-11 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS03635 7acce8fff4890fc67d6da2e75fd663f7 156 SUPERFAMILY SSF54534 22 155 5.11E-48 T 22-04-2016 SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 61 724 2.6E-119 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 SUPERFAMILY SSF48695 223 385 1.24E-36 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 SUPERFAMILY SSF48695 557 719 1.24E-36 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 Gene3D G3DSA:3.90.10.10 316 380 2.8E-13 T 22-04-2016 SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 Gene3D G3DSA:3.90.10.10 200 259 2.8E-13 T 22-04-2016 SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 Gene3D G3DSA:3.90.10.10 624 721 4.5E-12 T 22-04-2016 SAMA_RS06330 6aa22d7dfa6f8083cf7fd05fabfd75ed 729 Gene3D G3DSA:3.90.10.10 562 587 4.5E-12 T 22-04-2016 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 SUPERFAMILY SSF54534 36 114 1.12E-16 T 22-04-2016 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 PANTHER PTHR30437 1 121 4.5E-57 T 22-04-2016 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 Pfam PF14760 Rnk N-terminus 1 30 1.2E-7 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 Gene3D G3DSA:1.10.286.20 1 30 1.7E-10 T 22-04-2016 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 PANTHER PTHR30437:SF5 1 121 4.5E-57 T 22-04-2016 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 37 113 1.5E-17 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS07460 f203ec496dfc1679a9508e437278abbb 123 Gene3D G3DSA:3.10.50.30 34 123 4.0E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Gene3D G3DSA:3.40.50.300 4 130 1.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Gene3D G3DSA:3.40.50.300 201 267 1.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.2E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Gene3D G3DSA:1.10.150.300 131 200 1.6E-27 T 22-04-2016 IPR023192 TGS-like domain SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PIRSF PIRSF006641 1 363 2.1E-158 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PANTHER PTHR23305 1 363 1.5E-211 T 22-04-2016 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 SUPERFAMILY SSF52540 3 299 8.93E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.9E-171 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.9E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 SUPERFAMILY SSF81271 279 359 3.49E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.637 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SAMA_RS13435 fbe1e95e3480f0bfb9ddd72c7287a52c 363 Gene3D G3DSA:3.10.20.30 268 363 4.2E-49 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 PANTHER PTHR10192:SF11 7 412 2.6E-205 T 22-04-2016 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Pfam PF00994 Probable molybdopterin binding domain 198 323 3.3E-28 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 PANTHER PTHR10192 7 412 2.6E-205 T 22-04-2016 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Gene3D G3DSA:3.40.980.10 171 338 3.6E-67 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 SMART SM00852 187 324 1.4E-44 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Gene3D G3DSA:2.40.340.10 339 405 2.9E-27 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 SUPERFAMILY SSF63882 10 182 5.49E-56 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 SUPERFAMILY SSF63867 334 412 3.14E-23 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 SUPERFAMILY SSF53218 184 329 2.36E-45 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Gene3D G3DSA:2.170.190.11 56 136 7.4E-31 T 22-04-2016 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Pfam PF03454 MoeA C-terminal region (domain IV) 338 408 2.2E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Gene3D G3DSA:3.90.105.10 137 170 6.6E-20 T 22-04-2016 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 15 174 5.6E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00700 9835dbacf563b8486c5429768f08be64 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 318 1.9E-33 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS02615 ce29ad12c5e9cbab22d7487fb8ada309 165 PANTHER PTHR23091:SF187 1 165 3.0E-68 T 22-04-2016 SAMA_RS02615 ce29ad12c5e9cbab22d7487fb8ada309 165 SUPERFAMILY SSF55729 11 164 1.68E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS02615 ce29ad12c5e9cbab22d7487fb8ada309 165 Pfam PF13420 Acetyltransferase (GNAT) domain 17 155 4.1E-19 T 22-04-2016 SAMA_RS02615 ce29ad12c5e9cbab22d7487fb8ada309 165 Gene3D G3DSA:3.40.630.30 11 164 4.1E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS02615 ce29ad12c5e9cbab22d7487fb8ada309 165 PANTHER PTHR23091 1 165 3.0E-68 T 22-04-2016 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 Pfam PF00072 Response regulator receiver domain 5 114 9.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 PANTHER PTHR26402:SF548 3 236 3.4E-74 T 22-04-2016 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 PANTHER PTHR26402 3 236 3.4E-74 T 22-04-2016 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 Gene3D G3DSA:3.40.50.2300 2 124 8.8E-33 T 22-04-2016 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 Gene3D G3DSA:1.10.10.10 133 234 3.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 SMART SM00448 3 113 9.8E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 SUPERFAMILY SSF46894 133 233 5.1E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 SUPERFAMILY SSF52172 2 123 3.84E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS00785 baebce9c0a3a468b22d085de549fd50f 237 SMART SM00862 155 231 2.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.225 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 SUPERFAMILY SSF143800 2 77 4.51E-30 T 22-04-2016 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.1E-28 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 PANTHER PTHR13528 1 70 8.2E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 Pfam PF00830 Ribosomal L28 family 3 62 7.6E-27 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SAMA_RS01760 0824b3bbd8176fccf9d44a4fc3b1cd73 78 Gene3D G3DSA:2.30.170.40 2 78 3.9E-36 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PIRSF PIRSF037119 1 786 1.6E-222 T 22-04-2016 IPR017116 Signal transduction histidine kinase, PgtB SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 Gene3D G3DSA:1.10.287.130 566 630 8.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 SMART SM00387 677 785 3.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 Gene3D G3DSA:3.30.565.10 639 772 1.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 730 3.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 763 3.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 744 3.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 Pfam PF00672 HAMP domain 327 391 2.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 677 767 1.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 SUPERFAMILY SSF55874 633 781 6.29E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 SUPERFAMILY SSF47384 562 631 6.47E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 631 2.6E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 SMART SM00388 566 634 6.7E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423:SF485 543 768 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423:SF485 241 260 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423:SF485 33 73 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423:SF485 398 510 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423 543 768 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423 241 260 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423 33 73 5.1E-71 T 22-04-2016 SAMA_RS16880 287b190fb2a344ea22bc4939d3428032 787 PANTHER PTHR24423 398 510 5.1E-71 T 22-04-2016 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 SUPERFAMILY SSF102114 105 329 2.35E-14 T 22-04-2016 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 PANTHER PTHR30544:SF5 1 373 3.7E-201 T 22-04-2016 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 73.916 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 Gene3D G3DSA:3.20.20.70 106 326 6.7E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 357 2.9E-162 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 Pfam PF04055 Radical SAM superfamily 109 278 8.3E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 PANTHER PTHR30544 1 373 3.7E-201 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS12385 5d4c1fa8e9776f55b4300c95153bfe00 373 PIRSF PIRSF006004 3 366 2.1E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 Pfam PF07650 KH domain 38 111 6.6E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.9E-98 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 Gene3D G3DSA:3.30.1140.32 108 207 1.0E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 SMART SM00322 60 125 1.7E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.428 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 PANTHER PTHR11760:SF19 2 230 6.1E-150 T 22-04-2016 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.2E-41 T 22-04-2016 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 SUPERFAMILY SSF54814 2 106 2.88E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 Gene3D G3DSA:3.30.300.20 18 107 1.1E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 SUPERFAMILY SSF54821 108 206 1.7E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01155 793ed88d74e972ca0d143b6020e10f03 230 PANTHER PTHR11760 2 230 6.1E-150 T 22-04-2016 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 Pfam PF00297 Ribosomal protein L3 102 185 7.9E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 Gene3D G3DSA:4.10.960.10 78 160 1.3E-32 T 22-04-2016 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.2E-90 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 PANTHER PTHR11229 3 211 1.9E-122 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 39.99 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 SUPERFAMILY SSF50447 1 211 1.77E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 Gene3D G3DSA:2.40.30.10 161 210 2.0E-10 T 22-04-2016 SAMA_RS01125 3cb2dadd880a819f18eb36c2282dab54 212 Gene3D G3DSA:2.40.30.10 4 33 2.0E-10 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 Pfam PF00326 Prolyl oligopeptidase family 736 912 2.8E-24 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 PANTHER PTHR11731:SF142 119 346 5.7E-177 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 PANTHER PTHR11731 119 346 5.7E-177 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 Gene3D G3DSA:2.120.10.60 428 482 1.3E-13 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 Gene3D G3DSA:2.120.10.60 177 325 1.3E-13 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 Gene3D G3DSA:2.120.10.60 20 87 1.3E-13 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 SUPERFAMILY SSF53474 656 912 2.55E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 Gene3D G3DSA:3.40.50.1820 656 913 3.6E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 PANTHER PTHR11731 570 923 5.7E-177 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 PANTHER PTHR11731:SF142 570 923 5.7E-177 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 SUPERFAMILY SSF82171 401 632 5.49E-12 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 SUPERFAMILY SSF82171 347 358 5.49E-12 T 22-04-2016 SAMA_RS12655 99da936115cba65bd2f5c9b21df422a4 933 SUPERFAMILY SSF82171 182 320 5.49E-12 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82693 38 127 1.38E-18 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Gene3D G3DSA:3.30.2090.10 183 266 1.4E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Gene3D G3DSA:3.30.70.1430 38 130 6.5E-21 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82714 706 790 2.09E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Gene3D G3DSA:1.20.1640.10 292 496 7.8E-44 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.5E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Gene3D G3DSA:3.30.2090.10 706 789 1.6E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82693 138 181 9.42E-8 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82693 269 323 9.42E-8 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PANTHER PTHR32063 1 1011 0.0 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82866 791 1011 9.94E-37 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82714 184 265 3.79E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Gene3D G3DSA:1.10.3850.10 797 1010 1.2E-39 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 Pfam PF00873 AcrB/AcrD/AcrF family 1 1008 1.3E-142 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 SUPERFAMILY SSF82866 296 486 1.44E-35 T 22-04-2016 SAMA_RS12260 94c308a6feb9c57543406ec9c6726a82 1022 PANTHER PTHR32063:SF22 1 1011 0.0 T 22-04-2016 SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 SUPERFAMILY SSF54106 34 82 1.28E-7 T 22-04-2016 IPR018392 LysM domain SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 PANTHER PTHR34700 1 348 3.6E-84 T 22-04-2016 SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 Gene3D G3DSA:3.10.350.10 34 82 2.4E-8 T 22-04-2016 IPR018392 LysM domain SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 PANTHER PTHR34700:SF2 1 348 3.6E-84 T 22-04-2016 SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 Pfam PF01476 LysM domain 36 81 1.4E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS00210 8288c577f03ddd4bb70908d635000b55 367 SMART SM00257 35 83 5.2E-7 T 22-04-2016 IPR018392 LysM domain SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 PANTHER PTHR24960:SF45 4 396 2.0E-195 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 473 1.7E-177 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Gene3D G3DSA:2.60.40.10 361 474 2.0E-35 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 SUPERFAMILY SSF54862 108 136 7.53E-32 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 SUPERFAMILY SSF54862 176 351 7.53E-32 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Gene3D G3DSA:1.10.1060.10 226 283 7.1E-7 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Gene3D G3DSA:3.30.70.20 284 313 2.1E-5 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Pfam PF13746 4Fe-4S dicluster domain 222 327 4.3E-41 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 474 2.9E-32 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 PANTHER PTHR24960 4 396 2.0E-195 T 22-04-2016 SAMA_RS18895 99266c64bfa73cdc46ab0491bec0f6f0 474 Pfam PF12801 4Fe-4S binding domain 98 139 9.6E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 SUPERFAMILY SSF50129 1 95 6.0E-30 T 22-04-2016 IPR011032 GroES-like SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 PANTHER PTHR10772 1 96 1.4E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.5E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.5E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.5E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.5E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 2.7E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 Gene3D G3DSA:2.30.33.40 1 95 1.3E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 SMART SM00883 2 95 7.3E-49 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS16300 c73b9e200b354d344d784e5b2dbf3e8f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.933 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 Pfam PF12693 GspL periplasmic domain 240 395 5.6E-45 T 22-04-2016 IPR025691 GspL periplasmic domain SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 Pfam PF05134 Type II secretion system (T2SS), protein L 5 236 2.5E-70 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 395 2.8E-110 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 PIRSF PIRSF015761 11 396 3.4E-48 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 SUPERFAMILY SSF53067 147 234 6.21E-21 T 22-04-2016 SAMA_RS00895 f0cd9b9096d62d9fc5f2ca78dc9bc898 396 SUPERFAMILY SSF53067 2 144 2.85E-43 T 22-04-2016 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 Gene3D G3DSA:3.40.830.10 4 256 2.4E-92 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 PANTHER PTHR30096 6 253 4.8E-93 T 22-04-2016 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 250 1.7E-33 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 PIRSF PIRSF006157 1 257 2.6E-87 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 SUPERFAMILY SSF53213 6 255 5.23E-87 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SAMA_RS02210 49799b238bcf0ad468b7ce3cef1b7cca 257 PANTHER PTHR30096:SF0 6 253 4.8E-93 T 22-04-2016 SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 SUPERFAMILY SSF53850 125 289 7.6E-13 T 22-04-2016 SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 Pfam PF03466 LysR substrate binding domain 133 305 2.4E-7 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 Gene3D G3DSA:1.10.10.10 3 86 2.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 Gene3D G3DSA:3.40.190.10 173 255 1.1E-5 T 22-04-2016 SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 SUPERFAMILY SSF46785 7 86 1.09E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 65 2.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15140 021a966d0dcde98809cc24fcd01bacf3 327 PANTHER PTHR30118 1 260 1.4E-29 T 22-04-2016 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 PIRSF PIRSF000876 1 339 5.8E-131 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 SUPERFAMILY SSF52172 1 107 3.56E-30 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 SUPERFAMILY SSF52738 152 338 2.22E-66 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 Gene3D G3DSA:3.40.50.180 149 337 2.6E-75 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 SMART SM00448 2 114 4.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 PANTHER PTHR24421:SF21 1 328 1.7E-132 T 22-04-2016 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 Gene3D G3DSA:3.40.50.2300 1 129 1.7E-31 T 22-04-2016 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 PANTHER PTHR24421 1 328 1.7E-132 T 22-04-2016 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 337 39.597 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 Pfam PF00072 Response regulator receiver domain 4 111 2.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18195 d34fde2434ca28c0aa542ee99e098673 339 Pfam PF01339 CheB methylesterase 154 332 2.4E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 381 1.8E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 SUPERFAMILY SSF55073 231 384 2.43E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 PANTHER PTHR10799 152 381 3.9E-26 T 22-04-2016 SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 SMART SM00267 215 386 3.5E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 Gene3D G3DSA:3.30.70.270 228 384 3.1E-50 T 22-04-2016 SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 PANTHER PTHR10799:SF710 152 381 3.9E-26 T 22-04-2016 SAMA_RS18385 3b9b95f8e0a2beaf3009a6ed87dc4b95 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 384 1.9E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15930 4238b06f580cceae48de0cbc934f64a3 159 Pfam PF04314 Protein of unknown function (DUF461) 32 139 4.3E-33 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SAMA_RS15930 4238b06f580cceae48de0cbc934f64a3 159 SUPERFAMILY SSF110087 4 148 5.36E-42 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SAMA_RS15930 4238b06f580cceae48de0cbc934f64a3 159 PANTHER PTHR36302:SF1 13 157 1.7E-34 T 22-04-2016 SAMA_RS15930 4238b06f580cceae48de0cbc934f64a3 159 PANTHER PTHR36302 13 157 1.7E-34 T 22-04-2016 SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 PANTHER PTHR35399 12 686 7.3E-239 T 22-04-2016 SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 Gene3D G3DSA:2.120.10.30 167 263 1.4E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 Gene3D G3DSA:2.120.10.30 534 638 1.4E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 Gene3D G3DSA:2.120.10.30 482 500 1.4E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 SUPERFAMILY SSF63829 606 650 5.17E-7 T 22-04-2016 SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 SUPERFAMILY SSF63829 419 579 5.17E-7 T 22-04-2016 SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 Pfam PF05787 Bacterial protein of unknown function (DUF839) 81 649 4.1E-151 T 22-04-2016 IPR008557 Protein of unknown function DUF839 SAMA_RS09120 98e91c357791b54c9ba93dcbb2f27750 686 PANTHER PTHR35399:SF2 12 686 7.3E-239 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 Gene3D G3DSA:3.30.70.20 101 146 2.1E-6 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 13 218 1.1E-78 T 22-04-2016 IPR004494 MauM/NapG ferredoxin-type protein SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 PANTHER PTHR30176 4 241 2.3E-94 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 Gene3D G3DSA:3.30.70.20 147 201 1.1E-10 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 Gene3D G3DSA:1.10.1060.10 46 100 2.8E-11 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 Pfam PF12838 4Fe-4S dicluster domain 63 118 1.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 Pfam PF12838 4Fe-4S dicluster domain 149 199 4.4E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 PANTHER PTHR30176:SF3 4 241 2.3E-94 T 22-04-2016 SAMA_RS15570 af423b6eb1aeb36061925a5f7167816a 241 SUPERFAMILY SSF54862 61 207 1.0E-24 T 22-04-2016 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 148 1.0E-24 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 PANTHER PTHR21708:SF24 1 298 1.7E-71 T 22-04-2016 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 PANTHER PTHR21708 1 298 1.7E-71 T 22-04-2016 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 SUPERFAMILY SSF48179 175 298 4.76E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 Gene3D G3DSA:3.40.50.720 2 183 8.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 175 297 1.2E-37 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 298 6.9E-69 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 Gene3D G3DSA:1.10.1040.10 184 299 5.3E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS13345 56ef81b906cb26c6d7676d16407e5df3 300 SUPERFAMILY SSF51735 3 172 4.96E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 SUPERFAMILY SSF53335 20 243 4.14E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 4 243 41.012 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 243 5.8E-98 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 PIRSF PIRSF006325 2 243 6.8E-102 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 Gene3D G3DSA:3.40.50.150 20 243 1.4E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 PANTHER PTHR10108 1 242 7.9E-93 T 22-04-2016 SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 PANTHER PTHR10108:SF809 1 242 7.9E-93 T 22-04-2016 SAMA_RS09660 c61bfd424eb7f3ee8a00f94089a14735 243 Pfam PF13649 Methyltransferase domain 61 159 3.0E-13 T 22-04-2016 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 SUPERFAMILY SSF100950 5 216 5.86E-73 T 22-04-2016 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 Gene3D G3DSA:3.40.810.20 4 213 1.7E-88 T 22-04-2016 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 Pfam PF01144 Coenzyme A transferase 6 201 4.2E-41 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 SMART SM00882 6 202 5.0E-71 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 4.9E-98 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 SAMA_RS02775 904c1b373e8e0b22812c473257685c4e 221 PANTHER PTHR13707 5 218 1.6E-115 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 772 2.5E-170 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 SUPERFAMILY SSF53955 43 255 5.34E-76 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Gene3D G3DSA:2.40.50.140 347 420 3.9E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282 420 611 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282 2 311 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 724 1.9E-21 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Pfam PF17092 Penicillin-binding protein OB-like domain 317 424 7.2E-28 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282:SF5 758 833 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Pfam PF00912 Transglycosylase 55 229 8.8E-62 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282 656 741 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282:SF5 420 611 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282:SF5 2 311 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282:SF5 656 741 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 PANTHER PTHR32282 758 833 4.4E-273 T 22-04-2016 SAMA_RS17560 6737ea910c3e2339102a999343273829 846 SUPERFAMILY SSF56601 211 233 2.14E-117 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 SUPERFAMILY SSF56601 421 609 2.14E-117 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 SUPERFAMILY SSF56601 262 314 2.14E-117 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 SUPERFAMILY SSF56601 656 826 2.14E-117 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Gene3D G3DSA:3.40.710.10 232 314 1.1E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Gene3D G3DSA:3.40.710.10 421 612 1.1E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Gene3D G3DSA:3.40.710.10 657 826 1.1E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS17560 6737ea910c3e2339102a999343273829 846 Gene3D G3DSA:1.10.3810.10 55 231 2.1E-70 T 22-04-2016 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 SUPERFAMILY SSF55120 3 332 2.88E-100 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 335 29.123 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 PANTHER PTHR13326 1 330 1.4E-83 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 74 87 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 183 330 4.7E-24 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05420 d84cc69bcab07f3a08dba1d8901a0e75 360 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 164 3.9E-38 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SMART SM00091 295 360 4.6E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Gene3D G3DSA:3.30.450.20 293 399 2.4E-11 T 22-04-2016 SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SMART SM00267 401 569 1.0E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SUPERFAMILY SSF55785 288 399 6.81E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 PANTHER PTHR33121 588 825 3.9E-64 T 22-04-2016 SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Gene3D G3DSA:3.20.20.450 585 828 5.0E-73 T 22-04-2016 IPR001633 EAL domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Pfam PF00989 PAS fold 297 398 2.9E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 PANTHER PTHR33121:SF10 588 825 3.9E-64 T 22-04-2016 SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SMART SM00052 579 827 5.5E-66 T 22-04-2016 IPR001633 EAL domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 565 1.0E-32 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Pfam PF00563 EAL domain 589 822 2.5E-62 T 22-04-2016 IPR001633 EAL domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SUPERFAMILY SSF141868 589 832 9.55E-71 T 22-04-2016 IPR001633 EAL domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 SUPERFAMILY SSF55073 418 571 4.55E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 567 1.9E-30 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02110 43f2e1cb6dc75a3de1b96c0b79cf9a4a 837 Gene3D G3DSA:3.30.70.270 415 573 1.6E-42 T 22-04-2016 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 PANTHER PTHR10516:SF320 13 66 7.1E-61 T 22-04-2016 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 PANTHER PTHR10516:SF320 85 204 7.1E-61 T 22-04-2016 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 SUPERFAMILY SSF54534 11 204 1.61E-53 T 22-04-2016 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 Gene3D G3DSA:3.10.50.40 92 204 5.8E-41 T 22-04-2016 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 Gene3D G3DSA:1.10.287.460 4 91 2.6E-23 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 202 3.7E-24 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 PANTHER PTHR10516 13 66 7.1E-61 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 PANTHER PTHR10516 85 204 7.1E-61 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS13080 80ab4c4a591035e80fb51f303e3be164 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 107 3.8E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 254 2.4E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 SUPERFAMILY SSF53850 30 255 1.5E-36 T 22-04-2016 SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 PANTHER PTHR35936 1 265 4.9E-17 T 22-04-2016 SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 SMART SM00062 29 258 4.1E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 Gene3D G3DSA:3.40.190.10 215 255 9.3E-21 T 22-04-2016 SAMA_RS05610 ab62d2f530fc2b048c0a9993940c0053 281 Gene3D G3DSA:3.40.190.10 32 113 9.3E-21 T 22-04-2016 SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 SUPERFAMILY SSF52540 2 205 1.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 Gene3D G3DSA:3.40.50.300 4 206 4.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 Pfam PF00005 ABC transporter 18 149 2.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 SMART SM00382 26 195 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08050 a3b27483bd46033faf040c3a35925e3f 225 PANTHER PTHR24220 3 205 1.9E-37 T 22-04-2016 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 PANTHER PTHR30204 3 122 1.5E-24 T 22-04-2016 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 PANTHER PTHR30204:SF1 3 122 1.5E-24 T 22-04-2016 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 Gene3D G3DSA:1.10.1660.10 9 63 1.6E-20 T 22-04-2016 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 SMART SM00422 11 78 1.6E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 SUPERFAMILY SSF46955 11 125 1.17E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 Pfam PF13411 MerR HTH family regulatory protein 11 76 6.7E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS07110 457f5f2b96289bf5acb3644f52019204 134 Gene3D G3DSA:1.10.1660.10 64 130 1.8E-17 T 22-04-2016 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Pfam PF00575 S1 RNA binding domain 652 722 3.1E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:1.10.150.310 501 632 4.4E-44 T 22-04-2016 IPR023097 Tex RuvX-like domain SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SUPERFAMILY SSF53098 321 471 4.17E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Pfam PF12836 Helix-hairpin-helix motif 493 557 1.8E-28 T 22-04-2016 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SUPERFAMILY SSF47781 472 560 5.89E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SUPERFAMILY SSF158832 2 320 5.23E-116 T 22-04-2016 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SMART SM00316 651 722 1.5E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:3.30.420.140 325 452 3.4E-51 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 PANTHER PTHR10724 1 727 0.0 T 22-04-2016 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SUPERFAMILY SSF50249 640 725 1.64E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SMART SM00732 325 426 7.9E-35 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.7E-65 T 22-04-2016 IPR018974 Tex-like protein, N-terminal SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:2.40.50.140 637 722 3.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 SUPERFAMILY SSF47781 562 634 2.67E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 PANTHER PTHR10724:SF1 1 727 0.0 T 22-04-2016 SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Pfam PF16921 Tex protein YqgF-like domain 325 453 1.3E-51 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:1.10.3500.10 110 321 8.5E-98 T 22-04-2016 IPR023323 Tex-like domain SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:1.10.3500.10 453 500 8.5E-98 T 22-04-2016 IPR023323 Tex-like domain SAMA_RS18240 b7c73f17458356d86ab115162ddce05d 778 Gene3D G3DSA:1.10.10.650 1 109 1.7E-44 T 22-04-2016 IPR023319 Tex-like protein, HTH domain SAMA_RS11290 e1dc28638faec06f822918f26d4528c7 176 SUPERFAMILY SSF160443 91 166 3.53E-10 T 22-04-2016 IPR002625 Smr domain SAMA_RS11290 e1dc28638faec06f822918f26d4528c7 176 PANTHER PTHR35562:SF1 1 176 1.1E-81 T 22-04-2016 SAMA_RS11290 e1dc28638faec06f822918f26d4528c7 176 Pfam PF01713 Smr domain 93 167 2.2E-20 T 22-04-2016 IPR002625 Smr domain SAMA_RS11290 e1dc28638faec06f822918f26d4528c7 176 SMART SM00463 90 168 6.3E-18 T 22-04-2016 IPR002625 Smr domain SAMA_RS11290 e1dc28638faec06f822918f26d4528c7 176 PANTHER PTHR35562 1 176 1.1E-81 T 22-04-2016 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 SUPERFAMILY SSF47729 3 93 2.36E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 PANTHER PTHR33175:SF2 2 98 2.5E-53 T 22-04-2016 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 SMART SM00411 3 92 8.3E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 Gene3D G3DSA:4.10.520.10 2 93 2.0E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 1.8E-50 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 PANTHER PTHR33175 2 98 2.5E-53 T 22-04-2016 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 8.5E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS10200 57392813bf336f9d08de0b5fbe6bdafb 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.379 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 PANTHER PTHR12592:SF0 1 496 1.5E-125 T 22-04-2016 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 SUPERFAMILY SSF64153 12 248 1.06E-51 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 492 1.8E-67 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 PANTHER PTHR12592 1 496 1.5E-125 T 22-04-2016 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 432 442 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 16 212 2.3E-33 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Pfam PF03853 YjeF-related protein N-terminus 35 192 2.6E-35 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 SUPERFAMILY SSF53613 228 492 6.39E-72 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 PIRSF PIRSF017184 10 495 1.2E-124 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Gene3D G3DSA:3.40.50.10260 11 235 9.7E-55 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 14 213 20.397 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Gene3D G3DSA:3.40.1190.20 236 492 1.9E-89 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 227 496 21.937 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SAMA_RS15800 5645d36b868b730c33d19716922fc929 496 Pfam PF01256 Carbohydrate kinase 250 485 5.2E-58 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Pfam PF00890 FAD binding domain 10 392 5.1E-99 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 524 3.5E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 9.1E-205 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PANTHER PTHR11632:SF27 2 535 1.1E-263 T 22-04-2016 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 SUPERFAMILY SSF56425 238 353 4.64E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 SUPERFAMILY SSF51905 356 447 3.58E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 SUPERFAMILY SSF51905 4 255 3.58E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Gene3D G3DSA:3.90.700.10 244 348 6.2E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Gene3D G3DSA:3.50.50.60 349 407 3.0E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Gene3D G3DSA:3.50.50.60 2 243 3.0E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 4.1E-5 T 22-04-2016 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 4.1E-5 T 22-04-2016 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 2.1E-9 T 22-04-2016 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.1E-9 T 22-04-2016 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 SUPERFAMILY SSF46977 425 525 3.01E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 Gene3D G3DSA:1.20.58.100 418 522 1.8E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS04565 f86637393dfe540b6bffc339040a6c7c 535 PANTHER PTHR11632 2 535 1.1E-263 T 22-04-2016 SAMA_RS02030 2f574701f2432ed9f9610abb279619ec 286 PANTHER PTHR38684 2 286 3.5E-65 T 22-04-2016 SAMA_RS02030 2f574701f2432ed9f9610abb279619ec 286 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 5.3E-34 T 22-04-2016 IPR031347 Protein AmpE SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 352 423 2.1E-20 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 PIRSF PIRSF000478 1 440 1.7E-149 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Gene3D G3DSA:3.90.1170.30 339 432 4.5E-31 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 PANTHER PTHR10515:SF0 2 442 1.1E-212 T 22-04-2016 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 SMART SM00941 350 424 1.5E-27 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 SUPERFAMILY SSF47648 2 70 1.01E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 437 3.0E-220 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 5.7E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 53.778 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Gene3D G3DSA:3.40.1030.10 75 338 1.2E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Gene3D G3DSA:1.20.970.10 2 68 5.0E-29 T 22-04-2016 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 SUPERFAMILY SSF52418 73 334 3.66E-86 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 9.6E-42 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 SUPERFAMILY SSF54680 337 438 2.35E-31 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.1E-158 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SAMA_RS05090 f512ea36f2e59e1a35254fd7aa2e6cf4 443 PANTHER PTHR10515 2 442 1.1E-212 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SAMA_RS18680 0b7ce5a1339832dc5b536ec3d2684279 198 SUPERFAMILY SSF47226 8 120 3.27E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18680 0b7ce5a1339832dc5b536ec3d2684279 198 Pfam PF01627 Hpt domain 26 116 7.4E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18680 0b7ce5a1339832dc5b536ec3d2684279 198 Gene3D G3DSA:1.20.120.160 3 117 3.1E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 Pfam PF00459 Inositol monophosphatase family 2 256 9.5E-77 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 Gene3D G3DSA:3.40.190.80 151 262 3.0E-42 T 22-04-2016 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PANTHER PTHR20854 1 267 1.2E-107 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PANTHER PTHR20854:SF4 1 267 1.2E-107 T 22-04-2016 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 Gene3D G3DSA:3.30.540.10 2 150 3.4E-56 T 22-04-2016 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 SUPERFAMILY SSF56655 1 262 4.45E-90 T 22-04-2016 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS06750 a60214e9cff3e8043e95c1e368cf6152 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 110 3.0E-27 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 PIRSF PIRSF006250 1 285 4.1E-105 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 PANTHER PTHR32179 1 283 1.9E-128 T 22-04-2016 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 Gene3D G3DSA:3.90.1170.20 2 132 1.4E-53 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 282 1.2E-96 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 Gene3D G3DSA:3.20.20.70 133 272 2.8E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 SUPERFAMILY SSF54675 2 111 3.85E-34 T 22-04-2016 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 282 2.0E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SAMA_RS02020 2be30a3344b89d87b4f4d2b34a934269 285 SUPERFAMILY SSF51690 112 282 4.32E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 PANTHER PTHR10459 16 251 1.6E-45 T 22-04-2016 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 PANTHER PTHR10459:SF61 16 251 1.6E-45 T 22-04-2016 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 SUPERFAMILY SSF56091 15 172 6.91E-33 T 22-04-2016 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 SUPERFAMILY SSF50249 147 251 8.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 Pfam PF01068 ATP dependent DNA ligase domain 23 172 7.4E-9 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 Pfam PF14743 DNA ligase OB-like domain 187 251 7.3E-24 T 22-04-2016 IPR029319 DNA ligase, OB-like domain SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 Gene3D G3DSA:3.30.1490.70 13 25 1.5E-8 T 22-04-2016 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 Gene3D G3DSA:3.30.1490.70 125 157 1.5E-8 T 22-04-2016 SAMA_RS10415 04d9405f9c03ec7374b4fdcb18be70a6 254 Gene3D G3DSA:2.40.50.140 158 252 4.8E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Pfam PF08676 MutL C terminal dimerisation domain 485 594 5.3E-14 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 9.8E-14 T 22-04-2016 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 SMART SM00853 481 614 1.4E-10 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 SUPERFAMILY SSF55874 2 204 5.5E-53 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 PANTHER PTHR10073 3 329 2.1E-144 T 22-04-2016 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 SMART SM01340 212 328 3.3E-45 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 639 23.138 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 SUPERFAMILY SSF118116 481 629 3.53E-29 T 22-04-2016 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 308 2.2E-96 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 SUPERFAMILY SSF54211 191 328 2.16E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Gene3D G3DSA:3.30.565.10 2 209 4.1E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Gene3D G3DSA:3.30.230.10 210 327 4.7E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS15785 a0e0f56b2ee41bfe17cbbbfbce04d1d9 650 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 327 1.9E-32 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 950 964 7.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 983 1001 7.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1007 1020 7.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423:SF439 623 755 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423:SF439 774 922 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Pfam PF00474 Sodium:solute symporter family 43 444 6.2E-6 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 888 1020 9.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SUPERFAMILY SSF55785 637 749 1.77E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423:SF439 14 66 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Pfam PF00072 Response regulator receiver domain 1049 1163 1.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Pfam PF12860 PAS fold 631 745 2.0E-45 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Gene3D G3DSA:3.30.450.20 623 739 6.1E-13 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SUPERFAMILY SSF55874 833 1023 2.51E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SMART SM00448 1047 1163 1.0E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Gene3D G3DSA:3.40.50.2300 1047 1166 6.9E-16 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423:SF439 557 576 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423 14 66 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423 774 922 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SMART SM00388 778 843 1.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SUPERFAMILY SSF52172 1047 1166 1.71E-15 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 426 446 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Gene3D G3DSA:1.10.287.130 771 839 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Pfam PF00512 His Kinase A (phospho-acceptor) domain 778 842 6.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423:SF439 942 1166 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423 557 576 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423 942 1166 1.0E-148 T 22-04-2016 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SUPERFAMILY SSF47384 763 843 3.34E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 SMART SM00387 887 1023 1.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 Gene3D G3DSA:3.30.565.10 845 1025 4.9E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02795 c76c17cb7656104fc74351245ac21a26 1167 PANTHER PTHR24423 623 755 1.0E-148 T 22-04-2016 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 5.9E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 7.0E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Gene3D G3DSA:2.40.110.10 128 223 1.7E-39 T 22-04-2016 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 PANTHER PTHR10909 8 389 1.4E-298 T 22-04-2016 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 2.7E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 SUPERFAMILY SSF56645 7 249 6.02E-86 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Gene3D G3DSA:1.10.540.10 6 127 1.8E-41 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 Gene3D G3DSA:1.20.140.10 224 387 3.4E-65 T 22-04-2016 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 PANTHER PTHR10909:SF326 8 389 1.4E-298 T 22-04-2016 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 SUPERFAMILY SSF47203 235 387 1.4E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS07105 e5376842d29f2e6e385cffaaba92f735 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 232 3.4E-71 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 PANTHER PTHR32125:SF4 10 236 8.9E-79 T 22-04-2016 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 230 2.0E-69 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 PANTHER PTHR32125 10 236 8.9E-79 T 22-04-2016 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 SUPERFAMILY SSF53448 11 232 6.72E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 234 30.837 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05410 baec66ae87c8280740fbb4880c35d398 238 Gene3D G3DSA:3.90.550.10 10 236 1.3E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 SUPERFAMILY SSF110849 41 174 1.52E-35 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 PANTHER PTHR33375 1 292 2.5E-97 T 22-04-2016 SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 Pfam PF02195 ParB-like nuclease domain 42 130 4.2E-30 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 40 211 8.5E-61 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 SMART SM00470 40 130 8.4E-38 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SAMA_RS18985 dfd2ec0f7d632ed77ea9ca6fd9e32948 292 Gene3D G3DSA:3.90.1530.10 34 136 3.7E-42 T 22-04-2016 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 PRINTS PR01021 OMPA domain signature 128 144 4.8E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 PRINTS PR01021 OMPA domain signature 84 106 4.8E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 PRINTS PR01021 OMPA domain signature 113 128 4.8E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 Pfam PF00691 OmpA family 83 178 8.7E-17 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 ProSitePatterns PS01068 OmpA-like domain. 115 160 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 SUPERFAMILY SSF103647 21 55 2.22E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 Gene3D G3DSA:3.30.1330.60 81 184 1.6E-28 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 Gene3D G3DSA:4.10.1080.10 22 49 2.0E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 SUPERFAMILY SSF103088 79 184 2.62E-29 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 PANTHER PTHR30128 20 185 2.3E-36 T 22-04-2016 SAMA_RS12875 a5a9c00142f727c36f282e4cc42fbe03 187 PANTHER PTHR30128:SF14 20 185 2.3E-36 T 22-04-2016 SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 152 2.6E-51 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 135 4.0E-74 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 3.5E-19 T 22-04-2016 IPR020603 MraZ domain SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 78 134 3.0E-18 T 22-04-2016 IPR020603 MraZ domain SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 SUPERFAMILY SSF89447 2 136 3.14E-44 T 22-04-2016 SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 55.503 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SAMA_RS01845 681b55d6e010e4f03dc6bdfa318a9e0d 152 PANTHER PTHR34701 2 151 9.3E-62 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 PANTHER PTHR33406 1 146 8.8E-148 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 PANTHER PTHR33406 167 764 8.8E-148 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 PANTHER PTHR33406:SF2 1 146 8.8E-148 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 PANTHER PTHR33406:SF2 167 764 8.8E-148 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 Gene3D G3DSA:1.20.1640.10 566 765 4.7E-26 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 Gene3D G3DSA:1.20.1640.10 187 386 6.6E-28 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 SUPERFAMILY SSF82866 182 380 1.7E-25 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 SUPERFAMILY SSF82866 565 766 1.44E-30 T 22-04-2016 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 Pfam PF03176 MMPL family 139 404 3.4E-12 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SAMA_RS08285 10cb512236b9adf39857741c3fcc7035 768 Pfam PF03176 MMPL family 550 762 7.6E-14 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 PANTHER PTHR24423 255 574 4.0E-65 T 22-04-2016 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 SMART SM00387 481 605 3.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 Gene3D G3DSA:3.30.565.10 445 575 2.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 548 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 4.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 SUPERFAMILY SSF53850 32 176 2.17E-6 T 22-04-2016 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 PANTHER PTHR24423:SF485 255 574 4.0E-65 T 22-04-2016 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 37 272 5.5E-25 T 22-04-2016 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 Gene3D G3DSA:1.10.287.130 376 434 3.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 SUPERFAMILY SSF47384 359 438 5.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 SMART SM00388 375 442 2.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 SUPERFAMILY SSF55874 442 575 3.27E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 575 2.3E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12545 0b656dc69f107129ea19de097694803b 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 436 1.4E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 Gene3D G3DSA:3.10.20.30 2 73 1.1E-29 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 Gene3D G3DSA:1.10.150.120 74 148 1.9E-25 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 58 9.1E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 SUPERFAMILY SSF54292 2 77 9.18E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 Pfam PF01799 [2Fe-2S] binding domain 72 141 1.4E-23 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 PANTHER PTHR11908:SF86 6 143 3.9E-28 T 22-04-2016 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 PANTHER PTHR11908 6 143 3.9E-28 T 22-04-2016 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 SUPERFAMILY SSF47741 72 145 5.5E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SAMA_RS17885 606a499b894c4455c7c1af4873f35369 151 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 SUPERFAMILY SSF82171 352 445 1.82E-7 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 SUPERFAMILY SSF82171 57 68 1.82E-7 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 SUPERFAMILY SSF82171 244 314 1.82E-7 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 SUPERFAMILY SSF82171 104 193 1.82E-7 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Gene3D G3DSA:2.120.10.30 264 315 4.0E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Gene3D G3DSA:2.120.10.30 52 70 4.0E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Gene3D G3DSA:2.120.10.30 105 175 4.0E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Gene3D G3DSA:2.120.10.30 363 438 4.0E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Pfam PF00326 Prolyl oligopeptidase family 674 828 6.0E-21 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 Gene3D G3DSA:3.40.50.1820 570 828 1.1E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 PANTHER PTHR11731 133 358 1.4E-179 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 PANTHER PTHR11731 378 839 1.4E-179 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 SUPERFAMILY SSF53474 570 827 4.48E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 PANTHER PTHR11731:SF117 133 358 1.4E-179 T 22-04-2016 SAMA_RS04430 530331991fbf8205b518100cae2fb67b 841 PANTHER PTHR11731:SF117 378 839 1.4E-179 T 22-04-2016 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.2E-42 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 SUPERFAMILY SSF111148 1 89 8.5E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 64 1.0E-32 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 PANTHER PTHR36965 2 91 1.8E-51 T 22-04-2016 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 PANTHER PTHR36965:SF1 2 91 1.8E-51 T 22-04-2016 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 Gene3D G3DSA:1.10.3880.10 1 89 8.4E-44 T 22-04-2016 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.838 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SAMA_RS13000 08dc2f802cd508ae0a90b31dd801bb89 91 PIRSF PIRSF029827 1 90 2.4E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 Gene3D G3DSA:3.10.640.10 1 178 1.1E-58 T 22-04-2016 SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 PIRSF PIRSF011484 1 179 4.9E-68 T 22-04-2016 IPR009822 YaeQ SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 PANTHER PTHR38784:SF1 1 179 1.5E-54 T 22-04-2016 SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 PANTHER PTHR38784 1 179 1.5E-54 T 22-04-2016 SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 Pfam PF07152 YaeQ protein 1 173 2.2E-57 T 22-04-2016 IPR009822 YaeQ SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 SMART SM01322 1 177 2.4E-83 T 22-04-2016 IPR009822 YaeQ SAMA_RS11415 bb5e11995fd45eb57089015ae0317899 179 SUPERFAMILY SSF52980 4 178 4.56E-52 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SAMA_RS00550 74ff03b83da9438d4c0d275c0f23ac73 402 Pfam PF00534 Glycosyl transferases group 1 198 358 7.0E-14 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SAMA_RS00550 74ff03b83da9438d4c0d275c0f23ac73 402 SUPERFAMILY SSF53756 5 373 4.08E-28 T 22-04-2016 SAMA_RS00550 74ff03b83da9438d4c0d275c0f23ac73 402 PANTHER PTHR12526 83 389 5.4E-19 T 22-04-2016 SAMA_RS00550 74ff03b83da9438d4c0d275c0f23ac73 402 Gene3D G3DSA:3.40.50.2000 195 307 5.0E-13 T 22-04-2016 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SUPERFAMILY SSF51445 252 533 5.97E-28 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SUPERFAMILY SSF51011 535 623 3.52E-16 T 22-04-2016 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Pfam PF01055 Glycosyl hydrolases family 31 393 628 6.3E-56 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Pfam PF16338 Domain of unknown function (DUF4968) 48 144 1.7E-14 T 22-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Pfam PF08305 NPCBM/NEW2 domain 974 1102 1.6E-25 T 22-04-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Pfam PF00754 F5/8 type C domain 812 923 3.6E-10 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Pfam PF17137 Domain of unknown function (DUF5110) 645 717 1.0E-18 T 22-04-2016 IPR033403 Domain of unknown function DUF5110 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SUPERFAMILY SSF74650 41 246 3.77E-32 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SMART SM00776 968 1104 8.4E-10 T 22-04-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SUPERFAMILY SSF49785 974 1099 6.38E-25 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 Gene3D G3DSA:2.60.120.260 802 968 1.2E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 PANTHER PTHR22762:SF38 107 281 6.7E-93 T 22-04-2016 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 PANTHER PTHR22762:SF38 303 769 6.7E-93 T 22-04-2016 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 SUPERFAMILY SSF49785 810 923 9.11E-19 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 PANTHER PTHR22762 107 281 6.7E-93 T 22-04-2016 SAMA_RS00795 0df90490b972e48dee02f65ff10c2aa5 1108 PANTHER PTHR22762 303 769 6.7E-93 T 22-04-2016 SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 Pfam PF00348 Polyprenyl synthetase 30 259 1.3E-56 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 Gene3D G3DSA:1.10.600.10 5 291 2.7E-92 T 22-04-2016 IPR008949 Isoprenoid synthase domain SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 PANTHER PTHR12001:SF23 2 273 3.9E-104 T 22-04-2016 SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 SUPERFAMILY SSF48576 8 277 2.34E-85 T 22-04-2016 IPR008949 Isoprenoid synthase domain SAMA_RS12720 76b728659aa552870baddabd16b50b20 293 PANTHER PTHR12001 2 273 3.9E-104 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Gene3D G3DSA:3.30.70.870 389 464 1.4E-25 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Gene3D G3DSA:3.30.230.10 469 584 2.3E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SUPERFAMILY SSF50447 247 381 7.29E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Pfam PF03144 Elongation factor Tu domain 2 307 373 2.4E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SUPERFAMILY SSF54980 585 674 3.45E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Gene3D G3DSA:3.40.50.300 4 268 2.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Pfam PF00009 Elongation factor Tu GTP binding domain 8 263 2.2E-31 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SMART SM00889 465 583 2.7E-62 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115:SF98 286 677 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115:SF98 236 264 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115:SF98 5 173 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Pfam PF03764 Elongation factor G, domain IV 464 583 1.5E-42 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Pfam PF00679 Elongation factor G C-terminus 585 671 8.8E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Gene3D G3DSA:3.30.70.240 585 671 1.0E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SUPERFAMILY SSF54211 464 584 1.97E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SUPERFAMILY SSF52540 5 263 9.79E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Pfam PF14492 Elongation Factor G, domain II 389 461 6.6E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115 286 677 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115 236 264 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 PANTHER PTHR23115 5 173 4.2E-187 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 Gene3D G3DSA:2.40.30.10 292 383 9.2E-21 T 22-04-2016 SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SUPERFAMILY SSF54980 388 464 3.6E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS05860 57b54a1586522033dba77c0e88fea87b 682 SMART SM00838 585 673 3.4E-18 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 PANTHER PTHR22726 13 354 2.3E-127 T 22-04-2016 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 PANTHER PTHR22726:SF10 13 354 2.3E-127 T 22-04-2016 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 Gene3D G3DSA:3.30.2010.10 71 154 6.9E-18 T 22-04-2016 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 11 486 32.69 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 Pfam PF01435 Peptidase family M48 76 261 2.2E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 Gene3D G3DSA:1.25.40.10 268 485 6.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS10010 1e590dba9a9ced04ad3da8b26239a19d 489 SUPERFAMILY SSF48452 273 464 2.17E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS08770 bd17f306d1d489f3ce18d7de7625115f 169 Gene3D G3DSA:3.40.30.10 12 167 1.9E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS08770 bd17f306d1d489f3ce18d7de7625115f 169 Pfam PF08534 Redoxin 34 158 2.8E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 SAMA_RS08770 bd17f306d1d489f3ce18d7de7625115f 169 SUPERFAMILY SSF52833 8 161 5.35E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS08770 bd17f306d1d489f3ce18d7de7625115f 169 PANTHER PTHR10681:SF107 36 167 3.5E-26 T 22-04-2016 SAMA_RS08770 bd17f306d1d489f3ce18d7de7625115f 169 PANTHER PTHR10681 36 167 3.5E-26 T 22-04-2016 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF55785 282 396 8.08E-25 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF52172 775 906 1.39E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF03707 Bacterial signalling protein N terminal repeat 132 176 5.4E-10 T 22-04-2016 IPR005330 MHYT domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF03707 Bacterial signalling protein N terminal repeat 200 264 6.8E-8 T 22-04-2016 IPR005330 MHYT domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF03707 Bacterial signalling protein N terminal repeat 69 122 9.6E-16 T 22-04-2016 IPR005330 MHYT domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:3.40.50.2300 767 900 7.1E-34 T 22-04-2016 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00091 399 471 0.034 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00091 271 337 6.0E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:3.30.450.20 420 540 1.2E-21 T 22-04-2016 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF47226 877 998 3.01E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF08447 PAS fold 424 508 6.0E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:3.30.450.20 266 384 1.4E-22 T 22-04-2016 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:1.10.287.130 541 596 5.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 394 2.2E-25 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 395 522 2.4E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF47384 519 601 4.12E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:3.30.565.10 600 759 4.4E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Gene3D G3DSA:1.20.120.160 910 1019 1.6E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00448 777 894 5.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF00989 PAS fold 272 383 1.8E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 648 758 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF55874 589 757 4.32E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF01627 Hpt domain 937 1001 4.3E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SUPERFAMILY SSF55785 406 518 1.09E-17 T 22-04-2016 IPR000014 PAS domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 712 6.3E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 698 6.3E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 756 6.3E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 737 6.3E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00086 347 387 100.0 T 22-04-2016 IPR001610 PAC motif SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00086 473 515 7.4E-7 T 22-04-2016 IPR001610 PAC motif SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00388 535 600 2.0E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF00512 His Kinase A (phospho-acceptor) domain 536 600 1.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 PANTHER PTHR24423 264 898 6.7E-171 T 22-04-2016 SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 SMART SM00387 647 759 4.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16220 4c6fed8280d76f1c583fab6aa6664c59 1112 Pfam PF00072 Response regulator receiver domain 779 894 7.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 Gene3D G3DSA:1.25.40.10 208 386 1.2E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SMART SM00028 231 266 98.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SMART SM00028 191 224 380.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SMART SM00028 111 144 42.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SMART SM00028 151 184 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SMART SM00267 453 625 2.1E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 Gene3D G3DSA:1.25.40.10 107 207 2.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SUPERFAMILY SSF55073 469 623 2.04E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 PANTHER PTHR10799 126 262 2.3E-25 T 22-04-2016 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 PANTHER PTHR10799 496 622 2.3E-25 T 22-04-2016 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 SUPERFAMILY SSF48452 108 299 2.52E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 Gene3D G3DSA:3.30.70.270 466 623 3.9E-47 T 22-04-2016 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 621 3.2E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 624 5.7E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 PANTHER PTHR10799:SF750 126 262 2.3E-25 T 22-04-2016 SAMA_RS13745 3963b33426b6c303b0972643e19e2403 626 PANTHER PTHR10799:SF750 496 622 2.3E-25 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 2.3E-134 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Gene3D G3DSA:3.30.1360.40 242 335 5.1E-24 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 SMART SM00434 15 465 6.6E-229 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 PANTHER PTHR10169:SF30 1 527 0.0 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Gene3D G3DSA:3.90.199.10 337 401 1.4E-104 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Gene3D G3DSA:3.90.199.10 34 241 1.4E-104 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 PANTHER PTHR10169 1 527 0.0 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 SUPERFAMILY SSF101904 501 745 2.75E-51 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 SUPERFAMILY SSF56719 35 487 2.09E-152 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Gene3D G3DSA:2.120.10.90 499 741 1.9E-23 T 22-04-2016 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.608 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15880 c5dbfd0a434d82ca2c192aa9aa8fa504 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 650 700 5.6E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Pfam PF00072 Response regulator receiver domain 48 156 1.2E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 PANTHER PTHR33121 434 762 7.5E-68 T 22-04-2016 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 SUPERFAMILY SSF55073 351 500 4.16E-23 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 SMART SM00052 510 752 7.0E-84 T 22-04-2016 IPR001633 EAL domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 SUPERFAMILY SSF52172 49 194 8.87E-9 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Gene3D G3DSA:3.30.70.270 348 505 1.7E-27 T 22-04-2016 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 PANTHER PTHR33121:SF13 434 762 7.5E-68 T 22-04-2016 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 1.9E-22 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Gene3D G3DSA:3.20.20.450 516 758 2.6E-80 T 22-04-2016 IPR001633 EAL domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Gene3D G3DSA:3.40.50.2300 47 167 3.8E-10 T 22-04-2016 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 SMART SM00267 335 500 2.0E-16 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 496 6.1E-18 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Pfam PF00563 EAL domain 517 747 2.2E-70 T 22-04-2016 IPR001633 EAL domain SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 Pfam PF11849 Domain of unknown function (DUF3369) 167 340 1.7E-43 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 SAMA_RS02660 f8b02c73159d864d90aeb9f43179678b 767 SUPERFAMILY SSF141868 516 759 9.02E-81 T 22-04-2016 IPR001633 EAL domain SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Pfam PF01103 Surface antigen 453 827 1.1E-96 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 PANTHER PTHR12815 10 680 8.4E-270 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 PANTHER PTHR12815 712 827 8.4E-270 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Pfam PF07244 Surface antigen variable number repeat 271 349 1.5E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Pfam PF07244 Surface antigen variable number repeat 352 426 7.4E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Pfam PF07244 Surface antigen variable number repeat 181 268 8.9E-17 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Pfam PF07244 Surface antigen variable number repeat 97 177 1.1E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 827 26.009 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 PANTHER PTHR12815:SF11 10 680 8.4E-270 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 PANTHER PTHR12815:SF11 712 827 8.4E-270 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Gene3D G3DSA:2.40.160.50 717 824 4.9E-23 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 Gene3D G3DSA:2.40.160.50 409 676 4.9E-23 T 22-04-2016 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 29 827 7.0E-284 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SAMA_RS06010 82659083970a3523fb90dfb314e47869 827 PIRSF PIRSF006076 1 827 5.1E-251 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Gene3D G3DSA:1.10.10.10 88 135 1.6E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Pfam PF04542 Sigma-70 region 2 17 88 4.9E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 SUPERFAMILY SSF88659 89 154 2.27E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 SUPERFAMILY SSF88946 10 88 5.63E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PIRSF PIRSF000770 2 238 2.6E-36 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Gene3D G3DSA:1.10.601.10 9 84 3.2E-17 T 22-04-2016 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PANTHER PTHR30385 11 238 2.2E-66 T 22-04-2016 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Pfam PF04539 Sigma-70 region 3 98 138 2.3E-11 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 SUPERFAMILY SSF88659 161 236 2.43E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Pfam PF04545 Sigma-70, region 4 182 230 2.6E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PRINTS PR00046 Major sigma-70 factor signature 186 198 3.1E-10 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PRINTS PR00046 Major sigma-70 factor signature 218 229 3.1E-10 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PRINTS PR00046 Major sigma-70 factor signature 203 218 3.1E-10 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 3.1E-10 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 4 236 63.249 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 PANTHER PTHR30385:SF7 11 238 2.2E-66 T 22-04-2016 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 203 229 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 Gene3D G3DSA:1.10.10.10 171 235 2.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 233 2.6E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11940 6c65e3010c6701029b9666452a86efab 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 234 6.1E-81 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 SUPERFAMILY SSF55486 235 481 6.74E-73 T 22-04-2016 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 Pfam PF11838 ERAP1-like C-terminal domain 552 861 1.4E-32 T 22-04-2016 IPR024571 ERAP1-like C-terminal domain SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 Gene3D G3DSA:1.10.390.10 336 483 1.5E-42 T 22-04-2016 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 Pfam PF01433 Peptidase family M1 45 415 3.5E-69 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 36 869 3.8E-282 T 22-04-2016 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 288 298 6.6E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 342 354 6.6E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 323 338 6.6E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 209 224 6.6E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 162 177 6.6E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PANTHER PTHR11533 20 668 1.5E-163 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PANTHER PTHR11533 691 759 1.5E-163 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PANTHER PTHR11533:SF163 20 668 1.5E-163 T 22-04-2016 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 PANTHER PTHR11533:SF163 691 759 1.5E-163 T 22-04-2016 SAMA_RS15235 4f2f07de12c806a9514c8521d62dbc95 875 SUPERFAMILY SSF63737 43 226 3.27E-37 T 22-04-2016 SAMA_RS13350 22e5683225e090df7da8e33f0d20bc76 291 PANTHER PTHR22911:SF65 1 289 1.5E-108 T 22-04-2016 SAMA_RS13350 22e5683225e090df7da8e33f0d20bc76 291 SUPERFAMILY SSF103481 191 290 3.86E-8 T 22-04-2016 SAMA_RS13350 22e5683225e090df7da8e33f0d20bc76 291 PANTHER PTHR22911 1 289 1.5E-108 T 22-04-2016 SAMA_RS13350 22e5683225e090df7da8e33f0d20bc76 291 SUPERFAMILY SSF103481 36 142 3.27E-7 T 22-04-2016 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 PANTHER PTHR23090 4 275 1.2E-143 T 22-04-2016 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 15 274 30.597 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 PANTHER PTHR23090:SF7 4 275 1.2E-143 T 22-04-2016 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 Pfam PF02540 NAD synthase 21 270 2.8E-63 T 22-04-2016 IPR022310 NAD/GMP synthase SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 25 272 3.4E-64 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 SUPERFAMILY SSF52402 2 276 1.17E-78 T 22-04-2016 SAMA_RS08090 ff2ee7bec734fd473d622899d28272a3 276 Gene3D G3DSA:3.40.50.620 4 275 7.2E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS07725 d76b5d6356448e6e4e6f6780215eb39d 186 Gene3D G3DSA:3.40.50.1110 8 181 3.9E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS07725 d76b5d6356448e6e4e6f6780215eb39d 186 SUPERFAMILY SSF52266 9 179 5.04E-45 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS07725 d76b5d6356448e6e4e6f6780215eb39d 186 PANTHER PTHR30383 9 185 4.8E-38 T 22-04-2016 SAMA_RS07725 d76b5d6356448e6e4e6f6780215eb39d 186 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 13 167 2.4E-20 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS00475 aaac47c3e372936318d0641051d12f8f 217 Pfam PF01965 DJ-1/PfpI family 13 141 2.9E-6 T 22-04-2016 IPR002818 DJ-1/PfpI SAMA_RS00475 aaac47c3e372936318d0641051d12f8f 217 Gene3D G3DSA:3.40.50.880 1 216 4.4E-96 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS00475 aaac47c3e372936318d0641051d12f8f 217 PIRSF PIRSF006320 1 217 3.2E-103 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 SAMA_RS00475 aaac47c3e372936318d0641051d12f8f 217 PANTHER PTHR10224 1 217 9.2E-116 T 22-04-2016 SAMA_RS00475 aaac47c3e372936318d0641051d12f8f 217 SUPERFAMILY SSF52317 1 216 6.39E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 SUPERFAMILY SSF52540 4 558 2.28E-204 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Gene3D G3DSA:3.10.410.10 457 536 5.6E-30 T 22-04-2016 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 560 40.766 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Pfam PF01268 Formate--tetrahydrofolate ligase 3 559 2.8E-222 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 PANTHER PTHR10025 1 559 5.1E-283 T 22-04-2016 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 100 110 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Gene3D G3DSA:3.30.1510.10 126 256 1.4E-45 T 22-04-2016 SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Gene3D G3DSA:3.40.50.300 14 125 4.1E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 Gene3D G3DSA:3.40.50.300 258 446 4.1E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16400 fbf96344dc7e3e20b937dc975b60fa90 560 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 338 349 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 Gene3D G3DSA:1.10.10.10 128 188 1.9E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 186 2.0E-19 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 Pfam PF04542 Sigma-70 region 2 33 97 1.5E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 Gene3D G3DSA:1.10.1740.10 14 113 7.0E-28 T 22-04-2016 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 SUPERFAMILY SSF88659 127 187 1.18E-6 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 PANTHER PTHR30173:SF29 15 198 5.4E-65 T 22-04-2016 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 SUPERFAMILY SSF88946 9 110 2.35E-28 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05600 75a852035174c75e117576d6da265ac1 198 PANTHER PTHR30173 15 198 5.4E-65 T 22-04-2016 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 Gene3D G3DSA:2.40.30.10 241 322 5.7E-17 T 22-04-2016 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 210 3.1E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 Pfam PF00009 Elongation factor Tu GTP binding domain 24 210 1.1E-44 T 22-04-2016 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 Gene3D G3DSA:3.40.50.300 13 230 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 468 52.472 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 SUPERFAMILY SSF50465 329 430 7.91E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 SUPERFAMILY SSF52540 18 232 2.43E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PRINTS PR00315 GTP-binding elongation factor signature 87 95 5.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PRINTS PR00315 GTP-binding elongation factor signature 107 117 5.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PRINTS PR00315 GTP-binding elongation factor signature 123 134 5.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PRINTS PR00315 GTP-binding elongation factor signature 160 169 5.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 3.6E-197 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 SUPERFAMILY SSF50447 239 325 3.98E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PANTHER PTHR23115 73 360 9.8E-72 T 22-04-2016 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 PANTHER PTHR23115 29 51 9.8E-72 T 22-04-2016 SAMA_RS15090 8c876705a394af41aeca753f266c8147 469 Gene3D G3DSA:2.40.30.10 330 432 2.1E-8 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 141 1.9E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 PANTHER PTHR13779 1 425 6.5E-191 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Pfam PF16193 AAA C-terminal domain 172 245 2.0E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Gene3D G3DSA:1.20.272.10 227 325 2.1E-43 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Gene3D G3DSA:1.10.3710.10 326 423 1.4E-32 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 SUPERFAMILY SSF48019 230 412 1.25E-70 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 PANTHER PTHR13779:SF7 1 425 6.5E-191 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Gene3D G3DSA:1.10.8.60 135 220 1.1E-9 T 22-04-2016 SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 SMART SM00382 30 148 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 SUPERFAMILY SSF52540 1 216 6.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Pfam PF12002 MgsA AAA+ ATPase C terminal 246 412 1.3E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SAMA_RS09255 cc4253697db912acc50b7dde80dff8a6 425 Gene3D G3DSA:3.40.50.300 1 134 2.1E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 2.8E-23 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 2.8E-23 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 2.8E-23 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 2.8E-23 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 SUPERFAMILY SSF55920 3 254 3.93E-91 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 253 6.6E-98 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PANTHER PTHR10804:SF75 1 264 1.7E-168 T 22-04-2016 SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 Gene3D G3DSA:3.90.230.10 3 260 2.9E-100 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 Pfam PF00557 Metallopeptidase family M24 12 245 6.6E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 Hamap MF_01974 Methionine aminopeptidase [map]. 3 254 42.267 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SAMA_RS05965 3f8de233e8115e407d9df4d580b0c2f8 266 PANTHER PTHR10804 1 264 1.7E-168 T 22-04-2016 SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 PIRSF PIRSF006728 1 413 1.3E-145 T 22-04-2016 IPR008135 Competence-induced protein CinA SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 PANTHER PTHR13939:SF0 1 415 1.3E-173 T 22-04-2016 SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 SUPERFAMILY SSF142433 248 407 1.83E-52 T 22-04-2016 IPR008136 CinA, C-terminal SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 SMART SM00852 4 171 1.9E-33 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 163 1.3E-27 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 PANTHER PTHR13939 1 415 1.3E-173 T 22-04-2016 SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 Pfam PF00994 Probable molybdopterin binding domain 5 169 3.7E-30 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 Gene3D G3DSA:3.90.950.20 246 408 2.7E-53 T 22-04-2016 IPR008136 CinA, C-terminal SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 260 407 7.0E-42 T 22-04-2016 IPR008136 CinA, C-terminal SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 424 165.196 T 22-04-2016 IPR008135 Competence-induced protein CinA SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 408 4.1E-118 T 22-04-2016 IPR008135 Competence-induced protein CinA SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 SUPERFAMILY SSF53218 1 203 1.44E-33 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 Pfam PF02464 Competence-damaged protein 253 406 2.5E-54 T 22-04-2016 IPR008136 CinA, C-terminal SAMA_RS01365 bd06f992084cddf0d4781140caeb99d1 424 Gene3D G3DSA:3.40.980.10 1 200 5.7E-25 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 Pfam PF01722 BolA-like protein 11 84 7.3E-32 T 22-04-2016 IPR002634 BolA protein SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 Gene3D G3DSA:3.30.300.90 1 99 7.7E-32 T 22-04-2016 IPR002634 BolA protein SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 PIRSF PIRSF003113 1 99 1.7E-34 T 22-04-2016 IPR002634 BolA protein SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 PANTHER PTHR12735:SF23 1 99 2.1E-49 T 22-04-2016 SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 SUPERFAMILY SSF82657 1 88 4.45E-30 T 22-04-2016 IPR002634 BolA protein SAMA_RS13275 72c47395abf8c27f5899840d97995b1a 99 PANTHER PTHR12735 1 99 2.1E-49 T 22-04-2016 SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 SUPERFAMILY SSF53335 183 338 4.42E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 PANTHER PTHR37524:SF2 1 360 7.0E-198 T 22-04-2016 SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 Pfam PF01728 FtsJ-like methyltransferase 185 291 1.0E-7 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 PANTHER PTHR37524 1 360 7.0E-198 T 22-04-2016 SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 PIRSF PIRSF028774 1 360 3.4E-177 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 Gene3D G3DSA:3.40.50.150 183 330 6.5E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12675 fdfbfc90b8410c3ff4dbb3870ff2ec4a 361 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 81.926 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 SUPERFAMILY SSF55073 210 360 1.73E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 PANTHER PTHR10799:SF750 159 358 6.3E-26 T 22-04-2016 SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 SMART SM00267 194 361 6.8E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 356 1.0E-38 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 361 2.3E-40 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 Gene3D G3DSA:3.30.70.270 207 364 8.9E-47 T 22-04-2016 SAMA_RS19215 44638c5d94e7c0c8e039cd8ca89de3b3 375 PANTHER PTHR10799 159 358 6.3E-26 T 22-04-2016 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 SUPERFAMILY SSF51735 1 195 8.74E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 PANTHER PTHR11374:SF18 1 444 1.0E-242 T 22-04-2016 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 5.8E-133 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 SMART SM00984 320 424 4.3E-47 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 SUPERFAMILY SSF48179 204 301 1.01E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 3.2E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Gene3D G3DSA:3.40.50.720 1 206 1.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Gene3D G3DSA:3.40.50.720 235 444 8.6E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 PIRSF PIRSF500134 1 442 1.4E-183 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 PANTHER PTHR11374 1 444 1.0E-242 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 PIRSF PIRSF000124 1 439 1.9E-144 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 SUPERFAMILY SSF52413 308 435 2.62E-34 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Gene3D G3DSA:1.20.5.100 207 233 1.7E-18 T 22-04-2016 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 1.8E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SAMA_RS11725 82c6b8f284661b7ee5d5396fa0efee74 452 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 7.5E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 SUPERFAMILY SSF51344 3 86 4.05E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 3.0E-38 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 2.9E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 2.1E-10 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 SUPERFAMILY SSF46604 88 137 6.54E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 Gene3D G3DSA:2.60.15.10 3 91 9.0E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 Gene3D G3DSA:1.20.5.440 92 133 2.2E-18 T 22-04-2016 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.8E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 PANTHER PTHR13822 1 141 1.2E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18940 a66e1656c3ddb55fae06904fc54b39e4 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 20.384 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 PANTHER PTHR23502 15 389 1.7E-128 T 22-04-2016 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 386 4.9E-71 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 Gene3D G3DSA:1.20.1250.20 22 201 1.4E-23 T 22-04-2016 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 Gene3D G3DSA:1.20.1250.20 223 390 1.5E-7 T 22-04-2016 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 Pfam PF07690 Major Facilitator Superfamily 25 364 2.7E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 PANTHER PTHR23502:SF39 15 389 1.7E-128 T 22-04-2016 SAMA_RS10525 440b2058e442c465ea5ca5da7eb22dca 401 SUPERFAMILY SSF103473 7 392 3.53E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 Pfam PF00255 Glutathione peroxidase 36 131 1.1E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PIRSF PIRSF000303 2 180 2.3E-49 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 Gene3D G3DSA:3.40.30.10 27 176 8.3E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 ProSitePatterns PS00460 Glutathione peroxidases active site. 46 61 - T 22-04-2016 IPR029759 Glutathione peroxidase active site SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PRINTS PR01011 Glutathione peroxidase family signature 79 95 2.9E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PRINTS PR01011 Glutathione peroxidase family signature 44 61 2.9E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PRINTS PR01011 Glutathione peroxidase family signature 138 147 2.9E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PANTHER PTHR11592:SF31 21 176 5.6E-84 T 22-04-2016 SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 SUPERFAMILY SSF52833 26 176 8.75E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS12915 c7ad35f823f35328c6c00e3be8a707a5 180 PANTHER PTHR11592 21 176 5.6E-84 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 SUPERFAMILY SSF56300 1 217 1.35E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 227 9.2E-80 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 Pfam PF00149 Calcineurin-like phosphoesterase 1 198 1.1E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 236 112.819 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 PANTHER PTHR34990 1 227 4.6E-93 T 22-04-2016 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 PANTHER PTHR34990:SF1 1 227 4.6E-93 T 22-04-2016 SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 Gene3D G3DSA:3.60.21.10 1 124 3.8E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS06380 ff7dac5c180064bb70cdc512b2a00363 238 Gene3D G3DSA:3.60.21.10 172 210 3.8E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Gene3D G3DSA:1.25.40.20 5 80 1.6E-16 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PANTHER PTHR30603:SF0 671 949 1.5E-106 T 22-04-2016 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PANTHER PTHR30603:SF0 473 514 1.5E-106 T 22-04-2016 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Pfam PF04545 Sigma-70, region 4 878 930 2.8E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Pfam PF12796 Ankyrin repeats (3 copies) 7 77 2.7E-6 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 903 929 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PRINTS PR00046 Major sigma-70 factor signature 918 929 8.8E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PRINTS PR00046 Major sigma-70 factor signature 741 754 8.8E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PRINTS PR00046 Major sigma-70 factor signature 903 918 8.8E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PRINTS PR00046 Major sigma-70 factor signature 765 773 8.8E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PRINTS PR00046 Major sigma-70 factor signature 882 894 8.8E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 SMART SM00248 24 53 1.5E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 741 754 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 SUPERFAMILY SSF88659 786 835 3.01E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 SUPERFAMILY SSF48403 13 79 3.58E-13 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 SUPERFAMILY SSF88946 477 784 2.09E-56 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 SUPERFAMILY SSF88659 854 938 1.01E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Gene3D G3DSA:1.10.601.10 474 786 3.1E-67 T 22-04-2016 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Gene3D G3DSA:1.10.10.10 874 942 4.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Pfam PF04542 Sigma-70 region 2 720 786 9.3E-22 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 Gene3D G3DSA:1.10.10.10 790 838 6.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 713 930 1.4E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PANTHER PTHR30603 671 949 1.5E-106 T 22-04-2016 SAMA_RS19040 75a3df11442bd7d223636da58e06aca9 949 PANTHER PTHR30603 473 514 1.5E-106 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 4.1E-288 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 SUPERFAMILY SSF100920 383 539 1.44E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Pfam PF00012 Hsp70 protein 4 599 3.0E-263 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.577 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.90.640.10 229 314 4.1E-32 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:2.60.34.10 389 530 8.9E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 SUPERFAMILY SSF53067 1 182 3.56E-65 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.1E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.30.30.30 53 105 1.8E-27 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.30.420.40 118 194 3.4E-64 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.30.420.40 4 52 3.4E-64 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.30.420.40 195 228 7.1E-34 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:3.30.420.40 318 360 7.1E-34 T 22-04-2016 SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 Gene3D G3DSA:1.20.1270.10 531 599 8.4E-24 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SAMA_RS13105 1c167def24e51717ca2d6149bf8f9653 637 SUPERFAMILY SSF53067 186 381 1.54E-68 T 22-04-2016 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 PANTHER PTHR10516 129 160 9.3E-36 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 PANTHER PTHR10516 1 83 9.3E-36 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 Gene3D G3DSA:3.10.50.40 3 80 1.2E-17 T 22-04-2016 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 Gene3D G3DSA:3.10.50.40 126 141 1.2E-17 T 22-04-2016 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 SUPERFAMILY SSF54534 3 140 8.64E-31 T 22-04-2016 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 1.8E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 PANTHER PTHR10516:SF316 129 160 9.3E-36 T 22-04-2016 SAMA_RS10575 8a98429645448bafc556087f189fb62c 160 PANTHER PTHR10516:SF316 1 83 9.3E-36 T 22-04-2016 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 305 2.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 2.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 380 2.4E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 SUPERFAMILY SSF58104 261 516 8.24E-60 T 22-04-2016 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 511 8.4E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 SMART SM00283 255 516 9.2E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 PANTHER PTHR32089 1 517 9.6E-196 T 22-04-2016 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 PANTHER PTHR32089:SF52 1 517 9.6E-196 T 22-04-2016 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 117 7.7E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 SMART SM00091 11 78 2.7E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 Pfam PF08447 PAS fold 34 117 4.3E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 SUPERFAMILY SSF55785 22 118 1.92E-27 T 22-04-2016 IPR000014 PAS domain SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 Gene3D G3DSA:1.10.287.950 270 484 5.6E-47 T 22-04-2016 SAMA_RS05195 7ebe3bde83735ba8fce066f54abb4942 517 Gene3D G3DSA:3.30.450.20 22 117 1.8E-24 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 PANTHER PTHR24096 9 530 1.5E-162 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 523 8.3E-22 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Gene3D G3DSA:3.40.50.980 13 194 1.2E-34 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Gene3D G3DSA:2.30.38.10 358 431 3.4E-26 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Gene3D G3DSA:3.30.300.30 432 530 1.7E-32 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Pfam PF00501 AMP-binding enzyme 21 437 1.2E-99 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 Gene3D G3DSA:3.40.50.980 195 357 6.2E-40 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 SUPERFAMILY SSF56801 14 530 4.32E-147 T 22-04-2016 SAMA_RS15130 1a302564c02fae80c650b634bdc35cf7 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 PANTHER PTHR23151:SF68 394 642 3.2E-265 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 PANTHER PTHR23151:SF68 124 375 3.2E-265 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 190 642 1.0E-208 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 SUPERFAMILY SSF47005 328 373 7.19E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Gene3D G3DSA:4.10.320.10 330 375 2.4E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Pfam PF02817 e3 binding domain 335 369 3.4E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 411 641 1.7E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 234 263 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 SUPERFAMILY SSF51230 105 196 1.96E-22 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 SUPERFAMILY SSF51230 1 89 2.36E-22 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Gene3D G3DSA:2.40.50.100 3 77 4.6E-21 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Gene3D G3DSA:2.40.50.100 213 287 1.4E-22 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Gene3D G3DSA:3.30.559.10 401 641 4.7E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 SUPERFAMILY SSF51230 213 302 1.96E-23 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Pfam PF00364 Biotin-requiring enzyme 107 176 5.7E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Pfam PF00364 Biotin-requiring enzyme 4 73 3.2E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Pfam PF00364 Biotin-requiring enzyme 213 282 9.0E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 PANTHER PTHR23151 394 642 3.2E-265 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 PANTHER PTHR23151 124 375 3.2E-265 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 Gene3D G3DSA:2.40.50.100 105 197 3.3E-21 T 22-04-2016 SAMA_RS02045 40335fb771465fa3d2d9ad0949a413f4 642 SUPERFAMILY SSF52777 400 641 1.2E-81 T 22-04-2016 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 81 95 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 3 391 50.328 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 PIRSF PIRSF001413 1 397 1.5E-170 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 SUPERFAMILY SSF53686 7 389 8.77E-146 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 Gene3D G3DSA:3.40.50.1100 178 394 1.9E-94 T 22-04-2016 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 Gene3D G3DSA:3.40.50.1100 98 177 3.7E-22 T 22-04-2016 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 389 6.4E-194 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 PANTHER PTHR10314 8 387 7.1E-229 T 22-04-2016 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 PANTHER PTHR10314:SF3 8 387 7.1E-229 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11145 05b7be214b1b6c23eef27d1139e20fff 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 378 2.8E-52 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 PANTHER PTHR11731 52 71 2.9E-202 T 22-04-2016 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 PANTHER PTHR11731 109 744 2.9E-202 T 22-04-2016 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 Pfam PF00326 Prolyl oligopeptidase family 551 747 1.3E-52 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 Gene3D G3DSA:3.40.50.1820 496 745 5.1E-86 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 460 8.2E-97 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 SUPERFAMILY SSF53474 496 744 2.03E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 SUPERFAMILY SSF82171 35 481 6.28E-58 T 22-04-2016 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 PANTHER PTHR11731:SF110 52 71 2.9E-202 T 22-04-2016 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 PANTHER PTHR11731:SF110 109 744 2.9E-202 T 22-04-2016 SAMA_RS03190 e8c5805ea0719af8536a83111e38731c 748 Gene3D G3DSA:2.140.10.30 37 479 5.6E-118 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SUPERFAMILY SSF55785 166 278 2.76E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 456 8.0E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SMART SM00052 471 718 2.2E-62 T 22-04-2016 IPR001633 EAL domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 Gene3D G3DSA:3.20.20.450 478 719 1.9E-68 T 22-04-2016 IPR001633 EAL domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SUPERFAMILY SSF55073 305 459 4.16E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 PANTHER PTHR33121 478 720 5.4E-60 T 22-04-2016 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 PANTHER PTHR33121:SF10 478 720 5.4E-60 T 22-04-2016 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SMART SM00267 289 459 3.8E-59 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SMART SM00065 24 177 3.1E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 Pfam PF00563 EAL domain 479 713 1.3E-62 T 22-04-2016 IPR001633 EAL domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 Gene3D G3DSA:3.30.450.20 172 289 2.2E-6 T 22-04-2016 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 454 1.9E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SUPERFAMILY SSF55781 26 176 3.43E-5 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 Gene3D G3DSA:3.30.70.270 302 461 8.3E-50 T 22-04-2016 SAMA_RS15515 19b26651ee11ce9803a9bf904e69005f 734 SUPERFAMILY SSF141868 478 719 8.11E-69 T 22-04-2016 IPR001633 EAL domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Gene3D G3DSA:3.30.70.240 596 682 1.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SUPERFAMILY SSF54980 600 690 3.24E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Pfam PF03764 Elongation factor G, domain IV 476 595 2.8E-44 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115 301 688 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115 3 174 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115 251 279 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Gene3D G3DSA:3.40.50.300 2 283 1.6E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Gene3D G3DSA:2.40.30.10 304 401 6.9E-36 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SUPERFAMILY SSF50447 261 399 6.85E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.622 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.5E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Gene3D G3DSA:3.30.70.870 402 477 1.7E-31 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SMART SM00889 477 595 1.9E-63 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SUPERFAMILY SSF52540 3 278 4.97E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115:SF154 301 688 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115:SF154 3 174 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 PANTHER PTHR23115:SF154 251 279 0.0 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Pfam PF00679 Elongation factor G C-terminus 597 683 5.7E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Pfam PF14492 Elongation Factor G, domain II 401 474 7.2E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 9.4E-299 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 2.4E-60 T 22-04-2016 SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 Gene3D G3DSA:3.30.230.10 481 595 1.1E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SUPERFAMILY SSF54980 401 478 7.55E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SMART SM00838 597 684 2.4E-46 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 SUPERFAMILY SSF54211 476 596 3.79E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS03105 65bfce62a58afa448c09485c6cd66a33 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 4.0E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SMART SM00825 Beta-ketoacyl synthase 23 477 2.9E-44 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF53901 639 755 2.51E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF53901 500 611 2.51E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.10.129.10 1545 1731 9.9E-22 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.10.129.10 1262 1453 6.1E-53 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.10.129.10 1777 1925 6.0E-50 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.10.129.10 1056 1235 1.7E-26 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF53901 192 419 6.16E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF53901 22 141 6.16E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 22 297 7.7E-41 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 500 754 1.5E-23 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 PANTHER PTHR11712 187 494 7.2E-94 T 22-04-2016 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 PANTHER PTHR11712 22 152 7.2E-94 T 22-04-2016 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Pfam PF07977 FabA-like domain 1781 1916 2.9E-38 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Pfam PF07977 FabA-like domain 1306 1440 2.3E-39 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.40.47.10 310 476 6.8E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF54637 1765 1923 6.61E-29 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 306 422 2.6E-33 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF54637 1056 1233 7.7E-22 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 210 226 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.40.47.10 500 755 1.9E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 Gene3D G3DSA:3.40.47.10 23 309 4.5E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF54637 1297 1451 9.27E-31 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05835 d641a2a5d904f196a3404ac8168751ef 1926 SUPERFAMILY SSF54637 1548 1731 2.73E-20 T 22-04-2016 IPR029069 HotDog domain SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PANTHER PTHR31964:SF41 243 309 2.4E-67 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PANTHER PTHR31964:SF41 1 88 2.4E-67 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 Gene3D G3DSA:3.40.50.620 1 148 6.8E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 Gene3D G3DSA:3.40.50.620 155 301 2.8E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 SUPERFAMILY SSF52402 155 306 1.67E-26 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 Pfam PF00582 Universal stress protein family 4 146 1.8E-21 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 Pfam PF00582 Universal stress protein family 175 299 2.1E-16 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PANTHER PTHR31964 243 309 2.4E-67 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PANTHER PTHR31964 1 88 2.4E-67 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 SUPERFAMILY SSF52402 4 153 1.26E-31 T 22-04-2016 SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PRINTS PR01438 Universal stress protein signature 124 146 1.2E-5 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PRINTS PR01438 Universal stress protein signature 4 22 1.2E-5 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS09385 f1096258f8c3f1b1f907457eb962484a 310 PRINTS PR01438 Universal stress protein signature 106 118 1.2E-5 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Gene3D G3DSA:3.40.50.1100 325 399 4.5E-10 T 22-04-2016 SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Gene3D G3DSA:3.40.50.1100 193 313 1.6E-49 T 22-04-2016 SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Gene3D G3DSA:3.90.1380.10 1 82 5.6E-16 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 SUPERFAMILY SSF53686 1 425 7.07E-127 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 95 362 1.5E-21 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 TIGRFAM TIGR00260 thrC: threonine synthase 68 385 3.4E-100 T 22-04-2016 IPR004450 Threonine synthase-like SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 PANTHER PTHR10314:SF1 25 422 7.6E-122 T 22-04-2016 SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 PANTHER PTHR10314 25 422 7.6E-122 T 22-04-2016 SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Pfam PF14821 Threonine synthase N terminus 10 78 3.3E-9 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SAMA_RS04735 af1372787c22048bb2ba25edbe4ea082 428 Gene3D G3DSA:3.40.50.1100 104 192 3.6E-11 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 602 9.0E-147 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 47.405 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PRINTS PR00702 Acriflavin resistance protein family signature 504 528 3.1E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 3.1E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PRINTS PR00702 Acriflavin resistance protein family signature 579 602 3.1E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 595 1.8E-78 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081:SF1 315 614 2.1E-206 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081 315 614 2.1E-206 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081 1 173 2.1E-206 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 Pfam PF07549 SecD/SecF GG Motif 116 140 1.1E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 Gene3D G3DSA:1.20.1640.10 436 606 8.5E-24 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 Pfam PF02355 Protein export membrane protein 435 602 1.9E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 SUPERFAMILY SSF82866 411 606 1.02E-42 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.1E-33 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081 226 284 2.1E-206 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081:SF1 226 284 2.1E-206 T 22-04-2016 SAMA_RS11440 1703c5d60df414b18c1250d2795efc0f 616 PANTHER PTHR30081:SF1 1 173 2.1E-206 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 SMART SM00304 207 261 1.1E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Pfam PF00672 HAMP domain 190 256 3.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 PANTHER PTHR32089 97 538 5.3E-124 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 536 1.0E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Pfam PF17200 Single Cache domain 2 40 185 1.2E-37 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 SMART SM00283 276 537 6.2E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Gene3D G3DSA:1.10.287.950 240 296 1.8E-4 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Gene3D G3DSA:1.10.287.950 297 506 3.7E-53 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 SMART SM01049 37 125 1.7E-16 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 PANTHER PTHR32089:SF34 97 538 5.3E-124 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 SUPERFAMILY SSF58104 229 538 7.98E-72 T 22-04-2016 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 8.3E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 182 202 8.3E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS08635 5f2cb15fba7220bc9d84e0634d00bfe9 538 Gene3D G3DSA:3.30.450.20 27 177 6.1E-22 T 22-04-2016 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 PANTHER PTHR21234:SF8 3 236 3.8E-76 T 22-04-2016 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 SUPERFAMILY SSF53167 3 234 1.31E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 4.3E-112 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 50.732 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 Gene3D G3DSA:3.40.50.1580 10 235 7.6E-82 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 PANTHER PTHR21234 3 236 3.8E-76 T 22-04-2016 IPR018017 Nucleoside phosphorylase SAMA_RS05100 65f9ac75fa915825c1c8f3466ccbe68b 236 Pfam PF01048 Phosphorylase superfamily 17 219 9.9E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.30.980.10 65 129 6.7E-41 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.30.980.10 188 223 6.7E-41 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.30.54.20 131 187 4.2E-20 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 SUPERFAMILY SSF81271 3 61 7.85E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 SUPERFAMILY SSF52954 529 638 3.78E-32 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.10.20.30 1 64 2.8E-21 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 7.8E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.8E-239 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 529 3.8E-48 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 7.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 7.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 7.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 7.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 7.2E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.884 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 SUPERFAMILY SSF55186 64 241 1.44E-61 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.30.930.10 242 530 9.4E-120 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 SUPERFAMILY SSF55681 243 526 5.18E-98 T 22-04-2016 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Pfam PF02824 TGS domain 4 61 2.9E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Pfam PF03129 Anticodon binding domain 541 630 2.9E-20 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 SMART SM00863 170 219 1.2E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SAMA_RS09210 bae0cf45e69f1a69d16f8731a81bf680 642 Gene3D G3DSA:3.40.50.800 531 641 2.4E-35 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 Gene3D G3DSA:3.40.640.10 60 302 3.9E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 PANTHER PTHR11986 1 403 3.4E-203 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 Gene3D G3DSA:3.90.1150.10 4 59 2.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 Gene3D G3DSA:3.90.1150.10 306 401 2.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 Pfam PF00202 Aminotransferase class-III 20 399 6.2E-122 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 44.146 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.5E-146 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 402 2.8E-208 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 SUPERFAMILY SSF53383 16 400 2.64E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS15705 f465a4f4ccd91a84e5141d0649a3e914 404 PANTHER PTHR11986:SF71 1 403 3.4E-203 T 22-04-2016 SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.192 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 PANTHER PTHR33445 1 156 1.4E-49 T 22-04-2016 SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.8E-57 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 SUPERFAMILY SSF81573 63 121 9.15E-16 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.1E-39 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SAMA_RS18965 cec438f8b7c8b0dc93539a188ad9506a 156 Gene3D G3DSA:1.20.5.620 62 122 5.7E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 PIRSF PIRSF006232 1 229 1.2E-53 T 22-04-2016 IPR012093 Pirin SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 PANTHER PTHR13903:SF7 1 231 1.4E-100 T 22-04-2016 SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 Pfam PF02678 Pirin 7 119 3.8E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 PANTHER PTHR13903 1 231 1.4E-100 T 22-04-2016 IPR012093 Pirin SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 SUPERFAMILY SSF51182 1 230 3.13E-72 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS07245 8614a981a88638399b47ea7adaef8233 231 Gene3D G3DSA:2.60.120.10 3 230 2.7E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 Gene3D G3DSA:1.10.357.10 67 183 6.7E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 Gene3D G3DSA:1.10.10.60 2 62 2.7E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 SUPERFAMILY SSF48498 78 183 2.02E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 PANTHER PTHR30055 1 183 1.0E-85 T 22-04-2016 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 6.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 SUPERFAMILY SSF46689 3 79 1.13E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS12585 b89df04f5092ddf21def0b39b162eb5d 192 PANTHER PTHR30055:SF48 1 183 1.0E-85 T 22-04-2016 SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 SUPERFAMILY SSF51206 10 149 1.28E-29 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 SUPERFAMILY SSF46785 150 223 4.76E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 4.2E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 SMART SM00419 171 219 1.9E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 Gene3D G3DSA:2.60.120.10 12 150 2.9E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 PANTHER PTHR24567:SF30 1 229 6.6E-35 T 22-04-2016 SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 PANTHER PTHR24567 1 229 6.6E-35 T 22-04-2016 SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 Gene3D G3DSA:1.10.10.10 152 225 3.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 Pfam PF13545 Crp-like helix-turn-helix domain 156 224 1.4E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS14065 c2bee3226c0830a172d3d7ae2ff06308 231 SMART SM00100 16 135 5.5E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 PANTHER PTHR30435 1 137 1.2E-68 T 22-04-2016 SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 1.4E-51 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.0E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 PANTHER PTHR30435:SF2 1 137 1.2E-68 T 22-04-2016 SAMA_RS12125 5ffca6c6b8b649f2c3c5470e40f4d267 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 3.4E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SAMA_RS04625 f376e9171a0fa7665586fdce6c47b16b 175 PANTHER PTHR28026 1 174 7.7E-55 T 22-04-2016 SAMA_RS04625 f376e9171a0fa7665586fdce6c47b16b 175 PANTHER PTHR28026:SF3 1 174 7.7E-55 T 22-04-2016 SAMA_RS04625 f376e9171a0fa7665586fdce6c47b16b 175 Pfam PF06127 Protein of unknown function (DUF962) 1 146 1.1E-23 T 22-04-2016 IPR009305 Protein of unknown function DUF962 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 Gene3D G3DSA:1.10.10.10 13 76 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 Gene3D G3DSA:1.20.120.530 80 237 5.7E-57 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 3.3E-117 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 SUPERFAMILY SSF48008 79 230 3.4E-62 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 240 160.239 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 PANTHER PTHR11751 1 97 1.8E-59 T 22-04-2016 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 PANTHER PTHR11751:SF402 1 97 1.8E-59 T 22-04-2016 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 SUPERFAMILY SSF46785 12 89 7.29E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 1.7E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 SMART SM00345 12 71 1.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10065 d2b8eae9641a759747542e30654ef126 240 Pfam PF07840 FadR C-terminal domain 72 234 2.0E-70 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 Gene3D G3DSA:3.20.20.450 6 240 2.1E-59 T 22-04-2016 IPR001633 EAL domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 Gene3D G3DSA:3.10.580.10 275 394 5.9E-5 T 22-04-2016 SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 415 493 2.0E-13 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 Gene3D G3DSA:3.30.70.270 404 502 6.7E-18 T 22-04-2016 SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 SUPERFAMILY SSF55073 406 504 1.49E-20 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 PANTHER PTHR33121:SF10 4 274 2.9E-50 T 22-04-2016 SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 Pfam PF00563 EAL domain 9 239 1.6E-50 T 22-04-2016 IPR001633 EAL domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 SMART SM00052 2 241 1.1E-40 T 22-04-2016 IPR001633 EAL domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 SUPERFAMILY SSF141868 9 240 1.24E-63 T 22-04-2016 IPR001633 EAL domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 PANTHER PTHR33121 4 274 2.9E-50 T 22-04-2016 SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 SMART SM00267 392 548 1.8E-5 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 493 2.1E-13 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16435 085587842c348bf58838efd82a602bf8 583 SUPERFAMILY SSF54631 267 393 3.04E-6 T 22-04-2016 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 Pfam PF02811 PHP domain 9 89 1.2E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 Gene3D G3DSA:3.20.20.140 162 260 5.9E-42 T 22-04-2016 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 Gene3D G3DSA:3.20.20.140 6 93 5.9E-42 T 22-04-2016 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 PANTHER PTHR30007 1 281 3.3E-92 T 22-04-2016 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 SUPERFAMILY SSF89550 170 279 1.04E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 SUPERFAMILY SSF89550 6 88 1.04E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 PANTHER PTHR30007:SF4 1 281 3.3E-92 T 22-04-2016 SAMA_RS11120 5aabd0fd0e6f3d64abe3bd7e015cf912 286 SMART SM00481 8 75 9.9E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.733 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 150 2.5E-27 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Gene3D G3DSA:3.30.230.40 167 253 6.1E-37 T 22-04-2016 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 SUPERFAMILY SSF56784 1 157 9.61E-35 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 1.0E-73 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 PANTHER PTHR23133 10 97 3.3E-167 T 22-04-2016 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 PANTHER PTHR23133 163 355 3.3E-167 T 22-04-2016 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 SUPERFAMILY SSF54211 167 251 2.28E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Pfam PF13242 HAD-hyrolase-like 103 146 1.0E-4 T 22-04-2016 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Gene3D G3DSA:3.30.230.40 258 355 7.5E-31 T 22-04-2016 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 145 9.4E-46 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Gene3D G3DSA:3.40.50.1000 1 158 5.4E-38 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 PANTHER PTHR23133:SF2 10 97 3.3E-167 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 PANTHER PTHR23133:SF2 163 355 3.3E-167 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 55.079 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 SUPERFAMILY SSF54211 252 342 1.77E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS10165 87ad6e64dfab52c9191c423ebad1b5f3 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.3E-62 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PANTHER PTHR23115:SF175 397 595 4.5E-276 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PANTHER PTHR23115:SF175 2 373 4.5E-276 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PANTHER PTHR23115 397 595 4.5E-276 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 PANTHER PTHR23115 2 373 4.5E-276 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 SUPERFAMILY SSF54980 292 370 7.19E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Gene3D G3DSA:2.40.30.10 193 289 1.2E-23 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.8E-297 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 SMART SM00838 401 486 0.008 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 SUPERFAMILY SSF52540 2 235 7.02E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Pfam PF00009 Elongation factor Tu GTP binding domain 2 182 7.6E-53 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.7E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.4E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 SUPERFAMILY SSF54980 400 493 5.28E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Gene3D G3DSA:3.30.70.240 401 489 1.5E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Gene3D G3DSA:3.30.70.870 292 369 5.5E-25 T 22-04-2016 SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 8.3E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Gene3D G3DSA:3.40.50.300 2 192 5.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Pfam PF00679 Elongation factor G C-terminus 399 483 5.6E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS04590 3917a6c74077cdc05d7cafd1fab49afa 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 304.881 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SAMA_RS18850 871d1ab46ebd1cb557263ff8c3686e98 253 PANTHER PTHR17985:SF8 2 238 8.9E-78 T 22-04-2016 SAMA_RS18850 871d1ab46ebd1cb557263ff8c3686e98 253 Pfam PF05742 Transport and Golgi organisation 2 1 235 1.9E-63 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 SAMA_RS18850 871d1ab46ebd1cb557263ff8c3686e98 253 PANTHER PTHR17985 2 238 8.9E-78 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Gene3D G3DSA:2.40.30.10 310 410 2.0E-38 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Gene3D G3DSA:3.30.70.870 411 485 7.0E-39 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SUPERFAMILY SSF54980 608 695 1.1E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 6.0E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115 3 184 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Pfam PF14492 Elongation Factor G, domain II 409 483 7.8E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.4E-65 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Gene3D G3DSA:3.40.50.300 6 293 3.7E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 110.057 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Pfam PF03764 Elongation factor G, domain IV 484 603 4.8E-49 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SMART SM00838 605 693 9.3E-57 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Gene3D G3DSA:3.30.230.10 489 604 2.6E-54 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 7.6E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SUPERFAMILY SSF54211 484 604 6.32E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SUPERFAMILY SSF52540 6 287 6.53E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SUPERFAMILY SSF54980 407 485 1.69E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Gene3D G3DSA:3.30.70.240 605 691 4.0E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 PANTHER PTHR23115:SF66 3 184 0.0 T 22-04-2016 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SUPERFAMILY SSF50447 271 409 2.45E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 Pfam PF00679 Elongation factor G C-terminus 605 691 1.7E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS01110 c1acb428aabbf308a0130e3e8c7655b9 698 SMART SM00889 485 603 4.3E-79 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 PANTHER PTHR22926 2 360 1.0E-186 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 PANTHER PTHR22926:SF5 2 360 1.0E-186 T 22-04-2016 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 8.9E-6 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.2E-145 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.01 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01875 cf698e57cfce0f2b278a64e487a46464 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.9E-38 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 PANTHER PTHR21621 1 296 4.4E-125 T 22-04-2016 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 Gene3D G3DSA:3.30.470.20 173 276 7.9E-38 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 2.2E-81 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 SUPERFAMILY SSF56059 98 288 6.36E-50 T 22-04-2016 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 5.7E-68 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 PANTHER PTHR21621:SF0 1 296 4.4E-125 T 22-04-2016 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 Gene3D G3DSA:3.30.1490.20 103 172 2.0E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 50.819 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK SAMA_RS16470 2799d94668748730019b114b945fb1a1 301 Gene3D G3DSA:3.40.50.20 10 102 1.8E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS01565 460f25af3d83c6d6e611aaccbab0764e 395 Gene3D G3DSA:1.50.10.10 6 390 2.0E-115 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SAMA_RS01565 460f25af3d83c6d6e611aaccbab0764e 395 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 30 381 2.6E-96 T 22-04-2016 SAMA_RS01565 460f25af3d83c6d6e611aaccbab0764e 395 SUPERFAMILY SSF48208 2 393 3.59E-116 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS01565 460f25af3d83c6d6e611aaccbab0764e 395 PANTHER PTHR15108 1 389 1.7E-72 T 22-04-2016 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 Pfam PF01726 LexA DNA binding domain 1 65 3.4E-30 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 Gene3D G3DSA:1.10.10.10 1 69 6.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 1.1E-79 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.328 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 Gene3D G3DSA:2.10.109.10 81 203 4.8E-45 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 4.9E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 4.9E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 4.9E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 SUPERFAMILY SSF46785 3 69 2.61E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 PANTHER PTHR33516 1 207 1.9E-104 T 22-04-2016 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 SUPERFAMILY SSF51306 81 203 2.62E-37 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 PANTHER PTHR33516:SF2 1 207 1.9E-104 T 22-04-2016 SAMA_RS18105 93e0f5ec41c463912ef0d1bc92ff7cda 207 Pfam PF00717 Peptidase S24-like 119 184 5.6E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 2.4E-81 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 Pfam PF00925 GTP cyclohydrolase II 6 170 3.3E-68 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 PANTHER PTHR21327:SF14 1 199 1.6E-139 T 22-04-2016 SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 SUPERFAMILY SSF142695 3 173 1.44E-65 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 46.368 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SAMA_RS06690 d062b33b551515b8d0b38c1faf3c4c78 205 PANTHER PTHR21327 1 199 1.6E-139 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 PANTHER PTHR10799:SF710 73 212 1.0E-47 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 PANTHER PTHR10799:SF710 482 694 1.0E-47 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Gene3D G3DSA:3.30.450.40 38 213 2.1E-20 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Gene3D G3DSA:3.30.450.40 238 408 1.4E-20 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 PANTHER PTHR10799 73 212 1.0E-47 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 PANTHER PTHR10799 482 694 1.0E-47 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SMART SM00065 58 213 0.001 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SMART SM00065 259 413 0.0032 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Pfam PF00990 Diguanylate cyclase, GGDEF domain 448 605 1.7E-51 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Gene3D G3DSA:3.30.70.270 450 618 1.1E-61 T 22-04-2016 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Pfam PF00563 EAL domain 629 848 1.9E-28 T 22-04-2016 IPR001633 EAL domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SUPERFAMILY SSF55073 453 613 6.75E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SUPERFAMILY SSF55781 238 407 6.98E-21 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SUPERFAMILY SSF55781 38 212 5.89E-19 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 610 3.7E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SMART SM00267 437 611 1.1E-69 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Gene3D G3DSA:3.20.20.450 626 848 1.3E-27 T 22-04-2016 IPR001633 EAL domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SUPERFAMILY SSF141868 627 848 1.03E-28 T 22-04-2016 IPR001633 EAL domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 SMART SM00052 621 855 1.5E-8 T 22-04-2016 IPR001633 EAL domain SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Pfam PF13185 GAF domain 261 404 4.1E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17015 25c7da82bd420e59bb3efe7cc4b61d22 862 Pfam PF13185 GAF domain 59 203 8.1E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 SMART SM01008 212 301 2.4E-19 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 SUPERFAMILY SSF56003 337 745 6.02E-107 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Gene3D G3DSA:3.30.365.10 598 745 7.5E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 SUPERFAMILY SSF56003 33 246 1.67E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 PANTHER PTHR11908 38 746 1.8E-184 T 22-04-2016 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 PANTHER PTHR11908:SF2 38 746 1.8E-184 T 22-04-2016 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 PIRSF PIRSF036389 1 750 9.8E-238 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Gene3D G3DSA:3.30.365.10 338 442 1.4E-28 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Gene3D G3DSA:3.90.1170.50 183 298 2.6E-17 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Gene3D G3DSA:3.30.365.10 50 176 2.2E-33 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 620 695 7.0E-12 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 338 549 7.7E-28 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS17890 bd6ff2517b24f9e959ea3cd16c56b4ae 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 32 179 4.0E-14 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 Gene3D G3DSA:3.30.565.10 307 437 3.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 437 2.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 4.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 4.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 4.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 SUPERFAMILY SSF47384 217 296 4.12E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 SUPERFAMILY SSF55874 306 437 2.36E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 PANTHER PTHR24423 90 437 2.7E-44 T 22-04-2016 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 PANTHER PTHR24423 6 21 2.7E-44 T 22-04-2016 SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 SUPERFAMILY SSF55785 106 183 6.28E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 SMART SM00387 331 437 1.5E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14935 90ea2f656842e0de07bf7e18b7566b9a 437 Gene3D G3DSA:3.30.450.20 117 182 7.4E-6 T 22-04-2016 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SUPERFAMILY SSF55785 256 366 2.28E-20 T 22-04-2016 IPR000014 PAS domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 543 4.1E-36 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Pfam PF08447 PAS fold 272 359 9.7E-23 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SUPERFAMILY SSF141868 562 804 1.28E-85 T 22-04-2016 IPR001633 EAL domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SUPERFAMILY SSF55073 383 548 4.79E-39 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SMART SM00267 367 546 6.8E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 PANTHER PTHR33121:SF13 546 816 4.9E-80 T 22-04-2016 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Pfam PF00563 EAL domain 562 795 6.3E-73 T 22-04-2016 IPR001633 EAL domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SMART SM00091 249 317 4.6E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Gene3D G3DSA:3.30.70.270 380 554 1.3E-46 T 22-04-2016 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 373 1.1E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 PANTHER PTHR33121 546 816 4.9E-80 T 22-04-2016 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SMART SM00086 324 367 6.3E-5 T 22-04-2016 IPR001610 PAC motif SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Gene3D G3DSA:3.20.20.450 560 802 8.3E-94 T 22-04-2016 IPR001633 EAL domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Pfam PF00990 Diguanylate cyclase, GGDEF domain 378 541 2.9E-39 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 Gene3D G3DSA:3.30.450.20 236 379 2.0E-30 T 22-04-2016 SAMA_RS00415 bea6f20021d9ef853f5b1176a82f4fa9 817 SMART SM00052 556 800 7.1E-114 T 22-04-2016 IPR001633 EAL domain SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PANTHER PTHR24322 11 142 3.5E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PANTHER PTHR24322 158 190 3.5E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 194 2.2E-4 T 22-04-2016 SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PANTHER PTHR24322:SF383 11 142 3.5E-53 T 22-04-2016 SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PANTHER PTHR24322:SF383 158 190 3.5E-53 T 22-04-2016 SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 SUPERFAMILY SSF51735 4 264 1.65E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 Gene3D G3DSA:3.40.50.720 6 231 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02115 f918d44fffe2284ba3cf7cefc1a8b7d4 270 Pfam PF00106 short chain dehydrogenase 7 199 1.0E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 Gene3D G3DSA:2.30.40.10 345 361 4.7E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 Gene3D G3DSA:2.30.40.10 2 50 4.7E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 PIRSF PIRSF038994 1 376 8.7E-107 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 PANTHER PTHR11113 5 375 6.6E-112 T 22-04-2016 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 18 371 1.7E-90 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 Pfam PF01979 Amidohydrolase family 46 374 7.8E-24 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 PANTHER PTHR11113:SF7 5 375 6.6E-112 T 22-04-2016 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 SUPERFAMILY SSF51338 345 375 1.82E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 SUPERFAMILY SSF51338 1 49 1.82E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 SUPERFAMILY SSF51556 50 345 7.49E-97 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS04935 7610c0b7a3351888292052222ef87f8a 377 Gene3D G3DSA:3.20.20.140 51 344 3.5E-91 T 22-04-2016 SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 SMART SM00267 153 324 5.8E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 PANTHER PTHR10799:SF710 64 320 4.0E-17 T 22-04-2016 SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 SUPERFAMILY SSF55073 169 326 1.73E-33 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 PANTHER PTHR10799 64 320 4.0E-17 T 22-04-2016 SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 320 3.8E-30 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 Gene3D G3DSA:3.30.70.270 166 328 9.4E-40 T 22-04-2016 SAMA_RS08710 555781d5455133d9ef684c77e3f41408 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 323 9.6E-31 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Pfam PF16187 Middle or third domain of peptidase_M16 371 646 2.4E-82 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Gene3D G3DSA:3.30.830.10 246 476 1.6E-68 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 SUPERFAMILY SSF63411 710 919 2.79E-50 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 SUPERFAMILY SSF63411 475 692 3.0E-53 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Gene3D G3DSA:3.30.830.10 3 238 4.5E-73 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Pfam PF05193 Peptidase M16 inactive domain 187 359 2.1E-22 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Pfam PF05193 Peptidase M16 inactive domain 653 829 9.4E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS11300 554535c1613097966f20be8e86770e12 929 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 48 71 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Gene3D G3DSA:3.30.830.10 708 924 1.8E-48 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 SUPERFAMILY SSF63411 237 474 1.2E-77 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 SUPERFAMILY SSF63411 5 232 7.16E-61 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 PANTHER PTHR11851 10 365 0.0 T 22-04-2016 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 PANTHER PTHR11851 382 914 0.0 T 22-04-2016 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 PANTHER PTHR11851:SF131 10 365 0.0 T 22-04-2016 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 PANTHER PTHR11851:SF131 382 914 0.0 T 22-04-2016 SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Pfam PF00675 Insulinase (Peptidase family M16) 27 164 2.8E-37 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS11300 554535c1613097966f20be8e86770e12 929 Gene3D G3DSA:3.30.830.10 477 707 5.5E-57 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 PANTHER PTHR21343 5 502 9.3E-214 T 22-04-2016 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 496 1.4E-145 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 Gene3D G3DSA:3.40.50.300 5 242 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 259 453 2.1E-51 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 SUPERFAMILY SSF52540 1 245 8.47E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 194.499 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 235 1.0E-31 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 PANTHER PTHR21343:SF1 5 502 9.3E-214 T 22-04-2016 SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 SUPERFAMILY SSF52317 271 408 5.2E-34 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 SUPERFAMILY SSF52317 197 244 5.2E-34 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS04020 920b7ab6e225348f088162487022cedb 502 Gene3D G3DSA:3.40.50.880 258 463 1.8E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 PANTHER PTHR30489 8 202 8.2E-147 T 22-04-2016 SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 PANTHER PTHR30489 249 870 8.2E-147 T 22-04-2016 SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 Pfam PF02687 FtsX-like permease family 744 861 4.7E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 Pfam PF02687 FtsX-like permease family 278 394 2.3E-6 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 PANTHER PTHR30489:SF2 8 202 8.2E-147 T 22-04-2016 SAMA_RS15430 ba6fdd3eb510423c0b380ab9824c38ee 872 PANTHER PTHR30489:SF2 249 870 8.2E-147 T 22-04-2016 SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 SUPERFAMILY SSF55874 273 406 6.16E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 Gene3D G3DSA:3.30.565.10 264 407 4.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 PANTHER PTHR24423:SF427 164 406 5.0E-28 T 22-04-2016 SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 SMART SM00388 195 259 0.0019 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 SMART SM00387 300 409 5.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 407 5.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 Gene3D G3DSA:1.10.287.130 185 253 1.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 SUPERFAMILY SSF47384 182 256 2.55E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00790 cc8f5718b4459c7781bf430f5f861710 409 PANTHER PTHR24423 164 406 5.0E-28 T 22-04-2016 SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 Gene3D G3DSA:1.20.1050.10 82 200 8.1E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 76 1.4E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 SUPERFAMILY SSF47616 76 194 2.13E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 PANTHER PTHR11260:SF144 1 200 1.7E-39 T 22-04-2016 SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 PANTHER PTHR11260 1 200 1.7E-39 T 22-04-2016 SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 SUPERFAMILY SSF52833 3 78 4.84E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 Gene3D G3DSA:3.40.30.10 3 76 1.7E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03600 ba99e9b2110e2f8790387a669b2c33d2 224 Pfam PF13410 Glutathione S-transferase, C-terminal domain 117 194 8.3E-6 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 28.969 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:2.40.50.140 132 201 1.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 PANTHER PTHR22648 1 452 1.8E-182 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Pfam PF08529 NusA N-terminal domain 4 127 1.1E-36 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF69705 1 130 3.92E-41 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF47794 358 418 6.75E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:3.30.1480.10 1 128 2.2E-45 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF54814 283 346 3.73E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF50249 136 203 2.4E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 346 4.5E-125 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Pfam PF14520 Helix-hairpin-helix domain 436 490 6.0E-7 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:3.30.300.20 282 350 1.9E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:1.10.150.20 436 494 1.2E-23 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 PANTHER PTHR22648:SF0 1 452 1.8E-182 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 493 1.4E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 417 9.3E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF54814 204 282 3.92E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SMART SM00316 137 204 8.6E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:1.10.150.20 358 424 3.4E-22 T 22-04-2016 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 SUPERFAMILY SSF47794 433 496 1.88E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Pfam PF00575 S1 RNA binding domain 136 200 2.9E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Pfam PF13184 NusA-like KH domain 234 301 6.0E-28 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SAMA_RS05025 7296e691b4e35bae250ccef48ad1dadd 499 Gene3D G3DSA:3.30.300.20 203 281 9.8E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS10690 22480a6686c5342287881a015786117f 249 SUPERFAMILY SSF102705 1 248 2.09E-78 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SAMA_RS10690 22480a6686c5342287881a015786117f 249 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 248 1.5E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SAMA_RS10690 22480a6686c5342287881a015786117f 249 Gene3D G3DSA:3.40.1390.30 108 216 5.5E-25 T 22-04-2016 SAMA_RS10690 22480a6686c5342287881a015786117f 249 PANTHER PTHR13799 1 245 2.0E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SAMA_RS10690 22480a6686c5342287881a015786117f 249 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 236 5.0E-56 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SAMA_RS10690 22480a6686c5342287881a015786117f 249 Gene3D G3DSA:3.40.1390.30 1 107 4.5E-34 T 22-04-2016 SAMA_RS11225 27697298d154a92d2c223a39e988efc2 223 SUPERFAMILY SSF110997 142 219 6.93E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS11225 27697298d154a92d2c223a39e988efc2 223 PANTHER PTHR38687 2 223 4.4E-44 T 22-04-2016 SAMA_RS11225 27697298d154a92d2c223a39e988efc2 223 Pfam PF05036 Sporulation related domain 143 206 1.3E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS11225 27697298d154a92d2c223a39e988efc2 223 Gene3D G3DSA:3.30.70.1070 138 217 1.8E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS11225 27697298d154a92d2c223a39e988efc2 223 PANTHER PTHR38687:SF1 2 223 4.4E-44 T 22-04-2016 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 Gene3D G3DSA:2.170.130.10 24 156 3.2E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 Pfam PF00593 TonB dependent receptor 477 723 1.3E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 154 2.8E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 PANTHER PTHR32552 13 724 4.8E-38 T 22-04-2016 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 707 724 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 SUPERFAMILY SSF56935 344 724 1.47E-98 T 22-04-2016 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 SUPERFAMILY SSF56935 42 317 1.47E-98 T 22-04-2016 SAMA_RS03140 f5b83866c90643a6f1f4b24080462ddb 724 Gene3D G3DSA:2.40.170.20 157 724 3.5E-91 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 9.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 9.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 Pfam PF12833 Helix-turn-helix domain 189 266 3.9E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 PANTHER PTHR11019:SF126 73 272 3.5E-25 T 22-04-2016 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 SMART SM00342 181 265 4.0E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 PANTHER PTHR11019 73 272 3.5E-25 T 22-04-2016 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 Gene3D G3DSA:1.10.10.60 164 218 1.0E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 Gene3D G3DSA:1.10.10.60 219 267 1.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14210 a7a3b6dcb362d1716f1f7dab457e4494 272 SUPERFAMILY SSF46689 218 267 7.62E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 SUPERFAMILY SSF50193 1 122 1.1E-49 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 Gene3D G3DSA:2.40.150.20 1 122 2.4E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.3E-56 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.4E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.043 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 PANTHER PTHR11761 1 122 2.0E-74 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS01175 e1bf8d08932416e08899b5a467d13181 122 SMART SM01374 1 122 2.6E-83 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 Pfam PF02132 RecR protein 42 77 1.1E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 2.8E-71 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 PANTHER PTHR30446 1 199 4.1E-107 T 22-04-2016 SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 SUPERFAMILY SSF111304 2 199 5.89E-69 T 22-04-2016 IPR023627 Recombination protein RecR SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 Pfam PF13662 Toprim domain 81 172 1.2E-21 T 22-04-2016 IPR006171 Toprim domain SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 SMART SM00493 81 166 8.2E-13 T 22-04-2016 IPR006171 Toprim domain SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 97.688 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SAMA_RS06855 29acf241bb6fb174b7bdfffd3d64f28f 199 PANTHER PTHR30446:SF0 1 199 4.1E-107 T 22-04-2016 SAMA_RS14695 1b8c35a96808ed4f06a6c4c4916bf0c9 205 Pfam PF13505 Outer membrane protein beta-barrel domain 6 205 9.8E-24 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SAMA_RS14695 1b8c35a96808ed4f06a6c4c4916bf0c9 205 Gene3D G3DSA:2.40.160.20 7 205 6.8E-12 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS14695 1b8c35a96808ed4f06a6c4c4916bf0c9 205 SUPERFAMILY SSF56925 21 205 8.63E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 SUPERFAMILY SSF52121 3 155 9.68E-61 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 Gene3D G3DSA:3.40.50.960 3 156 1.3E-64 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.1E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.9E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05315 8ac912df4b34e6cdfcecd603f56ebb5f 158 PANTHER PTHR21058 1 158 9.3E-77 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 PANTHER PTHR11911:SF99 1 423 1.6E-90 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Pfam PF00571 CBS domain 196 258 1.6E-4 T 22-04-2016 IPR000644 CBS domain SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Pfam PF03448 MgtE intracellular N domain 38 138 1.6E-24 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 TIGRFAM TIGR00400 mgtE: magnesium transporter 11 453 1.4E-86 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SUPERFAMILY SSF54631 139 278 5.81E-29 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Pfam PF01769 Divalent cation transporter 324 446 8.9E-22 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 PANTHER PTHR11911 1 423 1.6E-90 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Gene3D G3DSA:3.10.580.10 133 263 1.7E-16 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SUPERFAMILY SSF161093 281 452 1.44E-44 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SMART SM00924 37 140 3.8E-37 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Gene3D G3DSA:1.25.60.10 8 132 1.5E-24 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SUPERFAMILY SSF158791 12 137 3.4E-30 T 22-04-2016 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 Gene3D G3DSA:1.10.357.20 282 452 2.2E-47 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SMART SM00116 147 200 11.0 T 22-04-2016 IPR000644 CBS domain SAMA_RS16135 1d0862332608ea9f5cccf7a24736e3c0 454 SMART SM00116 211 259 7.6E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:1.20.120.430 121 181 1.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:1.20.120.430 240 270 1.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:1.20.120.430 383 453 1.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Pfam PF12631 MnmE helical domain 122 450 3.0E-61 T 22-04-2016 IPR025867 MnmE, helical domain SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:3.30.1360.120 2 120 3.1E-40 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 5.9E-33 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Pfam PF01926 50S ribosome-binding GTPase 217 305 6.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 PANTHER PTHR11649:SF56 7 453 9.2E-166 T 22-04-2016 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 3.8E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 PANTHER PTHR11649 7 453 9.2E-166 T 22-04-2016 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 SUPERFAMILY SSF52540 196 371 6.11E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 SUPERFAMILY SSF52540 71 162 6.11E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:3.40.50.300 212 239 2.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.0E-103 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.685 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 SUPERFAMILY SSF116878 120 219 9.81E-52 T 22-04-2016 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 SUPERFAMILY SSF116878 378 453 9.81E-52 T 22-04-2016 SAMA_RS00040 55a7ba3bb250bf416f6b5a68d5b54f6b 453 Gene3D G3DSA:3.40.50.300 285 375 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 SUPERFAMILY SSF103473 7 376 3.58E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 Gene3D G3DSA:1.20.1250.20 7 183 1.3E-16 T 22-04-2016 SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 Gene3D G3DSA:1.20.1250.20 202 374 6.1E-28 T 22-04-2016 SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 PIRSF PIRSF004925 1 382 2.7E-90 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 Pfam PF12832 MFS_1 like family 9 351 1.2E-82 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 PANTHER PTHR23522 1 370 3.3E-108 T 22-04-2016 SAMA_RS11275 9a5d709d3fd58186323c1e017a1d0146 383 PANTHER PTHR23522:SF3 1 370 3.3E-108 T 22-04-2016 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 PANTHER PTHR11019:SF52 226 343 4.6E-23 T 22-04-2016 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 SUPERFAMILY SSF46689 288 336 5.82E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 PANTHER PTHR11019 226 343 4.6E-23 T 22-04-2016 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 SMART SM00342 253 335 3.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 Pfam PF12833 Helix-turn-helix domain 259 336 1.2E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 Gene3D G3DSA:1.10.10.60 288 336 9.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11070 ec78afeaee48644010dd1d4431471c8d 358 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 42 219 2.9E-18 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 SMART SM00448 5 115 2.0E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 Gene3D G3DSA:1.10.10.10 135 235 2.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 1.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 Gene3D G3DSA:3.40.50.2300 7 128 2.6E-37 T 22-04-2016 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 Pfam PF00072 Response regulator receiver domain 7 116 1.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 SUPERFAMILY SSF46894 135 235 6.24E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 SUPERFAMILY SSF52172 6 127 3.27E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 PANTHER PTHR26402 5 234 1.5E-83 T 22-04-2016 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 PANTHER PTHR26402:SF514 5 234 1.5E-83 T 22-04-2016 SAMA_RS02355 cca43e624a2686d946b611678d84a1c4 237 SMART SM00862 158 234 9.3E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 PANTHER PTHR11705:SF82 36 393 1.0E-87 T 22-04-2016 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 Gene3D G3DSA:3.40.630.10 64 355 1.1E-45 T 22-04-2016 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 Pfam PF00246 Zinc carboxypeptidase 80 248 6.9E-20 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 SUPERFAMILY SSF53187 74 363 2.55E-46 T 22-04-2016 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 SMART SM00631 73 303 2.4E-4 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS00820 dc2d69b796d411e6d3dc5dc346d0eb7b 610 PANTHER PTHR11705 36 393 1.0E-87 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PANTHER PTHR22939 1 384 1.7E-192 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 SUPERFAMILY SSF50494 37 262 1.11E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Gene3D G3DSA:2.30.42.10 268 364 2.2E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Gene3D G3DSA:2.40.10.10 156 267 5.6E-43 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 SUPERFAMILY SSF50156 224 349 3.81E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Gene3D G3DSA:2.30.42.10 383 446 2.4E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 163 187 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PRINTS PR00834 HtrA/DegQ protease family signature 306 318 4.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Pfam PF13365 Trypsin-like peptidase domain 92 227 1.8E-29 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 PANTHER PTHR22939:SF101 1 384 1.7E-192 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Pfam PF13180 PDZ domain 267 357 3.0E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Pfam PF13180 PDZ domain 379 429 1.8E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 SUPERFAMILY SSF50156 371 445 2.23E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 SMART SM00228 266 348 3.7E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 SMART SM00228 373 441 5.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 Gene3D G3DSA:2.40.10.10 37 154 2.4E-33 T 22-04-2016 SAMA_RS16035 2e7e9a46ab27718fb81092277379a2bd 449 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 447 2.2E-154 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 623 2.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Gene3D G3DSA:1.20.120.160 909 1014 4.4E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Pfam PF00512 His Kinase A (phospho-acceptor) domain 397 461 6.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SUPERFAMILY SSF55874 450 621 2.23E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SMART SM00448 773 890 1.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SMART SM00388 396 461 3.7E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Pfam PF00072 Response regulator receiver domain 775 888 2.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SUPERFAMILY SSF47384 383 462 4.71E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Gene3D G3DSA:3.30.450.20 256 377 9.1E-16 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 577 3.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 3.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 3.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 563 3.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SUPERFAMILY SSF47226 910 1014 1.11E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423 27 33 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423 238 627 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423 762 926 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SUPERFAMILY SSF52172 772 895 1.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 368 4.7E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423:SF382 27 33 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423:SF382 238 627 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 PANTHER PTHR24423:SF382 762 926 1.7E-157 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Gene3D G3DSA:1.10.287.130 388 457 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SUPERFAMILY SSF55785 239 354 1.45E-13 T 22-04-2016 IPR000014 PAS domain SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Pfam PF08448 PAS fold 262 360 1.1E-9 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Pfam PF01627 Hpt domain 933 1014 3.3E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 SMART SM00387 508 624 3.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Gene3D G3DSA:3.40.50.2300 772 894 1.2E-42 T 22-04-2016 SAMA_RS00340 91167f243396b3d7b3bb1b777d45e5b9 1021 Gene3D G3DSA:3.30.565.10 462 626 4.9E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 PANTHER PTHR11082 1 301 7.6E-181 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 PANTHER PTHR11082:SF26 1 301 7.6E-181 T 22-04-2016 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 Pfam PF01207 Dihydrouridine synthase (Dus) 4 293 4.8E-77 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 SUPERFAMILY SSF51395 2 303 1.35E-71 T 22-04-2016 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 PIRSF PIRSF006621 1 314 6.7E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 308 53.487 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 SAMA_RS06815 c061e3d41b92e10f52dde94e82ea7f90 317 Gene3D G3DSA:3.20.20.70 2 238 6.0E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 SUPERFAMILY SSF52540 6 203 2.37E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PANTHER PTHR10285 2 210 2.5E-90 T 22-04-2016 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 197 3.4E-46 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 TIGRFAM TIGR00235 udk: uridine kinase 1 210 7.7E-90 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 Gene3D G3DSA:3.40.50.300 3 203 4.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 Hamap MF_00551 Uridine kinase [udk]. 3 211 39.87 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 155 166 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 141 151 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 85 100 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 6 23 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 40 51 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS10675 385635a9b0b0862f683002e816e54291 212 PRINTS PR00988 Uridine kinase signature 177 190 7.2E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 PANTHER PTHR23091 1 146 3.3E-33 T 22-04-2016 SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 PANTHER PTHR23091:SF247 1 146 3.3E-33 T 22-04-2016 SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 141 1.8E-32 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 Gene3D G3DSA:3.40.630.30 2 146 3.9E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 SUPERFAMILY SSF55729 1 145 5.32E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS13560 72ba7f0002b0b7f2344f3a184dc59017 149 Pfam PF00583 Acetyltransferase (GNAT) family 45 120 1.5E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF55785 952 1063 2.09E-21 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF00563 EAL domain 1245 1477 8.2E-72 T 22-04-2016 IPR001633 EAL domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00267 1055 1227 4.4E-70 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF07494 Two component regulator propeller 583 605 0.0059 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF07494 Two component regulator propeller 89 111 0.0026 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF07494 Two component regulator propeller 538 561 0.0029 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF07494 Two component regulator propeller 357 376 0.0065 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF141868 1244 1490 5.75E-86 T 22-04-2016 IPR001633 EAL domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF08447 PAS fold 853 927 7.2E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 852 940 7.8E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 945 1062 6.9E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 PANTHER PTHR10799:SF774 998 1337 6.0E-88 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:3.30.450.20 808 937 2.0E-27 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF63829 261 283 6.15E-9 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00091 821 883 10.0 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00091 941 1007 4.3E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF63829 306 512 9.48E-10 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:2.120.10.30 448 561 5.4E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1066 1223 1.9E-52 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:2.120.10.30 118 170 2.3E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:2.120.10.30 50 117 4.6E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:2.120.10.30 301 332 2.3E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:3.30.450.20 938 1049 3.6E-21 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 PANTHER PTHR10799 998 1337 6.0E-88 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF55785 829 935 4.01E-17 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF63829 503 688 2.09E-10 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:3.20.20.450 1240 1490 4.5E-96 T 22-04-2016 IPR001633 EAL domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF63829 50 176 6.15E-9 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF63829 310 377 6.15E-9 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SUPERFAMILY SSF55073 1071 1227 1.18E-52 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00052 1237 1482 2.0E-113 T 22-04-2016 IPR001633 EAL domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF13426 PAS domain 953 1054 7.3E-10 T 22-04-2016 IPR000014 PAS domain SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Gene3D G3DSA:3.30.70.270 1068 1233 3.7E-60 T 22-04-2016 SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00086 890 933 2.5E-7 T 22-04-2016 IPR001610 PAC motif SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 SMART SM00086 1013 1055 0.0071 T 22-04-2016 IPR001610 PAC motif SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 Pfam PF07495 Y_Y_Y domain 718 755 3.7E-10 T 22-04-2016 IPR011123 Two component regulator three Y SAMA_RS17185 b5ac8e87d1dd1594d30a40ebef3d4688 1494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1065 1225 2.9E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.2E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 4.7E-43 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 3.4E-112 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 PANTHER PTHR30435:SF19 1 262 9.3E-133 T 22-04-2016 SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.8E-23 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 PANTHER PTHR30435 1 262 9.3E-133 T 22-04-2016 SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12105 0a1aa8df307be889271c879dff5c5290 262 SUPERFAMILY SSF117143 93 223 2.75E-34 T 22-04-2016 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 88 7.0E-35 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.8E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.687 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 PANTHER PTHR33398 2 88 3.2E-36 T 22-04-2016 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 Gene3D G3DSA:1.20.58.110 1 86 3.5E-30 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04810 8b8337f7d1754866e7aa94e815f871eb 88 SUPERFAMILY SSF46992 3 86 6.54E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 Pfam PF00158 Sigma-54 interaction domain 150 315 1.1E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 Pfam PF02954 Bacterial regulatory protein, Fis family 406 444 4.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 SUPERFAMILY SSF52172 31 194 1.49E-6 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 SMART SM00382 169 316 4.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 Gene3D G3DSA:3.40.50.300 146 321 3.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 PANTHER PTHR32071 148 444 5.3E-124 T 22-04-2016 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 Gene3D G3DSA:1.10.8.60 327 390 9.1E-18 T 22-04-2016 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 SUPERFAMILY SSF52540 148 388 3.22E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 SUPERFAMILY SSF46689 360 444 3.58E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS07385 9c35e8c5d0e31884dac661ae8c0686fe 447 Gene3D G3DSA:1.10.10.60 406 444 3.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00750 bbdbab8668417580021b9991589ac04d 266 SUPERFAMILY SSF48317 8 195 9.29E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS00750 bbdbab8668417580021b9991589ac04d 266 Pfam PF01569 PAP2 superfamily 80 193 6.1E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS00750 bbdbab8668417580021b9991589ac04d 266 Gene3D G3DSA:1.20.144.10 34 192 6.8E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS00750 bbdbab8668417580021b9991589ac04d 266 SMART SM00014 73 188 3.3E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 13 248 1.2E-78 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 Pfam PF13181 Tetratricopeptide repeat 50 76 0.02 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SMART SM00028 113 146 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SMART SM00028 79 112 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SMART SM00028 149 182 0.0043 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SMART SM00028 183 216 370.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SMART SM00028 45 78 0.14 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 SUPERFAMILY SSF48452 46 215 1.19E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 PANTHER PTHR23083 35 262 1.0E-26 T 22-04-2016 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 Gene3D G3DSA:1.25.40.10 47 260 7.9E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12380 292381c0b41ab408fbf0d2db235bbf53 262 Pfam PF13424 Tetratricopeptide repeat 115 178 2.9E-9 T 22-04-2016 SAMA_RS16575 9529833b59cbf1499c2e4772b3b28364 373 PANTHER PTHR31970:SF2 9 366 3.4E-196 T 22-04-2016 SAMA_RS16575 9529833b59cbf1499c2e4772b3b28364 373 PANTHER PTHR31970 9 366 3.4E-196 T 22-04-2016 SAMA_RS16575 9529833b59cbf1499c2e4772b3b28364 373 Pfam PF16983 Molybdate transporter of MFS superfamily 11 124 2.1E-28 T 22-04-2016 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 SAMA_RS16575 9529833b59cbf1499c2e4772b3b28364 373 Pfam PF16983 Molybdate transporter of MFS superfamily 202 320 8.3E-23 T 22-04-2016 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 Pfam PF03466 LysR substrate binding domain 96 285 8.9E-10 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 PANTHER PTHR30293 2 300 7.2E-189 T 22-04-2016 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 Gene3D G3DSA:3.40.190.10 123 227 1.3E-4 T 22-04-2016 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 PANTHER PTHR30293:SF2 2 300 7.2E-189 T 22-04-2016 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 Gene3D G3DSA:1.10.10.10 3 81 4.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 SUPERFAMILY SSF53850 93 285 3.44E-20 T 22-04-2016 SAMA_RS04550 25d1f28fb97aceb1b6be1c7387449d10 302 SUPERFAMILY SSF46785 2 85 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 170 191 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 107 124 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 72 93 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 24 46 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 151 169 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PRINTS PR00721 Stomatin signature 127 150 5.3E-24 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PANTHER PTHR10264:SF27 1 291 2.0E-116 T 22-04-2016 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 SMART SM00244 17 175 2.3E-54 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 Pfam PF01145 SPFH domain / Band 7 family 21 192 2.5E-30 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 PANTHER PTHR10264 1 291 2.0E-116 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 SUPERFAMILY SSF117892 48 182 1.44E-40 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02245 303c20b2521edd7e904406c10ec5c8ce 304 Pfam PF16200 C-terminal region of band_7 241 296 1.1E-9 T 22-04-2016 IPR032435 Band 7, C-terminal extension SAMA_RS14865 8a06d4cc5b3a9a27148e1f536dbc948f 306 SUPERFAMILY SSF54001 69 237 8.73E-15 T 22-04-2016 SAMA_RS14865 8a06d4cc5b3a9a27148e1f536dbc948f 306 Gene3D G3DSA:2.30.30.330 69 204 5.1E-13 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PANTHER PTHR10046 1 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 SMART SM00464 10 202 2.7E-83 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.4E-41 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Gene3D G3DSA:1.10.8.60 500 583 8.2E-34 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 SUPERFAMILY SSF54211 595 770 1.93E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 5.1E-56 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 5.1E-56 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 5.1E-56 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 5.1E-56 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 5.1E-56 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 488 8.5E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 SUPERFAMILY SSF88697 10 201 6.46E-53 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 SUPERFAMILY SSF52540 314 587 2.94E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.9E-99 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Gene3D G3DSA:3.30.230.10 590 771 2.9E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 PANTHER PTHR10046:SF43 1 776 0.0 T 22-04-2016 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Gene3D G3DSA:3.40.50.300 312 499 1.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 Hamap MF_01973 Lon protease [lon]. 11 772 72.514 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SAMA_RS06430 0243f5db014d9632beb452759c96af55 785 SMART SM00382 348 492 2.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 525 56.641 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Gene3D G3DSA:3.40.50.880 3 223 8.6E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 7.750217E-6 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00097 Anthranilate synthase component II signature 80 91 7.750217E-6 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00097 Anthranilate synthase component II signature 53 62 7.750217E-6 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 SUPERFAMILY SSF52402 197 420 1.17E-59 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 SUPERFAMILY SSF52317 7 237 4.25E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Pfam PF02540 NAD synthase 216 289 1.4E-6 T 22-04-2016 IPR022310 NAD/GMP synthase SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 204 4.4E-80 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Gene3D G3DSA:3.40.50.620 224 399 5.9E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 SUPERFAMILY SSF54810 405 525 4.05E-51 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Pfam PF00958 GMP synthase C terminal domain 433 524 1.8E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PANTHER PTHR11922 3 522 2.5E-291 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Pfam PF00117 Glutamine amidotransferase class-I 11 200 3.4E-39 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PANTHER PTHR11922:SF2 3 522 2.5E-291 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 1.5E-155 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 Gene3D G3DSA:3.30.300.10 401 525 2.8E-53 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 6.585292E-7 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 6.585292E-7 T 22-04-2016 SAMA_RS12335 c5c5fb3245711635677f86b732ea6953 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 6.585292E-7 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 Gene3D G3DSA:3.30.70.270 346 511 3.0E-42 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 508 1.6E-34 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 Pfam PF05228 CHASE4 domain 57 206 1.6E-26 T 22-04-2016 IPR007892 CHASE4 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 PANTHER PTHR10799:SF750 377 512 3.1E-17 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 PANTHER PTHR10799:SF750 151 303 3.1E-17 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 340 511 3.9E-38 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 PANTHER PTHR10799 377 512 3.1E-17 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 PANTHER PTHR10799 151 303 3.1E-17 T 22-04-2016 SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 SMART SM00267 333 512 2.5E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13670 26a4ec9537b8a773cc5ac1cbaf6fab01 524 SUPERFAMILY SSF55073 349 511 3.37E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS10080 231b7730e3103615fd63cb4be6b10a8b 146 Pfam PF03692 Putative zinc- or iron-chelating domain 21 89 4.5E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SAMA_RS10080 231b7730e3103615fd63cb4be6b10a8b 146 PANTHER PTHR37421:SF1 1 145 1.7E-63 T 22-04-2016 SAMA_RS10080 231b7730e3103615fd63cb4be6b10a8b 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 142 37.882 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 SAMA_RS10080 231b7730e3103615fd63cb4be6b10a8b 146 PIRSF PIRSF006173 1 142 9.0E-61 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 SAMA_RS10080 231b7730e3103615fd63cb4be6b10a8b 146 PANTHER PTHR37421 1 145 1.7E-63 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 PANTHER PTHR32294 2 1157 0.0 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Gene3D G3DSA:2.40.50.140 979 1074 6.2E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 PANTHER PTHR32294:SF0 2 1157 0.0 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Gene3D G3DSA:3.20.20.140 6 256 2.1E-17 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Pfam PF14579 Helix-hairpin-helix motif 808 896 2.3E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 SMART SM00481 7 74 1.1E-22 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Gene3D G3DSA:1.10.150.280 836 881 5.5E-7 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Pfam PF02811 PHP domain 8 172 1.1E-39 T 22-04-2016 IPR004013 PHP domain GO:0003824 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 SUPERFAMILY SSF89550 6 263 4.71E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 4.5E-175 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 SUPERFAMILY SSF160975 837 881 2.22E-6 T 22-04-2016 SAMA_RS06045 c6032aad09653d220153462adca2de06 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1029 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 141 1.5E-16 T 22-04-2016 IPR000014 PAS domain SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 263 2.5E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SMART SM00283 246 433 4.3E-14 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 PANTHER PTHR24422:SF10 8 432 3.4E-159 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SUPERFAMILY SSF55785 152 257 2.09E-24 T 22-04-2016 IPR000014 PAS domain SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 PANTHER PTHR24422 8 432 3.4E-159 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Gene3D G3DSA:1.10.287.950 254 432 8.5E-44 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Gene3D G3DSA:3.30.450.20 29 134 3.6E-23 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Gene3D G3DSA:3.30.450.20 153 253 9.4E-23 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SUPERFAMILY SSF58104 249 432 3.27E-49 T 22-04-2016 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SMART SM00091 140 210 0.19 T 22-04-2016 IPR000014 PAS domain SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SMART SM00091 20 88 0.0012 T 22-04-2016 IPR000014 PAS domain SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SMART SM00086 215 257 0.0076 T 22-04-2016 IPR001610 PAC motif SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SMART SM00086 93 135 0.18 T 22-04-2016 IPR001610 PAC motif SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 432 5.8E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Pfam PF08447 PAS fold 165 250 9.7E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 Pfam PF08447 PAS fold 43 127 3.4E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS03470 d3a0102b2c943648ca5aab6028fcd272 438 SUPERFAMILY SSF55785 29 132 9.42E-23 T 22-04-2016 IPR000014 PAS domain SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 SUPERFAMILY SSF52540 5 219 4.18E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 SMART SM00382 33 218 5.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 PANTHER PTHR24220:SF430 6 219 2.3E-94 T 22-04-2016 SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 Gene3D G3DSA:3.40.50.300 2 219 8.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 PANTHER PTHR24220 6 219 2.3E-94 T 22-04-2016 SAMA_RS15425 37238427d4f8ad641f5d6f6ad9dbe24b 219 Pfam PF00005 ABC transporter 24 169 2.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 SUPERFAMILY SSF143724 109 315 1.02E-59 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Gene3D G3DSA:3.30.870.10 502 683 7.7E-69 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Pfam PF02503 Polyphosphate kinase middle domain 121 320 5.6E-45 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 SUPERFAMILY SSF140356 6 107 5.1E-32 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Gene3D G3DSA:3.30.870.10 323 501 3.9E-65 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 683 29.614 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 PIRSF PIRSF015589 2 698 4.6E-235 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 SUPERFAMILY SSF56024 324 493 1.68E-48 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 679 3.5E-251 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 3.6E-141 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Pfam PF13089 Polyphosphate kinase N-terminal domain 9 111 2.4E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 Gene3D G3DSA:3.30.1840.10 108 302 2.7E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 PANTHER PTHR30218 8 704 2.0E-293 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 PANTHER PTHR30218:SF0 8 704 2.0E-293 T 22-04-2016 SAMA_RS10495 9bfcf91a3551dbbc2aa681574ff4dd8b 719 SUPERFAMILY SSF56024 502 684 2.36E-68 T 22-04-2016 SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 SUPERFAMILY SSF81901 44 222 4.84E-27 T 22-04-2016 SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 Pfam PF08238 Sel1 repeat 123 147 1.6 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 Pfam PF08238 Sel1 repeat 49 84 6.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 Pfam PF08238 Sel1 repeat 91 116 0.54 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 SMART SM00671 121 157 14.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 SMART SM00671 49 84 1.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 SMART SM00671 85 120 8.4 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 Gene3D G3DSA:1.25.40.10 43 152 1.8E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 Gene3D G3DSA:1.25.40.10 177 227 2.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15665 03ec78a918cc36feb31e4becfb8e38ca 258 PANTHER PTHR11102 40 209 2.3E-16 T 22-04-2016 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 Gene3D G3DSA:3.30.1400.10 216 348 7.3E-52 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 PANTHER PTHR38685 1 348 1.1E-69 T 22-04-2016 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 219 347 1.0E-65 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 SUPERFAMILY SSF64383 216 348 9.94E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 219 344 3.0E-46 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 348 26.568 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 SMART SM00771 216 346 7.2E-68 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SAMA_RS07880 08804c5844f3b0da2eef4d35768d2d8e 350 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 94 346 1.9E-52 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.1E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 2.0E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.0E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.0E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.0E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.0E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PANTHER PTHR11404 1 193 2.6E-110 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PIRSF PIRSF000349 1 194 3.8E-84 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 SUPERFAMILY SSF54719 84 193 3.14E-43 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 PANTHER PTHR11404:SF8 1 193 2.6E-110 T 22-04-2016 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 SUPERFAMILY SSF46609 1 84 1.23E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 191 1.4E-38 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SAMA_RS10045 1041b2633f0617f82ffff8a7989e4b46 194 Gene3D G3DSA:1.10.287.990 20 82 5.2E-24 T 22-04-2016 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 14 299 52.31 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 Gene3D G3DSA:3.90.226.10 20 236 1.8E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 TIGRFAM TIGR01929 menB: naphthoate synthase 22 296 1.9E-118 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 PANTHER PTHR11941:SF20 10 293 2.7E-156 T 22-04-2016 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 293 2.7E-48 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 SUPERFAMILY SSF52096 15 298 3.09E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 PANTHER PTHR11941 10 293 2.7E-156 T 22-04-2016 SAMA_RS18905 43af55bbf2868f8ef5bc001b3c60f17d 300 Gene3D G3DSA:1.10.12.10 239 288 6.9E-28 T 22-04-2016 IPR014748 Crontonase, C-terminal SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-29 T 22-04-2016 SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 PANTHER PTHR19836 1 101 2.7E-58 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.453 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.8E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01190 bfa1514ab9578615d4dead16edaee273 101 SUPERFAMILY SSF57716 2 101 4.85E-36 T 22-04-2016 SAMA_RS17920 a11ecdb122ae8ed8d9182cfab1d037d9 213 SUPERFAMILY SSF53335 68 202 3.14E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17920 a11ecdb122ae8ed8d9182cfab1d037d9 213 Gene3D G3DSA:3.40.50.150 48 90 1.6E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17920 a11ecdb122ae8ed8d9182cfab1d037d9 213 Pfam PF13489 Methyltransferase domain 64 198 2.7E-25 T 22-04-2016 SAMA_RS17920 a11ecdb122ae8ed8d9182cfab1d037d9 213 Gene3D G3DSA:3.40.50.150 91 199 1.5E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 PANTHER PTHR23514:SF7 28 402 2.4E-115 T 22-04-2016 SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 PANTHER PTHR23514 28 402 2.4E-115 T 22-04-2016 SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 399 1.2E-96 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 Pfam PF07690 Major Facilitator Superfamily 25 357 7.4E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 Gene3D G3DSA:1.20.1250.20 25 207 1.8E-18 T 22-04-2016 SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 SUPERFAMILY SSF103473 16 409 4.19E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02995 d3773cc5ae5b512649e97901046d4efd 413 Gene3D G3DSA:1.20.1250.20 226 404 2.4E-12 T 22-04-2016 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 PANTHER PTHR30061 9 464 9.7E-92 T 22-04-2016 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 Pfam PF01547 Bacterial extracellular solute-binding protein 35 359 4.4E-20 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 Gene3D G3DSA:3.40.190.10 32 154 2.8E-11 T 22-04-2016 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 SUPERFAMILY SSF53850 23 388 1.09E-39 T 22-04-2016 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 PANTHER PTHR30061:SF17 9 464 9.7E-92 T 22-04-2016 SAMA_RS12420 a023d5719077c9b3e3fd2cb8c6c507b0 464 Gene3D G3DSA:3.40.190.10 155 376 1.3E-22 T 22-04-2016 SAMA_RS00400 e8cb48b2410196f6233ec4a603f71643 324 Gene3D G3DSA:3.40.50.1820 59 317 7.7E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00400 e8cb48b2410196f6233ec4a603f71643 324 PANTHER PTHR10907:SF60 40 257 3.6E-73 T 22-04-2016 SAMA_RS00400 e8cb48b2410196f6233ec4a603f71643 324 SUPERFAMILY SSF53474 55 316 1.53E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00400 e8cb48b2410196f6233ec4a603f71643 324 PANTHER PTHR10907 40 257 3.6E-73 T 22-04-2016 SAMA_RS00400 e8cb48b2410196f6233ec4a603f71643 324 Pfam PF00756 Putative esterase 69 255 7.9E-13 T 22-04-2016 IPR000801 Putative esterase SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 SUPERFAMILY SSF48452 35 116 3.2E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 PANTHER PTHR23083 35 116 3.4E-13 T 22-04-2016 SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 SMART SM00028 35 68 3.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 SMART SM00028 69 102 7.6E-9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 Pfam PF00515 Tetratricopeptide repeat 69 102 2.1E-11 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SAMA_RS03750 8afab11ad969c105f01fa791d45adf3f 161 Gene3D G3DSA:1.25.40.10 35 116 1.4E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 Gene3D G3DSA:3.40.50.1820 342 656 1.7E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 PANTHER PTHR11731 23 670 8.1E-147 T 22-04-2016 SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 SUPERFAMILY SSF53474 403 658 5.12E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 PANTHER PTHR11731:SF75 23 670 8.1E-147 T 22-04-2016 SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 Pfam PF00326 Prolyl oligopeptidase family 454 659 1.2E-44 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 Gene3D G3DSA:2.130.10.10 120 341 7.8E-15 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS07210 f83086bfabe0242ab3629a0160d8849c 686 SUPERFAMILY SSF82171 121 349 9.02E-15 T 22-04-2016 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 PANTHER PTHR10804 7 21 6.8E-66 T 22-04-2016 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 PANTHER PTHR10804 150 391 6.8E-66 T 22-04-2016 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 330 342 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 Gene3D G3DSA:3.40.350.10 14 165 5.6E-23 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 SUPERFAMILY SSF55920 171 392 1.96E-72 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 PANTHER PTHR10804:SF86 7 21 6.8E-66 T 22-04-2016 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 PANTHER PTHR10804:SF86 150 391 6.8E-66 T 22-04-2016 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 SUPERFAMILY SSF53092 16 167 1.74E-23 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 Pfam PF00557 Metallopeptidase family M24 177 384 2.7E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 168 6.4E-19 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SAMA_RS03630 bc91197099745f0edde2e2a12f41c989 403 Gene3D G3DSA:3.90.230.10 170 396 1.3E-67 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 Gene3D G3DSA:3.30.565.10 281 424 1.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SUPERFAMILY SSF55874 270 419 1.14E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SMART SM00388 216 280 8.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PANTHER PTHR24423:SF556 156 426 6.8E-71 T 22-04-2016 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PANTHER PTHR24423:SF556 72 105 6.8E-71 T 22-04-2016 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SMART SM00304 162 215 1.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 280 2.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SUPERFAMILY SSF158472 164 211 7.19E-8 T 22-04-2016 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SMART SM00387 325 427 7.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PANTHER PTHR24423 156 426 6.8E-71 T 22-04-2016 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 PANTHER PTHR24423 72 105 6.8E-71 T 22-04-2016 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 Gene3D G3DSA:1.10.287.130 209 276 1.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 Pfam PF00672 HAMP domain 144 211 2.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 SUPERFAMILY SSF47384 199 281 1.82E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18375 36f66393526faf17247caf06d2e8d07b 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 417 1.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05080 6fb26c0985268494b3280b87ab9c65b4 269 Gene3D G3DSA:2.40.230.20 22 93 8.7E-7 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS05080 6fb26c0985268494b3280b87ab9c65b4 269 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 36 269 2.6E-54 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS05080 6fb26c0985268494b3280b87ab9c65b4 269 SUPERFAMILY SSF111364 28 269 3.27E-26 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF47226 1044 1150 4.58E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00448 727 845 2.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00448 873 986 5.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF47384 470 551 4.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 652 4.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 691 4.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 666 4.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 710 4.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 338 472 3.5E-13 T 22-04-2016 IPR000014 PAS domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF55785 347 473 5.48E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM01079 34 224 9.8E-55 T 22-04-2016 IPR006189 CHASE domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00086 423 465 0.0036 T 22-04-2016 IPR001610 PAC motif SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423:SF486 333 716 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423:SF486 1 9 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423:SF486 771 991 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF55874 539 708 2.75E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:3.30.565.10 551 709 1.8E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF00072 Response regulator receiver domain 729 840 4.7E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF00072 Response regulator receiver domain 876 985 5.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF52172 725 853 1.57E-25 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00387 597 713 5.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:3.40.50.2300 871 992 9.2E-40 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:3.40.50.2300 725 854 9.2E-27 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423 333 716 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423 1 9 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 PANTHER PTHR24423 771 991 2.1E-169 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:1.10.287.130 490 546 9.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00388 485 550 5.6E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SUPERFAMILY SSF52172 873 994 5.98E-39 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:1.20.120.160 1053 1144 2.1E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 SMART SM00091 335 400 2.9E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF13426 PAS domain 347 464 1.3E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Gene3D G3DSA:3.30.450.20 338 489 3.5E-19 T 22-04-2016 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF03924 CHASE domain 37 221 4.0E-38 T 22-04-2016 IPR006189 CHASE domain SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 550 7.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03925 df081d389ae21de6edd9952c5d4bbc16 1236 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 710 7.2E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16055 e13b2c4caa5610ffb63e9958ce6ec33f 96 SUPERFAMILY SSF52091 5 92 2.94E-16 T 22-04-2016 IPR002645 STAS domain SAMA_RS16055 e13b2c4caa5610ffb63e9958ce6ec33f 96 Pfam PF13466 STAS domain 11 88 2.7E-17 T 22-04-2016 IPR002645 STAS domain SAMA_RS16055 e13b2c4caa5610ffb63e9958ce6ec33f 96 Gene3D G3DSA:3.30.750.24 10 92 1.7E-15 T 22-04-2016 IPR002645 STAS domain SAMA_RS16055 e13b2c4caa5610ffb63e9958ce6ec33f 96 PANTHER PTHR35849 7 96 4.9E-22 T 22-04-2016 SAMA_RS16055 e13b2c4caa5610ffb63e9958ce6ec33f 96 PANTHER PTHR35849:SF1 7 96 4.9E-22 T 22-04-2016 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PIRSF PIRSF002401 1 374 3.4E-133 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PANTHER PTHR11702 1 378 7.7E-182 T 22-04-2016 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PANTHER PTHR11702:SF3 1 378 7.7E-182 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 SUPERFAMILY SSF52540 151 336 6.09E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.637 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 SUPERFAMILY SSF82051 2 157 5.1E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 Pfam PF01018 GTP1/OBG 3 156 5.1E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 Pfam PF01926 50S ribosome-binding GTPase 161 284 6.4E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 Gene3D G3DSA:3.40.50.300 156 340 4.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 9.1E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SAMA_RS14770 a9d9dbb1c000fbf819e0be153b0639c0 389 Gene3D G3DSA:2.70.210.12 2 155 1.1E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 Gene3D G3DSA:3.40.309.10 270 469 2.1E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 6.3E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 Gene3D G3DSA:3.40.605.10 18 269 1.4E-89 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 SUPERFAMILY SSF53720 14 497 3.01E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 SAMA_RS17870 14daaed1307f22d3158395f2881f27ee 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 448 4.5E-99 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 PIRSF PIRSF006066 1 453 4.6E-67 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 PANTHER PTHR33362:SF7 1 166 3.3E-165 T 22-04-2016 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 PANTHER PTHR33362:SF7 187 450 3.3E-165 T 22-04-2016 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 442 3.4E-88 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 PANTHER PTHR33362 1 166 3.3E-165 T 22-04-2016 SAMA_RS13265 341041383d497d6d3a9fef5f0449c7f4 453 PANTHER PTHR33362 187 450 3.3E-165 T 22-04-2016 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.7E-70 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 SUPERFAMILY SSF55973 3 109 1.65E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Gene3D G3DSA:3.30.300.10 244 379 6.9E-71 T 22-04-2016 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.9E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 378 7.2E-195 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Gene3D G3DSA:3.30.300.10 11 135 5.0E-50 T 22-04-2016 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 PANTHER PTHR11964 1 376 9.7E-285 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 SUPERFAMILY SSF55973 233 379 7.85E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.605 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 4.2E-43 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 SUPERFAMILY SSF55973 111 232 8.24E-50 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 Gene3D G3DSA:3.30.300.10 136 233 2.3E-41 T 22-04-2016 SAMA_RS14435 aa58ab9b09b0aa207fdd9c567dca7bf5 383 PIRSF PIRSF000497 1 381 2.0E-172 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 211 36.247 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 Gene3D G3DSA:3.40.50.150 19 208 1.3E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 209 3.9E-71 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 PANTHER PTHR11579 16 209 2.1E-76 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 208 1.5E-64 T 22-04-2016 SAMA_RS05430 4bec9aec28fb1e32c43cf60588b2588a 211 SUPERFAMILY SSF53335 18 208 3.68E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 SUPERFAMILY SSF53474 7 264 3.0E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 PANTHER PTHR10992 4 268 4.3E-33 T 22-04-2016 SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 3 267 31.779 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 Pfam PF12697 Alpha/beta hydrolase family 10 260 1.2E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 PANTHER PTHR10992:SF698 4 268 4.3E-33 T 22-04-2016 SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 Gene3D G3DSA:3.40.50.1820 7 264 1.7E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18000 d756146b7f1a0651bd6bb36825f2636e 277 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 7 264 1.7E-68 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS04130 377272c60b385784b08cfd554053614d 416 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 279 290 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 SAMA_RS04130 377272c60b385784b08cfd554053614d 416 Gene3D G3DSA:2.40.70.10 210 409 5.8E-18 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 34 45 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 SAMA_RS04130 377272c60b385784b08cfd554053614d 416 SUPERFAMILY SSF50630 10 122 1.22E-36 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 SUPERFAMILY SSF50630 168 415 1.22E-36 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 Gene3D G3DSA:2.40.70.10 15 121 2.8E-20 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 Gene3D G3DSA:2.40.70.10 169 209 2.8E-20 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 Pfam PF00026 Eukaryotic aspartyl protease 216 309 1.8E-4 T 22-04-2016 IPR033121 Peptidase family A1 domain SAMA_RS04130 377272c60b385784b08cfd554053614d 416 Pfam PF00026 Eukaryotic aspartyl protease 19 124 1.3E-7 T 22-04-2016 IPR033121 Peptidase family A1 domain SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 PANTHER PTHR30537 1 287 6.5E-142 T 22-04-2016 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 Pfam PF03466 LysR substrate binding domain 87 287 3.4E-43 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 Gene3D G3DSA:1.10.10.10 3 85 1.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 Gene3D G3DSA:3.40.190.10 92 176 1.0E-20 T 22-04-2016 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 PANTHER PTHR30537:SF10 1 287 6.5E-142 T 22-04-2016 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 SUPERFAMILY SSF53850 88 288 1.07E-45 T 22-04-2016 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 1.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 Gene3D G3DSA:3.40.190.10 177 252 6.8E-19 T 22-04-2016 SAMA_RS00025 67cb8835145d2ea779231fbcfa1e6175 290 SUPERFAMILY SSF46785 1 87 8.84E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 Pfam PF00085 Thioredoxin 38 138 2.8E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 PRINTS PR00421 Thioredoxin family signature 104 115 8.7E-8 T 22-04-2016 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 PRINTS PR00421 Thioredoxin family signature 56 64 8.7E-8 T 22-04-2016 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 PRINTS PR00421 Thioredoxin family signature 64 73 8.7E-8 T 22-04-2016 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 Gene3D G3DSA:3.40.30.10 33 138 3.9E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 4.6E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 PANTHER PTHR10438:SF266 25 138 2.8E-46 T 22-04-2016 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 SUPERFAMILY SSF52833 23 138 4.55E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS03880 723c1495cf7ccba1bff4dbdc2a7199f1 140 PANTHER PTHR10438 25 138 2.8E-46 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 SUPERFAMILY SSF51905 374 437 1.34E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 SUPERFAMILY SSF51905 4 116 1.34E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 SUPERFAMILY SSF51905 145 274 1.34E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Pfam PF02910 Fumarate reductase flavoprotein C-term 469 598 2.3E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 598 7.3E-215 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Gene3D G3DSA:3.90.700.10 258 365 1.2E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Gene3D G3DSA:4.10.80.40 549 584 7.0E-12 T 22-04-2016 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 PANTHER PTHR11632 136 590 1.5E-274 T 22-04-2016 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 SUPERFAMILY SSF56425 251 370 6.28E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 PANTHER PTHR11632 4 114 1.5E-274 T 22-04-2016 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Pfam PF00890 FAD binding domain 7 411 4.2E-120 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 SUPERFAMILY SSF46977 459 653 6.8E-54 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 PANTHER PTHR11632:SF5 4 114 1.5E-274 T 22-04-2016 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 PANTHER PTHR11632:SF5 136 590 1.5E-274 T 22-04-2016 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Gene3D G3DSA:1.20.58.100 442 548 5.1E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Gene3D G3DSA:3.50.50.60 5 257 1.1E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS16770 fe97e7ce264b4014314fef236cb911c5 679 Gene3D G3DSA:3.50.50.60 366 431 1.1E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS11400 e39ca341660ab447bce5c258b5b82191 71 Pfam PF11127 Protein of unknown function (DUF2892) 2 63 4.1E-16 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 PANTHER PTHR10982:SF11 192 534 7.6E-273 T 22-04-2016 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 PANTHER PTHR10982:SF11 6 162 7.6E-273 T 22-04-2016 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 75 512 8.3E-212 T 22-04-2016 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA01003 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 Pfam PF03060 Nitronate monooxygenase 87 374 5.2E-9 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 PANTHER PTHR10982 192 534 7.6E-273 T 22-04-2016 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 PANTHER PTHR10982 6 162 7.6E-273 T 22-04-2016 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 SUPERFAMILY SSF51412 88 382 6.1E-20 T 22-04-2016 SAMA_RS05830 dad075d922cae744a5a3af41d4d5e4a9 537 Gene3D G3DSA:3.20.20.70 89 352 7.4E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF08448 PAS fold 464 572 5.9E-19 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00388 721 786 7.0E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF55785 568 699 1.27E-20 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.40.50.2300 965 1088 1.1E-26 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF55785 446 569 2.97E-20 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF55874 775 947 1.1E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00091 458 524 7.0E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00091 583 651 4.8E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00448 967 1084 6.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00448 1109 1222 6.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.40.50.2300 1111 1234 5.5E-40 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.30.450.20 446 561 2.1E-20 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00086 529 571 180.0 T 22-04-2016 IPR001610 PAC motif SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00086 658 701 1.2E-6 T 22-04-2016 IPR001610 PAC motif SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF52172 966 1089 8.25E-28 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF47384 706 787 6.47E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 909 927 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 888 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 902 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 946 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SUPERFAMILY SSF52172 1111 1233 1.38E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.30.450.20 214 346 1.6E-5 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PANTHER PTHR24423:SF486 137 952 1.0E-188 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PANTHER PTHR24423:SF486 1008 1233 1.0E-188 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:1.10.287.130 721 772 4.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 833 948 8.7E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF08447 PAS fold 606 695 2.5E-21 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.30.565.10 773 947 1.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PANTHER PTHR24423 137 952 1.0E-188 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 PANTHER PTHR24423 1008 1233 1.0E-188 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 SMART SM00387 833 949 9.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 457 578 2.9E-16 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 707 3.7E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF00512 His Kinase A (phospho-acceptor) domain 722 786 6.8E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Gene3D G3DSA:3.30.450.20 562 716 1.5E-34 T 22-04-2016 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF00072 Response regulator receiver domain 1111 1222 1.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16320 ba310cdf44f9e2f31ada014abc8cc59e 1236 Pfam PF00072 Response regulator receiver domain 970 1084 1.1E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 Pfam PF00534 Glycosyl transferases group 1 200 340 4.6E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 SUPERFAMILY SSF53756 5 354 1.53E-49 T 22-04-2016 SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 PANTHER PTHR12526 4 339 3.7E-75 T 22-04-2016 SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 Gene3D G3DSA:3.40.50.2000 185 343 4.4E-16 T 22-04-2016 SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 Pfam PF13439 Glycosyltransferase Family 4 16 185 2.0E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SAMA_RS00525 b629a98630e2bc4be2400359a24fa941 365 PANTHER PTHR12526:SF141 4 339 3.7E-75 T 22-04-2016 SAMA_RS16545 f47fc2c7ffdd2cefc397f6d0d92aa338 328 PANTHER PTHR34856:SF2 1 326 2.4E-95 T 22-04-2016 SAMA_RS16545 f47fc2c7ffdd2cefc397f6d0d92aa338 328 Pfam PF03916 Polysulphide reductase, NrfD 10 325 7.7E-61 T 22-04-2016 IPR005614 NrfD family SAMA_RS16545 f47fc2c7ffdd2cefc397f6d0d92aa338 328 PANTHER PTHR34856 1 326 2.4E-95 T 22-04-2016 SAMA_RS16545 f47fc2c7ffdd2cefc397f6d0d92aa338 328 Gene3D G3DSA:1.20.1630.10 15 201 5.0E-15 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 SUPERFAMILY SSF50692 811 949 8.59E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 SUPERFAMILY SSF50692 751 781 8.59E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615 405 598 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615 730 949 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615 10 381 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:2.20.25.90 60 115 5.8E-18 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Pfam PF00384 Molybdopterin oxidoreductase 118 568 5.6E-54 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615:SF140 405 598 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615:SF140 730 949 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 PANTHER PTHR11615:SF140 10 381 0.0 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 SMART SM00926 61 115 1.0E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Pfam PF01568 Molydopterin dinucleotide binding domain 815 941 7.3E-22 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:3.40.228.10 191 369 8.7E-65 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 2.1E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 SUPERFAMILY SSF53706 59 644 1.22E-199 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:2.40.40.20 810 949 5.1E-54 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:2.40.40.20 767 778 5.1E-54 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:2.40.40.20 640 673 5.1E-54 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:3.40.50.740 118 189 1.1E-58 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:3.40.50.740 370 393 1.1E-58 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 Gene3D G3DSA:3.40.50.740 445 613 1.1E-58 T 22-04-2016 SAMA_RS18770 1c4bfe38da9f5d5987c9afe7a89b6755 949 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PANTHER PTHR30603:SF15 8 326 1.0E-193 T 22-04-2016 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Pfam PF04539 Sigma-70 region 3 171 245 8.5E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Gene3D G3DSA:1.10.10.10 164 213 2.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Pfam PF04542 Sigma-70 region 2 91 160 3.4E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 115 128 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PANTHER PTHR30603 8 326 1.0E-193 T 22-04-2016 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 313 4.1E-36 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Gene3D G3DSA:1.10.10.10 256 319 6.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Pfam PF04545 Sigma-70, region 4 259 312 2.1E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PRINTS PR00046 Major sigma-70 factor signature 115 128 3.7E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PRINTS PR00046 Major sigma-70 factor signature 263 275 3.7E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PRINTS PR00046 Major sigma-70 factor signature 284 299 3.7E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PRINTS PR00046 Major sigma-70 factor signature 299 310 3.7E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 PRINTS PR00046 Major sigma-70 factor signature 139 147 3.7E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 20 325 39.006 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 SUPERFAMILY SSF88659 222 319 1.25E-24 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Pfam PF00140 Sigma-70 factor, region 1.2 53 83 2.0E-10 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 284 310 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 SUPERFAMILY SSF88659 164 238 2.18E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 43 325 1.7E-137 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 SUPERFAMILY SSF88946 53 161 5.65E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS05440 575459f7d9ed5b73440c94ed952d57b8 327 Gene3D G3DSA:1.10.601.10 37 160 1.4E-56 T 22-04-2016 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 PANTHER PTHR10060 2 257 6.0E-130 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 Pfam PF01026 TatD related DNase 3 254 4.8E-78 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 1.2E-89 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 Gene3D G3DSA:3.20.20.140 2 254 9.3E-87 T 22-04-2016 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 PIRSF PIRSF005902 1 258 2.8E-81 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 PANTHER PTHR10060:SF20 2 257 6.0E-130 T 22-04-2016 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS10640 0ac7f9b9a43cc7a048b8b04f281600b8 262 SUPERFAMILY SSF51556 2 254 1.23E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 PANTHER PTHR12029 4 177 3.3E-41 T 22-04-2016 SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 235 2.2E-82 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.6E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 SUPERFAMILY SSF75217 4 165 1.05E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 PIRSF PIRSF004808 1 240 7.4E-75 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS06755 436b6b2cd3c3e92635fd0f3aab36b551 240 Gene3D G3DSA:3.40.1280.10 3 157 1.4E-34 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS10725 f2106e15a5f80c786fb7a9c012f1dd7d 102 PANTHER PTHR33473 12 102 1.3E-38 T 22-04-2016 SAMA_RS10725 f2106e15a5f80c786fb7a9c012f1dd7d 102 SUPERFAMILY SSF54736 19 101 1.1E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SAMA_RS10725 f2106e15a5f80c786fb7a9c012f1dd7d 102 Gene3D G3DSA:3.30.1390.10 7 102 3.9E-43 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SAMA_RS10725 f2106e15a5f80c786fb7a9c012f1dd7d 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 97 28.33 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SAMA_RS10725 f2106e15a5f80c786fb7a9c012f1dd7d 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 98 1.6E-35 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 9.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 PANTHER PTHR38445:SF2 1 123 8.2E-17 T 22-04-2016 SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 SUPERFAMILY SSF46785 8 82 7.29E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 Gene3D G3DSA:1.10.10.10 6 80 7.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 PANTHER PTHR38445 1 123 8.2E-17 T 22-04-2016 SAMA_RS18570 7a4cc1e24e7029960a1decd906eba0a1 123 SMART SM00345 19 78 5.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS09905 cc0a27f2f34360f96aa5d47de226ae31 208 Pfam PF01794 Ferric reductase like transmembrane component 55 160 3.9E-14 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain SAMA_RS09905 cc0a27f2f34360f96aa5d47de226ae31 208 PANTHER PTHR36964 1 207 4.9E-58 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 SUPERFAMILY SSF144083 256 319 4.32E-16 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 Gene3D G3DSA:1.20.58.340 247 321 5.5E-23 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 SUPERFAMILY SSF143865 4 254 4.18E-58 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 Gene3D G3DSA:3.30.460.20 15 129 6.1E-4 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 Pfam PF01544 CorA-like Mg2+ transporter protein 32 317 4.4E-70 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 PANTHER PTHR21535 52 321 5.9E-34 T 22-04-2016 SAMA_RS03415 9d3b51680541e70f518814ae1c388f81 321 Gene3D G3DSA:1.20.58.340 136 242 2.1E-18 T 22-04-2016 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 200 4.8E-26 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 110 200 17.413 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 PANTHER PTHR21256 10 205 3.3E-100 T 22-04-2016 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 SUPERFAMILY SSF141734 7 109 2.62E-44 T 22-04-2016 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 205 36.425 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 1.0E-23 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 SUPERFAMILY SSF101386 113 204 5.23E-20 T 22-04-2016 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.1E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SAMA_RS10185 61a19f52561d2dc500fb68a03d6c8ffd 208 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 137 203 4.0E-12 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 PANTHER PTHR33121 398 749 3.4E-91 T 22-04-2016 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SUPERFAMILY SSF141868 504 749 9.15E-88 T 22-04-2016 IPR001633 EAL domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Pfam PF00563 EAL domain 504 738 1.6E-72 T 22-04-2016 IPR001633 EAL domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Pfam PF08448 PAS fold 91 191 3.5E-12 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 485 2.3E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00052 497 743 2.4E-117 T 22-04-2016 IPR001633 EAL domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Gene3D G3DSA:3.30.70.270 328 494 1.2E-53 T 22-04-2016 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 PANTHER PTHR33121:SF13 398 749 3.4E-91 T 22-04-2016 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00086 151 193 84.0 T 22-04-2016 IPR001610 PAC motif SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00086 273 315 8.2E-7 T 22-04-2016 IPR001610 PAC motif SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 326 483 1.3E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00091 79 145 17.0 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00091 201 267 7.1E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SUPERFAMILY SSF55785 206 313 3.66E-30 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SMART SM00267 315 487 2.1E-60 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 205 321 2.2E-21 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 200 3.1E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Gene3D G3DSA:3.30.450.20 80 189 1.7E-13 T 22-04-2016 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Gene3D G3DSA:3.20.20.450 500 749 8.5E-97 T 22-04-2016 IPR001633 EAL domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Pfam PF00989 PAS fold 206 312 1.0E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SUPERFAMILY SSF55073 331 489 7.06E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 SUPERFAMILY SSF55785 90 200 6.63E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS12570 8deb1b1ca2883922fb6f06facec74485 751 Gene3D G3DSA:3.30.450.20 190 309 2.0E-28 T 22-04-2016 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 SUPERFAMILY SSF46689 3 67 4.79E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 SUPERFAMILY SSF48498 67 155 1.73E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 Gene3D G3DSA:1.10.10.60 3 50 2.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 46 9.8E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 Gene3D G3DSA:1.10.357.10 51 185 6.5E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 PANTHER PTHR30328 3 160 1.3E-22 T 22-04-2016 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 PANTHER PTHR30328:SF4 3 160 1.3E-22 T 22-04-2016 SAMA_RS04155 d2c1cf99ec4cf0b1950259942b489628 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 12 43 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 PANTHER PTHR15893 1 83 1.0E-52 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 SUPERFAMILY SSF110324 2 80 7.67E-35 T 22-04-2016 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 Gene3D G3DSA:2.40.50.100 20 81 2.3E-32 T 22-04-2016 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.6E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.962 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 Pfam PF01016 Ribosomal L27 protein 2 82 2.2E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14775 227716f6005ddb15256e363c88e15cb1 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 SUPERFAMILY SSF63380 23 125 1.55E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 SUPERFAMILY SSF54292 251 356 3.15E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Pfam PF00175 Oxidoreductase NAD-binding domain 134 242 1.8E-9 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 73 80 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 64 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 170 181 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 133 152 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 228 236 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PANTHER PTHR19370:SF89 23 280 6.2E-95 T 22-04-2016 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 SUPERFAMILY SSF52343 113 258 1.57E-32 T 22-04-2016 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 348 8.3E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Gene3D G3DSA:3.40.50.80 113 254 2.5E-30 T 22-04-2016 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PANTHER PTHR19370 23 280 6.2E-95 T 22-04-2016 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Gene3D G3DSA:2.40.30.10 22 112 1.0E-26 T 22-04-2016 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Pfam PF00970 Oxidoreductase FAD-binding domain 30 123 1.2E-17 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00406 Cytochrome B5 reductase signature 110 124 6.4E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00406 Cytochrome B5 reductase signature 73 80 6.4E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00406 Cytochrome B5 reductase signature 170 181 6.4E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00406 Cytochrome B5 reductase signature 228 236 6.4E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 PRINTS PR00406 Cytochrome B5 reductase signature 133 152 6.4E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 306 314 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SAMA_RS04680 d88773d4338ca30b3f38cd80910061cf 356 Gene3D G3DSA:3.10.20.30 255 354 6.0E-21 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS15365 88402911a5534f2ab16d42ca93ee8992 79 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 5 74 2.0E-29 T 22-04-2016 IPR020137 Uncharacterised protein family HI1736 SAMA_RS15365 88402911a5534f2ab16d42ca93ee8992 79 Pfam PF10688 Bacterial inner membrane protein 3 74 4.3E-8 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 Gene3D G3DSA:3.30.420.80 10 130 1.2E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.538 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 6.7E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 PIRSF PIRSF002131 1 130 2.8E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 SUPERFAMILY SSF53137 15 130 2.35E-47 T 22-04-2016 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 PANTHER PTHR11759 12 130 1.4E-70 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 Pfam PF00411 Ribosomal protein S11 20 129 2.1E-50 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01235 f4023021c19d81b335d11bdae99b3cd0 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 482 500 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 508 532 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 642 664 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 566 586 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 536 555 5.1E-49 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 SUPERFAMILY SSF50993 35 443 1.46E-95 T 22-04-2016 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PANTHER PTHR11757:SF3 1 715 0.0 T 22-04-2016 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 40 438 4.9E-104 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 SUPERFAMILY SSF53474 449 691 2.73E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 PANTHER PTHR11757 1 715 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 Gene3D G3DSA:2.130.10.120 107 442 3.5E-110 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 Gene3D G3DSA:3.40.50.1820 452 695 4.5E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00730 f44f167f4b6da93f9d1418d1e853904f 715 Pfam PF00326 Prolyl oligopeptidase family 497 713 4.6E-63 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS04010 eb9c477060fa5d6b89441af06265eed3 260 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 260 51.164 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS04010 eb9c477060fa5d6b89441af06265eed3 260 PANTHER PTHR34148 1 257 9.8E-59 T 22-04-2016 SAMA_RS04010 eb9c477060fa5d6b89441af06265eed3 260 Pfam PF02654 Cobalamin-5-phosphate synthase 14 251 5.9E-56 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS04010 eb9c477060fa5d6b89441af06265eed3 260 PANTHER PTHR34148:SF1 1 257 9.8E-59 T 22-04-2016 SAMA_RS04010 eb9c477060fa5d6b89441af06265eed3 260 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 13 253 7.7E-40 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS12360 2ccf289f77094805d20989b89e0bf8ee 206 PANTHER PTHR38035 2 205 4.1E-74 T 22-04-2016 SAMA_RS12360 2ccf289f77094805d20989b89e0bf8ee 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.0E-60 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain SAMA_RS12360 2ccf289f77094805d20989b89e0bf8ee 206 PIRSF PIRSF006170 1 206 1.1E-57 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 SAMA_RS12360 2ccf289f77094805d20989b89e0bf8ee 206 Gene3D G3DSA:1.25.40.10 93 187 7.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12360 2ccf289f77094805d20989b89e0bf8ee 206 SUPERFAMILY SSF48452 94 186 3.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.754 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Gene3D G3DSA:1.10.275.10 1 107 4.9E-35 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.9E-66 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 454 2.4E-188 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 SUPERFAMILY SSF48557 3 453 1.34E-140 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Gene3D G3DSA:1.10.40.30 375 431 4.6E-27 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Pfam PF00206 Lyase 6 301 4.6E-85 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PANTHER PTHR11444:SF3 3 456 4.4E-227 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Gene3D G3DSA:1.20.200.10 108 374 6.9E-102 T 22-04-2016 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PANTHER PTHR11444 3 456 4.4E-227 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.8E-21 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 9.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 9.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 9.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS01405 8b9e18f3a5d9b55fb6c258b15a920a56 456 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 9.7E-31 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 Gene3D G3DSA:3.40.605.10 4 261 4.7E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 1.5E-249 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 PANTHER PTHR11699:SF181 1 485 0.0 T 22-04-2016 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 PANTHER PTHR11699 1 485 0.0 T 22-04-2016 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 SUPERFAMILY SSF53720 2 483 1.57E-146 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 5.7E-140 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS07175 b6fe64a34dd00b46f2681ceb948853d8 497 Gene3D G3DSA:3.40.309.10 262 442 1.4E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Pfam PF00684 DnaJ central domain 145 205 6.8E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SUPERFAMILY SSF49493 257 342 3.66E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Pfam PF00226 DnaJ domain 5 67 1.1E-27 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.2E-140 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PRINTS PR00625 DnaJ domain signature 62 81 6.4E-32 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PRINTS PR00625 DnaJ domain signature 42 62 6.4E-32 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PRINTS PR00625 DnaJ domain signature 7 25 6.4E-32 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PRINTS PR00625 DnaJ domain signature 25 40 6.4E-32 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Pfam PF01556 DnaJ C terminal domain 119 331 2.8E-44 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.785 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Gene3D G3DSA:2.60.260.20 107 139 7.8E-22 T 22-04-2016 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Gene3D G3DSA:2.60.260.20 209 252 7.8E-22 T 22-04-2016 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SUPERFAMILY SSF46565 1 106 7.59E-36 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Gene3D G3DSA:1.10.287.110 1 101 1.2E-36 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PANTHER PTHR24078 1 356 3.1E-175 T 22-04-2016 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SMART SM00271 4 62 3.2E-31 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Gene3D G3DSA:2.60.260.20 254 331 5.5E-22 T 22-04-2016 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 Gene3D G3DSA:2.10.230.10 140 208 1.2E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SUPERFAMILY SSF57938 132 209 9.29E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SUPERFAMILY SSF49493 184 260 9.42E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 PANTHER PTHR24078:SF231 1 356 3.1E-175 T 22-04-2016 SAMA_RS13100 9c385c798991fc3cdaeef23c60885b75 376 SUPERFAMILY SSF49493 113 136 9.42E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Gene3D G3DSA:3.40.50.800 469 570 3.4E-31 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Pfam PF03129 Anticodon binding domain 475 567 1.7E-22 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 458 9.8E-51 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 SUPERFAMILY SSF52954 462 569 8.31E-32 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PANTHER PTHR11451:SF3 398 571 9.9E-160 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PANTHER PTHR11451:SF3 4 244 9.9E-160 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.162 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Gene3D G3DSA:3.90.960.10 255 387 7.8E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Gene3D G3DSA:3.30.930.10 391 467 1.7E-106 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Gene3D G3DSA:3.30.930.10 6 204 1.7E-106 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 4.7E-251 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 SUPERFAMILY SSF55681 10 237 1.95E-106 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 SUPERFAMILY SSF55681 406 477 1.95E-106 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PIRSF PIRSF001535 1 572 4.3E-272 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PANTHER PTHR11451 398 571 9.9E-160 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PANTHER PTHR11451 4 244 9.9E-160 T 22-04-2016 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 6.1E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS06080 48728971ce6fb9b079fc6e825b70aee5 572 SUPERFAMILY SSF55826 218 389 2.75E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 SUPERFAMILY SSF55821 7 202 1.86E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 Gene3D G3DSA:3.90.870.10 6 202 2.6E-69 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 201 1.2E-53 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 PIRSF PIRSF004930 1 315 1.3E-97 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 Pfam PF01300 Telomere recombination 14 190 7.5E-53 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 PANTHER PTHR17490 6 224 3.2E-82 T 22-04-2016 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 PANTHER PTHR17490:SF3 6 224 3.2E-82 T 22-04-2016 SAMA_RS15615 f07ca684ba6d0f78f561236debcf84d5 315 Pfam PF03481 Putative GTP-binding controlling metal-binding 192 312 1.5E-17 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SMART SM00448 1022 1136 2.1E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SUPERFAMILY SSF55785 616 734 6.49E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Pfam PF00072 Response regulator receiver domain 1024 1136 7.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SMART SM00388 781 847 5.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Gene3D G3DSA:3.30.450.20 619 735 5.6E-12 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 999 2.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 945 955 2.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 980 2.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 927 941 2.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Gene3D G3DSA:3.40.50.2300 1019 1140 6.6E-16 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Gene3D G3DSA:3.30.565.10 849 1002 3.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SUPERFAMILY SSF47384 765 847 7.65E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423:SF439 619 751 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423:SF439 37 62 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423:SF439 178 197 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423:SF439 777 1141 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SUPERFAMILY SSF52172 1021 1140 9.53E-16 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Gene3D G3DSA:1.10.287.130 774 843 6.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Pfam PF00512 His Kinase A (phospho-acceptor) domain 781 847 8.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423 619 751 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423 37 62 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423 178 197 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 PANTHER PTHR24423 777 1141 1.8E-219 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SUPERFAMILY SSF55874 837 1000 4.45E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Pfam PF12860 PAS fold 627 740 1.7E-45 T 22-04-2016 SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 892 1001 9.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10830 45548a3de64c3f0e49f630084d775633 1141 SMART SM00387 891 1002 2.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS13310 f2c1acf53182b05a1e14812d63ab0bfa 186 Pfam PF13505 Outer membrane protein beta-barrel domain 11 186 2.9E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SAMA_RS13310 f2c1acf53182b05a1e14812d63ab0bfa 186 SUPERFAMILY SSF56925 28 186 9.68E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS13310 f2c1acf53182b05a1e14812d63ab0bfa 186 Gene3D G3DSA:2.40.160.20 33 186 3.0E-15 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS17605 d43317adc50309123252ca9c18c58ca2 120 Gene3D G3DSA:3.10.129.10 9 108 2.1E-13 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17605 d43317adc50309123252ca9c18c58ca2 120 Pfam PF07977 FabA-like domain 19 91 4.0E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS17605 d43317adc50309123252ca9c18c58ca2 120 SUPERFAMILY SSF54637 2 114 1.12E-15 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17605 d43317adc50309123252ca9c18c58ca2 120 PIRSF PIRSF030962 1 119 5.3E-40 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 7.2E-28 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 7.2E-28 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 7.2E-28 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 PANTHER PTHR33162:SF4 1 120 8.6E-51 T 22-04-2016 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 2 125 17.066 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 4 81 3.6E-30 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 Pfam PF02416 mttA/Hcf106 family 5 53 4.1E-4 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SAMA_RS16700 3e0d7ae3973c58a3de66f74fe3657908 125 PANTHER PTHR33162 1 120 8.6E-51 T 22-04-2016 SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 1.3E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 PANTHER PTHR11260 2 204 3.9E-85 T 22-04-2016 SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 Gene3D G3DSA:3.40.30.10 1 79 1.3E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 193 2.0E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 Gene3D G3DSA:1.20.1050.10 80 197 2.1E-49 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 SUPERFAMILY SSF52833 1 81 1.74E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 PANTHER PTHR11260:SF178 2 204 3.9E-85 T 22-04-2016 SAMA_RS05695 3a664cc08cfa1f596168a3e0ed798a00 222 SUPERFAMILY SSF47616 74 204 7.23E-39 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS12290 0db31c0f228c22a99bc18c84288dbe1d 518 PANTHER PTHR30365:SF0 378 515 2.2E-266 T 22-04-2016 SAMA_RS12290 0db31c0f228c22a99bc18c84288dbe1d 518 PANTHER PTHR30365:SF0 1 312 2.2E-266 T 22-04-2016 SAMA_RS12290 0db31c0f228c22a99bc18c84288dbe1d 518 PANTHER PTHR30365 378 515 2.2E-266 T 22-04-2016 SAMA_RS12290 0db31c0f228c22a99bc18c84288dbe1d 518 PANTHER PTHR30365 1 312 2.2E-266 T 22-04-2016 SAMA_RS12290 0db31c0f228c22a99bc18c84288dbe1d 518 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 2.6E-176 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 SUPERFAMILY SSF50249 3 123 4.28E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 Gene3D G3DSA:2.40.50.140 1 123 1.0E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 Pfam PF00164 Ribosomal protein S12/S23 8 123 1.6E-42 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PIRSF PIRSF002133 1 124 2.0E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.528 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PANTHER PTHR11652 1 116 2.9E-71 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.6E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01100 afbfb9b057d97b7a47990c0cc652026d 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 9.8E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 SUPERFAMILY SSF63411 37 250 1.3E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 Gene3D G3DSA:3.30.830.10 40 250 3.7E-39 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 PANTHER PTHR11851 7 453 1.7E-92 T 22-04-2016 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 SUPERFAMILY SSF63411 261 469 8.77E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 PANTHER PTHR11851:SF144 7 453 1.7E-92 T 22-04-2016 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 Gene3D G3DSA:3.30.830.10 266 447 3.1E-27 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 Pfam PF05193 Peptidase M16 inactive domain 202 379 3.5E-30 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS17910 0ca890bcd4525225471b5c3450e44586 473 Pfam PF00675 Insulinase (Peptidase family M16) 58 157 6.5E-8 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS03265 579ee8c093a44c682b222355d10ba40b 160 PANTHER PTHR30221 4 159 1.1E-54 T 22-04-2016 SAMA_RS03265 579ee8c093a44c682b222355d10ba40b 160 Pfam PF00924 Mechanosensitive ion channel 53 156 5.5E-15 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS03265 579ee8c093a44c682b222355d10ba40b 160 SUPERFAMILY SSF50182 91 157 6.87E-13 T 22-04-2016 IPR010920 LSM domain SAMA_RS03265 579ee8c093a44c682b222355d10ba40b 160 Gene3D G3DSA:2.30.30.60 106 157 1.2E-11 T 22-04-2016 SAMA_RS03265 579ee8c093a44c682b222355d10ba40b 160 PANTHER PTHR30221:SF8 4 159 1.1E-54 T 22-04-2016 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF56059 1024 1273 3.71E-55 T 22-04-2016 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:3.40.50.20 940 1070 3.0E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:3.90.226.10 665 832 4.1E-14 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Pfam PF00289 Biotin carboxylase, N-terminal domain 940 1051 1.5E-31 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:2.40.50.100 1422 1512 1.2E-16 T 22-04-2016 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:3.90.226.10 118 269 3.4E-21 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Pfam PF01039 Carboxyl transferase domain 120 212 5.7E-10 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:3.30.1490.20 1071 1143 9.2E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF52096 23 301 1.95E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF52440 908 1054 2.97E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SMART SM00878 1276 1388 4.2E-31 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF51230 1426 1512 1.69E-6 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF51246 1272 1391 5.02E-26 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 SUPERFAMILY SSF52096 620 871 4.73E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Gene3D G3DSA:3.30.470.20 1145 1391 9.7E-70 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Pfam PF02785 Biotin carboxylase C-terminal domain 1276 1388 3.4E-25 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 1057 1264 7.6E-61 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 1228 1235 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 PANTHER PTHR18866 938 1416 2.8E-184 T 22-04-2016 SAMA_RS03085 e28f3c1cb4233c059361365410ba5b9f 1517 PANTHER PTHR18866 1432 1517 2.8E-184 T 22-04-2016 SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 SMART SM00487 20 229 6.9E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 Gene3D G3DSA:3.40.50.300 1 212 1.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 SMART SM00490 258 339 2.9E-32 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 PANTHER PTHR24031:SF0 1 370 3.2E-164 T 22-04-2016 SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 Gene3D G3DSA:3.40.50.300 213 372 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 SUPERFAMILY SSF52540 75 359 2.44E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.2E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 Pfam PF00271 Helicase conserved C-terminal domain 232 339 8.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 PANTHER PTHR24031 1 370 3.2E-164 T 22-04-2016 SAMA_RS04235 f4e5d0ba272afac0478b4a5653ac5f5c 432 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 PANTHER PTHR34218:SF2 1 754 1.9E-120 T 22-04-2016 SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 Gene3D G3DSA:1.10.439.10 27 185 1.5E-43 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 SUPERFAMILY SSF56235 38 767 6.95E-177 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 PIRSF PIRSF001227 3 762 2.4E-130 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 PANTHER PTHR34218 1 754 1.9E-120 T 22-04-2016 SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 Gene3D G3DSA:3.60.20.10 251 338 7.5E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 Gene3D G3DSA:3.60.20.10 394 595 7.5E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS18400 339deead838d2508f949bb0be3b009e5 768 Pfam PF01804 Penicillin amidase 43 754 1.1E-126 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 Gene3D G3DSA:3.40.50.150 154 364 5.8E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 1.3E-173 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 PANTHER PTHR11061 10 365 3.7E-200 T 22-04-2016 SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 PANTHER PTHR11061:SF25 10 365 3.7E-200 T 22-04-2016 SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 SUPERFAMILY SSF53335 10 364 7.07E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 1.5E-174 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SAMA_RS00975 0623cea75e8ff99958563e132ab412f7 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 365 43.848 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 SUPERFAMILY SSF51219 8 246 8.11E-83 T 22-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 9 227 1.2E-35 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 PANTHER PTHR31801:SF3 3 264 1.8E-107 T 22-04-2016 SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 PANTHER PTHR31801 3 264 1.8E-107 T 22-04-2016 SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 Gene3D G3DSA:3.60.160.10 5 250 1.2E-103 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SAMA_RS08190 8d0d2c6ed0e052201af1a37c10ba861f 264 Pfam PF01987 Mitochondrial biogenesis AIM24 10 226 1.9E-66 T 22-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 Gene3D G3DSA:3.20.20.70 4 335 3.4E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PIRSF PIRSF001415 2 335 3.5E-150 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 331 3.3E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 SUPERFAMILY SSF51569 5 334 4.98E-146 T 22-04-2016 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 128 142 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 SMART SM01004 8 332 1.9E-248 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16725 c7b5e6370d1b98c70078f03dfa9591d5 336 PANTHER PTHR11458 3 336 3.1E-192 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 23 253 2.3E-60 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 PANTHER PTHR30616 1 254 7.2E-117 T 22-04-2016 SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 PANTHER PTHR30616:SF3 1 254 7.2E-117 T 22-04-2016 SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 Gene3D G3DSA:3.60.140.10 2 253 1.2E-91 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 252 1.5E-71 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SAMA_RS13630 de49864fa30936e6696aa1558df8865d 254 SUPERFAMILY SSF64438 2 253 1.01E-81 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 SUPERFAMILY SSF53383 1 395 2.77E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 Gene3D G3DSA:3.40.640.10 46 315 1.4E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.5E-33 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.5E-33 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.5E-33 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.5E-33 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.3E-76 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PANTHER PTHR11879 1 395 1.8E-183 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 PANTHER PTHR11879:SF11 1 395 1.8E-183 T 22-04-2016 SAMA_RS09035 c25df4d6bdd996c25871c3d7a379d0e7 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 PANTHER PTHR16254 5 535 6.6E-150 T 22-04-2016 SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 PANTHER PTHR16254:SF14 5 535 6.6E-150 T 22-04-2016 SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 Pfam PF02254 TrkA-N domain 390 506 4.0E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 Pfam PF00999 Sodium/hydrogen exchanger family 5 351 2.2E-40 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 SUPERFAMILY SSF51735 389 519 5.67E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02865 183d46f53100ad128f3ef1ead6f2ba67 535 Gene3D G3DSA:3.40.50.720 382 525 7.0E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 SMART SM00052 420 662 1.8E-105 T 22-04-2016 IPR001633 EAL domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 Pfam PF00672 HAMP domain 169 234 2.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 406 3.4E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 Gene3D G3DSA:3.30.70.270 251 418 3.7E-56 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 SMART SM00267 237 410 6.1E-62 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 SUPERFAMILY SSF55073 254 412 1.61E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 SUPERFAMILY SSF141868 426 670 4.05E-85 T 22-04-2016 IPR001633 EAL domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 408 1.0E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 Pfam PF00563 EAL domain 426 657 3.0E-69 T 22-04-2016 IPR001633 EAL domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799:SF774 282 499 6.6E-79 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799:SF774 657 676 6.6E-79 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799:SF774 1 87 6.6E-79 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 Gene3D G3DSA:3.20.20.450 424 669 1.7E-92 T 22-04-2016 IPR001633 EAL domain SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799 282 499 6.6E-79 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799 657 676 6.6E-79 T 22-04-2016 SAMA_RS05050 aa2519d9ada78bed7866c9b5950eb3e8 680 PANTHER PTHR10799 1 87 6.6E-79 T 22-04-2016 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 157 1.4E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 PANTHER PTHR32125 1 160 3.3E-60 T 22-04-2016 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 Gene3D G3DSA:3.30.1330.50 1 158 7.3E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 SUPERFAMILY SSF69765 1 158 4.71E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 36.22 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS05415 ba84e81145f02b58c3b868bfab71bbcf 160 Pfam PF02542 YgbB family 3 157 2.3E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS14965 865b8474f22a86d6bd4117da72f44c83 127 Pfam PF01124 MAPEG family 3 126 7.5E-21 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein SAMA_RS14965 865b8474f22a86d6bd4117da72f44c83 127 PANTHER PTHR35371 1 127 6.9E-27 T 22-04-2016 SAMA_RS14965 865b8474f22a86d6bd4117da72f44c83 127 Gene3D G3DSA:1.20.120.550 3 126 4.5E-16 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain SAMA_RS14965 865b8474f22a86d6bd4117da72f44c83 127 SUPERFAMILY SSF161084 2 124 1.44E-25 T 22-04-2016 SAMA_RS14980 fc493e917276936526918ec1b246edcf 275 PANTHER PTHR30535 25 270 2.7E-58 T 22-04-2016 SAMA_RS14980 fc493e917276936526918ec1b246edcf 275 Gene3D G3DSA:3.40.50.1980 146 271 1.8E-38 T 22-04-2016 SAMA_RS14980 fc493e917276936526918ec1b246edcf 275 SUPERFAMILY SSF53807 25 270 1.41E-63 T 22-04-2016 SAMA_RS14980 fc493e917276936526918ec1b246edcf 275 Pfam PF01497 Periplasmic binding protein 28 250 1.3E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SAMA_RS14980 fc493e917276936526918ec1b246edcf 275 Gene3D G3DSA:3.40.50.1980 25 143 1.4E-31 T 22-04-2016 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PANTHER PTHR30523:SF3 1 887 0.0 T 22-04-2016 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PANTHER PTHR30523 1 887 0.0 T 22-04-2016 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 SUPERFAMILY SSF51621 14 887 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 143 154 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 Pfam PF00311 Phosphoenolpyruvate carboxylase 138 887 2.1E-288 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 254 269 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 195 211 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 394 414 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 717 743 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 585 614 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 543 563 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 142 155 1.6E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 887 18.74 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 Gene3D G3DSA:1.20.1440.90 283 397 1.9E-28 T 22-04-2016 SAMA_RS01375 8b18d7794fc2f30b785873fc72f0aa55 887 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 545 557 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 Pfam PF01494 FAD binding domain 7 348 2.4E-32 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 392 1.4E-126 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 2.5E-21 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.5E-21 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 2.5E-21 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-21 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PANTHER PTHR13789:SF5 5 392 1.3E-151 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 SUPERFAMILY SSF51905 278 392 7.92E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 SUPERFAMILY SSF51905 5 178 7.92E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 PANTHER PTHR13789 5 392 1.3E-151 T 22-04-2016 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 Gene3D G3DSA:3.50.50.60 6 183 9.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14245 ca7a4c37ea480e93ba251d4936d7d5f5 393 Gene3D G3DSA:3.50.50.60 270 358 9.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07650 6287099f5a48adc9d0883380117ba166 394 Pfam PF13437 HlyD family secretion protein 212 305 1.1E-10 T 22-04-2016 SAMA_RS07650 6287099f5a48adc9d0883380117ba166 394 PANTHER PTHR32347 28 393 1.3E-30 T 22-04-2016 SAMA_RS07650 6287099f5a48adc9d0883380117ba166 394 Gene3D G3DSA:2.40.50.100 70 89 2.4E-4 T 22-04-2016 SAMA_RS07650 6287099f5a48adc9d0883380117ba166 394 Gene3D G3DSA:2.40.50.100 209 238 2.4E-4 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 5 468 5.2E-244 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Gene3D G3DSA:3.50.50.60 236 397 5.5E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 SUPERFAMILY SSF51971 146 398 1.65E-69 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 3.5E-35 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 3.5E-35 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 3.5E-35 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 3.5E-35 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 3.5E-35 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Gene3D G3DSA:3.40.50.720 150 235 2.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Gene3D G3DSA:3.40.50.720 398 470 2.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 133 2.6E-37 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Gene3D G3DSA:1.10.1060.10 6 149 2.2E-44 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 SUPERFAMILY SSF46548 6 156 2.14E-37 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 456 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PANTHER PTHR11938 26 468 3.4E-281 T 22-04-2016 SAMA_RS04480 90edafbf432e7a033a666859f17e89cd 472 PANTHER PTHR11938:SF93 26 468 3.4E-281 T 22-04-2016 SAMA_RS17700 f2127843a81fc4c906519965e00e2ede 147 Gene3D G3DSA:3.10.129.10 4 146 3.7E-55 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17700 f2127843a81fc4c906519965e00e2ede 147 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 9 145 6.8E-53 T 22-04-2016 IPR012660 Thioesterase, putative SAMA_RS17700 f2127843a81fc4c906519965e00e2ede 147 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 14 146 3.6E-44 T 22-04-2016 IPR012660 Thioesterase, putative SAMA_RS17700 f2127843a81fc4c906519965e00e2ede 147 SUPERFAMILY SSF54637 6 145 1.1E-42 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 Gene3D G3DSA:3.10.310.10 3 193 1.5E-88 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 SUPERFAMILY SSF54506 3 181 1.18E-68 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 Gene3D G3DSA:3.10.310.10 194 377 8.1E-78 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 PANTHER PTHR30349 1 379 1.2E-132 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 Pfam PF04303 PrpF protein 5 394 2.3E-171 T 22-04-2016 IPR007400 PrpF protein SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 SUPERFAMILY SSF54506 188 395 6.59E-73 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 PANTHER PTHR30349:SF21 1 379 1.2E-132 T 22-04-2016 SAMA_RS17180 04eb3f8e0de6bae6d7a491101978c52d 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 395 5.8E-223 T 22-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 SUPERFAMILY SSF52743 131 557 8.91E-105 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 SUPERFAMILY SSF49785 691 802 1.49E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 SUPERFAMILY SSF89260 597 667 6.54E-5 T 22-04-2016 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:2.60.120.260 694 802 4.8E-14 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 495 511 1.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 191 204 1.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 170 1.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 496 506 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PANTHER PTHR10795:SF419 494 566 1.4E-74 T 22-04-2016 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PANTHER PTHR10795:SF419 1 347 1.4E-74 T 22-04-2016 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF05922 Peptidase inhibitor I9 44 129 3.1E-7 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:3.30.70.80 38 120 3.7E-16 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF00082 Subtilase family 155 381 3.5E-25 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF00082 Subtilase family 480 546 3.4E-13 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 SUPERFAMILY SSF54897 42 128 1.81E-8 T 22-04-2016 IPR009020 Proteinase inhibitor, propeptide SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF01483 Proprotein convertase P-domain 723 802 2.9E-21 T 22-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF02225 PA domain 383 473 2.1E-6 T 22-04-2016 IPR003137 PA domain SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 195 205 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 597 662 1.5E-14 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:3.50.30.30 347 482 2.2E-44 T 22-04-2016 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:3.40.50.200 121 346 1.0E-82 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:3.40.50.200 483 555 1.0E-82 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PANTHER PTHR10795 494 566 1.4E-74 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 PANTHER PTHR10795 1 347 1.4E-74 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11410 2fcd24d2e25483ac31375622d46aa0f1 803 Gene3D G3DSA:2.60.120.380 605 668 7.2E-4 T 22-04-2016 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 Gene3D G3DSA:1.10.10.10 2 81 5.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 SUPERFAMILY SSF46785 3 112 3.91E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 PANTHER PTHR30126 3 304 2.1E-96 T 22-04-2016 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 Pfam PF03466 LysR substrate binding domain 90 288 6.7E-41 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 Gene3D G3DSA:3.40.190.10 91 176 3.6E-16 T 22-04-2016 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 Gene3D G3DSA:3.40.190.10 177 259 9.8E-13 T 22-04-2016 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 SUPERFAMILY SSF53850 90 296 1.29E-37 T 22-04-2016 SAMA_RS07810 db499a88b5997640c46b43c439c81d14 304 PANTHER PTHR30126:SF11 3 304 2.1E-96 T 22-04-2016 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 Gene3D G3DSA:3.30.465.10 343 427 1.1E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 SMART SM01091 348 428 5.4E-25 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 Pfam PF00571 CBS domain 290 335 4.1E-4 T 22-04-2016 IPR000644 CBS domain SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 Pfam PF01595 Domain of unknown function DUF21 8 199 2.5E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 PANTHER PTHR22777:SF16 1 428 7.4E-281 T 22-04-2016 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 SUPERFAMILY SSF56176 346 431 1.2E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 Pfam PF03471 Transporter associated domain 350 427 1.0E-18 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 Gene3D G3DSA:3.10.580.10 200 341 2.3E-9 T 22-04-2016 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 SUPERFAMILY SSF54631 201 336 3.11E-18 T 22-04-2016 SAMA_RS17110 f79979248c46655447cbea220a8f6cdd 436 PANTHER PTHR22777 1 428 7.4E-281 T 22-04-2016 SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 1.9E-162 T 22-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 Gene3D G3DSA:3.90.1150.10 277 378 4.8E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 PANTHER PTHR30244:SF16 11 376 8.9E-117 T 22-04-2016 SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 PIRSF PIRSF000390 15 382 5.5E-88 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 PANTHER PTHR30244 11 376 8.9E-117 T 22-04-2016 SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 4.5E-82 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 SUPERFAMILY SSF53383 19 378 5.83E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS12190 ac1da1701e88939865e71daea3cf6605 385 Gene3D G3DSA:3.40.640.10 20 275 8.2E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 2.0E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 2.0E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PRINTS PR00046 Major sigma-70 factor signature 80 93 2.0E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PRINTS PR00046 Major sigma-70 factor signature 234 246 2.0E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 SUPERFAMILY SSF88946 15 125 7.85E-41 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Pfam PF04545 Sigma-70, region 4 230 280 3.4E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 18 284 1.7E-129 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 SUPERFAMILY SSF88659 199 284 6.54E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PIRSF PIRSF000770 6 285 2.9E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Gene3D G3DSA:1.10.10.10 226 283 3.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 282 5.1E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Gene3D G3DSA:1.10.601.10 17 125 1.9E-36 T 22-04-2016 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Pfam PF04542 Sigma-70 region 2 56 125 3.8E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.446 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 PANTHER PTHR30376 5 284 4.5E-123 T 22-04-2016 SAMA_RS18020 e7c083a13c2ae7bc10981b7e9ef74f82 285 Pfam PF00140 Sigma-70 factor, region 1.2 18 47 9.3E-6 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 PANTHER PTHR26402 2 221 4.9E-68 T 22-04-2016 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 Gene3D G3DSA:3.40.50.2300 3 146 2.0E-39 T 22-04-2016 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 SMART SM00448 2 110 1.1E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 Gene3D G3DSA:1.10.10.10 147 222 1.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 PANTHER PTHR26402:SF483 2 221 4.9E-68 T 22-04-2016 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 SUPERFAMILY SSF52172 3 121 1.41E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 Pfam PF00072 Response regulator receiver domain 4 110 7.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 SUPERFAMILY SSF46894 131 221 4.54E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 SMART SM00862 145 221 5.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS08960 f4e2155baee84c704fa848cf7d5a78a9 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.7E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 PIRSF PIRSF000390 14 395 3.2E-89 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 PANTHER PTHR30244 349 395 5.9E-144 T 22-04-2016 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 PANTHER PTHR30244 40 332 5.9E-144 T 22-04-2016 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 Gene3D G3DSA:3.90.1150.10 250 390 1.6E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 Gene3D G3DSA:3.40.640.10 8 249 5.7E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 387 3.3E-90 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 PANTHER PTHR30244:SF13 349 395 5.9E-144 T 22-04-2016 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 PANTHER PTHR30244:SF13 40 332 5.9E-144 T 22-04-2016 SAMA_RS08575 ce413ed161325431890d9e57e66c3e3a 395 SUPERFAMILY SSF53383 2 393 2.24E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 3.4E-198 T 22-04-2016 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 Pfam PF04055 Radical SAM superfamily 151 325 3.5E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 PANTHER PTHR11918 1 474 3.4E-226 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 Pfam PF01938 TRAM domain 378 439 8.4E-16 T 22-04-2016 IPR002792 TRAM domain SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.122 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 Gene3D G3DSA:3.80.30.20 146 379 2.3E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 SUPERFAMILY SSF102114 129 374 2.22E-61 T 22-04-2016 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.3E-154 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 SMART SM00729 147 367 1.2E-60 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS13455 d262d15498d0eb0042f6d7d2b56bb198 474 PANTHER PTHR11918:SF43 1 474 3.4E-226 T 22-04-2016 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 PANTHER PTHR11695 15 343 1.6E-157 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 SUPERFAMILY SSF50129 11 171 1.27E-48 T 22-04-2016 IPR011032 GroES-like SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 SUPERFAMILY SSF51735 148 310 4.2E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 Pfam PF00107 Zinc-binding dehydrogenase 185 307 3.7E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 SMART SM00829 10 341 9.3E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 PANTHER PTHR11695:SF608 15 343 1.6E-157 T 22-04-2016 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 143 5.6E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 Gene3D G3DSA:3.40.50.720 178 289 1.2E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14180 a719dabf9362263b494bb43ef7379629 348 Gene3D G3DSA:3.90.180.10 5 177 4.0E-63 T 22-04-2016 IPR011032 GroES-like SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 3.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 Pfam PF00771 FHIPEP family 31 689 8.1E-267 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PIRSF PIRSF005419 5 699 2.6E-244 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SAMA_RS11955 415167bf826950da83687accbd86814b 699 PANTHER PTHR30161 1 699 0.0 T 22-04-2016 SAMA_RS11955 415167bf826950da83687accbd86814b 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 146 169 - T 22-04-2016 IPR025505 FHIPEP conserved site SAMA_RS11955 415167bf826950da83687accbd86814b 699 PANTHER PTHR30161:SF1 1 699 0.0 T 22-04-2016 SAMA_RS11955 415167bf826950da83687accbd86814b 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 25 697 1.6E-261 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 SUPERFAMILY SSF52540 5 290 8.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-61 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 Gene3D G3DSA:3.40.50.300 19 182 4.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 PANTHER PTHR11603 4 318 2.7E-145 T 22-04-2016 SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 Gene3D G3DSA:1.10.8.300 201 315 4.5E-41 T 22-04-2016 SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 PANTHER PTHR11603:SF148 4 318 2.7E-145 T 22-04-2016 SAMA_RS11330 a4ff87b2e90fe4fc8d2f728b2154949c 318 PIRSF PIRSF002849 2 318 2.2E-123 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Pfam PF00271 Helicase conserved C-terminal domain 283 400 1.7E-10 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 SMART SM00487 72 256 3.7E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Gene3D G3DSA:3.40.50.300 275 412 2.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 11 1288 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 PANTHER PTHR18934 73 727 0.0 T 22-04-2016 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 PANTHER PTHR18934 765 860 0.0 T 22-04-2016 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Pfam PF04408 Helicase associated domain (HA2) 464 551 7.8E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Pfam PF11898 Domain of unknown function (DUF3418) 706 1288 3.2E-216 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 SMART SM00382 89 380 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 SMART SM00847 460 553 6.1E-31 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Gene3D G3DSA:3.40.50.300 74 231 2.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 PANTHER PTHR18934:SF109 73 727 0.0 T 22-04-2016 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 PANTHER PTHR18934:SF109 765 860 0.0 T 22-04-2016 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 SMART SM00490 300 400 1.5E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 596 691 3.0E-19 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 SUPERFAMILY SSF52540 71 593 5.82E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08460 21d5741760be317ed5ce0893f8bf4868 1289 Pfam PF00270 DEAD/DEAH box helicase 84 230 7.8E-7 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 SUPERFAMILY SSF51735 92 258 6.15E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Gene3D G3DSA:3.40.50.720 118 149 4.3E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 SUPERFAMILY SSF52283 32 113 7.02E-23 T 22-04-2016 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 257 4.8E-28 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.257 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Gene3D G3DSA:3.40.50.720 1 117 8.8E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Gene3D G3DSA:3.40.50.720 150 282 3.8E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 278 6.3E-20 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 3.6E-24 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 PANTHER PTHR10996 1 331 4.0E-133 T 22-04-2016 SAMA_RS11250 078bd3d5b556fc06b7989bbcef60ade6 375 PANTHER PTHR10996:SF111 1 331 4.0E-133 T 22-04-2016 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 PANTHER PTHR23083 226 399 5.4E-12 T 22-04-2016 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 Gene3D G3DSA:1.25.40.10 211 397 3.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 Pfam PF14559 Tetratricopeptide repeat 258 312 7.3E-7 T 22-04-2016 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 Pfam PF13432 Tetratricopeptide repeat 320 378 3.6E-4 T 22-04-2016 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 SUPERFAMILY SSF48452 208 375 5.56E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 SMART SM00028 246 279 5.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 SMART SM00028 348 381 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS02450 e423f7539e2aa0e1f66a91a323ad7e15 399 SMART SM00028 212 245 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS10815 6c988ce553078a4ce357cedaaca43d07 141 Pfam PF03061 Thioesterase superfamily 37 110 1.1E-16 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS10815 6c988ce553078a4ce357cedaaca43d07 141 SUPERFAMILY SSF54637 17 137 4.35E-36 T 22-04-2016 IPR029069 HotDog domain SAMA_RS10815 6c988ce553078a4ce357cedaaca43d07 141 PANTHER PTHR11049:SF8 8 137 5.8E-76 T 22-04-2016 SAMA_RS10815 6c988ce553078a4ce357cedaaca43d07 141 Gene3D G3DSA:3.10.129.10 13 135 1.8E-43 T 22-04-2016 IPR029069 HotDog domain SAMA_RS10815 6c988ce553078a4ce357cedaaca43d07 141 PANTHER PTHR11049 8 137 5.8E-76 T 22-04-2016 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 PANTHER PTHR21599 1 378 1.5E-204 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 SUPERFAMILY SSF110738 1 382 5.23E-140 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 Pfam PF02595 Glycerate kinase family 3 379 4.4E-146 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 380 2.3E-155 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 PANTHER PTHR21599:SF4 1 378 1.5E-204 T 22-04-2016 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 Gene3D G3DSA:3.90.1510.10 42 282 2.1E-93 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SAMA_RS16810 432f597f92597e5c865b0fb066d5fafe 384 PIRSF PIRSF006078 1 384 2.6E-134 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Gene3D G3DSA:3.30.70.270 643 734 1.6E-6 T 22-04-2016 SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SUPERFAMILY SSF55785 459 570 2.28E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SMART SM00091 346 416 9.8 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SMART SM00091 468 532 3.3 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SUPERFAMILY SSF103190 244 306 2.43E-6 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Gene3D G3DSA:3.30.450.20 463 546 4.7E-6 T 22-04-2016 SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SUPERFAMILY SSF103190 57 213 1.18E-16 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SUPERFAMILY SSF55785 337 459 5.52E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Pfam PF00990 Diguanylate cyclase, GGDEF domain 644 731 8.5E-5 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Gene3D G3DSA:3.30.450.20 362 459 4.1E-8 T 22-04-2016 SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Pfam PF13426 PAS domain 365 460 0.0015 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Pfam PF13426 PAS domain 480 572 0.011 T 22-04-2016 IPR000014 PAS domain SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 Gene3D G3DSA:3.30.450.20 251 312 1.8E-6 T 22-04-2016 SAMA_RS14365 72683cd0f658c384f0bbce3a1544c625 739 SUPERFAMILY SSF55073 609 734 1.18E-7 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 Pfam PF00571 CBS domain 362 409 1.8E-4 T 22-04-2016 IPR000644 CBS domain SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 SUPERFAMILY SSF54631 363 465 3.66E-13 T 22-04-2016 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 Gene3D G3DSA:1.20.1080.10 18 263 2.1E-74 T 22-04-2016 IPR023271 Aquaporin-like SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 Pfam PF01226 Formate/nitrite transporter 4 258 3.7E-65 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 9 259 7.6E-92 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 PANTHER PTHR30520:SF4 230 258 3.7E-86 T 22-04-2016 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 PANTHER PTHR30520:SF4 11 214 3.7E-86 T 22-04-2016 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 Gene3D G3DSA:3.10.580.10 363 462 4.1E-11 T 22-04-2016 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 PANTHER PTHR30520 230 258 3.7E-86 T 22-04-2016 SAMA_RS07805 40416932a5c162d04573d78c368ca827 516 PANTHER PTHR30520 11 214 3.7E-86 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 PANTHER PTHR10617:SF113 13 412 3.8E-148 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 Pfam PF01494 FAD binding domain 13 334 4.2E-17 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 308 6.1E-8 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 324 6.1E-8 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 6.1E-8 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 Gene3D G3DSA:3.50.50.60 285 328 2.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 Gene3D G3DSA:3.50.50.60 10 186 2.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 PANTHER PTHR10617 13 412 3.8E-148 T 22-04-2016 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 SUPERFAMILY SSF51905 289 394 7.78E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS17635 2557107d5a70d23e91e6a1a52045ee35 424 SUPERFAMILY SSF51905 12 181 7.78E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993:SF11 354 554 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993:SF11 1 117 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993:SF11 188 252 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 SUPERFAMILY SSF56762 1 548 5.49E-170 T 22-04-2016 IPR029014 NiFe hydrogenase-like SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 Pfam PF00374 Nickel-dependent hydrogenase 40 548 1.5E-205 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993 354 554 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993 1 117 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 PANTHER PTHR11993 188 252 5.1E-207 T 22-04-2016 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 539 548 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SAMA_RS08760 8130521f89e90d0257cf432a9f2e4945 567 Gene3D G3DSA:1.10.645.10 1 548 5.0E-204 T 22-04-2016 IPR029014 NiFe hydrogenase-like SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 Gene3D G3DSA:3.40.720.10 1 113 3.7E-75 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 Gene3D G3DSA:3.40.720.10 237 405 3.7E-75 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 SUPERFAMILY SSF143856 118 233 2.88E-49 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 402 4.0E-171 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 Pfam PF01676 Metalloenzyme superfamily 2 395 1.3E-38 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 PANTHER PTHR21110 2 407 7.4E-159 T 22-04-2016 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 Gene3D G3DSA:3.30.70.1250 114 233 3.5E-52 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 PIRSF PIRSF001491 1 406 4.7E-163 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 SUPERFAMILY SSF53649 1 114 1.96E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 SUPERFAMILY SSF53649 234 405 1.96E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 404 55.154 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SAMA_RS05095 0b461cee1db3b2b2ea8249f49dc15c1a 407 PANTHER PTHR21110:SF0 2 407 7.4E-159 T 22-04-2016 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 SUPERFAMILY SSF56784 3 213 1.16E-49 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PANTHER PTHR18901:SF24 3 210 9.7E-73 T 22-04-2016 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 Gene3D G3DSA:1.10.150.240 16 76 1.2E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 Gene3D G3DSA:3.40.50.1000 3 15 2.9E-34 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 Gene3D G3DSA:3.40.50.1000 87 211 2.9E-34 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 181 2.6E-32 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 1.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 185 1.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 4 200 1.1E-51 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 177 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS09015 f4def3fde45316a50ddf59816df60aff 213 PANTHER PTHR18901 3 210 9.7E-73 T 22-04-2016 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 303 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 333 30.708 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 SUPERFAMILY SSF52440 3 118 6.43E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 PANTHER PTHR23132 1 334 1.9E-112 T 22-04-2016 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 86 97 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Gene3D G3DSA:3.30.1490.20 129 200 5.7E-12 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 6.4E-83 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Pfam PF01820 D-ala D-ala ligase N-terminus 6 109 3.6E-15 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Gene3D G3DSA:3.40.50.20 1 108 8.3E-16 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Gene3D G3DSA:3.30.470.20 109 126 4.6E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Gene3D G3DSA:3.30.470.20 201 329 4.6E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 PANTHER PTHR23132:SF8 1 334 1.9E-112 T 22-04-2016 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 SUPERFAMILY SSF56059 119 334 5.4E-43 T 22-04-2016 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 PIRSF PIRSF039102 1 336 4.6E-69 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS09960 b44bfaa5941693a40d8368d9f53c4866 336 Pfam PF07478 D-ala D-ala ligase C-terminus 128 328 1.0E-48 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 Gene3D G3DSA:3.40.50.720 195 314 1.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 PANTHER PTHR11695:SF560 133 376 8.4E-217 T 22-04-2016 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 PANTHER PTHR11695:SF560 20 113 8.4E-217 T 22-04-2016 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 SUPERFAMILY SSF50129 4 191 2.06E-72 T 22-04-2016 IPR011032 GroES-like SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 1.8E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 SUPERFAMILY SSF51735 165 338 1.81E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 PANTHER PTHR11695 133 376 8.4E-217 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 PANTHER PTHR11695 20 113 8.4E-217 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 SUPERFAMILY SSF50129 323 374 2.4E-11 T 22-04-2016 IPR011032 GroES-like SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 SMART SM00829 17 372 0.0035 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 Gene3D G3DSA:3.90.180.10 6 194 6.1E-67 T 22-04-2016 IPR011032 GroES-like SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 1.0E-227 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 SAMA_RS00020 082604b671ceedc8403250ba309ccc53 377 Pfam PF00107 Zinc-binding dehydrogenase 202 325 4.0E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 Gene3D G3DSA:3.40.50.720 1 159 2.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 SUPERFAMILY SSF51735 4 159 2.63E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 1.1E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 98 3.3E-19 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 SUPERFAMILY SSF48179 161 269 1.36E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 267 1.3E-35 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 PIRSF PIRSF000193 3 270 1.4E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 25.534 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 PANTHER PTHR11645 1 271 2.9E-109 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 PANTHER PTHR11645:SF0 1 271 2.9E-109 T 22-04-2016 SAMA_RS12935 1ba5b205b1143791ecacc6a7d151ab36 271 Gene3D G3DSA:1.10.3730.10 161 267 1.1E-35 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 1.6E-119 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 Pfam PF00793 DAHP synthetase I family 9 273 3.2E-71 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 PANTHER PTHR21057:SF6 1 282 1.4E-215 T 22-04-2016 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 SUPERFAMILY SSF51569 5 277 2.66E-105 T 22-04-2016 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 PANTHER PTHR21057 1 282 1.4E-215 T 22-04-2016 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 49.405 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS13355 dda8e4136166615619f93064c72a6239 282 Gene3D G3DSA:3.20.20.70 16 279 3.4E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 PANTHER PTHR38101 1 177 2.8E-58 T 22-04-2016 SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 Pfam PF04751 Protein of unknown function (DUF615) 20 176 1.6E-48 T 22-04-2016 IPR006839 Ribosome-associated, YjgA SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 SUPERFAMILY SSF158710 31 178 5.1E-45 T 22-04-2016 SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 Gene3D G3DSA:1.10.60.30 31 105 2.8E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 Gene3D G3DSA:1.10.60.30 108 179 5.4E-20 T 22-04-2016 IPR023153 PSPTO4464-like domain SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 PANTHER PTHR38101:SF1 1 177 2.8E-58 T 22-04-2016 SAMA_RS02580 830e54141693e21403aa0d07693681a8 182 PIRSF PIRSF016183 5 182 1.5E-56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SUPERFAMILY SSF49785 547 666 1.15E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795:SF419 13 175 3.1E-73 T 22-04-2016 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795:SF419 560 652 3.1E-73 T 22-04-2016 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795:SF419 201 453 3.1E-73 T 22-04-2016 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Pfam PF01483 Proprotein convertase P-domain 797 877 3.7E-15 T 22-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Pfam PF01483 Proprotein convertase P-domain 582 660 3.9E-20 T 22-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SMART SM00089 987 1065 2.2E-20 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SMART SM00089 893 980 1.0 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SMART SM00089 675 762 3.5 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Gene3D G3DSA:2.60.40.670 985 1064 2.7E-21 T 22-04-2016 IPR000601 PKD domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PRINTS PR00723 Subtilisin serine protease family (S8) signature 213 226 1.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PRINTS PR00723 Subtilisin serine protease family (S8) signature 378 394 1.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PRINTS PR00723 Subtilisin serine protease family (S8) signature 153 172 1.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Pfam PF00801 PKD domain 995 1054 7.5E-13 T 22-04-2016 IPR000601 PKD domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Gene3D G3DSA:2.60.120.260 793 879 2.9E-14 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Gene3D G3DSA:2.60.120.260 566 664 1.1E-14 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795 13 175 3.1E-73 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795 560 652 3.1E-73 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 PANTHER PTHR10795 201 453 3.1E-73 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SUPERFAMILY SSF49785 772 879 3.27E-18 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Pfam PF00082 Subtilase family 154 417 7.5E-44 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 Gene3D G3DSA:3.40.50.200 103 439 6.3E-91 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SUPERFAMILY SSF49299 983 1063 1.7E-20 T 22-04-2016 IPR000601 PKD domain SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 217 227 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 158 169 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 SUPERFAMILY SSF52743 136 439 2.75E-76 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS19065 5a39008fa057c9a41b5c0988329f40e7 1151 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 379 389 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 Pfam PF01782 RimM N-terminal domain 9 90 4.0E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 SUPERFAMILY SSF50447 7 94 5.3E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 SUPERFAMILY SSF50346 100 176 6.28E-20 T 22-04-2016 IPR011033 PRC-barrel-like SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 Gene3D G3DSA:2.40.30.60 1 94 1.2E-33 T 22-04-2016 IPR002676 RimM protein GO:0006364 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 3.9E-59 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 24.19 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 Gene3D G3DSA:2.30.30.240 100 176 1.4E-28 T 22-04-2016 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 PANTHER PTHR33692:SF1 5 176 3.7E-59 T 22-04-2016 SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 Pfam PF05239 PRC-barrel domain 97 171 2.0E-11 T 22-04-2016 IPR027275 PRC-barrel domain SAMA_RS04650 2499bbdbf9ad3de8135f1317279a6a05 176 PANTHER PTHR33692 5 176 3.7E-59 T 22-04-2016 SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 SUPERFAMILY SSF52141 4 193 8.18E-49 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 SMART SM00987 27 187 2.4E-28 T 22-04-2016 SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 SMART SM00986 27 187 2.4E-28 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 Pfam PF03167 Uracil DNA glycosylase superfamily 31 186 3.9E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 Gene3D G3DSA:3.40.470.10 3 192 9.5E-40 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 PANTHER PTHR42160:SF1 1 197 2.6E-76 T 22-04-2016 SAMA_RS06300 85dfcfc60d2dc41766c1e7159a3befa5 197 PANTHER PTHR42160 1 197 2.6E-76 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 9.7E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Gene3D G3DSA:1.10.730.10 647 794 8.2E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946:SF7 240 569 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946:SF7 613 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 SUPERFAMILY SSF50677 226 414 1.67E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Pfam PF08264 Anticodon-binding domain of tRNA 698 822 5.0E-18 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Gene3D G3DSA:3.40.50.620 617 646 6.2E-155 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Gene3D G3DSA:3.40.50.620 424 571 6.2E-155 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Gene3D G3DSA:3.40.50.620 4 222 6.2E-155 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 858 23.51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 650 4.7E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 2.5E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 6.0E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946 240 569 0.0 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946 613 859 0.0 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 858 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 402 5.5E-79 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 SUPERFAMILY SSF47323 661 858 7.66E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 SUPERFAMILY SSF52374 415 667 1.26E-142 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 SUPERFAMILY SSF52374 8 226 1.26E-142 T 22-04-2016 SAMA_RS13490 30e0309b25e1a9be55a61fd08c8cfcf0 859 Gene3D G3DSA:3.90.740.10 223 423 3.7E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Pfam PF00289 Biotin carboxylase, N-terminal domain 12 121 4.7E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Gene3D G3DSA:2.40.50.100 601 671 8.3E-23 T 22-04-2016 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Gene3D G3DSA:3.30.1490.20 140 213 1.3E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Gene3D G3DSA:3.40.50.20 12 139 4.3E-53 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 SUPERFAMILY SSF51246 342 458 6.28E-39 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 22-04-2016 IPR001882 Biotin-binding site SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 SUPERFAMILY SSF51230 599 671 1.57E-20 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Pfam PF00364 Biotin-requiring enzyme 604 669 4.6E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 127 333 6.4E-79 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Pfam PF02785 Biotin carboxylase C-terminal domain 347 454 2.0E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 Gene3D G3DSA:3.30.470.20 215 455 1.0E-101 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 SMART SM00878 347 454 3.3E-55 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 SUPERFAMILY SSF56059 94 359 8.66E-70 T 22-04-2016 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 PANTHER PTHR18866:SF102 8 674 0.0 T 22-04-2016 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 PANTHER PTHR18866 8 674 0.0 T 22-04-2016 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS07090 7d593a5e0b8cb5a2618e2a62276214b2 684 SUPERFAMILY SSF52440 7 124 7.91E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 SUPERFAMILY SSF52218 4 172 5.87E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 PIRSF PIRSF038996 1 172 9.8E-67 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 PANTHER PTHR19384 141 172 2.6E-105 T 22-04-2016 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 PANTHER PTHR19384 1 120 2.6E-105 T 22-04-2016 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 PANTHER PTHR19384:SF77 141 172 2.6E-105 T 22-04-2016 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 PANTHER PTHR19384:SF77 1 120 2.6E-105 T 22-04-2016 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.2E-71 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 Pfam PF00258 Flavodoxin 6 160 1.4E-30 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SAMA_RS08875 f8e149cb20b218b509765f0361371816 175 Gene3D G3DSA:3.40.50.360 1 169 3.3E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Gene3D G3DSA:3.40.50.300 2 169 2.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Gene3D G3DSA:3.40.50.300 196 380 6.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Gene3D G3DSA:3.30.300.20 381 456 1.6E-21 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.2E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Pfam PF01926 50S ribosome-binding GTPase 202 319 3.0E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Hamap MF_00195 GTPase Der [der]. 2 458 37.868 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 375 454 3.3E-24 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 SMART SM00382 1 137 4.5 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 SMART SM00382 198 341 0.29 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PANTHER PTHR11649 1 462 2.6E-156 T 22-04-2016 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PIRSF PIRSF006485 1 463 2.3E-173 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 454 2.6E-173 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 SUPERFAMILY SSF52540 197 461 1.57E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 SUPERFAMILY SSF52540 4 170 9.88E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 6.3E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.3E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.3E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 PANTHER PTHR11649:SF5 1 462 2.6E-156 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 198 366 1.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS12350 981dd66839c9eb0b3fce202be429b608 488 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 7.1E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 Gene3D G3DSA:3.30.70.270 400 556 3.3E-54 T 22-04-2016 SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 PANTHER PTHR10799 275 554 2.5E-34 T 22-04-2016 SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 556 8.4E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 Pfam PF07696 7TMR-DISM extracellular 2 37 166 1.6E-16 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 SUPERFAMILY SSF55073 403 555 4.71E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 SMART SM00267 386 557 7.5E-61 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 PANTHER PTHR10799:SF750 275 554 2.5E-34 T 22-04-2016 SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 553 4.9E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15500 249acb2f6b7d0fa02f0fcf83c136813c 557 Pfam PF07695 7TM diverse intracellular signalling 180 382 9.5E-38 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PANTHER PTHR30012:SF6 2 406 1.9E-254 T 22-04-2016 SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 195 1.7E-31 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 5.1E-26 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.5E-40 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 2.5E-40 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.5E-40 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 2.5E-40 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 PANTHER PTHR30012 2 406 1.9E-254 T 22-04-2016 SAMA_RS00865 d7ad872275389b096df8dee50de0e506 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 1.8E-170 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 SMART SM01329 4 356 1.0E-190 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 PANTHER PTHR11835 2 362 1.5E-192 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 360 49.442 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 SUPERFAMILY SSF53659 1 361 6.72E-118 T 22-04-2016 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 PANTHER PTHR11835:SF35 2 362 1.5E-192 T 22-04-2016 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 354 4.4E-155 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 Gene3D G3DSA:3.40.718.10 1 360 6.2E-123 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS01800 5f717ec07fe54465c1a9aed9ea335af5 364 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 356 1.4E-126 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 PANTHER PTHR24221:SF188 10 599 1.1E-293 T 22-04-2016 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 PANTHER PTHR24221 10 599 1.1E-293 T 22-04-2016 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 Pfam PF00664 ABC transporter transmembrane region 28 310 1.8E-51 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 Gene3D G3DSA:1.20.1560.10 13 345 2.8E-71 T 22-04-2016 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 598 6.3E-230 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 SUPERFAMILY SSF52540 348 597 3.84E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 Pfam PF00005 ABC transporter 375 526 3.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 SMART SM00382 384 572 7.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 SUPERFAMILY SSF90123 14 343 3.66E-73 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS06980 f4aeeabc15f3c9370750c3f2b1c57790 599 Gene3D G3DSA:3.40.50.300 357 591 3.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82866 312 512 1.57E-36 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PANTHER PTHR32063:SF16 13 1067 0.0 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82714 198 283 3.27E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82693 290 343 2.88E-10 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82693 154 195 2.88E-10 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82714 752 836 1.44E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82693 51 144 6.8E-17 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PANTHER PTHR32063 13 1067 0.0 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:1.20.1640.10 308 523 5.1E-43 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82866 842 1068 6.02E-43 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 SUPERFAMILY SSF82693 588 703 1.28E-13 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:3.30.70.1430 52 152 5.5E-15 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 2.9E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 2.9E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.9E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 2.9E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 2.9E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:3.30.2090.10 198 283 3.5E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:3.30.2090.10 751 836 6.4E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:1.10.3850.10 842 1067 1.4E-69 T 22-04-2016 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Pfam PF00873 AcrB/AcrD/AcrF family 23 1065 2.3E-147 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11395 6593fd32e74ccd2a8eafbc73c6346d72 1073 Gene3D G3DSA:3.30.70.1430 593 701 3.8E-13 T 22-04-2016 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 366 1.4E-90 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 SUPERFAMILY SSF50156 94 200 8.65E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 SUPERFAMILY SSF52096 38 115 2.32E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 SUPERFAMILY SSF52096 190 361 2.32E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 Gene3D G3DSA:2.30.42.10 104 179 3.5E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 SMART SM00245 171 359 1.3E-61 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 Pfam PF13180 PDZ domain 100 171 7.7E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 PANTHER PTHR32060 51 362 7.1E-97 T 22-04-2016 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 Gene3D G3DSA:3.90.226.10 180 397 1.1E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 Pfam PF03572 Peptidase family S41 197 358 4.8E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 Gene3D G3DSA:3.30.750.44 53 103 7.6E-5 T 22-04-2016 SAMA_RS00295 4942127a9d597ebad3accb7bfcaaca87 398 SMART SM00228 97 170 5.5E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PANTHER PTHR11351 1 360 2.4E-190 T 22-04-2016 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PANTHER PTHR11351:SF35 1 360 2.4E-190 T 22-04-2016 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 2.3E-34 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 SAMA_RS00965 f6c2a668ccef86999ff133e6f81ed06f 368 Pfam PF00487 Fatty acid desaturase 39 260 4.9E-22 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.215 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 Gene3D G3DSA:3.40.50.1470 4 193 4.2E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 PANTHER PTHR17224:SF1 4 195 1.0E-79 T 22-04-2016 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 8.8E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 7.5E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 PANTHER PTHR17224 4 195 1.0E-79 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS13440 4b17dbbeae8c5695841e5eda996696b2 195 SUPERFAMILY SSF53178 4 193 4.71E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 Pfam PF02622 Uncharacterized ACR, COG1678 13 174 6.1E-51 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 PANTHER PTHR30327 1 187 2.3E-63 T 22-04-2016 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 Gene3D G3DSA:3.30.70.1300 42 130 2.6E-26 T 22-04-2016 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 187 38.835 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 PANTHER PTHR30327:SF1 1 187 2.3E-63 T 22-04-2016 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 Gene3D G3DSA:3.40.1740.10 131 178 1.3E-34 T 22-04-2016 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 Gene3D G3DSA:3.40.1740.10 3 41 1.3E-34 T 22-04-2016 SAMA_RS12905 49d9b5e4a46f576fb90066a5e3148735 187 SUPERFAMILY SSF143456 3 187 1.1E-67 T 22-04-2016 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 SMART SM00729 46 258 7.6E-37 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 Gene3D G3DSA:3.20.20.70 8 317 2.4E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 Hamap MF_01694 Biotin synthase [bioB]. 8 316 42.195 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 PIRSF PIRSF001619 1 321 5.8E-134 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 SMART SM00876 223 315 1.6E-44 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 SUPERFAMILY SSF102114 8 316 6.93E-92 T 22-04-2016 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 PANTHER PTHR22976:SF1 10 354 7.7E-173 T 22-04-2016 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 TIGRFAM TIGR00433 bioB: biotin synthase 18 314 4.6E-124 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 PANTHER PTHR22976 10 354 7.7E-173 T 22-04-2016 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 223 314 1.6E-18 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07485 816cd1001266e7ce47cf09b13281bb10 354 Pfam PF04055 Radical SAM superfamily 53 199 3.4E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 108 290 9.4E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 48 357 1.6E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 SUPERFAMILY SSF111369 51 297 2.48E-86 T 22-04-2016 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 372 7.2E-90 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 PANTHER PTHR30158:SF3 2 378 3.3E-172 T 22-04-2016 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 Gene3D G3DSA:2.40.50.100 64 96 2.9E-24 T 22-04-2016 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 Gene3D G3DSA:2.40.50.100 171 206 2.9E-24 T 22-04-2016 SAMA_RS18465 04051140039df77b01bd172db0eb64e1 378 PANTHER PTHR30158 2 378 3.3E-172 T 22-04-2016 SAMA_RS12625 d507c916fb8fefaa63022b49eb168c7f 603 Gene3D G3DSA:2.30.42.10 495 567 4.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS12625 d507c916fb8fefaa63022b49eb168c7f 603 SUPERFAMILY SSF50156 499 565 4.86E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS12625 d507c916fb8fefaa63022b49eb168c7f 603 PIRSF PIRSF016493 18 589 6.5E-196 T 22-04-2016 IPR024191 Peptidase M61 SAMA_RS12625 d507c916fb8fefaa63022b49eb168c7f 603 Pfam PF05299 M61 glycyl aminopeptidase 278 391 7.9E-37 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 PANTHER PTHR30037:SF3 176 208 3.2E-94 T 22-04-2016 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 PANTHER PTHR30037:SF3 1 158 3.2E-94 T 22-04-2016 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 SUPERFAMILY SSF48150 38 184 9.1E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 PANTHER PTHR30037 176 208 3.2E-94 T 22-04-2016 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 PANTHER PTHR30037 1 158 3.2E-94 T 22-04-2016 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 Pfam PF03352 Methyladenine glycosylase 39 139 3.8E-16 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SAMA_RS18455 c07df42fd624c655c8e21fb40552a5a3 228 Gene3D G3DSA:1.10.340.30 38 172 5.7E-27 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 282 1.7E-120 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 620 1.8E-297 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 SUPERFAMILY SSF52922 493 620 4.06E-32 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 SUPERFAMILY SSF52518 9 199 1.66E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Gene3D G3DSA:3.40.50.920 497 620 1.2E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Gene3D G3DSA:3.40.50.970 27 201 1.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Gene3D G3DSA:3.40.50.970 242 334 1.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Gene3D G3DSA:3.40.50.970 335 496 1.2E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 PANTHER PTHR11624:SF20 241 622 0.0 T 22-04-2016 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 621 45.896 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 SUPERFAMILY SSF52518 243 381 1.66E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Pfam PF02780 Transketolase, C-terminal domain 496 612 4.9E-27 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.6E-36 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 SMART SM00861 319 484 2.0E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 PANTHER PTHR11624 241 622 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS12725 ee7e0666b759a0af6255ce65a4013edf 622 SUPERFAMILY SSF52518 316 505 7.2E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 PANTHER PTHR32071:SF16 1 474 3.4E-169 T 22-04-2016 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 SUPERFAMILY SSF52540 154 384 4.79E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Gene3D G3DSA:3.40.50.300 153 324 3.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Pfam PF00072 Response regulator receiver domain 4 118 1.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 SMART SM00448 2 118 2.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Gene3D G3DSA:3.40.50.2300 3 138 1.7E-29 T 22-04-2016 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 SUPERFAMILY SSF52172 3 197 2.99E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 SUPERFAMILY SSF46689 357 466 5.38E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Pfam PF00158 Sigma-54 interaction domain 156 319 7.6E-64 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 464 5.4E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Gene3D G3DSA:1.10.8.60 326 393 1.3E-14 T 22-04-2016 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 2.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 2.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 PANTHER PTHR32071 1 474 3.4E-169 T 22-04-2016 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 Gene3D G3DSA:1.10.10.60 429 467 3.6E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14940 de991f8d72da4ec7673b704e94e02b04 475 SMART SM00382 173 316 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 SUPERFAMILY SSF56214 133 252 1.7E-22 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 133 251 4.0E-18 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 PANTHER PTHR12215:SF10 30 252 3.9E-35 T 22-04-2016 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 PANTHER PTHR12215 30 252 3.9E-35 T 22-04-2016 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 SUPERFAMILY SSF56214 33 114 8.72E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 Gene3D G3DSA:3.90.470.20 145 250 1.6E-23 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS05865 af79f074df89847d1bc869d0c459f06f 284 Gene3D G3DSA:3.90.470.20 30 144 1.3E-21 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS08125 6e96172c5394fab5951d70d611f5fdf2 237 SUPERFAMILY SSF56281 19 225 3.55E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS08125 6e96172c5394fab5951d70d611f5fdf2 237 Pfam PF14234 Domain of unknown function (DUF4336) 20 147 2.4E-16 T 22-04-2016 IPR025638 Protein of unknown function DUF4336 SAMA_RS08125 6e96172c5394fab5951d70d611f5fdf2 237 PANTHER PTHR33835 7 226 6.3E-30 T 22-04-2016 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PANTHER PTHR11958:SF68 14 404 1.1E-237 T 22-04-2016 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 SUPERFAMILY SSF118215 16 397 1.18E-93 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 Gene3D G3DSA:1.10.3860.10 15 401 3.5E-82 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 2.1E-15 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 2.1E-15 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 2.1E-15 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 2.1E-15 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PRINTS PR00173 Glutamate-aspartate symporter signature 221 240 2.1E-15 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 PANTHER PTHR11958 14 404 1.1E-237 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 4 405 36.528 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 SAMA_RS11485 8bc9ec32ed517f59c15ade295d8ade84 405 Pfam PF00375 Sodium:dicarboxylate symporter family 16 395 1.3E-64 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS04195 ac153d5aaf40a3a43983d876daa65149 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 1.7E-46 T 22-04-2016 IPR007437 Putative member of DMT superfamily SAMA_RS04195 ac153d5aaf40a3a43983d876daa65149 116 PIRSF PIRSF021239 1 114 1.0E-55 T 22-04-2016 IPR007437 Putative member of DMT superfamily SAMA_RS04195 ac153d5aaf40a3a43983d876daa65149 116 PANTHER PTHR38482 1 116 1.3E-61 T 22-04-2016 SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 Pfam PF01039 Carboxyl transferase domain 48 525 4.6E-155 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 PANTHER PTHR22855:SF35 1 535 0.0 T 22-04-2016 SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 SUPERFAMILY SSF52096 20 269 1.32E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 Gene3D G3DSA:3.90.226.10 29 274 1.4E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 Gene3D G3DSA:3.90.226.10 275 530 6.1E-95 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 SUPERFAMILY SSF52096 237 517 3.48E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07100 db4cf468fd3f2d24ef98abdf597f0073 535 PANTHER PTHR22855 1 535 0.0 T 22-04-2016 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 PANTHER PTHR32089:SF65 158 499 3.5E-200 T 22-04-2016 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 SUPERFAMILY SSF58104 194 501 4.19E-70 T 22-04-2016 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 398 4.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 367 4.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 150 170 4.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 301 498 1.6E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 188 499 0.002 T 22-04-2016 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 Gene3D G3DSA:1.10.287.950 257 473 6.0E-54 T 22-04-2016 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 SMART SM00283 242 503 2.8E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS10215 4763a083ecf338441aeef91f6dbe4552 504 PANTHER PTHR32089 158 499 3.5E-200 T 22-04-2016 SAMA_RS10565 6e334657318193d3559c714b04522933 636 SUPERFAMILY SSF53474 389 631 6.99E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10565 6e334657318193d3559c714b04522933 636 Pfam PF00326 Prolyl oligopeptidase family 436 634 2.9E-39 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS10565 6e334657318193d3559c714b04522933 636 SUPERFAMILY SSF82171 42 365 5.49E-10 T 22-04-2016 SAMA_RS10565 6e334657318193d3559c714b04522933 636 PANTHER PTHR11731 146 631 6.5E-71 T 22-04-2016 SAMA_RS10565 6e334657318193d3559c714b04522933 636 PANTHER PTHR11731:SF140 146 631 6.5E-71 T 22-04-2016 SAMA_RS10565 6e334657318193d3559c714b04522933 636 Gene3D G3DSA:2.130.10.10 165 285 1.2E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS10565 6e334657318193d3559c714b04522933 636 Gene3D G3DSA:2.130.10.10 30 57 1.2E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS10565 6e334657318193d3559c714b04522933 636 Gene3D G3DSA:3.40.50.1820 332 633 1.3E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18990 9bc39581ce6be9856a0f3904ba28a38b 262 PANTHER PTHR13696:SF52 2 261 8.3E-91 T 22-04-2016 SAMA_RS18990 9bc39581ce6be9856a0f3904ba28a38b 262 Pfam PF13614 AAA domain 2 177 5.1E-63 T 22-04-2016 IPR025669 AAA domain SAMA_RS18990 9bc39581ce6be9856a0f3904ba28a38b 262 SUPERFAMILY SSF52540 2 254 2.97E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18990 9bc39581ce6be9856a0f3904ba28a38b 262 Gene3D G3DSA:3.40.50.300 3 259 3.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18990 9bc39581ce6be9856a0f3904ba28a38b 262 PANTHER PTHR13696 2 261 8.3E-91 T 22-04-2016 SAMA_RS00775 d8494535a8bda92e88296c9477945204 317 Pfam PF06629 MltA-interacting protein MipA 70 317 2.4E-37 T 22-04-2016 IPR010583 MltA-interacting MipA SAMA_RS00775 d8494535a8bda92e88296c9477945204 317 PANTHER PTHR38776 166 317 6.0E-21 T 22-04-2016 SAMA_RS00775 d8494535a8bda92e88296c9477945204 317 PANTHER PTHR38776 30 136 6.0E-21 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 Gene3D G3DSA:2.70.98.10 59 376 2.0E-96 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143:SF22 302 424 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143:SF22 440 773 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143:SF22 54 281 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 Pfam PF07971 Glycosyl hydrolase family 92 297 772 3.3E-164 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 55 771 1.2E-198 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 Gene3D G3DSA:1.20.1050.60 400 488 2.4E-32 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 Gene3D G3DSA:3.30.2080.10 642 772 4.0E-47 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 Gene3D G3DSA:1.20.1610.10 490 641 8.4E-65 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143 302 424 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143 440 773 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 PANTHER PTHR12143 54 281 1.2E-202 T 22-04-2016 SAMA_RS01635 169da11fa6e785719d1d87e4ba63f11d 773 SUPERFAMILY SSF48208 316 758 1.97E-32 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 447 1.4E-22 T 22-04-2016 IPR000014 PAS domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 527 7.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SMART SM00387 568 678 7.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SUPERFAMILY SSF47384 451 527 1.96E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Pfam PF00989 PAS fold 326 438 5.6E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Gene3D G3DSA:1.10.287.130 454 514 7.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PANTHER PTHR24423:SF502 323 678 1.6E-112 T 22-04-2016 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PANTHER PTHR24423:SF502 11 35 1.6E-112 T 22-04-2016 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SUPERFAMILY SSF55874 529 678 2.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SMART SM00091 325 391 1.0E-10 T 22-04-2016 IPR000014 PAS domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SUPERFAMILY SSF55785 337 447 3.14E-23 T 22-04-2016 IPR000014 PAS domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 571 676 4.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SMART SM01079 58 245 5.5E-77 T 22-04-2016 IPR006189 CHASE domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PANTHER PTHR24423 323 678 1.6E-112 T 22-04-2016 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PANTHER PTHR24423 11 35 1.6E-112 T 22-04-2016 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Gene3D G3DSA:3.30.450.20 322 439 2.8E-23 T 22-04-2016 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Gene3D G3DSA:3.30.565.10 515 676 9.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 Pfam PF03924 CHASE domain 61 243 2.2E-54 T 22-04-2016 IPR006189 CHASE domain SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 675 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 620 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 4.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16485 338c17e3bc5ed1d1eb18ed3749b291b4 683 SMART SM00388 461 529 3.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 Gene3D G3DSA:3.30.70.60 96 197 1.5E-32 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 Gene3D G3DSA:1.10.287.540 59 95 7.4E-16 T 22-04-2016 IPR023218 UPF0291 structural domain SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 PIRSF PIRSF016482 1 210 1.4E-56 T 22-04-2016 IPR007445 Pilus assembly protein, PilO SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 PANTHER PTHR39555 2 204 2.2E-58 T 22-04-2016 SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 Pfam PF04350 Pilus assembly protein, PilO 51 192 5.3E-52 T 22-04-2016 IPR007445 Pilus assembly protein, PilO SAMA_RS17545 c9a69960483f6928528716343a93d8f9 210 PANTHER PTHR39555:SF1 2 204 2.2E-58 T 22-04-2016 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 PANTHER PTHR11403:SF0 1 119 2.3E-114 T 22-04-2016 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 PANTHER PTHR11403:SF0 137 291 2.3E-114 T 22-04-2016 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 Pfam PF00510 Cytochrome c oxidase subunit III 7 290 3.2E-48 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 Gene3D G3DSA:1.20.120.80 78 290 1.3E-61 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 Gene3D G3DSA:1.10.287.70 1 74 5.2E-20 T 22-04-2016 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 PANTHER PTHR11403 1 119 2.3E-114 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 PANTHER PTHR11403 137 291 2.3E-114 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SAMA_RS18130 9dc694c0c5e16bbeac6136612df58e49 291 SUPERFAMILY SSF81452 2 291 5.23E-79 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 364 39.79 T 22-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 PANTHER PTHR11075 25 362 3.0E-161 T 22-04-2016 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 Pfam PF00472 RF-1 domain 228 336 1.4E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 PANTHER PTHR11075:SF6 25 362 3.0E-161 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 SUPERFAMILY SSF75620 16 363 2.22E-139 T 22-04-2016 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 6 362 4.9E-166 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 Gene3D G3DSA:3.30.160.20 226 305 1.2E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 Gene3D G3DSA:1.20.58.410 6 115 5.4E-36 T 22-04-2016 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 Pfam PF03462 PCRF domain 30 219 1.5E-57 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SAMA_RS15025 67dfa9b08dba0a5cacc3996121a88ff4 364 SMART SM00937 84 194 7.1E-54 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 Gene3D G3DSA:3.90.1200.10 105 322 2.0E-43 T 22-04-2016 SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 SUPERFAMILY SSF56112 5 321 9.91E-80 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 PANTHER PTHR39573 1 325 8.0E-143 T 22-04-2016 SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 Hamap MF_01497 Stress response kinase A [srkA]. 3 316 44.425 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 PANTHER PTHR39573:SF1 1 325 8.0E-143 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SAMA_RS17305 835d083dc1b848c879461474a4aa4f40 325 Pfam PF01636 Phosphotransferase enzyme family 31 262 2.2E-37 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 PANTHER PTHR23135:SF17 1 441 5.3E-270 T 22-04-2016 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Pfam PF08245 Mur ligase middle domain 108 293 1.1E-20 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.6E-219 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 SUPERFAMILY SSF51984 1 89 3.27E-23 T 22-04-2016 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Gene3D G3DSA:3.90.190.20 315 450 1.3E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Gene3D G3DSA:3.40.1190.10 93 314 2.2E-81 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 451 57.71 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 388 8.1E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 SUPERFAMILY SSF53244 313 448 2.75E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Gene3D G3DSA:3.40.50.720 1 90 7.2E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 PANTHER PTHR23135 1 441 5.3E-270 T 22-04-2016 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 Pfam PF01225 Mur ligase family, catalytic domain 2 98 4.2E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS04040 c18fa83463be43cc05963aaa973a234e 458 SUPERFAMILY SSF53623 98 310 3.27E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 Gene3D G3DSA:3.40.50.2300 3 149 2.9E-36 T 22-04-2016 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 SMART SM00448 5 118 7.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 Gene3D G3DSA:1.10.10.10 150 208 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.9E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.9E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.9E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 PANTHER PTHR26402 5 209 1.7E-89 T 22-04-2016 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 SUPERFAMILY SSF52172 4 136 7.54E-32 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 PANTHER PTHR26402:SF458 5 209 1.7E-89 T 22-04-2016 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 3.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 SUPERFAMILY SSF46894 140 208 1.67E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS03425 dea1c44e1110e10f297a04c0fbf7a094 209 SMART SM00421 149 206 1.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 SUPERFAMILY SSF46689 6 74 3.78E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 40.988 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 57 7.6E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 PANTHER PTHR30055:SF58 1 191 6.0E-110 T 22-04-2016 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 Gene3D G3DSA:1.10.357.10 6 194 1.9E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS01740 aa59f97de4743a4d122ba39dec2f1c4a 197 PANTHER PTHR30055 1 191 6.0E-110 T 22-04-2016 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 SMART SM00052 136 383 8.2E-58 T 22-04-2016 IPR001633 EAL domain SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 Gene3D G3DSA:3.20.20.450 142 390 5.4E-63 T 22-04-2016 IPR001633 EAL domain SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 SUPERFAMILY SSF52172 2 127 1.85E-20 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 SMART SM00448 3 122 2.7E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 PANTHER PTHR33121:SF13 139 410 2.3E-49 T 22-04-2016 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 Gene3D G3DSA:3.40.50.2300 2 127 1.0E-20 T 22-04-2016 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 SUPERFAMILY SSF141868 142 392 3.66E-63 T 22-04-2016 IPR001633 EAL domain SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 Pfam PF00072 Response regulator receiver domain 5 118 2.4E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 PANTHER PTHR33121 139 410 2.3E-49 T 22-04-2016 SAMA_RS04240 a2ff950eae1a12ad6d9e30f416c9de09 411 Pfam PF00563 EAL domain 142 378 4.1E-54 T 22-04-2016 IPR001633 EAL domain SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 PANTHER PTHR33989:SF4 13 411 1.2E-48 T 22-04-2016 SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 Pfam PF00563 EAL domain 430 653 1.2E-56 T 22-04-2016 IPR001633 EAL domain SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 SUPERFAMILY SSF141868 433 666 6.8E-61 T 22-04-2016 IPR001633 EAL domain SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 PANTHER PTHR33989 13 411 1.2E-48 T 22-04-2016 SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 Pfam PF02378 Phosphotransferase system, EIIC 18 315 1.6E-15 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 Gene3D G3DSA:3.20.20.450 431 663 5.6E-63 T 22-04-2016 IPR001633 EAL domain SAMA_RS14445 f829d666f6e48a25cdf23fc992fdd5d9 678 SMART SM00052 420 659 4.0E-62 T 22-04-2016 IPR001633 EAL domain SAMA_RS16985 f43cdc5ffeb9fa769a0fcb4ee6957a2b 235 PANTHER PTHR39327:SF1 19 235 1.0E-96 T 22-04-2016 SAMA_RS16985 f43cdc5ffeb9fa769a0fcb4ee6957a2b 235 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 72 177 2.5E-15 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SAMA_RS16985 f43cdc5ffeb9fa769a0fcb4ee6957a2b 235 PANTHER PTHR39327 19 235 1.0E-96 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 SUPERFAMILY SSF53697 245 609 2.97E-117 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Pfam PF13522 Glutamine amidotransferase domain 64 182 2.6E-22 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 SUPERFAMILY SSF56235 2 233 4.46E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Gene3D G3DSA:3.60.20.10 2 237 3.0E-78 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Pfam PF01380 SIS domain 290 417 1.0E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Pfam PF01380 SIS domain 462 591 2.3E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Gene3D G3DSA:3.40.50.10490 245 447 3.8E-69 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.488 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 Gene3D G3DSA:3.40.50.10490 448 609 1.5E-68 T 22-04-2016 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 2.7E-263 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SAMA_RS18920 5d979c28e94f507f40957aaafde71fd9 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SAMA_RS17265 7d9e4d7ca791737a268ecf49dd3a2e5d 449 SUPERFAMILY SSF53474 3 176 1.45E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS17265 7d9e4d7ca791737a268ecf49dd3a2e5d 449 Gene3D G3DSA:3.40.50.1820 3 130 4.9E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS17265 7d9e4d7ca791737a268ecf49dd3a2e5d 449 Gene3D G3DSA:3.40.50.1820 354 378 4.9E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 Pfam PF01595 Domain of unknown function DUF21 6 178 4.4E-29 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 PANTHER PTHR22777 1 353 7.2E-164 T 22-04-2016 SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 PANTHER PTHR22777:SF4 1 353 7.2E-164 T 22-04-2016 SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 SUPERFAMILY SSF54631 181 312 1.26E-25 T 22-04-2016 SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 Pfam PF00571 CBS domain 263 311 3.1E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 Pfam PF00571 CBS domain 193 247 2.0E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS12390 f7a8e8fd697692ffe62854f75f820ae5 356 Gene3D G3DSA:3.10.580.10 180 311 1.1E-15 T 22-04-2016 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PIRSF PIRSF002097 1 101 1.5E-43 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 Pfam PF02954 Bacterial regulatory protein, Fis family 60 98 5.2E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PANTHER PTHR32071 30 101 1.1E-25 T 22-04-2016 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PRINTS PR01591 DNA-binding protein FIS signature 45 60 1.6E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PRINTS PR01591 DNA-binding protein FIS signature 29 45 1.6E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PRINTS PR01591 DNA-binding protein FIS signature 60 72 1.6E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 81 101 9.9E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 64 81 9.9E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 101 30.797 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 SUPERFAMILY SSF46689 28 101 7.53E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16800 9b534e303ff642a18a0c3eb109ebbf46 101 Gene3D G3DSA:1.10.10.60 30 101 2.0E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 PANTHER PTHR26402 3 229 1.1E-146 T 22-04-2016 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 SUPERFAMILY SSF46894 129 226 5.67E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 SUPERFAMILY SSF52172 2 126 7.4E-44 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 5.0E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 Pfam PF00072 Response regulator receiver domain 5 117 3.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 SMART SM00862 150 225 1.4E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 Gene3D G3DSA:1.10.10.10 129 227 6.6E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 PANTHER PTHR26402:SF576 3 229 1.1E-146 T 22-04-2016 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 SMART SM00448 3 116 6.1E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 Gene3D G3DSA:3.40.50.2300 3 126 7.7E-43 T 22-04-2016 SAMA_RS05630 13338a319207b334a34828a7bf87047c 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.2E-111 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 Gene3D G3DSA:3.40.50.270 4 153 4.8E-50 T 22-04-2016 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 149 4.7E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 SMART SM00226 6 152 1.6E-44 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 SUPERFAMILY SSF52788 4 153 4.32E-47 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PANTHER PTHR11717:SF7 3 155 5.2E-58 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 2.6E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 2.6E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 2.6E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 2.6E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SAMA_RS10410 690fa07a190458f46ba3ba50cfde4fc9 158 PANTHER PTHR11717 3 155 5.2E-58 T 22-04-2016 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 490 1.1E-85 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PANTHER PTHR34217 1 491 1.1E-228 T 22-04-2016 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PANTHER PTHR34217:SF1 1 491 1.1E-228 T 22-04-2016 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PIRSF PIRSF006615 1 493 1.7E-182 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 SUPERFAMILY SSF55486 4 491 1.88E-110 T 22-04-2016 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 442 460 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS04205 fd2656f0f7e7617d7ece99eccbbc6f18 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 2.6E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 Gene3D G3DSA:1.10.3720.10 432 514 4.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 Gene3D G3DSA:1.10.3720.10 587 748 4.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 Gene3D G3DSA:1.10.3720.10 41 63 4.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 SUPERFAMILY SSF50978 135 155 5.68E-6 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 SUPERFAMILY SSF50978 237 412 5.68E-6 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 SUPERFAMILY SSF161098 445 513 1.74E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 SUPERFAMILY SSF161098 597 732 1.74E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 468 745 1.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 PANTHER PTHR30425 582 751 2.9E-176 T 22-04-2016 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 PANTHER PTHR30425 321 516 2.9E-176 T 22-04-2016 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 PANTHER PTHR30425:SF3 582 751 2.9E-176 T 22-04-2016 SAMA_RS07335 403a404f5560cad10328bf8a1111ed0d 751 PANTHER PTHR30425:SF3 321 516 2.9E-176 T 22-04-2016 SAMA_RS11000 fe5a1488108fa2279561e55d8fe35bc4 115 Gene3D G3DSA:3.10.180.10 6 114 1.2E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11000 fe5a1488108fa2279561e55d8fe35bc4 115 SUPERFAMILY SSF54593 2 114 2.54E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11000 fe5a1488108fa2279561e55d8fe35bc4 115 PANTHER PTHR33993 1 115 1.9E-56 T 22-04-2016 SAMA_RS11000 fe5a1488108fa2279561e55d8fe35bc4 115 PANTHER PTHR33993:SF1 1 115 1.9E-56 T 22-04-2016 SAMA_RS15920 de3bf1fe77ad8729eb2c106c3bea609c 246 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 246 3.2E-65 T 22-04-2016 IPR026387 Outer membrane protein SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 416 48.455 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 PANTHER PTHR22572 17 389 5.4E-171 T 22-04-2016 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 Gene3D G3DSA:3.90.550.10 336 379 2.5E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 Gene3D G3DSA:3.90.550.10 16 293 2.5E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 SUPERFAMILY SSF51161 303 413 3.19E-17 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 SUPERFAMILY SSF53448 14 286 1.2E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 SUPERFAMILY SSF53448 370 386 1.2E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 Pfam PF00483 Nucleotidyl transferase 18 283 3.4E-61 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 389 7.1E-150 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12795 42bfff64f61de88e882aef5b3a625014 422 PANTHER PTHR22572:SF10 17 389 5.4E-171 T 22-04-2016 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 SUPERFAMILY SSF81340 34 444 2.22E-81 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PRINTS PR00762 Chloride channel signature 179 198 2.1E-17 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PRINTS PR00762 Chloride channel signature 393 412 2.1E-17 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PRINTS PR00762 Chloride channel signature 375 391 2.1E-17 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PRINTS PR00762 Chloride channel signature 128 147 2.1E-17 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 Pfam PF00654 Voltage gated chloride channel 86 424 7.7E-69 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 Gene3D G3DSA:1.10.3080.10 28 444 1.3E-65 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PANTHER PTHR11689:SF14 129 491 2.9E-56 T 22-04-2016 SAMA_RS04405 6ab82f76635ec50a2ef99327df7603bd 571 PANTHER PTHR11689 129 491 2.9E-56 T 22-04-2016 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SUPERFAMILY SSF52172 122 259 3.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 PANTHER PTHR26402 122 232 2.8E-29 T 22-04-2016 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 415 4.2E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 411 5.3E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Gene3D G3DSA:3.40.50.2300 122 248 2.3E-29 T 22-04-2016 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SMART SM00448 122 236 2.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SMART SM00448 1 112 4.6E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Pfam PF00072 Response regulator receiver domain 124 234 1.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Pfam PF00072 Response regulator receiver domain 3 101 1.6E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Gene3D G3DSA:3.30.70.270 255 414 1.8E-48 T 22-04-2016 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 Gene3D G3DSA:3.40.50.2300 2 120 5.4E-19 T 22-04-2016 SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SUPERFAMILY SSF55073 258 414 7.85E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SMART SM00267 243 415 3.3E-55 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS07860 a07c7d768860ccb604cf9fb6f140aa04 416 SUPERFAMILY SSF52172 2 118 1.85E-19 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 PANTHER PTHR24362:SF247 46 292 4.4E-23 T 22-04-2016 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 SMART SM00220 46 371 5.3E-10 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 PANTHER PTHR24362 46 292 4.4E-23 T 22-04-2016 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 163 175 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 Gene3D G3DSA:1.10.510.10 139 257 6.3E-15 T 22-04-2016 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 Gene3D G3DSA:3.30.200.20 45 138 3.4E-12 T 22-04-2016 SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 SUPERFAMILY SSF56112 45 293 2.7E-35 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS02885 6f4e399a991053e3a0b5b6181fe6baf7 606 Pfam PF00069 Protein kinase domain 46 257 6.2E-20 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SAMA_RS04385 66d034f56f03e23ea540c0df56b339fc 415 Pfam PF03600 Citrate transporter 17 360 1.2E-25 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SAMA_RS04385 66d034f56f03e23ea540c0df56b339fc 415 PANTHER PTHR10283:SF91 7 402 3.0E-48 T 22-04-2016 SAMA_RS04385 66d034f56f03e23ea540c0df56b339fc 415 PANTHER PTHR10283 7 402 3.0E-48 T 22-04-2016 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 Gene3D G3DSA:1.10.10.10 1 80 2.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 SUPERFAMILY SSF46785 1 111 2.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 SUPERFAMILY SSF53850 93 292 3.98E-35 T 22-04-2016 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 Pfam PF03466 LysR substrate binding domain 90 291 4.5E-33 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 Gene3D G3DSA:3.40.190.10 94 181 8.9E-19 T 22-04-2016 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 PANTHER PTHR30126:SF25 1 292 4.6E-148 T 22-04-2016 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 PANTHER PTHR30126 1 292 4.6E-148 T 22-04-2016 SAMA_RS13770 e20b2d2397629cc3f1ea8ab1d505e7d6 299 Gene3D G3DSA:3.40.190.10 182 266 4.6E-8 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PANTHER PTHR21235:SF1 13 236 8.1E-84 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 19 213 1.1E-61 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PANTHER PTHR21235 13 236 8.1E-84 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 Pfam PF00117 Glutamine amidotransferase class-I 20 212 8.8E-20 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PRINTS PR00097 Anthranilate synthase component II signature 192 205 2.5E-5 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PRINTS PR00097 Anthranilate synthase component II signature 87 98 2.5E-5 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 17 214 33.121 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 SUPERFAMILY SSF52317 19 213 1.8E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 Gene3D G3DSA:3.40.50.880 16 214 6.0E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 87 98 2.4E-5 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PRINTS PR00096 Glutamine amidotransferase superfamily signature 192 205 2.4E-5 T 22-04-2016 SAMA_RS10170 b487f58bf5c5f0e23158ce18bbc6a5d0 237 PIRSF PIRSF000495 16 217 1.7E-63 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 PANTHER PTHR30632 22 260 7.8E-89 T 22-04-2016 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 SUPERFAMILY SSF53850 21 259 1.14E-39 T 22-04-2016 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 PANTHER PTHR30632:SF6 22 260 7.8E-89 T 22-04-2016 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 147 1.8E-20 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 Pfam PF13531 Bacterial extracellular solute-binding protein 24 256 6.6E-43 T 22-04-2016 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 Gene3D G3DSA:3.40.190.10 129 222 3.7E-8 T 22-04-2016 SAMA_RS16145 e20eca4cc095beccaee01f3b6150a422 260 Gene3D G3DSA:3.40.190.10 23 128 3.3E-23 T 22-04-2016 SAMA_RS05585 cc07f019229d80d8cf4eafd6c93e1095 365 PANTHER PTHR19328:SF33 11 358 3.6E-79 T 22-04-2016 SAMA_RS05585 cc07f019229d80d8cf4eafd6c93e1095 365 Pfam PF07995 Glucose / Sorbosone dehydrogenase 121 348 5.0E-16 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 SAMA_RS05585 cc07f019229d80d8cf4eafd6c93e1095 365 SUPERFAMILY SSF50952 16 357 3.14E-31 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SAMA_RS05585 cc07f019229d80d8cf4eafd6c93e1095 365 Gene3D G3DSA:2.120.10.30 20 358 2.6E-54 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05585 cc07f019229d80d8cf4eafd6c93e1095 365 PANTHER PTHR19328 11 358 3.6E-79 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 Gene3D G3DSA:2.40.440.10 247 294 6.8E-13 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 Gene3D G3DSA:2.40.440.10 359 413 6.8E-13 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 Gene3D G3DSA:1.10.101.10 156 230 2.7E-14 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 Pfam PF01471 Putative peptidoglycan binding domain 164 222 5.8E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582 341 468 3.0E-80 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582 113 168 3.0E-80 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582 187 307 3.0E-80 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 SUPERFAMILY SSF47090 149 229 6.43E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 SUPERFAMILY SSF141523 247 303 4.05E-19 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 SUPERFAMILY SSF141523 357 406 4.05E-19 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 Pfam PF03734 L,D-transpeptidase catalytic domain 250 417 8.2E-28 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582:SF10 341 468 3.0E-80 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582:SF10 113 168 3.0E-80 T 22-04-2016 SAMA_RS08425 27ab5b7e471a83f673c1a3189f326c99 480 PANTHER PTHR30582:SF10 187 307 3.0E-80 T 22-04-2016 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 SUPERFAMILY SSF46894 132 194 5.95E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 SMART SM00448 2 113 4.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 SUPERFAMILY SSF52172 1 153 5.41E-32 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 SMART SM00421 137 194 3.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 PANTHER PTHR26402:SF609 2 192 1.4E-48 T 22-04-2016 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 Gene3D G3DSA:1.10.10.10 139 194 8.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 Gene3D G3DSA:3.40.50.2300 1 138 1.5E-33 T 22-04-2016 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 9.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 9.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 9.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 3.2E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS12540 30d02a7ed1fcd996ae1a2bb7a160a18a 201 PANTHER PTHR26402 2 192 1.4E-48 T 22-04-2016 SAMA_RS06610 1f294bd7cf8efd79d6dad88e4ccacb5a 92 SUPERFAMILY SSF54534 4 89 1.31E-25 T 22-04-2016 SAMA_RS06610 1f294bd7cf8efd79d6dad88e4ccacb5a 92 PANTHER PTHR10657 3 91 2.4E-34 T 22-04-2016 SAMA_RS06610 1f294bd7cf8efd79d6dad88e4ccacb5a 92 Gene3D G3DSA:3.10.50.40 4 91 6.2E-29 T 22-04-2016 SAMA_RS06610 1f294bd7cf8efd79d6dad88e4ccacb5a 92 Pfam PF13616 PPIC-type PPIASE domain 14 90 9.7E-19 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Pfam PF00679 Elongation factor G C-terminus 396 477 8.9E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 SUPERFAMILY SSF50447 151 299 1.92E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PANTHER PTHR23115:SF14 3 593 2.6E-300 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 SUPERFAMILY SSF54980 398 512 7.19E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Gene3D G3DSA:3.40.50.300 3 205 5.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PANTHER PTHR23115 3 593 2.6E-300 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 SUPERFAMILY SSF52540 3 219 6.54E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Gene3D G3DSA:3.30.70.870 304 399 1.2E-38 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Gene3D G3DSA:3.30.70.240 400 478 4.2E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 2.0E-292 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 4.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.1E-56 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.2E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.2E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.2E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.2E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Gene3D G3DSA:2.40.50.250 483 577 3.4E-40 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 SUPERFAMILY SSF54980 302 387 1.44E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Gene3D G3DSA:2.40.30.10 206 303 1.9E-27 T 22-04-2016 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.9E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS17770 fbadad86d0547637be0e8a07d3f6c752 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 537 4.5E-94 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 560 1.4E-140 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 SUPERFAMILY SSF52009 124 240 5.49E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 445 463 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PANTHER PTHR22931:SF28 66 548 1.9E-153 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 292 311 4.3E-18 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 498 510 4.3E-18 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 4.3E-18 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 4.3E-18 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Gene3D G3DSA:3.20.20.60 254 564 8.3E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PIRSF PIRSF000732 1 567 8.7E-176 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 224 3.5E-18 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 PANTHER PTHR22931 66 548 1.9E-153 T 22-04-2016 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 125 1.8E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Gene3D G3DSA:1.10.274.10 32 131 2.7E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 SUPERFAMILY SSF47831 27 142 1.83E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 183 194 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 Gene3D G3DSA:3.50.30.10 132 253 6.1E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS08620 66716ed0fe8944499427640f42945086 567 SUPERFAMILY SSF51621 248 540 1.39E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS01305 7fa1280154e3019fbe2a46d57bb3e515 167 PANTHER PTHR30009 10 153 1.0E-71 T 22-04-2016 SAMA_RS01305 7fa1280154e3019fbe2a46d57bb3e515 167 Pfam PF03918 Cytochrome C biogenesis protein 11 152 3.4E-54 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family SAMA_RS01305 7fa1280154e3019fbe2a46d57bb3e515 167 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 7 129 1.6E-53 T 22-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF SAMA_RS01305 7fa1280154e3019fbe2a46d57bb3e515 167 PANTHER PTHR30009:SF6 10 153 1.0E-71 T 22-04-2016 SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 Gene3D G3DSA:2.60.440.10 170 243 5.0E-28 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 PANTHER PTHR39455:SF1 1 244 1.2E-101 T 22-04-2016 SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 243 30.828 T 22-04-2016 IPR009777 Cell division protein ZapD SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 PANTHER PTHR39455 1 244 1.2E-101 T 22-04-2016 SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 Pfam PF07072 Protein of unknown function (DUF1342) 18 222 2.3E-71 T 22-04-2016 IPR009777 Cell division protein ZapD SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 Gene3D G3DSA:1.10.3900.10 12 169 3.3E-57 T 22-04-2016 SAMA_RS01990 dca07097d9280d72b71f5109ac085888 244 SUPERFAMILY SSF160950 2 243 4.18E-86 T 22-04-2016 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 Pfam PF00999 Sodium/hydrogen exchanger family 10 374 6.0E-65 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 Gene3D G3DSA:3.30.70.1450 576 645 4.7E-19 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 SUPERFAMILY SSF116726 576 643 3.92E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 PANTHER PTHR16254 1 561 1.5E-204 T 22-04-2016 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 Pfam PF02254 TrkA-N domain 407 520 1.0E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 Pfam PF02080 TrkA-C domain 577 645 1.9E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 SUPERFAMILY SSF51735 407 546 3.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 PANTHER PTHR16254:SF6 1 561 1.5E-204 T 22-04-2016 SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 Gene3D G3DSA:3.40.50.720 406 535 2.0E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06070 870fb874cb037b43b103e842a19a8d9f 648 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 284 1.4E-74 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 SUPERFAMILY SSF55174 320 398 4.51E-16 T 22-04-2016 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PANTHER PTHR11766 4 398 1.0E-235 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 397 4.1E-123 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 Gene3D G3DSA:3.40.50.620 11 227 2.5E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 Gene3D G3DSA:1.10.240.10 228 326 2.6E-37 T 22-04-2016 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 Gene3D G3DSA:3.10.290.10 327 398 4.9E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.1E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.1E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.1E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 SUPERFAMILY SSF52374 7 312 7.98E-97 T 22-04-2016 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 PANTHER PTHR11766:SF1 4 398 1.0E-235 T 22-04-2016 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 2.2E-78 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04450 5610adb7aa51160dd65eb4cce31fedc3 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.435 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SAMA_RS18085 fc14ef21e96bd554f9e5b106c90f853f 141 Pfam PF00042 Globin 7 101 3.9E-13 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 SAMA_RS18085 fc14ef21e96bd554f9e5b106c90f853f 141 Gene3D G3DSA:1.10.490.10 3 137 1.7E-40 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SAMA_RS18085 fc14ef21e96bd554f9e5b106c90f853f 141 PANTHER PTHR22924 1 132 4.0E-35 T 22-04-2016 SAMA_RS18085 fc14ef21e96bd554f9e5b106c90f853f 141 SUPERFAMILY SSF46458 1 137 1.13E-41 T 22-04-2016 IPR009050 Globin-like SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 29 3.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 676 703 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Pfam PF00384 Molybdopterin oxidoreductase 99 524 3.2E-78 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 SMART SM00926 42 96 3.9E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 469 486 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 95 5.9E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Pfam PF01568 Molydopterin dinucleotide binding domain 639 748 2.4E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:2.20.25.90 41 99 4.3E-17 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:2.40.40.20 628 760 1.7E-29 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 PANTHER PTHR11615:SF139 42 751 1.0E-240 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 47 64 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:3.40.228.10 176 360 9.9E-54 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 PANTHER PTHR11615 42 751 1.0E-240 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 SUPERFAMILY SSF53706 42 617 3.93E-146 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 SUPERFAMILY SSF50692 601 751 1.94E-27 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:3.40.50.740 100 175 2.4E-54 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:3.40.50.740 361 563 2.4E-54 T 22-04-2016 SAMA_RS16555 dc7de315da99af69b233349eb81025e8 760 Gene3D G3DSA:3.40.50.740 601 613 2.4E-54 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SUPERFAMILY SSF52113 604 680 4.25E-18 T 22-04-2016 IPR001357 BRCT domain SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:1.10.287.610 12 77 6.8E-30 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:1.10.150.20 447 514 8.5E-28 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SUPERFAMILY SSF56091 11 330 2.16E-117 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 PIRSF PIRSF001604 8 680 2.0E-249 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:2.40.50.140 331 403 1.1E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:3.40.50.10190 605 679 2.9E-24 T 22-04-2016 IPR001357 BRCT domain SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00532 13 460 1.3E-266 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 446 3.0E-10 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 21 674 1.1E-256 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:1.10.150.20 516 596 1.4E-33 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SUPERFAMILY SSF47781 416 595 2.22E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF14520 Helix-hairpin-helix domain 460 512 2.7E-4 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Gene3D G3DSA:3.30.470.30 126 264 1.5E-47 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 410 9.6E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00292 605 680 6.2E-9 T 22-04-2016 IPR001357 BRCT domain SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Hamap MF_01588 DNA ligase [ligA]. 12 679 54.14 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 607 679 3.4E-12 T 22-04-2016 IPR001357 BRCT domain SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00278 492 511 220.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00278 458 477 220.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00278 524 543 230.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SMART SM00278 556 575 480.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF12826 Helix-hairpin-helix motif 522 585 1.9E-23 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 SUPERFAMILY SSF50249 330 411 7.37E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 PANTHER PTHR23389 12 544 1.0E-198 T 22-04-2016 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 13 330 1.0E-127 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SAMA_RS07885 77443f1315a9211e7e6ea3835c4810ec 681 PANTHER PTHR23389:SF9 12 544 1.0E-198 T 22-04-2016 SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 PANTHER PTHR16301 3 205 3.4E-48 T 22-04-2016 IPR023582 Impact family SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 Gene3D G3DSA:3.30.70.240 139 202 3.8E-17 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 203 5.6E-56 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 Gene3D G3DSA:3.30.230.30 7 130 3.6E-37 T 22-04-2016 IPR001498 Impact, N-terminal SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 SUPERFAMILY SSF54211 4 131 1.86E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 Pfam PF09186 Domain of unknown function (DUF1949) 142 197 5.6E-12 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 PANTHER PTHR16301:SF0 3 205 3.4E-48 T 22-04-2016 SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 SUPERFAMILY SSF54980 138 202 2.59E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS00160 36154f0b0e6b1d66f960cdabb8c674e7 206 Pfam PF01205 Uncharacterized protein family UPF0029 19 126 2.4E-24 T 22-04-2016 IPR001498 Impact, N-terminal SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Gene3D G3DSA:3.40.1380.10 63 191 3.0E-44 T 22-04-2016 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Gene3D G3DSA:1.10.287.80 201 234 2.5E-40 T 22-04-2016 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Gene3D G3DSA:1.10.287.80 19 60 2.5E-40 T 22-04-2016 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 SUPERFAMILY SSF52943 2 286 2.06E-97 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 2.6E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Gene3D G3DSA:1.10.287.80 235 281 8.1E-31 T 22-04-2016 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.988 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.3E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.3E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.3E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.3E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 PANTHER PTHR11693 1 286 1.4E-134 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS18950 57622359fb5ec2d8be18400eb98f30b2 286 Pfam PF00231 ATP synthase 5 285 2.3E-93 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 Gene3D G3DSA:2.30.42.10 496 572 2.3E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 SMART SM00228 487 555 0.0052 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 Pfam PF05299 M61 glycyl aminopeptidase 272 386 1.9E-44 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 SUPERFAMILY SSF50156 494 567 3.56E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 PANTHER PTHR22939 485 568 1.8E-16 T 22-04-2016 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 PIRSF PIRSF016493 1 587 8.5E-210 T 22-04-2016 IPR024191 Peptidase M61 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 PANTHER PTHR22939:SF73 485 568 1.8E-16 T 22-04-2016 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 SUPERFAMILY SSF55486 184 444 1.39E-13 T 22-04-2016 SAMA_RS07530 6b49bedfa84870a7b949aff5553c2c81 587 Pfam PF13180 PDZ domain 489 563 1.8E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 SUPERFAMILY SSF101801 42 123 4.05E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 5.6E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 44 114 2.1E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 Gene3D G3DSA:2.30.330.10 34 124 9.7E-38 T 22-04-2016 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 PANTHER PTHR22617 5 123 1.2E-33 T 22-04-2016 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 1.5E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 1.5E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 1.5E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SAMA_RS11985 387851ee8086d3fe579ee792bb65c283 124 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 1.5E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SAMA_RS19240 1394482b835e247e7fd4cded14af6a21 181 Gene3D G3DSA:2.40.160.20 10 181 3.0E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS19240 1394482b835e247e7fd4cded14af6a21 181 SUPERFAMILY SSF56925 22 181 1.91E-22 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS19240 1394482b835e247e7fd4cded14af6a21 181 Pfam PF13505 Outer membrane protein beta-barrel domain 8 181 1.0E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PIRSF PIRSF000530 1 381 2.2E-102 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 Gene3D G3DSA:3.30.70.890 209 378 1.9E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00959 Mevalonate kinase family signature 163 182 6.8E-28 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00959 Mevalonate kinase family signature 120 142 6.8E-28 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00959 Mevalonate kinase family signature 26 50 6.8E-28 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 Gene3D G3DSA:3.30.230.10 6 208 7.7E-65 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00473 Galactokinase signature 113 131 6.3E-25 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00473 Galactokinase signature 264 278 6.3E-25 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00473 Galactokinase signature 93 104 6.3E-25 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PRINTS PR00473 Galactokinase signature 28 46 6.3E-25 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 Pfam PF00288 GHMP kinases N terminal domain 115 181 3.0E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 Pfam PF08544 GHMP kinases C terminal 282 359 3.0E-4 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 TIGRFAM TIGR00131 gal_kin: galactokinase 7 379 2.0E-90 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PANTHER PTHR10457 6 381 2.4E-104 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 SUPERFAMILY SSF55060 205 379 7.2E-35 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 SUPERFAMILY SSF54211 3 203 5.46E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 Pfam PF10509 Galactokinase galactose-binding signature 11 59 9.5E-24 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS02860 036187a5b1e569b3c47baa867aaaf122 382 PANTHER PTHR10457:SF6 6 381 2.4E-104 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 170 398 3.2E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 SUPERFAMILY SSF47005 102 147 7.85E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Gene3D G3DSA:2.40.50.100 1 96 6.9E-25 T 22-04-2016 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Pfam PF00364 Biotin-requiring enzyme 4 75 1.2E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 PANTHER PTHR23151 3 400 6.9E-240 T 22-04-2016 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Pfam PF02817 e3 binding domain 109 141 1.2E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 SUPERFAMILY SSF51230 1 95 2.49E-24 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Gene3D G3DSA:4.10.320.10 109 148 5.0E-21 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 Gene3D G3DSA:3.30.559.10 162 398 1.4E-90 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 SUPERFAMILY SSF52777 171 399 1.96E-89 T 22-04-2016 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 PANTHER PTHR23151:SF47 3 400 6.9E-240 T 22-04-2016 SAMA_RS07435 d0583bfcfa28578854314f2024d94db4 400 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 399 1.9E-182 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 PANTHER PTHR34298 1 196 1.3E-64 T 22-04-2016 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 Gene3D G3DSA:1.10.10.10 5 86 6.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 SUPERFAMILY SSF46785 4 86 4.08E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 1.6E-51 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 PANTHER PTHR34298:SF2 1 196 1.3E-64 T 22-04-2016 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 176 1.0E-35 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 PIRSF PIRSF019345 1 197 1.6E-58 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 SUPERFAMILY SSF46785 88 163 3.17E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11105 aefdc44ad37464fdad0d4842276efa25 198 Gene3D G3DSA:1.10.10.10 87 163 3.7E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 SMART SM00864 13 205 2.0E-112 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.8E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.8E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.8E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.8E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.3E-44 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 SUPERFAMILY SSF52490 13 208 6.93E-71 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 SUPERFAMILY SSF55307 204 320 1.3E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PANTHER PTHR30314:SF3 1 392 8.1E-207 T 22-04-2016 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 PANTHER PTHR30314 1 392 8.1E-207 T 22-04-2016 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 Gene3D G3DSA:3.40.50.1440 14 214 2.8E-94 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 327 3.3E-136 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 Gene3D G3DSA:3.30.1330.20 215 322 4.4E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 Pfam PF12327 FtsZ family, C-terminal domain 222 316 9.3E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 359 38.139 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SAMA_RS01910 ae2b21a7d56e7933aee504dc17716f5f 394 SMART SM00865 207 325 4.4E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 SUPERFAMILY SSF63380 1 88 1.7E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 SUPERFAMILY SSF63380 93 198 1.7E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 3.8E-64 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 PANTHER PTHR21098:SF4 1 201 7.0E-101 T 22-04-2016 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 PIRSF PIRSF000498 1 202 9.1E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 Gene3D G3DSA:2.40.30.20 5 104 3.2E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 Gene3D G3DSA:2.40.30.20 105 198 1.8E-23 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 PANTHER PTHR21098 1 201 7.0E-101 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 Pfam PF00677 Lumazine binding domain 3 86 7.4E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS09195 562505818e5cf6d3c57054b48ce0d3bc 202 Pfam PF00677 Lumazine binding domain 100 184 8.9E-17 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 PIRSF PIRSF001365 1 301 1.6E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.6E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.6E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.6E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 Gene3D G3DSA:3.20.20.70 2 290 1.2E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 SMART SM01130 4 292 3.3E-98 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 SUPERFAMILY SSF51569 3 288 1.78E-86 T 22-04-2016 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 288 2.3E-63 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 288 9.7E-62 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS07960 1976e637f12b5c55fdad9dec66895ccb 304 PANTHER PTHR12128 1 304 4.4E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 SUPERFAMILY SSF53271 3 200 2.41E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.9E-68 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 Pfam PF00156 Phosphoribosyl transferase domain 43 160 1.8E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 PANTHER PTHR19278 2 213 1.2E-142 T 22-04-2016 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 PANTHER PTHR19278:SF36 2 213 1.2E-142 T 22-04-2016 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.77 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS01725 4e1dffbfb6da34088b4edba5be03003f 213 Gene3D G3DSA:3.40.50.2020 7 212 1.3E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.514 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 PANTHER PTHR11550 435 545 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 PANTHER PTHR11550 1 419 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 Pfam PF00117 Glutamine amidotransferase class-I 301 534 1.6E-60 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 SUPERFAMILY SSF52317 289 541 2.29E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 Pfam PF06418 CTP synthase N-terminus 4 266 2.4E-123 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 Gene3D G3DSA:3.40.50.300 1 280 9.0E-133 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 SUPERFAMILY SSF52540 3 269 6.38E-120 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.3E-257 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SAMA_RS05395 b7ec7e1e9e6ccbd8aad84831a8e56399 545 Gene3D G3DSA:3.40.50.880 288 541 1.5E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF49452 70 209 3.07E-31 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF81296 348 452 2.2E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 225 1092 0.0 T 22-04-2016 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 350 433 6.6E-11 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Gene3D G3DSA:3.20.20.80 593 924 1.8E-75 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Gene3D G3DSA:3.20.20.80 463 541 1.8E-75 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Gene3D G3DSA:3.20.20.80 959 984 1.8E-75 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF81296 1334 1383 2.17E-5 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF81296 215 337 3.5E-28 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357:SF99 354 537 2.7E-180 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357:SF99 591 749 2.7E-180 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357:SF99 768 938 2.7E-180 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357:SF99 252 328 2.7E-180 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357:SF99 962 1090 2.7E-180 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF81296 1112 1165 9.8E-7 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Pfam PF03714 Bacterial pullanase-associated domain 91 194 1.9E-10 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Gene3D G3DSA:2.60.40.10 348 446 2.2E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF51445 446 984 6.6E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 SUPERFAMILY SSF51011 987 1103 1.06E-35 T 22-04-2016 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 Pfam PF11852 Domain of unknown function (DUF3372) 926 1090 4.7E-61 T 22-04-2016 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357 354 537 2.7E-180 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357 591 749 2.7E-180 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357 768 938 2.7E-180 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357 252 328 2.7E-180 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS01550 b61fea18d64d173c5ce83800abc69d9a 1441 PANTHER PTHR10357 962 1090 2.7E-180 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 Gene3D G3DSA:3.30.930.10 109 462 9.5E-114 T 22-04-2016 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 466 8.2E-204 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 Pfam PF01336 OB-fold nucleic acid binding domain 21 99 1.9E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 8.4E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 Gene3D G3DSA:2.40.50.140 17 103 4.9E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 SUPERFAMILY SSF50249 16 102 5.33E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.717 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 SUPERFAMILY SSF55681 104 463 8.56E-97 T 22-04-2016 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.7E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.7E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.7E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.7E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PANTHER PTHR22594:SF6 1 180 2.7E-253 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PANTHER PTHR22594:SF6 199 465 2.7E-253 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PANTHER PTHR22594 1 180 2.7E-253 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS08790 efa4e5576b013f6d909e65929e3e72a2 466 PANTHER PTHR22594 199 465 2.7E-253 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 PANTHER PTHR11808:SF14 1 392 4.9E-200 T 22-04-2016 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 Gene3D G3DSA:3.40.640.10 6 255 3.9E-101 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 Gene3D G3DSA:3.90.1150.10 257 392 3.0E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 389 2.2E-150 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 PANTHER PTHR11808 1 392 4.9E-200 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 PIRSF PIRSF001434 1 392 5.8E-154 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS06510 ff4575e8df599bd5e4f57caf0a6aef69 392 SUPERFAMILY SSF53383 27 391 6.38E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 PANTHER PTHR11953:SF0 1 236 5.8E-87 T 22-04-2016 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 2.6E-13 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 Gene3D G3DSA:3.30.230.70 9 236 5.0E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.3E-114 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 SUPERFAMILY SSF54211 1 181 8.6E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 SUPERFAMILY SSF55666 153 236 6.28E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.281 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 PANTHER PTHR11953 1 236 5.8E-87 T 22-04-2016 SAMA_RS01720 30a106794dc2b2b2ebbf7d5a277a52c4 237 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 1.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 Gene3D G3DSA:3.90.180.10 7 148 6.1E-45 T 22-04-2016 IPR011032 GroES-like SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 Pfam PF00107 Zinc-binding dehydrogenase 155 270 4.2E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 SUPERFAMILY SSF50129 8 144 2.36E-33 T 22-04-2016 IPR011032 GroES-like SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 SMART SM00829 14 327 3.4E-50 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 Gene3D G3DSA:3.40.50.720 149 266 1.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 PANTHER PTHR11695 19 330 1.3E-112 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 91 5.3E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 PANTHER PTHR11695:SF28 19 330 1.3E-112 T 22-04-2016 SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 328 3.5E-131 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SAMA_RS02845 cf7660e88f2a0194e60ce34342c208a4 333 SUPERFAMILY SSF51735 116 291 7.25E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 Gene3D G3DSA:3.40.630.10 111 391 4.0E-61 T 22-04-2016 SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 PANTHER PTHR12147 100 392 1.1E-72 T 22-04-2016 SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 SMART SM00089 504 592 3.5E-16 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 Gene3D G3DSA:2.60.40.670 510 595 3.2E-22 T 22-04-2016 IPR000601 PKD domain SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 Pfam PF04389 Peptidase family M28 184 377 7.5E-38 T 22-04-2016 IPR007484 Peptidase M28 SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 SUPERFAMILY SSF53187 112 391 1.37E-64 T 22-04-2016 SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 422 487 5.4E-7 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 SUPERFAMILY SSF49299 478 593 1.11E-23 T 22-04-2016 IPR000601 PKD domain SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 PANTHER PTHR12147:SF21 100 392 1.1E-72 T 22-04-2016 SAMA_RS17765 f56d4f8d785637e738e84223efd3e5ed 677 Pfam PF00801 PKD domain 519 581 5.5E-14 T 22-04-2016 IPR000601 PKD domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00091 773 845 0.31 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00091 642 713 0.0058 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00091 391 459 16.0 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00091 512 578 1.4E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00091 901 966 8.0E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF08447 PAS fold 668 753 2.3E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF08447 PAS fold 925 1006 3.2E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF52172 1278 1398 1.42E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1148 1261 8.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF02743 Cache domain 94 292 4.9E-13 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55785 405 507 1.96E-10 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423 322 776 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423 1320 1537 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423 899 1267 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:1.20.120.160 1566 1673 9.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.40.50.2300 1417 1537 5.8E-40 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:1.10.287.130 1030 1097 6.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423:SF486 322 776 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423:SF486 1320 1537 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PANTHER PTHR24423:SF486 899 1267 2.1E-237 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF00672 HAMP domain 312 379 1.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 886 1014 1.7E-23 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 759 885 4.9E-11 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 380 505 1.1E-9 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00388 1036 1101 2.5E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF47226 1564 1673 2.75E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00448 1420 1533 1.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00448 1279 1390 2.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 168 301 4.1E-9 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00387 1148 1264 1.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 633 758 2.8E-26 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF52172 1417 1537 6.55E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00086 719 761 9.5E-8 T 22-04-2016 IPR001610 PAC motif SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00086 974 1016 0.23 T 22-04-2016 IPR001610 PAC motif SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00086 465 507 5.0 T 22-04-2016 IPR001610 PAC motif SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SMART SM00086 849 889 490.0 T 22-04-2016 IPR001610 PAC motif SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 507 1.4E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 638 767 7.5E-14 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 515 636 2.3E-16 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 898 1020 8.7E-18 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF13426 PAS domain 409 506 4.7E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF13426 PAS domain 522 629 1.2E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF47384 1019 1102 4.9E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF01627 Hpt domain 1588 1666 8.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.565.10 1102 1268 9.4E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1207 1217 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1248 1261 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1189 1203 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1224 1242 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF00072 Response regulator receiver domain 1281 1388 2.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF00072 Response regulator receiver domain 1422 1531 1.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.30.450.20 515 628 3.3E-15 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55785 886 1014 7.63E-23 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55785 758 887 2.09E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1036 1101 1.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55785 628 759 2.62E-20 T 22-04-2016 IPR000014 PAS domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 Gene3D G3DSA:3.40.50.2300 1275 1408 7.4E-35 T 22-04-2016 SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55874 1090 1261 9.82E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15410 455ed5472876c8743ca0060287e050e6 1763 SUPERFAMILY SSF55785 523 639 5.89E-17 T 22-04-2016 IPR000014 PAS domain SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 17 371 2.7E-153 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 Gene3D G3DSA:2.30.30.280 224 291 1.8E-33 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 Pfam PF03054 tRNA methyl transferase 17 371 3.1E-142 T 22-04-2016 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 17 372 40.404 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 PANTHER PTHR11933 11 377 7.5E-217 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 SUPERFAMILY SSF52402 15 255 2.65E-56 T 22-04-2016 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 Gene3D G3DSA:3.40.50.620 14 222 1.2E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 PANTHER PTHR11933:SF10 11 377 7.5E-217 T 22-04-2016 SAMA_RS10750 3f8862d0b3cb1c0f1673c98f6d97c633 377 Gene3D G3DSA:2.40.30.10 293 375 7.0E-31 T 22-04-2016 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 Pfam PF00871 Acetokinase family 6 391 1.0E-164 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 Gene3D G3DSA:3.30.420.40 5 205 1.0E-13 T 22-04-2016 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PANTHER PTHR21060:SF15 2 398 3.5E-266 T 22-04-2016 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 SUPERFAMILY SSF53067 5 197 6.48E-67 T 22-04-2016 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 204 225 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 323 339 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 301 314 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 378 390 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 6 17 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PRINTS PR00471 Acetate kinase family signature 174 187 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PIRSF PIRSF000722 2 399 6.8E-146 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 397 2.0E-165 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 PANTHER PTHR21060 2 398 3.5E-266 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 SUPERFAMILY SSF53067 158 398 2.68E-89 T 22-04-2016 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 192.341 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SAMA_RS07780 ea7899c25bd162f6ced8ca700cfe28fd 399 Gene3D G3DSA:3.30.420.40 206 396 3.6E-77 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184 102 141 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184 1 51 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184 160 416 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 248.148 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.1E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Gene3D G3DSA:1.10.720.10 1 47 6.4E-22 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SUPERFAMILY SSF50249 48 125 7.71E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Gene3D G3DSA:3.40.50.300 132 418 1.8E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SMART SM00959 5 47 4.9E-19 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SMART SM00357 52 118 1.0E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SUPERFAMILY SSF52540 90 370 1.32E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.2E-215 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SMART SM00382 170 355 4.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 9.1E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184:SF34 102 141 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184:SF34 1 51 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 PANTHER PTHR15184:SF34 160 416 1.1E-194 T 22-04-2016 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Gene3D G3DSA:2.40.50.140 49 117 1.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 SUPERFAMILY SSF68912 1 46 1.06E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SAMA_RS16755 c50e55b0c777e6dba48f80a27e0040d1 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.1E-21 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PIRSF PIRSF000109 2 509 4.2E-175 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 SMART SM01350 211 502 6.0E-196 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 Gene3D G3DSA:1.20.5.320 468 508 3.2E-18 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PANTHER PTHR11811 9 509 1.1E-239 T 22-04-2016 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PANTHER PTHR11811:SF25 9 509 1.1E-239 T 22-04-2016 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 197 502 5.9E-130 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 286 298 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 Gene3D G3DSA:3.40.50.720 3 212 2.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 211 501 2.4E-121 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 SUPERFAMILY SSF51735 8 180 2.77E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 282 309 3.1E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 8 31 3.1E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 389 411 3.1E-35 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 182 6.5E-34 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 SUPERFAMILY SSF48179 209 503 6.8E-116 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS07120 925352e9052578d67fbf8235efffde2e 511 Gene3D G3DSA:1.10.1040.10 213 466 1.1E-106 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147 232 470 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147 31 200 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147 486 539 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 Gene3D G3DSA:3.40.630.10 21 88 2.7E-58 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 Gene3D G3DSA:3.40.630.10 290 527 2.7E-58 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 Pfam PF02225 PA domain 127 209 4.5E-6 T 22-04-2016 IPR003137 PA domain SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 SUPERFAMILY SSF52025 126 209 1.28E-8 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 Gene3D G3DSA:3.50.30.30 126 208 3.0E-4 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147:SF20 232 470 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147:SF20 31 200 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 PANTHER PTHR12147:SF20 486 539 7.5E-197 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 Pfam PF04389 Peptidase family M28 293 513 9.5E-48 T 22-04-2016 IPR007484 Peptidase M28 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 SUPERFAMILY SSF53187 277 524 7.22E-64 T 22-04-2016 SAMA_RS10980 feb822af3175e9f8ddbc2af3fdb973da 542 SUPERFAMILY SSF53187 28 76 7.22E-64 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 SMART SM00283 444 705 2.0E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Pfam PF00672 HAMP domain 356 425 3.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Gene3D G3DSA:1.10.287.950 459 675 1.3E-51 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 6.46E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 571 600 6.46E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 SUPERFAMILY SSF58104 397 705 5.1E-68 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 SMART SM00304 375 429 8.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 PANTHER PTHR32089 176 706 1.4E-155 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Gene3D G3DSA:3.30.450.20 95 128 5.3E-12 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Gene3D G3DSA:3.30.450.20 168 234 5.3E-12 T 22-04-2016 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 693 2.2E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 Pfam PF02743 Cache domain 49 326 1.1E-20 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS13805 d123902dec8355133ee8a79f05706fbb 706 PANTHER PTHR32089:SF64 176 706 1.4E-155 T 22-04-2016 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 PANTHER PTHR11609:SF1 34 367 2.1E-76 T 22-04-2016 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 Pfam PF01259 SAICAR synthetase 22 294 1.6E-48 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 PANTHER PTHR11609 34 367 2.1E-76 T 22-04-2016 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 Gene3D G3DSA:3.30.200.20 13 135 4.2E-33 T 22-04-2016 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 SUPERFAMILY SSF56104 13 344 9.48E-68 T 22-04-2016 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 Gene3D G3DSA:3.30.470.20 136 282 1.0E-41 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.697 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SAMA_RS02635 f0a84580af396cad0254373b9cf68127 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 4.9E-209 T 22-04-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 SUPERFAMILY SSF88659 459 532 8.18E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 619 47.37 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 3.5E-37 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF04545 Sigma-70, region 4 554 607 9.0E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PANTHER PTHR30603 333 619 9.6E-249 T 22-04-2016 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PANTHER PTHR30603 4 153 9.6E-249 T 22-04-2016 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 SUPERFAMILY SSF88946 116 453 8.63E-100 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Gene3D G3DSA:1.10.601.10 113 455 7.1E-134 T 22-04-2016 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF03979 Sigma-70 factor, region 1.1 8 84 1.2E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.4E-121 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 6.7E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 6.7E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 6.7E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 6.7E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 6.7E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PANTHER PTHR30603:SF0 333 619 9.6E-249 T 22-04-2016 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 PANTHER PTHR30603:SF0 4 153 9.6E-249 T 22-04-2016 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Gene3D G3DSA:1.10.10.10 459 510 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 SUPERFAMILY SSF88659 516 618 7.41E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF04539 Sigma-70 region 3 465 540 2.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF00140 Sigma-70 factor, region 1.2 99 129 3.7E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Pfam PF04546 Sigma-70, non-essential region 140 355 7.6E-71 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04315 43d20d6b100a0a0ebeff33ee582f40dc 620 Gene3D G3DSA:1.10.10.10 549 619 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Gene3D G3DSA:1.10.10.60 374 448 1.5E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 1.5E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Gene3D G3DSA:1.10.8.60 323 373 6.8E-19 T 22-04-2016 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 SMART SM00382 170 313 6.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 SUPERFAMILY SSF52172 8 195 3.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Gene3D G3DSA:3.40.50.300 149 322 4.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 PANTHER PTHR32071 8 459 2.2E-270 T 22-04-2016 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 SMART SM00448 9 120 2.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 PANTHER PTHR32071:SF11 8 459 2.2E-270 T 22-04-2016 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Pfam PF00158 Sigma-54 interaction domain 150 316 2.0E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Pfam PF00072 Response regulator receiver domain 11 120 2.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 SUPERFAMILY SSF52540 150 381 7.87E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 Gene3D G3DSA:3.40.50.2300 9 141 1.4E-34 T 22-04-2016 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 SUPERFAMILY SSF46689 361 449 7.17E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11610 91e0ddab71cbc310b8e5cff3f9774ea2 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS08915 459bf8cdd77eadcfb80bc4dba8713293 392 SUPERFAMILY SSF52518 23 386 4.57E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS08915 459bf8cdd77eadcfb80bc4dba8713293 392 Gene3D G3DSA:3.40.50.970 7 372 4.2E-146 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS08915 459bf8cdd77eadcfb80bc4dba8713293 392 Pfam PF00676 Dehydrogenase E1 component 56 351 3.0E-93 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SAMA_RS08915 459bf8cdd77eadcfb80bc4dba8713293 392 PANTHER PTHR11516 9 392 2.5E-205 T 22-04-2016 SAMA_RS08915 459bf8cdd77eadcfb80bc4dba8713293 392 PANTHER PTHR11516:SF1 9 392 2.5E-205 T 22-04-2016 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 Gene3D G3DSA:3.75.10.20 1 444 3.5E-227 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 PANTHER PTHR30420:SF2 2 444 1.7E-301 T 22-04-2016 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 Pfam PF04996 Succinylarginine dihydrolase 3 443 4.2E-227 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 PANTHER PTHR30420 2 444 1.7E-301 T 22-04-2016 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 444 60.123 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 443 4.2E-228 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SAMA_RS06900 5fa5b52795ba5d69cb06c58cf2e0d79b 444 SUPERFAMILY SSF55909 3 444 5.69E-210 T 22-04-2016 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PANTHER PTHR10992 19 296 2.2E-76 T 22-04-2016 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 SUPERFAMILY SSF53474 6 295 7.09E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PANTHER PTHR10992:SF773 19 296 2.2E-76 T 22-04-2016 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 7.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 7.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.4E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 Gene3D G3DSA:3.40.50.1820 7 295 2.4E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 Pfam PF12697 Alpha/beta hydrolase family 37 288 1.4E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00412 Epoxide hydrolase signature 238 254 9.2E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00412 Epoxide hydrolase signature 108 121 9.2E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00412 Epoxide hydrolase signature 271 293 9.2E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00412 Epoxide hydrolase signature 41 59 9.2E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS06200 cca718f35a643c7729bccc1216a40db0 305 PRINTS PR00412 Epoxide hydrolase signature 122 135 9.2E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS17385 1ec89b06c13f570f3ef4e286064290af 167 SUPERFAMILY SSF55729 2 161 2.13E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17385 1ec89b06c13f570f3ef4e286064290af 167 Gene3D G3DSA:3.40.630.30 2 162 7.9E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17385 1ec89b06c13f570f3ef4e286064290af 167 Pfam PF13302 Acetyltransferase (GNAT) domain 3 137 1.1E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS17385 1ec89b06c13f570f3ef4e286064290af 167 PANTHER PTHR13256:SF24 1 159 2.9E-51 T 22-04-2016 SAMA_RS17385 1ec89b06c13f570f3ef4e286064290af 167 PANTHER PTHR13256 1 159 2.9E-51 T 22-04-2016 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 Gene3D G3DSA:3.30.1070.10 34 84 5.0E-23 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 Pfam PF03776 Septum formation topological specificity factor MinE 15 83 1.6E-26 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 SUPERFAMILY SSF55229 34 84 5.62E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.3E-30 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 20.249 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SAMA_RS10105 96e527a71eba497a12d63cfbc2c6d699 85 PANTHER PTHR33404 1 84 7.6E-28 T 22-04-2016 SAMA_RS15110 74f264b382ac166abdd709fead2e071f 547 Pfam PF03572 Peptidase family S41 265 442 1.5E-7 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS15110 74f264b382ac166abdd709fead2e071f 547 Gene3D G3DSA:3.90.226.10 263 453 1.8E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS15110 74f264b382ac166abdd709fead2e071f 547 SUPERFAMILY SSF52096 73 146 2.32E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS15110 74f264b382ac166abdd709fead2e071f 547 SUPERFAMILY SSF52096 244 330 2.32E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS15110 74f264b382ac166abdd709fead2e071f 547 SUPERFAMILY SSF52096 362 451 2.32E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS12145 5ee3561a111eb1d279c64d9f595878da 235 PANTHER PTHR36307 5 235 2.2E-40 T 22-04-2016 SAMA_RS12145 5ee3561a111eb1d279c64d9f595878da 235 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 234 1.9E-37 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SAMA_RS12145 5ee3561a111eb1d279c64d9f595878da 235 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 233 2.3E-54 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SAMA_RS12145 5ee3561a111eb1d279c64d9f595878da 235 SMART SM00858 113 175 2.5E-8 T 22-04-2016 IPR013974 SAF domain SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 4.3E-26 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 PANTHER PTHR20941 1 115 7.8E-27 T 22-04-2016 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 Pfam PF02152 Dihydroneopterin aldolase 5 113 9.0E-30 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 5.4E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 SMART SM00905 4 114 1.3E-43 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 Gene3D G3DSA:3.30.1130.10 1 115 2.3E-38 T 22-04-2016 SAMA_RS04345 84d4a6d0ab0c888b156e7da57ed7927a 119 SUPERFAMILY SSF55620 1 115 1.06E-33 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 398 414 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 258 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 437 458 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 211 233 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 331 343 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 346 370 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 263 273 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 471 489 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 309 317 2.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Gene3D G3DSA:3.40.30.10 1 91 4.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 SUPERFAMILY SSF52833 1 98 2.12E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 210 497 5.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 SUPERFAMILY SSF52833 104 193 1.9E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Gene3D G3DSA:3.40.30.10 100 193 4.4E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PANTHER PTHR22912:SF107 196 507 7.9E-202 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Pfam PF13192 Thioredoxin domain 122 191 1.8E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PIRSF PIRSF000238 1 514 1.7E-257 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 338 358 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Gene3D G3DSA:3.50.50.60 432 510 4.8E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Gene3D G3DSA:3.50.50.60 326 431 7.3E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 SUPERFAMILY SSF51905 196 507 4.75E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 511 1.3E-243 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 435 451 3.4E-39 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 212 231 3.4E-39 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 368 3.4E-39 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 308 326 3.4E-39 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 483 3.4E-39 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 PANTHER PTHR22912 196 507 7.9E-202 T 22-04-2016 SAMA_RS03285 48cf2952c8b8a11350cc84d7648026fd 520 Gene3D G3DSA:3.50.50.60 207 325 1.0E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 PANTHER PTHR23514:SF7 17 405 1.5E-117 T 22-04-2016 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 Pfam PF07690 Major Facilitator Superfamily 30 357 1.3E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 PANTHER PTHR23514 17 405 1.5E-117 T 22-04-2016 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 403 1.0E-127 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 Gene3D G3DSA:1.20.1250.20 229 398 1.5E-8 T 22-04-2016 SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 SUPERFAMILY SSF103473 21 402 1.96E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS07310 4369590470f75478d740eec7ff8e034b 415 Gene3D G3DSA:1.20.1250.20 26 220 1.5E-19 T 22-04-2016 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 Gene3D G3DSA:3.90.25.10 180 231 5.3E-55 T 22-04-2016 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 Gene3D G3DSA:3.90.25.10 263 336 5.3E-55 T 22-04-2016 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 PANTHER PTHR10366:SF39 2 336 1.2E-158 T 22-04-2016 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 SUPERFAMILY SSF51735 1 335 2.12E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 7.9E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 7.9E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 7.9E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 PANTHER PTHR10366 2 336 1.2E-158 T 22-04-2016 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 1.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 6.3E-143 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SAMA_RS11665 4b4f30d670e15a155772811de9f7f171 336 Gene3D G3DSA:3.40.50.720 1 179 1.5E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02800 f65fa27eea5b090a76db470356e9992f 388 Gene3D G3DSA:1.20.1250.20 12 192 1.2E-18 T 22-04-2016 SAMA_RS02800 f65fa27eea5b090a76db470356e9992f 388 Pfam PF07690 Major Facilitator Superfamily 14 341 4.7E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS02800 f65fa27eea5b090a76db470356e9992f 388 SUPERFAMILY SSF103473 7 382 1.57E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02800 f65fa27eea5b090a76db470356e9992f 388 Gene3D G3DSA:1.20.1250.20 216 387 4.8E-6 T 22-04-2016 SAMA_RS06580 ee497fd8f7d665d5af4d82c9e7833d5b 174 PANTHER PTHR30625 74 161 9.9E-20 T 22-04-2016 SAMA_RS06580 ee497fd8f7d665d5af4d82c9e7833d5b 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 166 2.1E-21 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SAMA_RS06580 ee497fd8f7d665d5af4d82c9e7833d5b 174 PANTHER PTHR30625:SF0 74 161 9.9E-20 T 22-04-2016 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 PANTHER PTHR23151 1 140 2.1E-36 T 22-04-2016 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 66 79 9.8E-15 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 97 9.8E-15 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 111 9.8E-15 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 93 110 - T 22-04-2016 IPR001882 Biotin-binding site SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 Pfam PF00364 Biotin-requiring enzyme 64 136 1.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 Gene3D G3DSA:2.40.50.100 61 136 1.1E-29 T 22-04-2016 SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 SUPERFAMILY SSF51230 62 136 7.46E-24 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS16645 7ca77b8d1d8b426f501fed9f6bf9939a 140 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 50 136 3.5E-38 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SAMA_RS07565 142004d302cd00f6ebf846e0dea5231c 215 Pfam PF04973 Nicotinamide mononucleotide transporter 25 200 7.8E-47 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SAMA_RS07565 142004d302cd00f6ebf846e0dea5231c 215 PANTHER PTHR36122 1 213 3.2E-81 T 22-04-2016 SAMA_RS07565 142004d302cd00f6ebf846e0dea5231c 215 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 29 203 2.4E-18 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SAMA_RS07565 142004d302cd00f6ebf846e0dea5231c 215 PANTHER PTHR36122:SF1 1 213 3.2E-81 T 22-04-2016 SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 SMART SM00487 20 214 3.1E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 Pfam PF00270 DEAD/DEAH box helicase 25 186 1.2E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 SMART SM00490 254 335 2.9E-23 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 PANTHER PTHR24031 1 446 5.6E-135 T 22-04-2016 SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 SUPERFAMILY SSF52540 1 201 2.05E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 Gene3D G3DSA:3.40.50.300 1 214 5.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 SUPERFAMILY SSF52540 253 359 8.76E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 SUPERFAMILY SSF52540 38 96 8.76E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 Gene3D G3DSA:3.40.50.300 215 356 1.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 PANTHER PTHR24031:SF0 1 446 5.6E-135 T 22-04-2016 SAMA_RS12780 49fe0fa3ed0ae18a6d70bd1f33713cff 447 Pfam PF00271 Helicase conserved C-terminal domain 233 335 4.9E-21 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Gene3D G3DSA:3.90.980.10 113 238 3.4E-45 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SMART SM00766 448 569 4.1E-31 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Hamap MF_00974 DNA primase [dnaG]. 2 570 29.19 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Pfam PF08278 DNA primase DnaG DnaB-binding 450 568 5.4E-27 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SMART SM00493 257 328 5.8E-21 T 22-04-2016 IPR006171 Toprim domain SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 1.2E-142 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SMART SM00400 34 88 8.8E-37 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Gene3D G3DSA:3.90.580.10 3 99 1.1E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 PANTHER PTHR30313 1 572 1.9E-151 T 22-04-2016 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Gene3D G3DSA:1.10.860.10 439 572 1.8E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SUPERFAMILY SSF117023 446 572 1.31E-36 T 22-04-2016 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Gene3D G3DSA:1.20.50.20 366 417 2.0E-5 T 22-04-2016 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Pfam PF10410 DnaB-helicase binding domain of primase 368 416 8.2E-5 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Gene3D G3DSA:3.40.1360.10 239 364 3.3E-45 T 22-04-2016 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 249 1.4E-40 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Pfam PF13662 Toprim domain 258 336 1.1E-15 T 22-04-2016 IPR006171 Toprim domain SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 PIRSF PIRSF002811 1 574 6.9E-144 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SUPERFAMILY SSF57783 3 98 2.04E-37 T 22-04-2016 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 Pfam PF01807 CHC2 zinc finger 4 99 1.3E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SAMA_RS04320 750c242f84e4de6cc8681cc3026c1a60 576 SUPERFAMILY SSF56731 113 417 4.58E-106 T 22-04-2016 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 246 5.0E-65 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 Gene3D G3DSA:3.20.20.70 4 257 5.6E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 257 40.494 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 Pfam PF00121 Triosephosphate isomerase 7 253 8.1E-94 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 PANTHER PTHR21139 1 260 1.7E-118 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 SUPERFAMILY SSF51351 3 257 9.16E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS05000 bad7481d7d6a30d6b8cca29d842b4dae 260 ProSitePatterns PS00171 Triosephosphate isomerase active site. 173 183 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SAMA_RS00715 c6b727e645204ba2206565ad4fd549ac 175 PANTHER PTHR11431 6 158 6.6E-50 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS00715 c6b727e645204ba2206565ad4fd549ac 175 SUPERFAMILY SSF47240 1 159 9.84E-58 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS00715 c6b727e645204ba2206565ad4fd549ac 175 Pfam PF00210 Ferritin-like domain 7 143 2.9E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SAMA_RS00715 c6b727e645204ba2206565ad4fd549ac 175 Gene3D G3DSA:1.20.1260.10 1 161 2.0E-60 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS10240 47571e887fb495e02e1ff35aa277ee5f 191 SUPERFAMILY SSF101874 20 190 1.57E-24 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS10240 47571e887fb495e02e1ff35aa277ee5f 191 PIRSF PIRSF029811 1 191 6.8E-80 T 22-04-2016 IPR027016 Uncharacterised protein with YceI domain SAMA_RS10240 47571e887fb495e02e1ff35aa277ee5f 191 Pfam PF04264 YceI-like domain 22 188 3.0E-15 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS10240 47571e887fb495e02e1ff35aa277ee5f 191 Gene3D G3DSA:2.40.128.110 20 190 5.0E-14 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS10240 47571e887fb495e02e1ff35aa277ee5f 191 SMART SM00867 21 190 4.8E-22 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 6.1E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.30.56.10 155 184 3.5E-26 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.30.56.10 1 38 3.5E-26 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SUPERFAMILY SSF56037 196 396 4.71E-76 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Pfam PF01588 Putative tRNA binding domain 46 145 6.6E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SUPERFAMILY SSF55681 467 690 9.94E-52 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.586 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SUPERFAMILY SSF50249 35 194 3.71E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Pfam PF03483 B3/4 domain 212 385 2.0E-70 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SUPERFAMILY SSF54991 698 794 3.01E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.30.930.10 495 691 3.4E-66 T 22-04-2016 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SMART SM00874 403 471 5.2E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.50.40.10 198 392 4.3E-82 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SMART SM00896 701 794 3.4E-47 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.30.56.20 402 475 5.3E-26 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.7E-274 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SUPERFAMILY SSF46955 404 475 1.92E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:2.40.50.140 42 154 4.2E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 SMART SM00873 212 385 7.5E-99 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Gene3D G3DSA:3.30.70.380 703 794 9.8E-33 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SAMA_RS10205 d0896f118570a984f3f4db72a8928b09 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.1E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 281 9.1E-119 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 281 44.936 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 Pfam PF00551 Formyl transferase 86 263 8.3E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 SUPERFAMILY SSF53328 86 281 1.83E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 SUPERFAMILY SSF55021 7 68 8.33E-8 T 22-04-2016 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 Gene3D G3DSA:3.30.70.260 6 68 1.4E-10 T 22-04-2016 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PANTHER PTHR10520:SF7 4 275 6.6E-131 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 Gene3D G3DSA:3.40.50.170 86 280 4.3E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 3.9E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PANTHER PTHR10520 4 275 6.6E-131 T 22-04-2016 SAMA_RS05945 8f5e793aec343ad854df93a93affce42 281 PIRSF PIRSF036480 5 281 3.3E-109 T 22-04-2016 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 Gene3D G3DSA:3.40.50.300 251 461 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SMART SM00670 7 144 4.2E-11 T 22-04-2016 IPR002716 PIN domain SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SUPERFAMILY SSF88723 107 164 1.03E-16 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SUPERFAMILY SSF88723 7 68 1.03E-16 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 Gene3D G3DSA:3.40.50.1010 107 154 4.0E-15 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 Gene3D G3DSA:3.40.50.1010 9 67 4.0E-15 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 Pfam PF02562 PhoH-like protein 253 457 8.2E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 PANTHER PTHR30473:SF2 207 463 1.4E-198 T 22-04-2016 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 PANTHER PTHR30473:SF2 6 185 1.4E-198 T 22-04-2016 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 PANTHER PTHR30473 207 463 1.4E-198 T 22-04-2016 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 PANTHER PTHR30473 6 185 1.4E-198 T 22-04-2016 SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 Pfam PF13638 PIN domain 9 153 6.3E-36 T 22-04-2016 IPR002716 PIN domain SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SUPERFAMILY SSF52540 252 442 2.35E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SUPERFAMILY SSF52540 155 206 2.35E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16325 d562a396cc0bb12ea4ad154646caf9d0 463 SMART SM00382 271 437 7.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14565 636a30c09a634e5d968ce307f3458c67 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 44 1.3E-6 T 22-04-2016 SAMA_RS14565 636a30c09a634e5d968ce307f3458c67 208 Gene3D G3DSA:1.10.10.10 5 80 1.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14565 636a30c09a634e5d968ce307f3458c67 208 PANTHER PTHR30363 1 208 5.4E-83 T 22-04-2016 SAMA_RS14565 636a30c09a634e5d968ce307f3458c67 208 SUPERFAMILY SSF46785 3 183 2.12E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14565 636a30c09a634e5d968ce307f3458c67 208 PANTHER PTHR30363:SF9 1 208 5.4E-83 T 22-04-2016 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 168 193 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 SMART SM01002 144 310 1.9E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 SUPERFAMILY SSF51735 136 316 3.41E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 PANTHER PTHR10160 1 507 1.1E-303 T 22-04-2016 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 367 2.3E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 2.7E-49 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Gene3D G3DSA:3.50.50.60 168 197 3.0E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 424 507 1.3E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 SUPERFAMILY SSF52283 1 166 6.12E-55 T 22-04-2016 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 SMART SM01003 4 135 4.2E-74 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 507 3.4E-269 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Gene3D G3DSA:3.40.50.1770 198 369 1.2E-43 T 22-04-2016 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 PIRSF PIRSF000203 1 507 4.9E-263 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 SAMA_RS14835 912a2a289048d4269ddbf89df6ae8181 508 Gene3D G3DSA:3.40.50.1770 1 167 3.6E-67 T 22-04-2016 SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 SMART SM00650 25 197 4.7E-76 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 9.7E-72 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.576 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 PANTHER PTHR11727 8 265 5.6E-89 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 Gene3D G3DSA:1.10.8.100 202 265 5.1E-22 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 Gene3D G3DSA:3.40.50.150 8 197 4.9E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.1E-84 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SAMA_RS14730 b99b809e1ea719bd43f9293dd277c37b 267 SUPERFAMILY SSF53335 8 264 1.55E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12285 c40f65f464a8df91433110ac7329e268 379 PANTHER PTHR30365:SF6 1 379 2.9E-191 T 22-04-2016 SAMA_RS12285 c40f65f464a8df91433110ac7329e268 379 PANTHER PTHR30365 1 379 2.9E-191 T 22-04-2016 SAMA_RS12285 c40f65f464a8df91433110ac7329e268 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.2E-110 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SAMA_RS12285 c40f65f464a8df91433110ac7329e268 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 8.6E-175 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SAMA_RS12285 c40f65f464a8df91433110ac7329e268 379 PIRSF PIRSF000267 2 378 2.5E-128 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 PANTHER PTHR11662 17 444 2.3E-83 T 22-04-2016 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 Pfam PF07690 Major Facilitator Superfamily 37 392 9.1E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 PIRSF PIRSF002808 10 444 4.0E-99 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 SUPERFAMILY SSF103473 12 437 1.31E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 Gene3D G3DSA:1.20.1250.20 20 211 2.1E-39 T 22-04-2016 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 Gene3D G3DSA:1.20.1250.20 244 436 2.5E-27 T 22-04-2016 SAMA_RS16870 ad5181ec411bdbde0064c73af16fe0d9 445 PANTHER PTHR11662:SF195 17 444 2.3E-83 T 22-04-2016 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Pfam PF00271 Helicase conserved C-terminal domain 224 330 6.2E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Gene3D G3DSA:3.40.50.300 221 343 3.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Gene3D G3DSA:1.10.10.10 344 513 1.1E-58 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SMART SM00490 249 330 1.3E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Pfam PF16124 RecQ zinc-binding 342 402 1.3E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Pfam PF00570 HRDC domain 534 600 6.3E-21 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SMART SM00341 530 607 2.1E-18 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Gene3D G3DSA:1.25.10.10 188 220 4.4E-4 T 22-04-2016 IPR011989 Armadillo-like helical SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SUPERFAMILY SSF52540 9 197 1.05E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SUPERFAMILY SSF47819 530 604 7.66E-25 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SMART SM00487 22 217 2.8E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SMART SM00956 410 513 3.5E-50 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 15 602 4.0E-242 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Gene3D G3DSA:1.10.150.80 531 604 4.4E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 SUPERFAMILY SSF52540 207 455 1.81E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 PANTHER PTHR13710:SF81 6 604 5.9E-295 T 22-04-2016 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Pfam PF00270 DEAD/DEAH box helicase 28 186 2.4E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 16 463 1.4E-181 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Gene3D G3DSA:3.40.50.300 9 187 5.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 PANTHER PTHR13710 6 604 5.9E-295 T 22-04-2016 SAMA_RS01785 d9b95be59672b173dd91a2f0dda8a05e 607 Pfam PF09382 RQC domain 405 513 5.4E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 PANTHER PTHR10799:SF750 270 414 4.9E-47 T 22-04-2016 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 PANTHER PTHR10799:SF750 486 617 4.9E-47 T 22-04-2016 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 SUPERFAMILY SSF55073 458 617 7.46E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 Gene3D G3DSA:3.30.70.270 455 618 5.0E-56 T 22-04-2016 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 450 614 9.0E-53 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 454 612 1.0E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 Pfam PF07695 7TM diverse intracellular signalling 181 383 9.0E-32 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 Pfam PF07696 7TMR-DISM extracellular 2 61 169 1.6E-16 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 SMART SM00267 442 616 1.5E-65 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 PANTHER PTHR10799 270 414 4.9E-47 T 22-04-2016 SAMA_RS16720 36d0f157f0fe96563770ba9d8683b0e8 624 PANTHER PTHR10799 486 617 4.9E-47 T 22-04-2016 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 PIRSF PIRSF006102 1 208 3.1E-67 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 205 35.87 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 PANTHER PTHR30586 1 207 2.5E-141 T 22-04-2016 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 193 2.5E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 PANTHER PTHR30586:SF1 1 207 2.5E-141 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS13230 8d6e28daaf870448f8ec9a08086a4690 208 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 205 1.3E-101 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 SMART SM00448 5 115 5.3E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 PANTHER PTHR26402 5 133 1.4E-38 T 22-04-2016 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 PANTHER PTHR26402 298 315 1.4E-38 T 22-04-2016 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 Gene3D G3DSA:3.40.50.2300 2 127 4.8E-36 T 22-04-2016 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 PANTHER PTHR26402:SF495 5 133 1.4E-38 T 22-04-2016 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 PANTHER PTHR26402:SF495 298 315 1.4E-38 T 22-04-2016 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 Pfam PF00072 Response regulator receiver domain 8 115 4.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18675 b73c4a6179bae62c5231e12add8e2fa5 376 SUPERFAMILY SSF52172 4 136 2.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PANTHER PTHR11528:SF44 5 637 0.0 T 22-04-2016 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 Gene3D G3DSA:3.30.565.10 5 246 5.4E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 190 208 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 26 48 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 172 189 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 120 142 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 93 110 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 75 92 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PRINTS PR00775 90kDa heat shock protein signature 5 25 4.5E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 SMART SM00387 27 184 9.5E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PIRSF PIRSF002583 1 637 3.9E-222 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 SUPERFAMILY SSF55874 4 214 6.29E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 PANTHER PTHR11528 5 637 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 633 32.691 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 SUPERFAMILY SSF110942 520 633 4.84E-36 T 22-04-2016 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 Pfam PF00183 Hsp90 protein 221 636 3.1E-131 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 SUPERFAMILY SSF54211 239 494 5.54E-99 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS06860 b18951a377a2e945ff4e5ee2d4dae538 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 183 2.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.702 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 SUPERFAMILY SSF63411 4 162 3.94E-66 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 1.3E-60 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 Gene3D G3DSA:3.30.1360.80 1 168 3.9E-73 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.3E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.3E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.3E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.3E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.3E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 1.0E-83 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PIRSF PIRSF006160 1 162 1.3E-65 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SAMA_RS13255 8a043eda705a0278028e7a80f692ec31 169 PANTHER PTHR35799 2 169 6.0E-101 T 22-04-2016 SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 PANTHER PTHR31964 94 256 4.3E-15 T 22-04-2016 SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 SUPERFAMILY SSF52402 26 102 2.34E-6 T 22-04-2016 SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 PANTHER PTHR31964:SF41 94 256 4.3E-15 T 22-04-2016 SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 Pfam PF00582 Universal stress protein family 138 251 3.2E-9 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 Gene3D G3DSA:3.40.50.620 131 254 4.6E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 Gene3D G3DSA:3.40.50.620 38 103 1.5E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS03800 cd611628ff8aad6faba737429c5e1b30 258 SUPERFAMILY SSF52402 129 251 1.26E-14 T 22-04-2016 SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 PANTHER PTHR33540 1 153 2.6E-46 T 22-04-2016 SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 139 2.7E-47 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 1.4E-40 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 SUPERFAMILY SSF52540 1 126 5.57E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 Gene3D G3DSA:3.40.50.300 4 151 9.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15795 f2437619036cdf0a37b6826e38add773 153 PANTHER PTHR33540:SF2 1 153 2.6E-46 T 22-04-2016 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PIRSF PIRSF001369 5 378 1.0E-119 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 13 377 1.3E-156 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 ProSitePatterns PS00480 Citrate synthase signature. 260 272 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 200 228 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 253 273 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 310 326 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 178 193 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 128 141 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PRINTS PR00143 Citrate synthase signature 330 344 2.6E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 SUPERFAMILY SSF48256 12 377 2.36E-129 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 Gene3D G3DSA:1.10.580.10 19 239 1.6E-77 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 Gene3D G3DSA:1.10.230.10 240 324 3.1E-30 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 Pfam PF00285 Citrate synthase, C-terminal domain 13 359 7.4E-118 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS17170 24ec71dd85d59cec56d455851b39ffec 378 PANTHER PTHR11739 13 377 8.1E-161 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS06575 d7cbb11e1ba5b29609d25d2b29f53e9f 451 PIRSF PIRSF037714 3 451 1.4E-172 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein SAMA_RS06575 d7cbb11e1ba5b29609d25d2b29f53e9f 451 Pfam PF01618 MotA/TolQ/ExbB proton channel family 316 435 1.0E-27 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SAMA_RS06575 d7cbb11e1ba5b29609d25d2b29f53e9f 451 PANTHER PTHR30625:SF0 19 447 7.1E-187 T 22-04-2016 SAMA_RS06575 d7cbb11e1ba5b29609d25d2b29f53e9f 451 PANTHER PTHR30625 19 447 7.1E-187 T 22-04-2016 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 153 4.4E-36 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 PIRSF PIRSF004682 1 184 4.3E-67 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 Gene3D G3DSA:3.40.50.1000 2 180 2.5E-64 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 177 3.4E-79 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 PANTHER PTHR23133 2 182 1.7E-69 T 22-04-2016 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 SUPERFAMILY SSF56784 3 181 2.03E-51 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 PANTHER PTHR23133:SF3 2 182 1.7E-69 T 22-04-2016 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 Pfam PF13242 HAD-hyrolase-like 106 175 1.5E-13 T 22-04-2016 SAMA_RS07980 d121030dc64a77ae948c5aab71f0a28c 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 8.9E-43 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 37 218 2.0E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 Gene3D G3DSA:3.40.50.1240 35 206 7.1E-29 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 PANTHER PTHR23029 37 203 1.8E-25 T 22-04-2016 SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 SMART SM00855 36 195 5.8E-10 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 PANTHER PTHR23029:SF1 37 203 1.8E-25 T 22-04-2016 SAMA_RS03990 ee4cc99b882c5f2a8a4ac0c3e5bffabe 239 SUPERFAMILY SSF53254 32 224 3.43E-31 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 438 1.4E-161 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 SUPERFAMILY SSF52964 28 172 9.94E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Hamap MF_00671 Protein TolB [tolB]. 9 437 35.428 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Gene3D G3DSA:3.40.50.10070 23 174 7.6E-44 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 PANTHER PTHR11731 1 122 4.3E-114 T 22-04-2016 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 PANTHER PTHR11731 171 439 4.3E-114 T 22-04-2016 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 SUPERFAMILY SSF69304 165 439 1.27E-58 T 22-04-2016 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Pfam PF07676 WD40-like Beta Propeller Repeat 248 283 1.4E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Pfam PF07676 WD40-like Beta Propeller Repeat 335 369 0.002 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Pfam PF07676 WD40-like Beta Propeller Repeat 208 239 1.0E-7 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Pfam PF07676 WD40-like Beta Propeller Repeat 292 326 1.3E-12 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Gene3D G3DSA:2.120.10.30 191 439 2.1E-63 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 PANTHER PTHR11731:SF123 1 122 4.3E-114 T 22-04-2016 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 PANTHER PTHR11731:SF123 171 439 4.3E-114 T 22-04-2016 SAMA_RS10910 61001f88a95155395c948f678fd7e2c7 441 Pfam PF04052 TolB amino-terminal domain 23 126 1.6E-27 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 Pfam PF00313 'Cold-shock' DNA-binding domain 5 62 6.7E-8 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 SMART SM00894 145 180 1.6E-4 T 22-04-2016 IPR008613 Excalibur calcium-binding domain SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 SMART SM00357 3 68 3.4E-8 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 PANTHER PTHR12962:SF5 1 72 4.9E-17 T 22-04-2016 SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 Gene3D G3DSA:2.40.50.140 1 69 7.1E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 Pfam PF05901 Excalibur calcium-binding domain 147 180 2.2E-12 T 22-04-2016 IPR008613 Excalibur calcium-binding domain SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 PANTHER PTHR12962 1 72 4.9E-17 T 22-04-2016 SAMA_RS16185 21041a63a62e7ac62fa7f7da4ac00f21 186 SUPERFAMILY SSF50249 1 60 1.18E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 223.327 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 SUPERFAMILY SSF52821 407 483 3.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 370 7.8E-118 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 Pfam PF02926 THUMP domain 29 163 1.1E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 178 369 3.0E-69 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 PANTHER PTHR14911 3 419 2.0E-251 T 22-04-2016 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 484 8.7E-41 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 SUPERFAMILY SSF52402 179 374 2.87E-40 T 22-04-2016 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 PANTHER PTHR14911:SF15 3 419 2.0E-251 T 22-04-2016 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 Gene3D G3DSA:3.40.250.10 408 482 1.1E-10 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 SMART SM00981 77 167 6.1E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 Gene3D G3DSA:3.40.50.620 175 335 1.9E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS12700 2d16c3923dbb5c02e6edc377e710984f 484 SUPERFAMILY SSF143437 1 175 5.06E-51 T 22-04-2016 SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 PIRSF PIRSF029038 7 319 4.9E-117 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 Gene3D G3DSA:3.40.50.150 84 204 2.2E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 SUPERFAMILY SSF53335 55 316 6.36E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 Pfam PF05971 Protein of unknown function (DUF890) 19 316 1.3E-102 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 PANTHER PTHR13393:SF0 5 315 3.8E-112 T 22-04-2016 SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 PANTHER PTHR13393 5 315 3.8E-112 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 SAMA_RS18810 58f3100e2aadc066d86cadb1f902e285 319 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 18 319 50.051 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 Pfam PF00288 GHMP kinases N terminal domain 89 145 3.7E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 272 31.897 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 PANTHER PTHR20861:SF2 5 278 1.2E-90 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 SUPERFAMILY SSF54211 6 159 2.35E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 277 1.9E-84 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 PANTHER PTHR20861 5 278 1.2E-90 T 22-04-2016 SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 Pfam PF08544 GHMP kinases C terminal 209 258 2.6E-4 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 SUPERFAMILY SSF55060 162 277 4.65E-35 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 Gene3D G3DSA:3.30.230.10 7 160 4.9E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 Gene3D G3DSA:3.30.70.890 164 277 1.7E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS13395 526efb2883c6a572c248feb69cccfcb4 282 PIRSF PIRSF010376 3 279 2.2E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 Gene3D G3DSA:3.10.20.70 6 114 3.9E-5 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 SUPERFAMILY SSF54368 6 114 5.23E-9 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 SUPERFAMILY SSF55931 119 452 2.88E-102 T 22-04-2016 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 254 269 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 PANTHER PTHR20852 7 452 3.6E-128 T 22-04-2016 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 Pfam PF00120 Glutamine synthetase, catalytic domain 118 451 3.6E-103 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 Gene3D G3DSA:3.30.590.10 120 441 9.4E-93 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 SMART SM01230 117 373 3.2E-94 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS06155 cb1d9b8c0bee91d5b1d7b7330ba2f83e 455 PANTHER PTHR20852:SF7 7 452 3.6E-128 T 22-04-2016 SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 269 6.4E-44 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 SUPERFAMILY SSF52096 11 268 9.64E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 Gene3D G3DSA:3.90.226.10 13 210 1.5E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 PANTHER PTHR11941 2 268 1.4E-113 T 22-04-2016 SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 Gene3D G3DSA:1.10.12.10 213 270 7.7E-10 T 22-04-2016 IPR014748 Crontonase, C-terminal SAMA_RS07095 93bec2ec2fb6e7b24db0f508a2b09a9b 276 PANTHER PTHR11941:SF86 2 268 1.4E-113 T 22-04-2016 SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 2.3E-32 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 SUPERFAMILY SSF51197 1 152 3.02E-43 T 22-04-2016 SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 PANTHER PTHR34986 2 151 7.5E-53 T 22-04-2016 SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 Pfam PF04074 Domain of unknown function (DUF386) 1 151 3.9E-46 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 Gene3D G3DSA:2.60.120.370 1 152 2.0E-47 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SAMA_RS02695 b1580b120cb262216d6c1d16f57038bf 153 PANTHER PTHR34986:SF2 2 151 7.5E-53 T 22-04-2016 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 SMART SM00895 99 224 7.1E-16 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PANTHER PTHR11751 93 115 1.9E-49 T 22-04-2016 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PANTHER PTHR11751 1 77 1.9E-49 T 22-04-2016 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 Pfam PF07729 FCD domain 99 222 2.5E-16 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 SUPERFAMILY SSF48008 95 231 3.92E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PANTHER PTHR11751:SF355 93 115 1.9E-49 T 22-04-2016 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PANTHER PTHR11751:SF355 1 77 1.9E-49 T 22-04-2016 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 SMART SM00345 15 74 2.2E-27 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 Gene3D G3DSA:1.10.10.10 7 77 3.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.1E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 SUPERFAMILY SSF46785 6 77 5.46E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02035 af21402b6f2dde7dbfa2c7214487ddd4 250 Gene3D G3DSA:1.20.120.530 96 235 1.3E-16 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.952 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.8E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 Pfam PF01264 Chorismate synthase 10 345 1.4E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 PIRSF PIRSF001456 3 361 6.2E-139 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 Gene3D G3DSA:3.60.150.10 10 354 1.6E-158 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 PANTHER PTHR21085 2 351 5.6E-217 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS11280 34a595abc5338ae7196e2b73b69b4b25 365 SUPERFAMILY SSF103263 4 355 1.7E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 565 650 2.2E-5 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 651 765 5.4E-18 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 347 455 1.9E-9 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 53 140 1.4E-9 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 165 270 3.7E-12 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Gene3D G3DSA:2.20.110.10 475 553 2.2E-6 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 SUPERFAMILY SSF82185 213 331 1.96E-22 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 PANTHER PTHR33706 70 537 2.6E-33 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 317 332 0.65 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 474 494 0.36 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 170 186 0.038 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 291 311 0.17 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 243 262 0.14 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 700 719 0.0095 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 652 673 0.075 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 678 697 0.73 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 347 364 0.35 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 394 409 0.48 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 Pfam PF07661 MORN repeat variant 418 439 0.057 T 22-04-2016 IPR011652 MORN variant SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 SUPERFAMILY SSF82185 514 649 9.81E-16 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 SUPERFAMILY SSF82185 347 455 1.7E-16 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 PANTHER PTHR33706:SF1 70 537 2.6E-33 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 SUPERFAMILY SSF82185 62 191 9.81E-21 T 22-04-2016 SAMA_RS05565 62f1a54692df06851f494aa109219efe 768 SUPERFAMILY SSF82185 643 766 3.01E-25 T 22-04-2016 SAMA_RS09065 35698d9521ac0fe2357edf764fe001c0 386 SUPERFAMILY SSF48452 39 240 2.49E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS09065 35698d9521ac0fe2357edf764fe001c0 386 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 384 34.861 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 SAMA_RS09065 35698d9521ac0fe2357edf764fe001c0 386 PANTHER PTHR23083 8 223 4.8E-19 T 22-04-2016 SAMA_RS09065 35698d9521ac0fe2357edf764fe001c0 386 PANTHER PTHR23083 328 352 4.8E-19 T 22-04-2016 SAMA_RS09065 35698d9521ac0fe2357edf764fe001c0 386 Gene3D G3DSA:1.25.40.10 42 241 4.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS05620 651060cde24547060693d196d1470811 303 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.8E-112 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SAMA_RS05620 651060cde24547060693d196d1470811 303 PANTHER PTHR38103:SF1 2 303 5.0E-149 T 22-04-2016 SAMA_RS05620 651060cde24547060693d196d1470811 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 36.018 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SAMA_RS05620 651060cde24547060693d196d1470811 303 PANTHER PTHR38103 2 303 5.0E-149 T 22-04-2016 SAMA_RS06705 48520011e2bd047e1035a569b405b8cf 477 PANTHER PTHR30252 1 477 1.6E-155 T 22-04-2016 SAMA_RS06705 48520011e2bd047e1035a569b405b8cf 477 PANTHER PTHR30252:SF0 1 477 1.6E-155 T 22-04-2016 SAMA_RS06705 48520011e2bd047e1035a569b405b8cf 477 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 320 430 1.5E-20 T 22-04-2016 IPR025299 CstA, C-terminal domain SAMA_RS06705 48520011e2bd047e1035a569b405b8cf 477 Pfam PF02554 Carbon starvation protein CstA 5 145 4.6E-34 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SAMA_RS06705 48520011e2bd047e1035a569b405b8cf 477 Pfam PF02554 Carbon starvation protein CstA 156 287 3.9E-19 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 PANTHER PTHR11918 2 208 2.1E-64 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 PANTHER PTHR11918:SF47 2 208 2.1E-64 T 22-04-2016 SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 Gene3D G3DSA:3.20.20.70 18 201 3.3E-23 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 SUPERFAMILY SSF102114 4 241 8.76E-30 T 22-04-2016 SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 SMART SM00729 16 236 9.5E-22 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS02200 42df3a0ba2fe81337b2bd7673a9ddfd2 294 Pfam PF04055 Radical SAM superfamily 21 178 1.2E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615:SF123 644 829 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615:SF123 346 597 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615:SF123 1 286 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 1 828 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:3.40.50.740 622 669 4.3E-82 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:3.40.50.740 96 178 4.3E-82 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:3.40.50.740 399 576 4.3E-82 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:2.40.40.20 670 829 2.8E-48 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Hamap MF_01630 Nitrate reductase [napA]. 1 829 29.398 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 1.0E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 SUPERFAMILY SSF53706 36 701 3.27E-205 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 SUPERFAMILY SSF50692 689 829 4.07E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:3.40.228.10 326 398 2.1E-53 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:3.40.228.10 179 291 2.1E-53 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615 644 829 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615 346 597 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 PANTHER PTHR11615 1 286 0.0 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Gene3D G3DSA:2.20.25.90 36 95 7.3E-18 T 22-04-2016 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Pfam PF00384 Molybdopterin oxidoreductase 96 569 9.4E-94 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 SMART SM00926 39 93 1.9E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS08475 5c2dcf70be86be844fc4803a16928a34 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 92 4.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Gene3D G3DSA:3.30.70.270 1058 1222 2.1E-56 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Gene3D G3DSA:2.130.10.10 258 477 4.2E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF63829 25 174 2.09E-5 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SMART SM00091 933 1001 7.7E-4 T 22-04-2016 IPR000014 PAS domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF55073 1061 1218 2.75E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1056 1211 6.7E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 933 1052 3.3E-13 T 22-04-2016 IPR000014 PAS domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 844 931 2.6E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Pfam PF07494 Two component regulator propeller 38 61 0.011 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Pfam PF08447 PAS fold 857 918 8.1E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF55785 846 926 7.68E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Gene3D G3DSA:3.30.450.20 928 1043 5.3E-20 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Pfam PF08448 PAS fold 939 1047 2.8E-10 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SMART SM00086 881 925 4.3E-5 T 22-04-2016 IPR001610 PAC motif SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SMART SM00086 1003 1045 6.9E-6 T 22-04-2016 IPR001610 PAC motif SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SMART SM00267 1045 1216 2.6E-63 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Pfam PF00563 EAL domain 1232 1468 7.4E-78 T 22-04-2016 IPR001633 EAL domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF55785 944 1054 1.37E-18 T 22-04-2016 IPR000014 PAS domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF141868 1232 1478 9.55E-90 T 22-04-2016 IPR001633 EAL domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Gene3D G3DSA:3.30.450.20 801 923 1.2E-14 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SMART SM00052 1226 1473 1.4E-117 T 22-04-2016 IPR001633 EAL domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 PANTHER PTHR10799 739 1327 1.1E-79 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 Gene3D G3DSA:3.20.20.450 1229 1478 1.7E-95 T 22-04-2016 IPR001633 EAL domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 PANTHER PTHR10799:SF710 739 1327 1.1E-79 T 22-04-2016 SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1053 1214 1.3E-39 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02055 309b2ebf5d6d892ab33937355804ed5d 1491 SUPERFAMILY SSF63829 181 378 1.08E-9 T 22-04-2016 SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 PANTHER PTHR11712 1 403 7.9E-172 T 22-04-2016 SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 SUPERFAMILY SSF53901 213 402 4.94E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.8E-46 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.6E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 SUPERFAMILY SSF53901 1 251 7.78E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.4E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 Gene3D G3DSA:3.40.47.10 260 402 2.4E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11255 d20f18821ce88742a4595fb90dffc060 403 Gene3D G3DSA:3.40.47.10 6 257 2.2E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 Pfam PF16234 Domain of unknown function (DUF4892) 194 328 3.7E-9 T 22-04-2016 IPR032608 Protein of unknown function DUF4892 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 PANTHER PTHR30128 371 477 2.4E-34 T 22-04-2016 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 SUPERFAMILY SSF103088 369 476 2.49E-32 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 Pfam PF00691 OmpA family 374 470 1.6E-18 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 PRINTS PR01021 OMPA domain signature 405 420 3.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 PRINTS PR01021 OMPA domain signature 420 436 3.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 PRINTS PR01021 OMPA domain signature 375 397 3.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03680 1b59d38568a55202f58d1d6122818c1e 481 Gene3D G3DSA:3.30.1330.60 371 476 1.5E-33 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS19210 00f15629cd42c16d86957bc48f5896e8 148 SUPERFAMILY SSF74653 49 120 2.22E-15 T 22-04-2016 SAMA_RS19210 00f15629cd42c16d86957bc48f5896e8 148 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 53 113 4.6E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS19210 00f15629cd42c16d86957bc48f5896e8 148 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 53 119 1.6E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS19210 00f15629cd42c16d86957bc48f5896e8 148 Gene3D G3DSA:3.30.1150.10 33 114 2.4E-5 T 22-04-2016 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 Pfam PF00266 Aminotransferase class-V 4 351 1.4E-51 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 PANTHER PTHR21152:SF1 4 362 1.5E-173 T 22-04-2016 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 SUPERFAMILY SSF53383 2 360 1.16E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 Gene3D G3DSA:3.40.640.10 17 259 4.7E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 PANTHER PTHR21152 4 362 1.5E-173 T 22-04-2016 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 362 9.3E-145 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 Gene3D G3DSA:3.90.1150.10 261 362 1.0E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 362 48.366 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SAMA_RS09030 df9cd6c9d732111034dab67d9b58633d 364 PIRSF PIRSF000525 1 363 2.2E-139 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 PANTHER PTHR22911 4 293 2.2E-56 T 22-04-2016 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 Pfam PF00892 EamA-like transporter family 4 135 1.8E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 Pfam PF00892 EamA-like transporter family 156 294 5.5E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 PANTHER PTHR22911:SF64 4 293 2.2E-56 T 22-04-2016 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 SUPERFAMILY SSF103481 200 294 1.09E-9 T 22-04-2016 SAMA_RS00585 77ae5bf6ddd5959f373cd22d047e2ac1 296 SUPERFAMILY SSF103481 36 141 1.83E-12 T 22-04-2016 SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 SUPERFAMILY SSF55073 173 318 4.39E-34 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 321 1.3E-34 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 Gene3D G3DSA:3.30.450.40 23 164 8.3E-14 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 PANTHER PTHR10799:SF774 101 316 4.8E-14 T 22-04-2016 SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 PANTHER PTHR10799 101 316 4.8E-14 T 22-04-2016 SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 Gene3D G3DSA:3.30.70.270 170 319 1.9E-36 T 22-04-2016 SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 SMART SM00267 158 323 8.0E-31 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 319 1.2E-33 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 Pfam PF01590 GAF domain 23 130 9.2E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 SUPERFAMILY SSF55781 22 165 4.58E-19 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS06295 0da560088f3e7cfd200f861d26306453 324 SMART SM00065 20 165 0.0027 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 SUPERFAMILY SSF55874 362 504 4.85E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 SMART SM00304 229 281 1.9E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 Gene3D G3DSA:1.10.287.130 290 344 1.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 PANTHER PTHR24423 223 509 1.3E-29 T 22-04-2016 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 PANTHER PTHR24423 3 16 1.3E-29 T 22-04-2016 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 Gene3D G3DSA:3.30.565.10 345 506 3.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 506 2.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 SUPERFAMILY SSF158472 229 278 5.89E-7 T 22-04-2016 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 SMART SM00387 399 508 2.8E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 SUPERFAMILY SSF47384 287 357 5.89E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 6.3E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 6.3E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS08070 4fd5bbc1a89e62e26f04d282c22801e5 509 Pfam PF00672 HAMP domain 210 277 3.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 SMART SM00487 20 223 3.7E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 PANTHER PTHR24031 2 387 1.9E-151 T 22-04-2016 SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 Gene3D G3DSA:3.40.50.300 213 370 1.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 SMART SM00490 259 340 2.9E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 SUPERFAMILY SSF52540 76 361 2.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.8E-25 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 Pfam PF00270 DEAD/DEAH box helicase 25 194 2.0E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 Gene3D G3DSA:3.40.50.300 2 212 5.4E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12565 487e55412f11627a1b98cf90353ef73f 407 SUPERFAMILY SSF52540 25 101 3.19E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Pfam PF01434 Peptidase family M41 387 597 9.6E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Gene3D G3DSA:3.40.50.300 152 336 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 SUPERFAMILY SSF52540 149 396 7.91E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Pfam PF06480 FtsH Extracellular 8 89 6.0E-8 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Gene3D G3DSA:1.10.8.60 337 411 2.2E-29 T 22-04-2016 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 SUPERFAMILY SSF140990 407 608 4.71E-74 T 22-04-2016 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 598 4.4E-246 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 PANTHER PTHR23076 3 649 0.0 T 22-04-2016 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 SMART SM00382 189 328 3.1E-25 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.7E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS04985 fb3b6ad572fc45f3aaca4e4914214a03 650 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 614 37.298 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 Gene3D G3DSA:1.20.5.710 2 52 3.4E-22 T 22-04-2016 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.0E-46 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 SUPERFAMILY SSF48300 3 59 1.09E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.935 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 Gene3D G3DSA:3.30.1390.10 53 123 2.1E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 1.3E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 7.4E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 SUPERFAMILY SSF54736 52 123 1.34E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SAMA_RS01085 cfea3067515f1ce7041e4a8e0fd932fe 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 82 2.0E-7 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 Gene3D G3DSA:3.30.830.10 33 248 1.1E-38 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 PANTHER PTHR11851:SF136 38 440 1.5E-63 T 22-04-2016 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 Pfam PF05193 Peptidase M16 inactive domain 200 311 2.9E-6 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 PANTHER PTHR11851 38 440 1.5E-63 T 22-04-2016 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 SUPERFAMILY SSF63411 34 247 4.28E-41 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 SUPERFAMILY SSF63411 264 443 2.38E-12 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 Pfam PF00675 Insulinase (Peptidase family M16) 53 166 1.0E-20 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS03810 cb7895bb425308defda2c0cb2d8be938 478 Gene3D G3DSA:3.30.830.10 286 442 1.6E-6 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS12460 a4913a2d29bb80ded73471021e594a80 71 SUPERFAMILY SSF48076 4 56 5.36E-7 T 22-04-2016 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit SAMA_RS12460 a4913a2d29bb80ded73471021e594a80 71 Gene3D G3DSA:1.10.700.10 4 56 2.0E-5 T 22-04-2016 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit SAMA_RS12460 a4913a2d29bb80ded73471021e594a80 71 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 4 59 2.9E-7 T 22-04-2016 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 12 273 57.487 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 Gene3D G3DSA:3.40.50.620 25 208 9.3E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 PANTHER PTHR11807:SF16 1 269 1.8E-116 T 22-04-2016 SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 Pfam PF01171 PP-loop family 44 207 3.3E-13 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 SUPERFAMILY SSF52402 19 238 2.87E-55 T 22-04-2016 SAMA_RS09390 ca7916c89b41ca6d9bb49ed2d8429541 319 PANTHER PTHR11807 1 269 1.8E-116 T 22-04-2016 SAMA_RS04245 21761e789694316883af58714839bd3b 317 Pfam PF04463 Protein of unknown function (DUF523) 11 151 2.6E-37 T 22-04-2016 IPR007553 Domain of unknown function DUF523 SAMA_RS04245 21761e789694316883af58714839bd3b 317 PANTHER PTHR30087 1 317 4.8E-141 T 22-04-2016 SAMA_RS04245 21761e789694316883af58714839bd3b 317 PANTHER PTHR30087:SF0 1 317 4.8E-141 T 22-04-2016 SAMA_RS04245 21761e789694316883af58714839bd3b 317 Pfam PF08349 Protein of unknown function (DUF1722) 194 308 3.8E-40 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 SAMA_RS04245 21761e789694316883af58714839bd3b 317 PIRSF PIRSF037004 1 317 9.2E-126 T 22-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 8 381 51.933 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 PANTHER PTHR11014 5 380 4.7E-100 T 22-04-2016 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Pfam PF07687 Peptidase dimerisation domain 181 288 1.8E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Gene3D G3DSA:3.30.70.360 194 293 1.0E-35 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 141 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 11 379 2.0E-171 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Gene3D G3DSA:3.40.630.10 322 380 3.0E-73 T 22-04-2016 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Gene3D G3DSA:3.40.630.10 7 193 3.0E-73 T 22-04-2016 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 SUPERFAMILY SSF55031 185 294 8.07E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 PANTHER PTHR11014:SF106 5 380 4.7E-100 T 22-04-2016 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 Pfam PF01546 Peptidase family M20/M25/M40 68 377 5.2E-41 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 SUPERFAMILY SSF53187 298 379 4.92E-67 T 22-04-2016 SAMA_RS08605 c37cc6975d0980ffa346de2808118278 382 SUPERFAMILY SSF53187 7 184 4.92E-67 T 22-04-2016 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PRINTS PR00723 Subtilisin serine protease family (S8) signature 162 181 1.3E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 1.3E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PRINTS PR00723 Subtilisin serine protease family (S8) signature 444 460 1.3E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795 443 489 1.4E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795 122 320 1.4E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795 346 413 1.4E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795 509 666 1.4E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 Pfam PF00082 Subtilase family 162 524 9.4E-36 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 Pfam PF01483 Proprotein convertase P-domain 582 667 1.9E-13 T 22-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 Gene3D G3DSA:3.40.50.200 119 540 3.1E-79 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 SUPERFAMILY SSF52743 121 323 3.67E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 SUPERFAMILY SSF52743 352 538 3.67E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 445 455 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795:SF416 443 489 1.4E-63 T 22-04-2016 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795:SF416 122 320 1.4E-63 T 22-04-2016 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795:SF416 346 413 1.4E-63 T 22-04-2016 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 PANTHER PTHR10795:SF416 509 666 1.4E-63 T 22-04-2016 SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 Gene3D G3DSA:2.60.120.260 573 699 4.2E-25 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 SUPERFAMILY SSF49785 555 700 5.53E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS11630 b3287d44ee9a12fb43a8d4ef042e3a6e 705 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 167 178 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS06680 ea809006beecd611175f714c7463220a 705 Gene3D G3DSA:3.20.70.20 123 684 9.7E-182 T 22-04-2016 SAMA_RS06680 ea809006beecd611175f714c7463220a 705 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 115 704 2.0E-181 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SAMA_RS06680 ea809006beecd611175f714c7463220a 705 PANTHER PTHR21075 1 704 1.4E-289 T 22-04-2016 SAMA_RS06680 ea809006beecd611175f714c7463220a 705 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 704 6.9E-197 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SAMA_RS06680 ea809006beecd611175f714c7463220a 705 ProSitePatterns PS00850 Glycine radical domain signature. 675 683 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SAMA_RS06680 ea809006beecd611175f714c7463220a 705 SUPERFAMILY SSF51998 120 686 1.14E-186 T 22-04-2016 SAMA_RS06680 ea809006beecd611175f714c7463220a 705 Pfam PF03477 ATP cone domain 3 88 1.5E-16 T 22-04-2016 IPR005144 ATP-cone domain SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 PANTHER PTHR21363 92 379 4.7E-64 T 22-04-2016 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 SUPERFAMILY SSF48179 246 371 6.8E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 Pfam PF02153 Prephenate dehydrogenase 143 348 1.0E-25 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 Gene3D G3DSA:1.10.3660.10 253 377 1.6E-49 T 22-04-2016 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 SUPERFAMILY SSF48600 8 93 6.23E-22 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 Pfam PF01817 Chorismate mutase type II 13 90 3.4E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 SUPERFAMILY SSF51735 95 243 9.84E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 PIRSF PIRSF001499 5 379 4.1E-169 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 SMART SM00830 13 93 5.9E-27 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 PANTHER PTHR21363:SF0 92 379 4.7E-64 T 22-04-2016 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 TIGRFAM TIGR01799 CM_T: chorismate mutase 9 91 1.2E-43 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 Gene3D G3DSA:3.40.50.720 88 252 1.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04670 8edc1dc3278d74dccd8edc847e85d511 379 Gene3D G3DSA:1.20.59.10 3 87 6.8E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Pfam PF00326 Prolyl oligopeptidase family 628 823 8.2E-47 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731 384 824 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731 128 175 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731 264 358 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Gene3D G3DSA:2.140.10.30 52 189 1.9E-58 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Gene3D G3DSA:2.140.10.30 377 554 1.9E-58 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Gene3D G3DSA:2.140.10.30 234 342 1.9E-58 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 SUPERFAMILY SSF82171 53 185 5.76E-44 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 SUPERFAMILY SSF82171 246 274 5.76E-44 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 SUPERFAMILY SSF82171 312 555 5.76E-44 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731:SF145 384 824 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731:SF145 128 175 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 PANTHER PTHR11731:SF145 264 358 7.1E-224 T 22-04-2016 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 SUPERFAMILY SSF53474 575 820 2.51E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 377 532 3.4E-21 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 SAMA_RS15720 7603295a4ca4a15a22a8e2cb2b30a4a5 824 Gene3D G3DSA:3.40.50.1820 567 822 2.8E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 Pfam PF02626 Allophanate hydrolase subunit 2 24 278 1.0E-89 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 PANTHER PTHR18866 145 270 1.1E-24 T 22-04-2016 SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 SMART SM00797 23 295 9.6E-128 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 Gene3D G3DSA:2.40.100.10 184 290 1.5E-7 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 302 5.5E-104 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 PANTHER PTHR18866:SF74 145 270 1.1E-24 T 22-04-2016 SAMA_RS00100 12188e894466c18f7e26c3e000e0fa80 310 SUPERFAMILY SSF50891 178 285 5.69E-12 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 Gene3D G3DSA:3.40.50.1820 340 648 2.5E-81 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 Gene3D G3DSA:3.40.50.1820 280 290 2.5E-81 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 PANTHER PTHR11731 104 649 1.1E-202 T 22-04-2016 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 Gene3D G3DSA:2.120.10.30 21 95 8.7E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 Gene3D G3DSA:2.120.10.30 173 279 8.7E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 449 473 7.1E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 564 579 7.1E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 527 7.1E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 SUPERFAMILY SSF53474 392 648 1.67E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 Pfam PF00326 Prolyl oligopeptidase family 438 648 2.7E-47 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 PANTHER PTHR11731:SF119 104 649 1.1E-202 T 22-04-2016 SAMA_RS01735 e00ae14c2c4677d7d8d1c652d7a88d95 649 SUPERFAMILY SSF82171 22 393 8.76E-24 T 22-04-2016 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 411 9.6E-39 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 SUPERFAMILY SSF109998 247 428 1.18E-50 T 22-04-2016 IPR027304 Trigger factor/SurA domain SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.9E-43 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 SUPERFAMILY SSF54534 101 240 6.09E-37 T 22-04-2016 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 SUPERFAMILY SSF102735 1 129 7.32E-38 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 PANTHER PTHR30560 1 429 6.6E-143 T 22-04-2016 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Gene3D G3DSA:1.10.3120.10 215 387 2.9E-63 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Gene3D G3DSA:3.10.50.40 155 214 1.3E-10 T 22-04-2016 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 154 235 5.6E-16 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 TIGRFAM TIGR00115 tig: trigger factor 11 411 4.5E-141 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Gene3D G3DSA:3.30.70.1050 1 117 6.3E-38 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 Hamap MF_00303 Trigger factor [tig]. 1 417 21.966 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 PIRSF PIRSF003095 1 432 1.2E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SAMA_RS06415 44f6ea0373f35a530fab945345325e65 434 PANTHER PTHR30560:SF3 1 429 6.6E-143 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SUPERFAMILY SSF55021 2 69 1.73E-6 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SMART SM00091 80 146 0.0069 T 22-04-2016 IPR000014 PAS domain SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SUPERFAMILY SSF55785 82 174 5.06E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SMART SM00382 225 363 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 462 510 2.6E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Gene3D G3DSA:1.10.10.60 453 510 2.8E-26 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Pfam PF00158 Sigma-54 interaction domain 208 366 4.0E-53 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Pfam PF01842 ACT domain 2 62 1.4E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Gene3D G3DSA:3.40.50.300 202 373 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Gene3D G3DSA:3.30.70.260 2 68 7.3E-7 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 PANTHER PTHR32071:SF3 7 512 8.0E-187 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 PANTHER PTHR32071 7 512 8.0E-187 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Gene3D G3DSA:1.10.8.60 374 444 8.2E-20 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 414 423 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SUPERFAMILY SSF46689 454 509 3.34E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 Gene3D G3DSA:3.30.450.20 77 149 1.7E-7 T 22-04-2016 SAMA_RS11645 ee069a94ca980e77924645df43ab7534 512 SUPERFAMILY SSF52540 206 435 4.56E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 SUPERFAMILY SSF52540 226 448 7.65E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 Gene3D G3DSA:1.10.8.60 400 453 5.2E-8 T 22-04-2016 SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 PANTHER PTHR23077 98 487 7.6E-125 T 22-04-2016 SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 264 390 6.5E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 SMART SM00382 260 393 1.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 Gene3D G3DSA:3.40.50.300 227 399 7.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 SUPERFAMILY SSF52540 32 209 6.9E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14655 cd4291f8928c23a5dc2dd1fac876c174 490 PANTHER PTHR23077:SF75 98 487 7.6E-125 T 22-04-2016 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 Gene3D G3DSA:3.10.420.10 6 153 6.4E-64 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PANTHER PTHR36918:SF1 1 159 4.2E-87 T 22-04-2016 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 145 5.1E-62 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 SUPERFAMILY SSF54611 4 144 1.07E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PANTHER PTHR36918 1 159 4.2E-87 T 22-04-2016 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 34.189 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 Pfam PF02556 Preprotein translocase subunit SecB 8 146 2.1E-58 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 6.9E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 6.9E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 6.9E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS00315 8f9559c4259616ba8bc3da5540e578ba 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 6.9E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.91 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 Pfam PF00814 Glycoprotease family 24 307 1.4E-101 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 9.2E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 SUPERFAMILY SSF53067 3 123 3.21E-31 T 22-04-2016 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 5.7E-123 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PANTHER PTHR11735 1 334 2.6E-166 T 22-04-2016 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 Gene3D G3DSA:3.30.420.40 1 159 9.7E-48 T 22-04-2016 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 PANTHER PTHR11735:SF6 1 334 2.6E-166 T 22-04-2016 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.0E-134 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS04335 b7c275d2c3cf6f28a808957dd4b91831 337 SUPERFAMILY SSF53067 102 309 3.89E-45 T 22-04-2016 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.566 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 PIRSF PIRSF006102 1 192 3.0E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 6.3E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 PANTHER PTHR30335:SF0 2 192 9.8E-125 T 22-04-2016 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.3E-86 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SAMA_RS09585 baae2a2efd32725b7db39175d99983a3 192 PANTHER PTHR30335 2 192 9.8E-125 T 22-04-2016 SAMA_RS00830 889018345e483d01fb7fa68015a71bbb 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 105 4.2E-17 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS00830 889018345e483d01fb7fa68015a71bbb 135 Gene3D G3DSA:3.90.1590.10 1 132 6.1E-37 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS00830 889018345e483d01fb7fa68015a71bbb 135 SUPERFAMILY SSF51316 1 132 1.36E-41 T 22-04-2016 IPR011057 Mss4-like SAMA_RS00830 889018345e483d01fb7fa68015a71bbb 135 PANTHER PTHR33337 1 130 9.1E-28 T 22-04-2016 SAMA_RS00830 889018345e483d01fb7fa68015a71bbb 135 PANTHER PTHR33337:SF11 1 130 9.1E-28 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SUPERFAMILY SSF55073 586 744 3.14E-52 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF08447 PAS fold 353 442 1.2E-21 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF08447 PAS fold 227 295 3.5E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF13426 PAS domain 467 569 6.5E-15 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Gene3D G3DSA:3.20.20.450 755 1001 3.5E-94 T 22-04-2016 IPR001633 EAL domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SUPERFAMILY SSF55785 214 318 7.89E-17 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SUPERFAMILY SSF55785 462 568 3.7E-25 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF07694 5TMR of 5TMR-LYT 29 187 4.1E-30 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF00990 Diguanylate cyclase, GGDEF domain 581 738 5.1E-52 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00091 330 398 3.6E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00091 204 270 8.5E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00091 456 522 1.8E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 453 575 2.0E-20 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 206 322 4.6E-13 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 453 1.2E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Pfam PF00563 EAL domain 758 994 2.6E-73 T 22-04-2016 IPR001633 EAL domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00086 405 448 8.2E-6 T 22-04-2016 IPR001610 PAC motif SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00086 528 570 0.29 T 22-04-2016 IPR001610 PAC motif SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00086 277 318 0.39 T 22-04-2016 IPR001610 PAC motif SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00052 752 999 5.0E-106 T 22-04-2016 IPR001633 EAL domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Gene3D G3DSA:3.30.450.20 336 446 1.8E-29 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Gene3D G3DSA:3.30.70.270 583 750 6.7E-61 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SUPERFAMILY SSF141868 758 1003 1.31E-86 T 22-04-2016 IPR001633 EAL domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Gene3D G3DSA:3.30.450.20 464 569 1.7E-25 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 PANTHER PTHR10799 614 852 1.2E-85 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 PANTHER PTHR10799 33 397 1.2E-85 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 PANTHER PTHR10799:SF774 614 852 1.2E-85 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 PANTHER PTHR10799:SF774 33 397 1.2E-85 T 22-04-2016 SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 579 741 3.6E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SUPERFAMILY SSF55785 336 449 1.19E-23 T 22-04-2016 IPR000014 PAS domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 SMART SM00267 569 742 5.4E-71 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12785 2ea0c3c5309f062d65df49d794f28d44 1005 Gene3D G3DSA:3.30.450.20 214 335 4.7E-17 T 22-04-2016 SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 SUPERFAMILY SSF52833 1 112 5.33E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 Pfam PF03960 ArsC family 8 109 3.2E-17 T 22-04-2016 IPR006660 Arsenate reductase-like SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 110 3.4E-28 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 PANTHER PTHR30041 1 112 3.4E-36 T 22-04-2016 SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 PANTHER PTHR30041:SF3 1 112 3.4E-36 T 22-04-2016 SAMA_RS08610 8d1a028f2cb39bfc9adbf0701dd1751f 114 Gene3D G3DSA:3.40.30.10 1 112 2.0E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 Pfam PF00294 pfkB family carbohydrate kinase 180 268 8.2E-19 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 Pfam PF00294 pfkB family carbohydrate kinase 2 108 2.9E-11 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 Gene3D G3DSA:3.40.1190.20 2 279 5.6E-47 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 PANTHER PTHR10584:SF166 1 265 2.7E-37 T 22-04-2016 SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 SUPERFAMILY SSF53613 4 266 3.12E-51 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 225 238 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SAMA_RS18290 6016433fc2b9cde873e000b9de1d17f1 292 PANTHER PTHR10584 1 265 2.7E-37 T 22-04-2016 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SMART SM00533 288 595 1.9E-103 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SUPERFAMILY SSF53150 119 271 1.19E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Gene3D G3DSA:3.40.50.300 572 801 1.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 851 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Pfam PF05190 MutS family domain IV 432 521 2.8E-27 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Gene3D G3DSA:3.40.1170.10 8 125 2.1E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 12 846 25.314 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Gene3D G3DSA:1.10.1420.10 321 481 4.9E-55 T 22-04-2016 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SMART SM00534 611 798 1.9E-119 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SUPERFAMILY SSF52540 571 801 2.58E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SUPERFAMILY SSF55271 8 120 2.62E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Pfam PF00488 MutS domain V 614 801 1.6E-87 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Pfam PF05192 MutS domain III 274 563 1.2E-38 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Gene3D G3DSA:3.30.420.110 131 260 5.9E-40 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 SUPERFAMILY SSF48334 272 569 6.8E-89 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Pfam PF01624 MutS domain I 13 124 2.2E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 PANTHER PTHR11361:SF86 7 854 0.0 T 22-04-2016 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 PANTHER PTHR11361 7 854 0.0 T 22-04-2016 SAMA_RS05445 0104e17aa985d665d0f3a6449aa86540 854 Pfam PF05188 MutS domain II 133 257 4.9E-29 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 Pfam PF13649 Methyltransferase domain 188 282 2.2E-15 T 22-04-2016 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 SUPERFAMILY SSF46955 3 103 2.67E-22 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 SUPERFAMILY SSF53335 136 386 4.14E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 Pfam PF13411 MerR HTH family regulatory protein 4 64 4.0E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 SMART SM00422 3 71 1.6E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 PANTHER PTHR10108 171 339 2.2E-29 T 22-04-2016 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 PANTHER PTHR10108:SF855 171 339 2.2E-29 T 22-04-2016 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 Gene3D G3DSA:3.40.50.150 152 365 3.2E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.5E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS00390 3d06c567f8dc158697311e562987af8c 391 Gene3D G3DSA:1.10.1660.10 3 104 2.8E-25 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 PANTHER PTHR26402 33 108 2.7E-19 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Gene3D G3DSA:1.10.10.10 4 108 4.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 108 1.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Gene3D G3DSA:2.120.10.60 450 683 1.9E-23 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 SUPERFAMILY SSF82171 268 575 1.96E-36 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 SUPERFAMILY SSF82171 167 304 1.06E-15 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Pfam PF07676 WD40-like Beta Propeller Repeat 213 236 0.022 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Pfam PF07676 WD40-like Beta Propeller Repeat 495 509 0.0053 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Pfam PF07676 WD40-like Beta Propeller Repeat 167 189 0.0047 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Pfam PF07676 WD40-like Beta Propeller Repeat 316 334 0.015 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 SUPERFAMILY SSF46894 8 110 7.09E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 PANTHER PTHR26402:SF402 33 108 2.7E-19 T 22-04-2016 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 SMART SM00862 33 108 6.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS04435 7e9883556db130f0c78b5949863cf86a 700 Gene3D G3DSA:2.120.10.30 165 418 7.2E-44 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 PIRSF PIRSF000102 1 305 1.4E-59 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 SUPERFAMILY SSF51735 1 145 1.61E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 56.51 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.0E-128 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 3.2E-49 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 Gene3D G3DSA:3.40.50.720 1 146 1.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 Gene3D G3DSA:3.90.110.10 147 311 8.7E-63 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 PANTHER PTHR11540:SF22 1 311 2.5E-225 T 22-04-2016 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 PANTHER PTHR11540 1 311 2.5E-225 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SAMA_RS03550 e1177afd31291a1aa6fd12a8ad7f2a80 311 SUPERFAMILY SSF56327 146 310 2.78E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SAMA_RS17230 806338ce65bf89575228ab4e80f1a5a6 381 PANTHER PTHR23502 7 378 5.6E-48 T 22-04-2016 SAMA_RS17230 806338ce65bf89575228ab4e80f1a5a6 381 Pfam PF07690 Major Facilitator Superfamily 18 349 1.2E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS17230 806338ce65bf89575228ab4e80f1a5a6 381 SUPERFAMILY SSF103473 5 379 2.09E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS17230 806338ce65bf89575228ab4e80f1a5a6 381 Gene3D G3DSA:1.20.1250.20 4 186 3.3E-27 T 22-04-2016 SAMA_RS17230 806338ce65bf89575228ab4e80f1a5a6 381 Gene3D G3DSA:1.20.1250.20 210 377 1.2E-4 T 22-04-2016 SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 6 190 3.7E-81 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 PANTHER PTHR11055 4 196 9.5E-124 T 22-04-2016 SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 22 194 38.21 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 Pfam PF01583 Adenylylsulphate kinase 23 176 2.6E-70 T 22-04-2016 SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 Gene3D G3DSA:3.40.50.300 2 197 8.9E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15080 ba0bb77cde0dacb1e52b0aff5ad1a235 198 SUPERFAMILY SSF52540 21 191 8.99E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 178 191 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Pfam PF00158 Sigma-54 interaction domain 154 320 2.9E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 SUPERFAMILY SSF52540 153 383 1.58E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Gene3D G3DSA:1.10.10.60 408 451 1.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Gene3D G3DSA:3.40.50.300 152 325 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 PANTHER PTHR32071:SF18 1 460 1.2E-206 T 22-04-2016 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 PANTHER PTHR32071 1 460 1.2E-206 T 22-04-2016 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Pfam PF00072 Response regulator receiver domain 17 126 2.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Gene3D G3DSA:3.40.50.2300 16 145 1.8E-33 T 22-04-2016 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 8.4E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 SMART SM00382 174 317 4.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 SUPERFAMILY SSF52172 15 199 9.96E-42 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 SMART SM00448 15 126 7.9E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 SUPERFAMILY SSF46689 364 451 3.84E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 Gene3D G3DSA:1.10.8.60 326 385 8.8E-17 T 22-04-2016 SAMA_RS00630 0ae73c33e3e8968d99776fe5c343033f 460 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 PANTHER PTHR20852:SF63 1 451 1.4E-297 T 22-04-2016 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 SUPERFAMILY SSF54368 2 109 5.75E-17 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 Gene3D G3DSA:3.30.590.10 114 438 1.8E-91 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 SUPERFAMILY SSF55931 110 448 2.16E-103 T 22-04-2016 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 Pfam PF00120 Glutamine synthetase, catalytic domain 111 445 5.2E-106 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 Gene3D G3DSA:3.10.20.70 2 113 9.3E-15 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 246 261 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 PANTHER PTHR20852 1 451 1.4E-297 T 22-04-2016 SAMA_RS13850 1dcafc7dc2b3985c3adb8f7fb64c7328 451 SMART SM01230 110 366 8.4E-108 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 364 374 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 213 381 3.6E-21 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 SUPERFAMILY SSF53335 7 381 7.04E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 314 345 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 Gene3D G3DSA:3.40.50.150 186 379 1.2E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 7 374 2.4E-55 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 6 382 81.531 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 8 380 2.2E-171 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 PANTHER PTHR11061:SF36 1 386 1.6E-217 T 22-04-2016 SAMA_RS03345 71420a92079a9a7062737da6039a948f 389 PANTHER PTHR11061 1 386 1.6E-217 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 SUPERFAMILY SSF53067 332 446 2.16E-23 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 SUPERFAMILY SSF53067 212 280 2.16E-23 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375:SF182 2 45 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375:SF182 89 273 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375:SF182 326 442 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 217 230 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375 2 45 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375 89 273 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 PANTHER PTHR19375 326 442 1.8E-88 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 SUPERFAMILY SSF53067 89 207 3.24E-19 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 SUPERFAMILY SSF53067 3 45 3.24E-19 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 Pfam PF00012 Hsp70 protein 132 234 4.0E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 Gene3D G3DSA:3.30.420.40 89 222 5.7E-23 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 Gene3D G3DSA:3.30.420.40 4 44 5.7E-23 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 Gene3D G3DSA:3.30.420.40 223 245 1.0E-11 T 22-04-2016 SAMA_RS10490 3786753eca5aa2d47b71b425248cd392 450 Gene3D G3DSA:3.30.420.40 379 433 1.0E-11 T 22-04-2016 SAMA_RS01680 1143c4f4cd77770c2bffac8f913894ac 260 Pfam PF08378 Nuclease-related domain 33 146 1.6E-29 T 22-04-2016 IPR011528 Nuclease-related domain, NERD SAMA_RS01680 1143c4f4cd77770c2bffac8f913894ac 260 Gene3D G3DSA:3.30.65.10 218 257 5.9E-8 T 22-04-2016 SAMA_RS01680 1143c4f4cd77770c2bffac8f913894ac 260 SUPERFAMILY SSF57783 218 257 1.0E-6 T 22-04-2016 SAMA_RS01680 1143c4f4cd77770c2bffac8f913894ac 260 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 221 258 1.8E-9 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 SUPERFAMILY SSF55073 364 519 1.41E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 Gene3D G3DSA:3.30.70.270 360 520 6.3E-45 T 22-04-2016 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 SUPERFAMILY SSF158472 170 221 1.12E-5 T 22-04-2016 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 Pfam PF00672 HAMP domain 151 218 5.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 Gene3D G3DSA:3.30.450.20 223 346 3.5E-10 T 22-04-2016 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 SMART SM00304 168 222 4.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 PANTHER PTHR10799:SF774 238 516 8.9E-30 T 22-04-2016 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 353 1.3E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 SMART SM00267 348 521 2.5E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 PANTHER PTHR10799 238 516 8.9E-30 T 22-04-2016 SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 SUPERFAMILY SSF55785 224 346 7.8E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 518 1.2E-36 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 516 3.3E-39 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03100 3e5cb9b91f686aaa108d0b222dab7402 528 Pfam PF13188 PAS domain 237 277 1.5E-4 T 22-04-2016 IPR000014 PAS domain SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 PIRSF PIRSF000445 1 416 2.7E-149 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 SUPERFAMILY SSF69075 313 414 1.83E-23 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 409 8.7E-18 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 PANTHER PTHR21089:SF3 268 355 1.3E-141 T 22-04-2016 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 PANTHER PTHR21089:SF3 28 252 1.3E-141 T 22-04-2016 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 SUPERFAMILY SSF51735 157 311 1.45E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 302 2.5E-48 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 9.2E-52 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 SUPERFAMILY SSF69742 1 154 1.83E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 PANTHER PTHR21089 268 355 1.3E-141 T 22-04-2016 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 PANTHER PTHR21089 28 252 1.3E-141 T 22-04-2016 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 1.6E-140 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 30.739 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS13385 de472573a43d9b096944f9bfc3fce3af 416 Gene3D G3DSA:3.40.50.720 180 353 5.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 PANTHER PTHR10799:SF774 484 901 2.2E-83 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 PANTHER PTHR10799:SF774 14 34 2.2E-83 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Gene3D G3DSA:3.30.70.270 632 796 7.2E-56 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Gene3D G3DSA:3.20.20.450 805 1056 3.6E-93 T 22-04-2016 IPR001633 EAL domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Pfam PF00672 HAMP domain 431 495 5.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Pfam PF00990 Diguanylate cyclase, GGDEF domain 630 787 5.8E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SUPERFAMILY SSF55785 510 617 5.23E-29 T 22-04-2016 IPR000014 PAS domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 630 790 2.8E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SUPERFAMILY SSF55073 635 793 4.79E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SMART SM00267 619 791 1.3E-58 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Pfam PF08376 Nitrate and nitrite sensing 57 271 6.7E-19 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SUPERFAMILY SSF141868 806 1058 3.79E-86 T 22-04-2016 IPR001633 EAL domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SMART SM00091 505 571 5.9E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Pfam PF13426 PAS domain 516 617 5.0E-16 T 22-04-2016 IPR000014 PAS domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SMART SM00086 577 619 2.0E-5 T 22-04-2016 IPR001610 PAC motif SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Gene3D G3DSA:3.30.450.20 514 617 1.1E-27 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 508 625 4.2E-21 T 22-04-2016 IPR000014 PAS domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 PANTHER PTHR10799 484 901 2.2E-83 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 PANTHER PTHR10799 14 34 2.2E-83 T 22-04-2016 SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 Pfam PF00563 EAL domain 807 1043 3.8E-72 T 22-04-2016 IPR001633 EAL domain SAMA_RS00720 a573a75ce197d595d446ded014287d73 1069 SMART SM00052 801 1048 4.2E-108 T 22-04-2016 IPR001633 EAL domain SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 Gene3D G3DSA:1.10.287.180 1 75 2.9E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.6E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 PIRSF PIRSF006092 1 158 7.5E-50 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 PANTHER PTHR30437 1 157 3.5E-66 T 22-04-2016 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 6.1E-55 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 Gene3D G3DSA:3.10.50.30 80 157 4.2E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 31.685 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 SUPERFAMILY SSF46557 3 76 3.79E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 4.4E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS04970 053b418360227469476a49ca7abd39d5 158 SUPERFAMILY SSF54534 82 157 1.31E-23 T 22-04-2016 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 SUPERFAMILY SSF90123 22 339 5.23E-63 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 SMART SM00382 378 558 3.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 PANTHER PTHR24221:SF250 8 594 0.0 T 22-04-2016 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 PANTHER PTHR24221 8 594 0.0 T 22-04-2016 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 SUPERFAMILY SSF52540 344 588 3.72E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 Pfam PF00005 ABC transporter 369 518 8.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 Pfam PF00664 ABC transporter transmembrane region 34 308 8.9E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 Gene3D G3DSA:1.20.1560.10 22 339 8.9E-65 T 22-04-2016 SAMA_RS03490 29c9a7b2861b10b0fac828fed50e1637 594 Gene3D G3DSA:3.40.50.300 354 583 1.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Gene3D G3DSA:3.30.450.20 739 873 7.8E-21 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SMART SM00267 987 1155 3.0E-55 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF55073 1003 1157 6.67E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 999 1151 9.2E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799 1027 1265 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799 721 899 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799 4 21 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Gene3D G3DSA:2.130.10.10 329 508 9.4E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF55785 865 985 3.84E-19 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF07494 Two component regulator propeller 48 71 2.2E-4 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Gene3D G3DSA:3.30.450.20 874 985 1.7E-19 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SMART SM00091 876 943 4.3E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 873 994 3.8E-14 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 800 875 8.8E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF13426 PAS domain 887 985 6.5E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF63829 48 169 3.53E-5 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SMART SM00086 825 868 0.58 T 22-04-2016 IPR001610 PAC motif SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SMART SM00086 945 987 9.4E-4 T 22-04-2016 IPR001610 PAC motif SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Gene3D G3DSA:3.20.20.450 1168 1418 9.0E-96 T 22-04-2016 IPR001633 EAL domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF69304 278 483 1.57E-12 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF69304 102 130 1.57E-12 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF55785 762 871 2.09E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF00563 EAL domain 1173 1405 8.2E-70 T 22-04-2016 IPR001633 EAL domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799:SF657 1027 1265 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799:SF657 721 899 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 PANTHER PTHR10799:SF657 4 21 5.9E-76 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF08447 PAS fold 798 862 9.6E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Gene3D G3DSA:3.30.70.270 1001 1163 2.9E-51 T 22-04-2016 SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SUPERFAMILY SSF141868 1170 1418 7.72E-83 T 22-04-2016 IPR001633 EAL domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 SMART SM00052 1165 1411 5.8E-109 T 22-04-2016 IPR001633 EAL domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 995 1153 2.2E-34 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS11305 862320ee182d05765fce964a9ec39c37 1431 Pfam PF07495 Y_Y_Y domain 647 707 9.5E-15 T 22-04-2016 IPR011123 Two component regulator three Y SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Pfam PF16750 Sensor domain of 2-component histidine kinase 45 151 3.3E-26 T 22-04-2016 IPR031930 2-component histidine kinase, sensor domain SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 456 9.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 SMART SM00388 236 299 4.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 299 1.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Gene3D G3DSA:3.30.565.10 285 456 2.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 SMART SM00304 180 235 2.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 SUPERFAMILY SSF47384 220 299 3.53E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 PANTHER PTHR24423:SF564 174 457 2.4E-59 T 22-04-2016 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 PANTHER PTHR24423 174 457 2.4E-59 T 22-04-2016 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 SMART SM00387 346 458 1.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 SUPERFAMILY SSF55874 289 456 3.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Gene3D G3DSA:1.10.287.130 226 284 3.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS09770 3a7b3ee0a1a2346deb84c1ed632c1476 468 Pfam PF00672 HAMP domain 166 231 4.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 PANTHER PTHR11699 1 452 3.3E-292 T 22-04-2016 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 SUPERFAMILY SSF53720 3 455 3.93E-124 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 Gene3D G3DSA:3.40.309.10 257 443 1.6E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 PANTHER PTHR11699:SF197 1 452 3.3E-292 T 22-04-2016 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 485 1.1E-244 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 Pfam PF00171 Aldehyde dehydrogenase family 9 459 6.4E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 Gene3D G3DSA:3.40.605.10 3 256 1.7E-70 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS15695 1f949dec69eeb3e767d9c1a70665c3a6 486 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 57.905 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 SAMA_RS09260 9779b25103e2b95e0be6c256d74547ca 124 PANTHER PTHR28259 1 121 8.8E-42 T 22-04-2016 SAMA_RS09260 9779b25103e2b95e0be6c256d74547ca 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 19.61 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SAMA_RS09260 9779b25103e2b95e0be6c256d74547ca 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 2.0E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SAMA_RS09260 9779b25103e2b95e0be6c256d74547ca 124 TIGRFAM TIGR00494 crcB: protein CrcB 5 119 1.9E-32 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795 538 848 2.4E-168 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795 142 298 2.4E-168 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795 92 107 2.4E-168 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795 314 491 2.4E-168 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SUPERFAMILY SSF49299 1607 1691 2.55E-5 T 22-04-2016 IPR000601 PKD domain SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Pfam PF02225 PA domain 507 599 1.5E-6 T 22-04-2016 IPR003137 PA domain SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1704 1724 0.0022 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SUPERFAMILY SSF52025 539 613 3.4E-5 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 238 249 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SMART SM00089 1612 1692 3.6E-8 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Gene3D G3DSA:3.40.50.200 628 748 2.9E-77 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Gene3D G3DSA:3.40.50.200 298 468 2.9E-77 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Gene3D G3DSA:3.40.50.200 181 254 2.9E-77 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Gene3D G3DSA:3.50.30.30 504 606 1.1E-5 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 Pfam PF00082 Subtilase family 233 719 1.2E-42 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SUPERFAMILY SSF52743 316 472 1.31E-71 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SUPERFAMILY SSF52743 208 256 1.31E-71 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 SUPERFAMILY SSF52743 632 749 1.31E-71 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795:SF419 538 848 2.4E-168 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795:SF419 142 298 2.4E-168 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795:SF419 92 107 2.4E-168 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PANTHER PTHR10795:SF419 314 491 2.4E-168 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PRINTS PR00723 Subtilisin serine protease family (S8) signature 319 332 3.9E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PRINTS PR00723 Subtilisin serine protease family (S8) signature 233 252 3.9E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PRINTS PR00723 Subtilisin serine protease family (S8) signature 680 696 3.9E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 PIRSF PIRSF037895 5 1725 0.0 T 22-04-2016 SAMA_RS03910 c663fdacc89868909123dcf8e1dd5c84 1725 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 681 691 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 Pfam PF13437 HlyD family secretion protein 181 296 7.8E-13 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 Gene3D G3DSA:2.40.50.100 179 212 9.8E-12 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 Gene3D G3DSA:2.40.50.100 70 103 9.8E-12 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 Pfam PF13533 Biotin-lipoyl like 71 118 3.7E-6 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 PANTHER PTHR30469 1 387 1.1E-89 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 SUPERFAMILY SSF111369 59 281 1.57E-23 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 PANTHER PTHR30469:SF15 1 387 1.1E-89 T 22-04-2016 SAMA_RS14350 edd712dcbc47d95ded3dc2ebf911405a 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 376 2.0E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 SUPERFAMILY SSF48113 17 426 9.87E-151 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 717 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.420.10 305 404 7.2E-47 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.420.10 247 269 7.2E-47 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.520.10 234 246 1.4E-74 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.520.10 429 573 2.4E-49 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.520.10 42 196 1.4E-74 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.520.10 697 717 2.4E-49 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 473 499 1.6E-51 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 262 285 1.6E-51 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 62 87 1.6E-51 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 47 60 1.6E-51 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 21 43 1.6E-51 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PANTHER PTHR30555:SF0 1 717 0.0 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PANTHER PTHR30555 1 717 0.0 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Gene3D G3DSA:1.10.420.10 574 694 8.4E-44 T 22-04-2016 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00458 Haem peroxidase superfamily signature 313 328 7.7E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00458 Haem peroxidase superfamily signature 163 175 7.7E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00458 Haem peroxidase superfamily signature 145 162 7.7E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00458 Haem peroxidase superfamily signature 85 99 7.7E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 PRINTS PR00458 Haem peroxidase superfamily signature 254 269 7.7E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Pfam PF00141 Peroxidase 399 693 6.9E-34 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Pfam PF00141 Peroxidase 64 391 6.3E-51 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 SUPERFAMILY SSF48113 427 717 1.92E-108 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 Hamap MF_01961 Catalase-peroxidase [katG]. 2 718 39.296 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS17040 86e7b8b611285349322f7674ebe0056e 718 ProSitePatterns PS00436 Peroxidases active site signature. 85 96 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 SUPERFAMILY SSF46955 2 118 4.03E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 PANTHER PTHR30204:SF18 1 131 6.4E-51 T 22-04-2016 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 Gene3D G3DSA:1.10.1660.10 1 56 1.4E-27 T 22-04-2016 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 Gene3D G3DSA:1.10.1660.10 57 135 1.9E-29 T 22-04-2016 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 Pfam PF09278 MerR, DNA binding 46 110 3.3E-19 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 SMART SM00422 2 71 3.5E-32 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 Pfam PF00376 MerR family regulatory protein 3 40 3.5E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.7E-65 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 SAMA_RS02150 0931fd71c4552f1dfcf5571f4ae379e6 140 PANTHER PTHR30204 1 131 6.4E-51 T 22-04-2016 SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 SUPERFAMILY SSF51182 13 289 4.15E-66 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 PANTHER PTHR13903:SF4 4 295 6.5E-107 T 22-04-2016 SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 Gene3D G3DSA:2.60.120.10 15 250 2.1E-60 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 Pfam PF05726 Pirin C-terminal cupin domain 187 273 4.7E-18 T 22-04-2016 IPR008778 Pirin, C-terminal domain SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 PIRSF PIRSF006232 5 287 2.1E-67 T 22-04-2016 IPR012093 Pirin SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 PANTHER PTHR13903 4 295 6.5E-107 T 22-04-2016 IPR012093 Pirin SAMA_RS18405 dc19330cbd167596cceec13aac052069 297 Pfam PF02678 Pirin 25 122 1.5E-26 T 22-04-2016 IPR003829 Pirin, N-terminal domain SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.6E-135 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 PANTHER PTHR20919:SF0 2 313 5.4E-158 T 22-04-2016 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 9.8E-140 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 6.0E-150 T 22-04-2016 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 SUPERFAMILY SSF52317 18 297 3.06E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 54.628 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 Gene3D G3DSA:3.40.50.880 34 301 5.0E-121 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 PIRSF PIRSF000450 1 309 1.1E-149 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SAMA_RS07165 1d0b3bc57db3abe07cf65fc051804f58 316 PANTHER PTHR20919 2 313 5.4E-158 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PANTHER PTHR10025 1 284 3.9E-172 T 22-04-2016 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 SUPERFAMILY SSF53223 1 122 3.07E-40 T 22-04-2016 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.7E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.3E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 Gene3D G3DSA:3.40.50.720 140 264 2.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.2E-67 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 SUPERFAMILY SSF51735 123 280 3.58E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 Gene3D G3DSA:3.40.192.10 7 139 2.3E-50 T 22-04-2016 SAMA_RS06395 13dc4c147d857a941e1af2da72d89b23 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.73 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SAMA_RS11995 ca61cbca3cba2e76e4f0ca49de417342 175 Pfam PF03748 Flagellar basal body-associated protein FliL 74 175 1.3E-17 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SAMA_RS11995 ca61cbca3cba2e76e4f0ca49de417342 175 PANTHER PTHR35091:SF1 2 175 2.3E-66 T 22-04-2016 SAMA_RS11995 ca61cbca3cba2e76e4f0ca49de417342 175 PANTHER PTHR35091 2 175 2.3E-66 T 22-04-2016 SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.8E-46 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 PANTHER PTHR33221 2 152 2.9E-65 T 22-04-2016 SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 8.6E-68 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 Gene3D G3DSA:1.10.10.10 1 133 2.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 PANTHER PTHR33221:SF1 2 152 2.9E-65 T 22-04-2016 SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 SUPERFAMILY SSF46785 2 133 7.5E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 Pfam PF02082 Transcriptional regulator 1 83 5.7E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SAMA_RS06765 249526cddb8f11aac995760552d174e1 153 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 2.0E-88 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 PANTHER PTHR10285 1 197 1.8E-96 T 22-04-2016 SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 SUPERFAMILY SSF53271 3 206 3.8E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.4E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.518 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SAMA_RS10960 c6cd9991da812759fe34c7c284800f3a 208 Gene3D G3DSA:3.40.50.2020 2 208 2.4E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS01805 ffde126af62a7739000e52483770a345 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 59.848 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PANTHER PTHR11670 327 470 3.4E-263 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PANTHER PTHR11670 1 307 3.4E-263 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 5.9E-154 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PANTHER PTHR11670:SF38 327 470 3.4E-263 T 22-04-2016 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PANTHER PTHR11670:SF38 1 307 3.4E-263 T 22-04-2016 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 463 3.1E-249 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 Gene3D G3DSA:3.30.499.10 327 463 9.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 Gene3D G3DSA:3.30.499.10 2 151 1.4E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 Gene3D G3DSA:3.40.1060.10 152 288 8.5E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 195 208 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 108 116 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 343 354 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 133 148 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 399 412 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 82 95 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 119 132 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 209 222 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 PRINTS PR00415 Aconitase family signature 286 300 2.3E-48 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01805 ffde126af62a7739000e52483770a345 470 SUPERFAMILY SSF53732 2 468 1.44E-164 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 SUPERFAMILY SSF53335 15 297 1.51E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 Gene3D G3DSA:1.10.8.10 15 106 1.1E-7 T 22-04-2016 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 Pfam PF05175 Methyltransferase small domain 132 217 7.3E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 302 55.517 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 296 6.5E-135 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 Gene3D G3DSA:3.40.50.150 108 291 1.7E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.2E-90 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 PANTHER PTHR18895 4 314 4.4E-172 T 22-04-2016 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 PIRSF PIRSF037167 2 309 1.3E-148 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SAMA_RS11285 71f24c1e6c2479bb33dcbb42afb52c54 314 PANTHER PTHR18895:SF66 4 314 4.4E-172 T 22-04-2016 SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 Gene3D G3DSA:3.40.50.1240 1 153 3.2E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 68 2.6E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 SUPERFAMILY SSF53254 1 150 5.8E-23 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 SMART SM00855 2 116 1.5E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 PANTHER PTHR23029:SF49 1 84 3.9E-19 T 22-04-2016 SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 146 4.3E-36 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SAMA_RS11295 ed284bd3622d4b7aabbe251c66612c11 156 PANTHER PTHR23029 1 84 3.9E-19 T 22-04-2016 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Gene3D G3DSA:2.30.30.30 119 195 6.2E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 SUPERFAMILY SSF50249 2 125 1.85E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 PANTHER PTHR13691 1 274 1.1E-150 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.3E-130 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-33 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.301 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 SMART SM01382 124 252 1.9E-93 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.2E-57 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 PIRSF PIRSF002158 13 274 2.0E-99 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 SUPERFAMILY SSF50104 126 272 4.57E-62 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 SMART SM01383 42 118 2.3E-46 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Gene3D G3DSA:4.10.950.10 196 273 6.8E-36 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 SAMA_RS01140 011c2430bdf2b0acb186e77a02dc685b 274 Gene3D G3DSA:2.40.50.140 1 114 3.3E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PANTHER PTHR23359 1 214 3.3E-112 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.516 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 Gene3D G3DSA:3.40.50.300 1 212 1.5E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.3E-16 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 SUPERFAMILY SSF52540 1 209 3.26E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.5E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.0E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.0E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.0E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.0E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.0E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 Pfam PF00406 Adenylate kinase 5 184 1.2E-57 T 22-04-2016 SAMA_RS06870 31bbd5ed1df10008033177c8827e2a44 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 SUPERFAMILY SSF53850 90 277 3.62E-25 T 22-04-2016 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 Pfam PF03466 LysR substrate binding domain 91 276 1.0E-23 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 Gene3D G3DSA:1.10.10.10 1 79 9.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 Gene3D G3DSA:3.40.190.10 90 167 2.9E-4 T 22-04-2016 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 Gene3D G3DSA:3.40.190.10 168 251 9.9E-17 T 22-04-2016 SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 SUPERFAMILY SSF46785 1 83 3.37E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14620 3329b44352db1d7575f83ceb6b1c5591 278 PANTHER PTHR30346 1 276 6.9E-53 T 22-04-2016 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 Pfam PF00072 Response regulator receiver domain 5 112 9.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 SMART SM00448 3 115 4.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 SUPERFAMILY SSF52172 4 118 5.55E-29 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 PANTHER PTHR26402 3 117 1.7E-31 T 22-04-2016 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 PANTHER PTHR26402:SF547 3 117 1.7E-31 T 22-04-2016 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 SUPERFAMILY SSF103039 140 330 2.18E-44 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 Gene3D G3DSA:3.40.50.2300 4 118 1.2E-26 T 22-04-2016 SAMA_RS16355 fd2f5229750ca5dcdf5726694b66fb84 335 Gene3D G3DSA:3.40.1550.10 138 331 1.6E-38 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 248 271 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 293 313 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 217 234 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 496 515 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 43 61 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PRINTS PR01607 Apyrase family signature 427 450 2.5E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 Pfam PF00149 Calcineurin-like phosphoesterase 45 265 1.4E-19 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 SUPERFAMILY SSF55816 373 551 3.4E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 Gene3D G3DSA:3.90.780.10 373 550 1.2E-46 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PANTHER PTHR11575 33 559 2.8E-206 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 522 3.0E-33 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 PANTHER PTHR11575:SF27 33 559 2.8E-206 T 22-04-2016 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 SUPERFAMILY SSF56300 41 372 3.04E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SAMA_RS10545 be768af8551c83765d32e18c10b331a2 571 Gene3D G3DSA:3.60.21.10 42 371 7.0E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS07250 b6180c81fbb983adcbf9d4343d33fa0c 197 Gene3D G3DSA:3.40.50.360 1 176 3.2E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS07250 b6180c81fbb983adcbf9d4343d33fa0c 197 PANTHER PTHR10204:SF42 1 176 3.8E-53 T 22-04-2016 SAMA_RS07250 b6180c81fbb983adcbf9d4343d33fa0c 197 SUPERFAMILY SSF52218 1 177 5.18E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS07250 b6180c81fbb983adcbf9d4343d33fa0c 197 PANTHER PTHR10204 1 176 3.8E-53 T 22-04-2016 SAMA_RS07250 b6180c81fbb983adcbf9d4343d33fa0c 197 Pfam PF02525 Flavodoxin-like fold 3 171 5.7E-39 T 22-04-2016 IPR003680 Flavodoxin-like fold SAMA_RS11480 34d412fdf4d7f015572d9506e961faea 192 PANTHER PTHR13194:SF7 25 191 9.3E-30 T 22-04-2016 SAMA_RS11480 34d412fdf4d7f015572d9506e961faea 192 SUPERFAMILY SSF49785 27 191 8.08E-24 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS11480 34d412fdf4d7f015572d9506e961faea 192 PANTHER PTHR13194 25 191 9.3E-30 T 22-04-2016 SAMA_RS11480 34d412fdf4d7f015572d9506e961faea 192 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 30 184 1.6E-35 T 22-04-2016 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 PANTHER PTHR33221:SF4 2 140 4.1E-71 T 22-04-2016 SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 Pfam PF02082 Transcriptional regulator 1 83 1.2E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 SUPERFAMILY SSF46785 2 134 2.44E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 PANTHER PTHR33221 2 140 4.1E-71 T 22-04-2016 SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.3E-29 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 Gene3D G3DSA:1.10.10.10 1 139 6.6E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00285 8796f97f1c2148af6bbb363aac130b3c 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 SUPERFAMILY SSF52172 1 170 1.1E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 SMART SM00862 145 219 1.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 Gene3D G3DSA:3.40.50.2300 1 119 2.9E-35 T 22-04-2016 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 Gene3D G3DSA:1.10.10.10 125 220 1.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 SMART SM00448 1 112 3.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 PANTHER PTHR26402:SF537 1 220 6.7E-136 T 22-04-2016 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 PANTHER PTHR26402 1 220 6.7E-136 T 22-04-2016 SAMA_RS08040 1ea0698a3495356495eb95ce7e4fb6d0 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 1.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 PANTHER PTHR11071:SF192 3 192 1.0E-61 T 22-04-2016 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 SUPERFAMILY SSF50891 30 191 1.33E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 Gene3D G3DSA:2.40.100.10 30 191 3.3E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 PANTHER PTHR11071 3 192 1.0E-61 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 66 83 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 32 184 6.5E-39 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 1.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 1.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS13320 96f991dbe55cde6ddbf7507f2646d1e4 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 1.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 SMART SM00862 153 226 3.7E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 PANTHER PTHR26402:SF476 2 226 1.3E-98 T 22-04-2016 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 2 228 2.3E-124 T 22-04-2016 IPR022305 Sortase system response regulator SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 PANTHER PTHR26402 2 226 1.3E-98 T 22-04-2016 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 SMART SM00448 2 115 5.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 SUPERFAMILY SSF52172 1 182 4.83E-32 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 Pfam PF00072 Response regulator receiver domain 4 115 2.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 Gene3D G3DSA:3.40.50.2300 1 132 2.2E-30 T 22-04-2016 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 225 8.5E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS10465 22a68ff0d9ce389febd1274c5b643d7d 231 Gene3D G3DSA:1.10.10.10 133 228 9.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 18 589 1.0E-242 T 22-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 Pfam PF00005 ABC transporter 369 518 4.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 PANTHER PTHR24221 22 593 1.9E-215 T 22-04-2016 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 Gene3D G3DSA:3.40.50.300 352 582 8.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 SUPERFAMILY SSF90123 22 330 4.71E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 Gene3D G3DSA:1.20.1560.10 22 329 1.5E-72 T 22-04-2016 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 Pfam PF00664 ABC transporter transmembrane region 35 301 3.5E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 SUPERFAMILY SSF52540 343 589 1.47E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15190 52c6249c8676218195da1dbe88908107 593 SMART SM00382 378 558 5.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 PANTHER PTHR33603:SF1 1 155 3.2E-72 T 22-04-2016 SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.365 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.0E-48 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 PANTHER PTHR33603 1 155 3.2E-72 T 22-04-2016 SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 Gene3D G3DSA:3.40.1280.10 1 155 3.2E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 SUPERFAMILY SSF75217 1 154 3.51E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 7.7E-77 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS13515 5cef52fbbafcd955164e108bcddfbbcc 156 PIRSF PIRSF004505 1 155 1.1E-42 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS17930 4971ea2582ab33817aebfe627d950e87 209 PANTHER PTHR21392 3 197 5.1E-44 T 22-04-2016 SAMA_RS17930 4971ea2582ab33817aebfe627d950e87 209 Pfam PF03942 DTW domain 3 187 4.7E-47 T 22-04-2016 IPR005636 DTW SAMA_RS17930 4971ea2582ab33817aebfe627d950e87 209 SMART SM01144 2 192 2.7E-67 T 22-04-2016 IPR005636 DTW SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 Pfam PF00990 Diguanylate cyclase, GGDEF domain 417 574 4.6E-39 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 Gene3D G3DSA:1.25.40.10 68 389 1.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 SUPERFAMILY SSF48452 127 351 1.64E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 SUPERFAMILY SSF55073 422 579 5.41E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 Gene3D G3DSA:3.30.70.270 419 580 5.9E-49 T 22-04-2016 SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 PANTHER PTHR10799:SF686 450 575 1.1E-22 T 22-04-2016 SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 SMART SM00267 406 578 6.2E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 414 576 5.8E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS04110 dcc59c7977ab2eb82fa5363a3ed72408 592 PANTHER PTHR10799 450 575 1.1E-22 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 PANTHER PTHR12147:SF16 1 184 6.1E-129 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 PANTHER PTHR12147 1 184 6.1E-129 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 PANTHER PTHR12147:SF16 224 515 6.1E-129 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 SUPERFAMILY SSF53187 13 60 5.19E-59 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 SUPERFAMILY SSF53187 262 497 5.19E-59 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 Pfam PF04389 Peptidase family M28 278 471 6.0E-41 T 22-04-2016 IPR007484 Peptidase M28 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 Gene3D G3DSA:3.40.630.10 14 66 2.4E-57 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 Gene3D G3DSA:3.40.630.10 263 504 2.4E-57 T 22-04-2016 SAMA_RS05765 4277e31020de4bd624dc58e0f7c35d2a 517 PANTHER PTHR12147 224 515 6.1E-129 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Gene3D G3DSA:1.10.287.950 594 798 3.4E-63 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PANTHER PTHR32089:SF63 185 829 3.7E-160 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Gene3D G3DSA:3.30.450.20 116 230 5.0E-5 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SUPERFAMILY SSF55785 354 473 2.27E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SMART SM00283 579 826 2.6E-97 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Gene3D G3DSA:3.30.450.20 232 349 6.6E-7 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Pfam PF13426 PAS domain 118 220 0.0052 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Pfam PF13426 PAS domain 249 349 0.24 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 639 822 2.8E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SUPERFAMILY SSF58104 546 827 6.41E-74 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SMART SM00091 105 174 220.0 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SMART SM00091 236 308 12.0 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SMART SM00091 366 431 1.7 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PANTHER PTHR32089 185 829 3.7E-160 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 SUPERFAMILY SSF55785 224 349 1.33E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Gene3D G3DSA:3.30.450.20 354 473 8.6E-9 T 22-04-2016 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 Pfam PF13188 PAS domain 366 417 0.0079 T 22-04-2016 IPR000014 PAS domain SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 600 629 2.86E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 677 704 2.86E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 706 735 2.86E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS18185 f00ccd16485bdd286c3b0aa00ef4b6c9 860 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 754 783 2.86E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13915 7938c7bda919fd76b3eb09d31dfeba6d 183 Pfam PF04205 FMN-binding domain 95 172 1.9E-10 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS13915 7938c7bda919fd76b3eb09d31dfeba6d 183 SMART SM00900 94 175 3.0E-13 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 PANTHER PTHR11601:SF45 4 404 3.1E-233 T 22-04-2016 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 Gene3D G3DSA:3.40.640.10 17 253 4.6E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 Pfam PF00266 Aminotransferase class-V 5 368 1.8E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 SUPERFAMILY SSF53383 5 390 1.24E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 Gene3D G3DSA:3.90.1150.10 254 374 6.5E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 PANTHER PTHR11601 4 404 3.1E-233 T 22-04-2016 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 PIRSF PIRSF005572 2 384 2.2E-132 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 6.9E-228 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SAMA_RS06770 1d093a87b0743c614e10057a06bcb4ee 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.32 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SAMA_RS05200 d1bd1d9abdcf98c44804dd73c3012757 209 Pfam PF06197 Protein of unknown function (DUF998) 25 200 4.3E-9 T 22-04-2016 IPR009339 Protein of unknown function DUF998 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 SUPERFAMILY SSF55831 1 264 1.44E-130 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PANTHER PTHR11548 1 264 1.0E-192 T 22-04-2016 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.0E-43 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.3E-93 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 Pfam PF00303 Thymidylate synthase 2 264 8.5E-124 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 Gene3D G3DSA:3.30.572.10 1 264 5.3E-135 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.67 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS04535 260fe8eff6f7b635c2d449f572416cfb 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 PANTHER PTHR22683:SF41 422 924 1.1E-299 T 22-04-2016 SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 Pfam PF09397 Ftsk gamma domain 862 922 2.8E-27 T 22-04-2016 IPR018541 FtsK gamma domain SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 SMART SM00843 860 925 1.7E-41 T 22-04-2016 IPR018541 FtsK gamma domain SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 SUPERFAMILY SSF46785 860 925 4.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 16 184 1.3E-37 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 Gene3D G3DSA:3.40.50.300 514 821 1.3E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 PANTHER PTHR22683 422 924 1.1E-299 T 22-04-2016 SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 SUPERFAMILY SSF52540 515 824 6.98E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09245 5893477c287beb4bab1e6ab4e4ca3985 928 Pfam PF01580 FtsK/SpoIIIE family 542 754 1.6E-68 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1717 1737 1.9E-4 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PRINTS PR00723 Subtilisin serine protease family (S8) signature 684 700 1.6E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PRINTS PR00723 Subtilisin serine protease family (S8) signature 231 250 1.6E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PRINTS PR00723 Subtilisin serine protease family (S8) signature 325 338 1.6E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 236 247 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795:SF419 142 297 2.4E-147 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795:SF419 536 857 2.4E-147 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795:SF419 320 500 2.4E-147 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Gene3D G3DSA:2.60.40.670 1623 1700 2.9E-6 T 22-04-2016 IPR000601 PKD domain SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Gene3D G3DSA:3.40.50.200 300 478 5.8E-74 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Gene3D G3DSA:3.40.50.200 179 252 5.8E-74 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Gene3D G3DSA:3.40.50.200 631 757 5.8E-74 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Gene3D G3DSA:3.50.30.30 501 604 2.1E-7 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SMART SM00089 1618 1703 1.5E-9 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 685 695 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Pfam PF00082 Subtilase family 231 723 2.1E-44 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795 320 500 2.4E-147 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PIRSF PIRSF037895 1 1739 0.0 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 Pfam PF02225 PA domain 512 596 1.6E-6 T 22-04-2016 IPR003137 PA domain SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795 142 297 2.4E-147 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795 536 857 2.4E-147 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SUPERFAMILY SSF49299 1618 1701 1.0E-8 T 22-04-2016 IPR000601 PKD domain SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795:SF419 87 103 2.4E-147 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SUPERFAMILY SSF52025 502 584 2.09E-6 T 22-04-2016 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SUPERFAMILY SSF52743 635 756 1.7E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SUPERFAMILY SSF52743 206 270 1.7E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 SUPERFAMILY SSF52743 322 482 1.7E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS14115 b69d5f518b2a74e1d5624751a378c8ef 1739 PANTHER PTHR10795 87 103 2.4E-147 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 319 1.8E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 SUPERFAMILY SSF55424 337 451 2.75E-32 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 SUPERFAMILY SSF51905 1 366 1.41E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PIRSF PIRSF000350 1 446 1.5E-82 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 Gene3D G3DSA:3.50.50.60 139 328 1.9E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 Gene3D G3DSA:3.50.50.60 3 138 1.3E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PANTHER PTHR22912 1 451 6.5E-246 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-28 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.8E-28 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.8E-28 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.8E-28 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.8E-28 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 5.5E-64 T 22-04-2016 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 Gene3D G3DSA:3.30.390.30 340 451 5.8E-40 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 451 1.3E-213 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 1.6E-31 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SAMA_RS18415 a9885d4ae81bfdd819294f7231aafdb2 451 PANTHER PTHR22912:SF106 1 451 6.5E-246 T 22-04-2016 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 154 240 7.6E-27 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 PANTHER PTHR10516:SF320 124 243 1.2E-51 T 22-04-2016 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 26 146 2.2E-35 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 PANTHER PTHR10516 124 243 1.2E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 SUPERFAMILY SSF54534 37 242 7.66E-61 T 22-04-2016 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 Gene3D G3DSA:3.10.50.40 126 248 8.1E-54 T 22-04-2016 SAMA_RS03405 11dc1c03285a9a25cb10af546ac55991 254 Gene3D G3DSA:1.10.287.460 29 125 1.4E-34 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS10550 fef8a5e186de559517db1aab02598940 226 Pfam PF02230 Phospholipase/Carboxylesterase 10 220 2.5E-55 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SAMA_RS10550 fef8a5e186de559517db1aab02598940 226 SUPERFAMILY SSF53474 5 223 4.12E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10550 fef8a5e186de559517db1aab02598940 226 PANTHER PTHR10655:SF17 11 223 9.8E-80 T 22-04-2016 SAMA_RS10550 fef8a5e186de559517db1aab02598940 226 Gene3D G3DSA:3.40.50.1820 10 222 3.5E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10550 fef8a5e186de559517db1aab02598940 226 PANTHER PTHR10655 11 223 9.8E-80 T 22-04-2016 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.1E-86 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 PANTHER PTHR30606 2 308 9.2E-164 T 22-04-2016 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 PIRSF PIRSF026649 2 306 9.0E-93 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 307 1.5E-133 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 PANTHER PTHR30606:SF5 2 308 9.2E-164 T 22-04-2016 SAMA_RS03840 c79db266937df0035c5a30aba2097fe7 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 307 47.273 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 Pfam PF01380 SIS domain 125 252 5.7E-23 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 Gene3D G3DSA:1.10.10.10 1 80 4.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 SUPERFAMILY SSF53697 92 277 5.13E-40 T 22-04-2016 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 SUPERFAMILY SSF46689 1 80 4.3E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 PANTHER PTHR30514:SF7 1 279 6.1E-192 T 22-04-2016 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 Gene3D G3DSA:3.40.50.10490 96 270 8.9E-39 T 22-04-2016 SAMA_RS09460 dfa1df6171d54aa28a0531275eb32b3f 284 PANTHER PTHR30514 1 279 6.1E-192 T 22-04-2016 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.30.1490.20 687 744 2.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 3.4E-40 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 5.1E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.40.50.1380 938 1071 4.0E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:1.10.1030.10 400 538 1.2E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.30.1490.20 141 199 1.1E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF56059 128 401 3.71E-109 T 22-04-2016 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.164 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PANTHER PTHR11405 1 1072 0.0 T 22-04-2016 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1051 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF56059 673 932 1.17E-104 T 22-04-2016 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF52335 938 1071 5.76E-37 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.2E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.40.50.20 539 662 6.9E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF52440 557 675 1.87E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.30.470.20 200 399 4.7E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.30.470.20 745 931 1.7E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF48108 396 554 2.48E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1070 13.402 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 PANTHER PTHR11405:SF5 1 1072 0.0 T 22-04-2016 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SMART SM01096 424 547 1.9E-76 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Pfam PF02142 MGS-like domain 956 1041 2.4E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SMART SM00851 955 1041 1.5E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Gene3D G3DSA:3.40.50.20 3 108 1.7E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 SUPERFAMILY SSF52440 1 127 5.61E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS13065 c4bb10e45789e074e3a61d640f5d8671 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.6E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 Hamap MF_00186 Glycerol kinase [glpK]. 3 495 57.921 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 2.0E-222 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 SUPERFAMILY SSF53067 254 494 3.76E-83 T 22-04-2016 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 Gene3D G3DSA:3.30.420.40 254 493 4.5E-99 T 22-04-2016 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 7.5E-62 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 1.8E-84 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 SUPERFAMILY SSF53067 5 254 2.16E-96 T 22-04-2016 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 Gene3D G3DSA:3.30.420.40 2 252 1.6E-105 T 22-04-2016 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 PANTHER PTHR10196:SF9 2 494 3.5E-257 T 22-04-2016 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 PIRSF PIRSF000538 3 495 5.1E-176 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS01825 698b8c75680df25b022e28ecc82cde88 495 PANTHER PTHR10196 2 494 3.5E-257 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946 608 860 0.0 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946 880 944 0.0 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946 1 314 0.0 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946 333 570 0.0 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 5.0E-221 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF47323 642 899 4.11E-69 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:3.90.740.10 194 360 1.2E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.263 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF52374 364 571 1.47E-137 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF52374 609 640 1.47E-137 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF52374 1 192 1.47E-137 T 22-04-2016 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF50677 190 365 9.42E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:3.40.50.620 609 630 8.1E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:3.40.50.620 3 193 8.1E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:3.40.50.620 364 571 8.1E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946:SF5 608 860 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946:SF5 880 944 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946:SF5 1 314 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PANTHER PTHR11946:SF5 333 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 SUPERFAMILY SSF46589 884 948 2.09E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 8.7E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 8.7E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 8.7E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 8.7E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 8.7E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 930 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:1.10.287.380 878 946 4.6E-10 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 1.0E-42 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Gene3D G3DSA:1.10.730.10 631 816 1.4E-63 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04145 2d9a07bad7aa3de8f812683ab69437b7 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 948 5.1E-21 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 Pfam PF00932 Lamin Tail Domain 22 128 5.6E-16 T 22-04-2016 IPR001322 Lamin Tail Domain SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 SUPERFAMILY SSF56219 462 830 2.02E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607:SF1 1 473 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607:SF1 493 712 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607:SF1 738 836 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 468 823 3.2E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607 1 473 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607 493 712 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 PANTHER PTHR33607 738 836 7.7E-213 T 22-04-2016 SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 SUPERFAMILY SSF74853 21 89 2.22E-6 T 22-04-2016 IPR001322 Lamin Tail Domain SAMA_RS15375 7e6920c1c7b4d0fb32e4dd7b4a424e37 865 Gene3D G3DSA:3.60.10.10 464 830 4.6E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS18285 51e3f73d8d2796a74bf29f941b5a9e04 186 SUPERFAMILY SSF55729 2 174 7.03E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS18285 51e3f73d8d2796a74bf29f941b5a9e04 186 PANTHER PTHR13256 1 183 3.4E-41 T 22-04-2016 SAMA_RS18285 51e3f73d8d2796a74bf29f941b5a9e04 186 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 4.6E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS18285 51e3f73d8d2796a74bf29f941b5a9e04 186 Gene3D G3DSA:3.40.630.30 3 180 3.3E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS18285 51e3f73d8d2796a74bf29f941b5a9e04 186 PANTHER PTHR13256:SF43 1 183 3.4E-41 T 22-04-2016 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 344 3.6E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Gene3D G3DSA:3.40.50.300 79 345 7.6E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 SMART SM00382 144 329 3.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Gene3D G3DSA:1.10.1140.10 347 461 1.1E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 1.5E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 SUPERFAMILY SSF52540 79 350 5.62E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 SUPERFAMILY SSF47917 347 461 8.89E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 7.7E-258 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 PANTHER PTHR15184 1 461 0.0 T 22-04-2016 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 462 56.548 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 PANTHER PTHR15184:SF44 1 461 0.0 T 22-04-2016 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 SUPERFAMILY SSF50615 1 76 1.05E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18945 2c6bef5e0e7617651bd94e09e1959ba8 462 Gene3D G3DSA:2.40.10.170 1 76 1.1E-28 T 22-04-2016 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 PANTHER PTHR30108:SF2 7 60 8.0E-76 T 22-04-2016 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 PANTHER PTHR30108:SF2 77 213 8.0E-76 T 22-04-2016 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 PANTHER PTHR30108 7 60 8.0E-76 T 22-04-2016 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 PANTHER PTHR30108 77 213 8.0E-76 T 22-04-2016 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 Gene3D G3DSA:3.40.50.1950 6 202 8.0E-72 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 SUPERFAMILY SSF52507 7 201 1.57E-53 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 Pfam PF02441 Flavoprotein 7 146 3.4E-22 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 33.902 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SAMA_RS04045 91dbbfc86a1d14f9bd28f6900a7235c1 213 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 200 7.1E-55 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 PANTHER PTHR30002:SF4 5 382 2.9E-177 T 22-04-2016 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 Gene3D G3DSA:3.30.70.20 198 265 3.7E-5 T 22-04-2016 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 Pfam PF13484 4Fe-4S double cluster binding domain 201 264 2.2E-17 T 22-04-2016 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 SUPERFAMILY SSF46548 147 264 4.87E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 359 6.3E-145 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 PANTHER PTHR30002 5 382 2.9E-177 T 22-04-2016 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 Pfam PF08331 Domain of unknown function (DUF1730) 65 148 1.3E-20 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS13755 942d532cdffe3a351d22ff9d98a672f3 385 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 323 48.125 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 PANTHER PTHR11825:SF2 1 356 4.4E-129 T 22-04-2016 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 PIRSF PIRSF006468 1 359 5.8E-113 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 357 1.5E-100 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 PANTHER PTHR11825 1 356 4.4E-129 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 Gene3D G3DSA:3.20.10.10 175 343 2.0E-48 T 22-04-2016 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 Gene3D G3DSA:3.30.470.10 13 174 2.4E-60 T 22-04-2016 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 SUPERFAMILY SSF56752 23 354 3.92E-92 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS17190 3c8c96e5c697740b389e133800e68d3c 361 Pfam PF01063 Amino-transferase class IV 70 312 5.4E-26 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS16660 b89e5e3a77c1f4c931ad0b70dacafa01 170 PANTHER PTHR14969 1 159 1.0E-26 T 22-04-2016 SAMA_RS16660 b89e5e3a77c1f4c931ad0b70dacafa01 170 Pfam PF01569 PAP2 superfamily 63 166 2.3E-20 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS16660 b89e5e3a77c1f4c931ad0b70dacafa01 170 Gene3D G3DSA:1.20.144.10 5 166 9.1E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS16660 b89e5e3a77c1f4c931ad0b70dacafa01 170 SMART SM00014 59 167 2.8E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS16660 b89e5e3a77c1f4c931ad0b70dacafa01 170 SUPERFAMILY SSF48317 6 166 1.11E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 PANTHER PTHR21234:SF16 1 230 2.4E-50 T 22-04-2016 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 44.411 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 Pfam PF01048 Phosphorylase superfamily 2 212 6.1E-47 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 Gene3D G3DSA:3.40.50.1580 1 229 1.4E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 SUPERFAMILY SSF53167 1 228 1.31E-68 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 6.5E-86 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SAMA_RS04475 e9987c4976c1028d92d0a1c79c61f026 230 PANTHER PTHR21234 1 230 2.4E-50 T 22-04-2016 IPR018017 Nucleoside phosphorylase SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 Pfam PF01467 Cytidylyltransferase-like 346 470 5.7E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 SUPERFAMILY SSF52374 342 471 6.22E-23 T 22-04-2016 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 Pfam PF00294 pfkB family carbohydrate kinase 11 302 1.0E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 SUPERFAMILY SSF53613 11 311 1.39E-59 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 Gene3D G3DSA:3.40.1190.20 12 315 1.7E-67 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.7E-128 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 475 42.815 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 Gene3D G3DSA:3.40.50.620 341 462 6.6E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 PANTHER PTHR10584:SF159 1 336 3.0E-146 T 22-04-2016 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 343 409 6.6E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 PANTHER PTHR10584 1 336 3.0E-146 T 22-04-2016 SAMA_RS03845 e98053898e5e36a99bf8598471bf68ba 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 333 472 2.7E-61 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 Pfam PF00171 Aldehyde dehydrogenase family 10 449 2.0E-90 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 PANTHER PTHR11699 14 479 3.7E-183 T 22-04-2016 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 SUPERFAMILY SSF53720 11 474 1.09E-117 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 PANTHER PTHR11699:SF15 14 479 3.7E-183 T 22-04-2016 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 Gene3D G3DSA:3.40.309.10 238 426 5.7E-54 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 Gene3D G3DSA:3.40.605.10 11 237 1.0E-54 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS14910 c014c3633cb891723122dfd6775250dd 479 PIRSF PIRSF036492 2 479 5.3E-165 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PIRSF PIRSF006431 1 316 1.3E-73 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PANTHER PTHR10992:SF757 10 169 1.1E-38 T 22-04-2016 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PANTHER PTHR10992:SF757 234 315 1.1E-38 T 22-04-2016 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 SUPERFAMILY SSF53474 18 298 1.4E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 38 46 1.4E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 1.4E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 64 75 1.4E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PANTHER PTHR10992 10 169 1.1E-38 T 22-04-2016 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 PANTHER PTHR10992 234 315 1.1E-38 T 22-04-2016 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 Pfam PF00561 alpha/beta hydrolase fold 37 128 2.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS17710 bd5ee560588e6b031cb143efca5d16c6 321 Gene3D G3DSA:3.40.50.1820 13 298 1.3E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS01855 df4b954f143e3f5d315c44972441a36c 103 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 100 8.9E-22 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SAMA_RS01855 df4b954f143e3f5d315c44972441a36c 103 PANTHER PTHR37479:SF1 4 103 2.4E-32 T 22-04-2016 SAMA_RS01855 df4b954f143e3f5d315c44972441a36c 103 Hamap MF_00910 Cell division protein FtsL [ftsL]. 17 100 15.162 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SAMA_RS01855 df4b954f143e3f5d315c44972441a36c 103 PANTHER PTHR37479 4 103 2.4E-32 T 22-04-2016 SAMA_RS01855 df4b954f143e3f5d315c44972441a36c 103 Pfam PF04999 Cell division protein FtsL 7 101 2.8E-34 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.5E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 SUPERFAMILY SSF53732 379 860 1.31E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 SUPERFAMILY SSF52016 162 372 9.02E-71 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.4E-64 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Gene3D G3DSA:3.30.499.10 684 858 3.0E-54 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Gene3D G3DSA:3.20.19.10 163 360 1.3E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 5.5E-98 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 SUPERFAMILY SSF74778 2 160 3.66E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Gene3D G3DSA:3.40.1060.10 520 682 7.3E-86 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 SAMA_RS02075 b864bf7b3e7c2a9b633034b1e5633a31 865 Gene3D G3DSA:3.30.499.10 402 519 7.6E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Gene3D G3DSA:3.40.390.10 296 388 6.3E-18 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SUPERFAMILY SSF49299 747 824 7.19E-15 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Gene3D G3DSA:2.60.40.670 750 826 2.2E-15 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Gene3D G3DSA:2.60.40.670 828 906 5.2E-22 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SUPERFAMILY SSF55486 219 275 2.07E-18 T 22-04-2016 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SUPERFAMILY SSF55486 320 388 2.07E-18 T 22-04-2016 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Pfam PF00801 PKD domain 828 894 3.1E-13 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Pfam PF00801 PKD domain 754 812 6.0E-10 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 123 450 1.2E-74 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 PANTHER PTHR13062:SF10 12 888 8.0E-296 T 22-04-2016 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 PANTHER PTHR13062 12 888 8.0E-296 T 22-04-2016 SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SUPERFAMILY SSF49299 828 905 1.23E-19 T 22-04-2016 IPR000601 PKD domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SMART SM00089 828 905 2.6E-20 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 SMART SM00089 747 826 3.0E-13 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 915 936 0.0022 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS18825 df43026024f35aadd5d243685c619785 938 Pfam PF05547 Immune inhibitor A peptidase M6 113 733 3.9E-167 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 SAMA_RS15710 145ae3008cbd0aa29141c33cccb88760 303 SUPERFAMILY SSF53474 72 302 4.36E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS15710 145ae3008cbd0aa29141c33cccb88760 303 Gene3D G3DSA:3.40.50.1820 66 302 6.1E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS15710 145ae3008cbd0aa29141c33cccb88760 303 Pfam PF07859 alpha/beta hydrolase fold 80 279 1.8E-48 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SAMA_RS15710 145ae3008cbd0aa29141c33cccb88760 303 PANTHER PTHR23024 75 302 1.1E-58 T 22-04-2016 SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 Pfam PF01476 LysM domain 355 396 3.9E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 Gene3D G3DSA:3.10.350.10 354 397 1.7E-16 T 22-04-2016 IPR018392 LysM domain SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 SUPERFAMILY SSF53955 122 266 4.5E-25 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 Gene3D G3DSA:1.10.530.10 121 279 3.3E-27 T 22-04-2016 SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 SMART SM00257 354 398 9.9E-11 T 22-04-2016 IPR018392 LysM domain SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 Pfam PF01464 Transglycosylase SLT domain 136 239 2.4E-19 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 SUPERFAMILY SSF54106 354 397 8.11E-10 T 22-04-2016 IPR018392 LysM domain SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 PANTHER PTHR21666:SF206 79 398 1.9E-80 T 22-04-2016 SAMA_RS19125 58fca5af104c41f15db031f77f49e44e 398 PANTHER PTHR21666 79 398 1.9E-80 T 22-04-2016 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 118 219 1.9E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 PANTHER PTHR34108:SF1 7 222 1.0E-61 T 22-04-2016 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 SUPERFAMILY SSF63848 116 222 9.29E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 96 2.1E-22 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 222 4.5E-64 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 PANTHER PTHR34108 7 222 1.0E-61 T 22-04-2016 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 223 28.043 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SAMA_RS10095 100d091bf9495b2481df07b396da4fee 224 Gene3D G3DSA:2.160.20.70 104 222 3.5E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 Gene3D G3DSA:3.40.50.410 329 501 4.8E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 PANTHER PTHR10338 46 631 1.2E-50 T 22-04-2016 SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 SUPERFAMILY SSF53300 329 500 3.34E-27 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 Pfam PF08487 Vault protein inter-alpha-trypsin domain 46 156 3.9E-27 T 22-04-2016 IPR013694 VIT domain SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 Pfam PF13768 von Willebrand factor type A domain 334 481 2.1E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 SMART SM00327 330 503 3.4E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 SMART SM00609 33 158 3.1E-6 T 22-04-2016 IPR013694 VIT domain SAMA_RS16210 2a7f6b040e385e85c2749e4d7986f02d 713 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 686 705 0.0033 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS03110 25dce74ebca09540810c29b9b41d4440 293 SUPERFAMILY SSF52402 2 133 2.18E-5 T 22-04-2016 SAMA_RS03110 25dce74ebca09540810c29b9b41d4440 293 SUPERFAMILY SSF52402 145 286 2.76E-19 T 22-04-2016 SAMA_RS03110 25dce74ebca09540810c29b9b41d4440 293 Gene3D G3DSA:3.40.50.620 145 284 3.3E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS03110 25dce74ebca09540810c29b9b41d4440 293 Pfam PF00582 Universal stress protein family 164 282 4.0E-12 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 PANTHER PTHR22993 1 269 8.5E-127 T 22-04-2016 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.563 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 SMART SM00898 2 115 2.5E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 1.6E-27 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Gene3D G3DSA:3.20.190.10 2 130 1.8E-39 T 22-04-2016 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Gene3D G3DSA:1.10.8.50 131 270 2.2E-48 T 22-04-2016 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 SUPERFAMILY SSF46946 131 223 1.44E-28 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 SUPERFAMILY SSF57716 218 269 2.54E-15 T 22-04-2016 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 SMART SM01232 130 222 2.8E-45 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 SUPERFAMILY SSF81624 2 139 4.58E-42 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 2.5E-93 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 PANTHER PTHR22993:SF15 1 269 8.5E-127 T 22-04-2016 SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 1.3E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SAMA_RS00590 2edac664abe23ab6095c893a6a304efa 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.1E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SAMA_RS12120 4eae2f4a615e583e8961ef0a9acb6dd2 242 Pfam PF13860 FlgD Ig-like domain 130 193 2.0E-14 T 22-04-2016 IPR025965 FlgD Ig-like domain SAMA_RS12120 4eae2f4a615e583e8961ef0a9acb6dd2 242 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 90 4.4E-21 T 22-04-2016 IPR005648 Flagellar hook capping protein SAMA_RS12120 4eae2f4a615e583e8961ef0a9acb6dd2 242 Pfam PF13861 FlgD Tudor-like domain 100 236 2.2E-16 T 22-04-2016 IPR025963 FlgD Tudor-like domain SAMA_RS12120 4eae2f4a615e583e8961ef0a9acb6dd2 242 PANTHER PTHR30435:SF15 17 215 9.9E-54 T 22-04-2016 SAMA_RS12120 4eae2f4a615e583e8961ef0a9acb6dd2 242 PANTHER PTHR30435 17 215 9.9E-54 T 22-04-2016 SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 PANTHER PTHR10362:SF7 1 515 3.0E-189 T 22-04-2016 SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 Gene3D G3DSA:1.10.275.10 4 206 2.8E-67 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 Pfam PF00221 Aromatic amino acid lyase 19 479 4.1E-160 T 22-04-2016 IPR001106 Aromatic amino acid lyase SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 SUPERFAMILY SSF48557 6 515 3.3E-171 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 PANTHER PTHR10362 1 515 3.0E-189 T 22-04-2016 SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 Gene3D G3DSA:1.20.200.10 207 514 1.4E-95 T 22-04-2016 SAMA_RS17615 11eddcf7848a2381fcf029b98efd1177 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 148 164 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.8E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.795 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 SMART SM00829 12 338 4.4E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 PANTHER PTHR11695:SF285 13 341 1.8E-159 T 22-04-2016 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.3E-179 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 Gene3D G3DSA:3.90.180.10 1 172 2.1E-52 T 22-04-2016 IPR011032 GroES-like SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 Gene3D G3DSA:3.40.50.720 173 287 2.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 SUPERFAMILY SSF50129 1 173 3.04E-54 T 22-04-2016 IPR011032 GroES-like SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 PANTHER PTHR11695 13 341 1.8E-159 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.2E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SAMA_RS00490 add37ed3ef29a95dfd6d3da3bfafe494 341 SUPERFAMILY SSF51735 141 305 1.65E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 295 28.688 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 102 281 1.0E-58 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 284 3.3E-83 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 SUPERFAMILY SSF82866 77 292 8.5E-43 T 22-04-2016 SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 PANTHER PTHR30081 3 315 8.1E-87 T 22-04-2016 SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 4.3E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 4.3E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 4.3E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 4.3E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 Gene3D G3DSA:1.20.1640.10 104 291 2.3E-27 T 22-04-2016 SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 Pfam PF07549 SecD/SecF GG Motif 33 60 3.0E-13 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SAMA_RS11435 9a27f58096bbd22276c8a4b5a120dd47 315 Pfam PF02355 Protein export membrane protein 109 291 1.8E-70 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PANTHER PTHR11390 75 784 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 871 2.7E-21 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF08272 Topoisomerase I zinc-ribbon-like 765 801 1.3E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:2.70.20.10 221 341 1.3E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:2.70.20.10 346 482 9.6E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:3.30.65.10 606 634 3.2E-13 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:3.30.65.10 715 751 3.6E-8 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:3.30.65.10 752 813 1.2E-24 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:1.10.460.10 172 219 3.0E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:1.10.460.10 483 605 3.0E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 731 54.916 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SMART SM00436 141 229 9.1E-50 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SMART SM00493 3 140 1.1E-31 T 22-04-2016 IPR006171 Toprim domain SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 2.2E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 2.2E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 2.2E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 2.2E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 2.2E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SUPERFAMILY SSF56712 3 618 1.57E-201 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:2.20.25.10 816 871 4.2E-30 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SUPERFAMILY SSF57783 709 749 3.4E-5 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 753 7.1E-9 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 607 631 4.6E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF01131 DNA topoisomerase 165 574 5.1E-131 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SUPERFAMILY SSF57783 752 815 6.97E-19 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SUPERFAMILY SSF57783 817 871 2.21E-22 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Gene3D G3DSA:3.40.50.140 1 171 3.4E-57 T 22-04-2016 IPR006171 Toprim domain SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 1.7E-247 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 SMART SM00437 280 536 1.4E-117 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 Pfam PF01751 Toprim domain 5 150 6.8E-32 T 22-04-2016 IPR006171 Toprim domain SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 SAMA_RS06905 21919cdd1b3e3b57f615b29ee226736f 872 PANTHER PTHR11390:SF27 75 784 0.0 T 22-04-2016 SAMA_RS18510 e7b0fdb6703de2a211e5efbcb43db81f 226 SUPERFAMILY SSF53955 92 223 2.03E-44 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS18510 e7b0fdb6703de2a211e5efbcb43db81f 226 Gene3D G3DSA:1.10.530.10 63 223 7.9E-48 T 22-04-2016 SAMA_RS18510 e7b0fdb6703de2a211e5efbcb43db81f 226 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 120 148 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SAMA_RS18510 e7b0fdb6703de2a211e5efbcb43db81f 226 Pfam PF01464 Transglycosylase SLT domain 106 204 1.6E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SAMA_RS18510 e7b0fdb6703de2a211e5efbcb43db81f 226 PANTHER PTHR21666 84 225 5.9E-38 T 22-04-2016 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 6.1E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 6.1E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 SMART SM00419 187 235 1.9E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 PANTHER PTHR24567 9 249 8.5E-121 T 22-04-2016 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 SUPERFAMILY SSF51206 23 162 2.23E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 SMART SM00100 30 151 5.5E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 PANTHER PTHR24567:SF28 9 249 8.5E-121 T 22-04-2016 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 Gene3D G3DSA:1.10.10.10 170 244 8.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.7E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.5E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 Gene3D G3DSA:2.60.120.10 18 169 3.6E-38 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS09380 b0f6cceadc5f44f495154323ddf7714d 250 SUPERFAMILY SSF46785 165 244 3.28E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 PANTHER PTHR21320:SF3 20 177 1.3E-40 T 22-04-2016 SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 PIRSF PIRSF005413 2 187 1.8E-65 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 PANTHER PTHR21320 20 177 1.3E-40 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 172 5.4E-49 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 SUPERFAMILY SSF110111 53 176 6.28E-46 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain SAMA_RS18125 e96e39cdc0d1177b6d8f5507d08e165f 188 Gene3D G3DSA:2.60.370.10 54 177 9.6E-47 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 Pfam PF03466 LysR substrate binding domain 105 283 7.2E-26 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 PANTHER PTHR30579:SF0 13 304 7.9E-73 T 22-04-2016 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 PANTHER PTHR30579 13 304 7.9E-73 T 22-04-2016 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 Gene3D G3DSA:3.40.190.10 202 260 3.2E-11 T 22-04-2016 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 79 6.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 Gene3D G3DSA:1.10.10.10 20 95 8.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 SUPERFAMILY SSF46785 12 123 2.28E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 SUPERFAMILY SSF53850 104 293 5.74E-26 T 22-04-2016 SAMA_RS13950 d93f216b9ffd346a8c50e2966e70e550 307 Gene3D G3DSA:3.40.190.10 105 201 5.6E-12 T 22-04-2016 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 SUPERFAMILY SSF47384 191 265 4.51E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 Gene3D G3DSA:1.10.287.130 201 264 6.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 PANTHER PTHR24423:SF474 149 392 1.9E-15 T 22-04-2016 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 SMART SM00388 208 268 2.4E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 SUPERFAMILY SSF55874 282 383 3.01E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 PANTHER PTHR24423 107 123 1.9E-15 T 22-04-2016 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 PANTHER PTHR24423 149 392 1.9E-15 T 22-04-2016 SAMA_RS00745 e15838d33ee49f2df40eb4236eefd24d 404 PANTHER PTHR24423:SF474 107 123 1.9E-15 T 22-04-2016 SAMA_RS08485 576863d810a30624f554e5902e917233 195 Gene3D G3DSA:1.10.3820.10 15 188 2.6E-27 T 22-04-2016 SAMA_RS08485 576863d810a30624f554e5902e917233 195 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 189 1.1E-76 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SAMA_RS08485 576863d810a30624f554e5902e917233 195 SUPERFAMILY SSF48695 12 195 4.31E-69 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS08485 576863d810a30624f554e5902e917233 195 PANTHER PTHR30333 1 195 2.7E-117 T 22-04-2016 SAMA_RS08485 576863d810a30624f554e5902e917233 195 PIRSF PIRSF000013 1 195 9.8E-108 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SAMA_RS08485 576863d810a30624f554e5902e917233 195 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 5 190 4.9E-101 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 SAMA_RS08485 576863d810a30624f554e5902e917233 195 PANTHER PTHR30333:SF1 1 195 2.7E-117 T 22-04-2016 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 Gene3D G3DSA:3.40.710.10 27 280 1.2E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 PANTHER PTHR21581 13 382 2.1E-156 T 22-04-2016 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 Gene3D G3DSA:2.60.410.10 282 372 8.9E-30 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 8.5E-25 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 SUPERFAMILY SSF69189 282 374 1.43E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 1.4E-93 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 SMART SM00936 282 372 6.0E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 PANTHER PTHR21581:SF4 13 382 2.1E-156 T 22-04-2016 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 2.2E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 2.2E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 2.2E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS13540 978f2a6ddce2bd5b2a7fcd6883897851 392 SUPERFAMILY SSF56601 13 282 1.05E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 418 5.9E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PANTHER PTHR24423:SF354 141 420 4.7E-95 T 22-04-2016 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PANTHER PTHR24423:SF354 20 56 4.7E-95 T 22-04-2016 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 SUPERFAMILY SSF47384 183 269 4.51E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 SMART SM00388 200 269 3.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 SMART SM00387 312 420 2.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 SUPERFAMILY SSF55874 259 416 5.5E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PANTHER PTHR24423 141 420 4.7E-95 T 22-04-2016 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 SMART SM00304 147 199 0.0011 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 Gene3D G3DSA:3.30.565.10 273 416 5.5E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 268 1.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 Gene3D G3DSA:1.10.287.130 190 264 7.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14640 cabe156bf4dd24957a7c425d17b6c899 420 PANTHER PTHR24423 20 56 4.7E-95 T 22-04-2016 SAMA_RS18045 f7e278809bf92ca24f92e5083eb1680d 97 PANTHER PTHR38775:SF1 2 93 1.2E-22 T 22-04-2016 SAMA_RS18045 f7e278809bf92ca24f92e5083eb1680d 97 Pfam PF06611 Protein of unknown function (DUF1145) 3 59 2.6E-17 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 SAMA_RS18045 f7e278809bf92ca24f92e5083eb1680d 97 PANTHER PTHR38775 2 93 1.2E-22 T 22-04-2016 SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.308 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 PANTHER PTHR33279:SF5 8 80 1.0E-47 T 22-04-2016 SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 SUPERFAMILY SSF64307 4 80 3.79E-26 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 PANTHER PTHR33279 8 80 1.0E-47 T 22-04-2016 SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 Gene3D G3DSA:3.30.110.40 5 80 2.5E-30 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS00135 fe3751d977cb53a36f2ee62b0974a520 81 Pfam PF01206 Sulfurtransferase TusA 10 79 2.2E-24 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 Gene3D G3DSA:3.90.1310.10 132 254 3.7E-37 T 22-04-2016 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 605 1.1E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 PANTHER PTHR30627 8 617 9.4E-251 T 22-04-2016 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 PANTHER PTHR30627:SF2 8 617 9.4E-251 T 22-04-2016 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 609 4.6E-235 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 SUPERFAMILY SSF56601 256 609 4.63E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 Gene3D G3DSA:3.40.710.10 255 609 7.0E-102 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 SUPERFAMILY SSF56519 58 255 3.66E-54 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SAMA_RS13520 2e310ad98db160fb93e5d8b960cc87dd 618 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 241 1.8E-42 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SAMA_RS09680 7dcbcafd34d96071d9e18d2e93b7893f 318 Pfam PF14397 Sugar-transfer associated ATP-grasp 19 292 9.1E-115 T 22-04-2016 SAMA_RS09680 7dcbcafd34d96071d9e18d2e93b7893f 318 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 314 1.9E-141 T 22-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein SAMA_RS09680 7dcbcafd34d96071d9e18d2e93b7893f 318 Gene3D G3DSA:3.30.470.20 230 279 6.0E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS09680 7dcbcafd34d96071d9e18d2e93b7893f 318 SUPERFAMILY SSF56059 218 275 3.12E-16 T 22-04-2016 SAMA_RS09680 7dcbcafd34d96071d9e18d2e93b7893f 318 SUPERFAMILY SSF56059 29 174 3.12E-16 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 Pfam PF13247 4Fe-4S dicluster domain 54 166 1.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 PANTHER PTHR11938:SF96 143 179 4.4E-100 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 PANTHER PTHR11938:SF96 1 125 4.4E-100 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 Gene3D G3DSA:3.30.70.20 65 120 7.5E-23 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 PANTHER PTHR11938 143 179 4.4E-100 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 PANTHER PTHR11938 1 125 4.4E-100 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 SUPERFAMILY SSF54862 2 182 5.44E-48 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 Gene3D G3DSA:3.30.70.20 121 180 4.9E-20 T 22-04-2016 SAMA_RS18745 b7264dc1bb3bf7fdaa3f1a19e8b2a1b2 189 Gene3D G3DSA:3.30.70.20 4 64 4.9E-20 T 22-04-2016 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 PANTHER PTHR32089 134 666 5.6E-133 T 22-04-2016 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 SUPERFAMILY SSF103190 109 209 1.1E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 Gene3D G3DSA:1.10.287.950 421 635 3.2E-54 T 22-04-2016 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 664 4.0E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 SUPERFAMILY SSF58104 362 665 3.92E-66 T 22-04-2016 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 5.9E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 5.9E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 SMART SM00283 404 665 1.0E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 Gene3D G3DSA:3.30.450.20 177 307 1.1E-11 T 22-04-2016 SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 Pfam PF17201 Cache 3/Cache 2 fusion domain 33 308 2.6E-66 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain SAMA_RS12270 f6f5f0805c9b5ec9aac161641d69b641 666 PANTHER PTHR32089:SF34 134 666 5.6E-133 T 22-04-2016 SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 PANTHER PTHR12532 1 241 7.9E-118 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Gene3D G3DSA:3.30.1270.10 83 134 1.2E-40 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Gene3D G3DSA:3.30.1270.10 212 247 1.2E-40 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Gene3D G3DSA:3.30.70.980 135 205 3.1E-27 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Pfam PF01709 Transcriptional regulator 5 237 2.2E-91 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 SUPERFAMILY SSF75625 3 246 6.28E-96 T 22-04-2016 IPR029072 YebC-like SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.2E-99 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.482 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS09645 f231425d901a1760934c8374c03f4986 248 Gene3D G3DSA:1.10.10.200 1 80 3.1E-35 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 Pfam PF00288 GHMP kinases N terminal domain 87 153 9.3E-15 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 TIGRFAM TIGR00191 thrB: homoserine kinase 3 310 1.8E-84 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 Gene3D G3DSA:3.30.70.890 172 294 2.3E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PANTHER PTHR20861:SF1 1 314 1.0E-109 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PIRSF PIRSF000676 1 313 1.8E-76 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 Hamap MF_00384 Homoserine kinase [thrB]. 3 309 27.556 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 SUPERFAMILY SSF54211 1 181 1.97E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PRINTS PR00958 Homoserine kinase signature 140 153 3.4E-29 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PRINTS PR00958 Homoserine kinase signature 257 272 3.4E-29 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PRINTS PR00958 Homoserine kinase signature 100 115 3.4E-29 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PRINTS PR00958 Homoserine kinase signature 10 25 3.4E-29 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PRINTS PR00958 Homoserine kinase signature 178 195 3.4E-29 T 22-04-2016 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 Gene3D G3DSA:3.30.230.10 2 165 1.4E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 93 104 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 SUPERFAMILY SSF55060 175 291 2.59E-25 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SAMA_RS04730 72070bd042bdd1706b60bfff98b9614f 314 PANTHER PTHR20861 1 314 1.0E-109 T 22-04-2016 SAMA_RS15610 18c944174670343b487578b91cb204bf 370 Pfam PF06725 3D domain 281 357 7.2E-20 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SAMA_RS15610 18c944174670343b487578b91cb204bf 370 Gene3D G3DSA:2.40.40.10 170 357 7.3E-40 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SAMA_RS15610 18c944174670343b487578b91cb204bf 370 Gene3D G3DSA:2.40.40.10 100 167 1.9E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SAMA_RS15610 18c944174670343b487578b91cb204bf 370 PANTHER PTHR30124:SF0 26 357 8.8E-105 T 22-04-2016 SAMA_RS15610 18c944174670343b487578b91cb204bf 370 Pfam PF03562 MltA specific insert domain 113 261 2.8E-40 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SAMA_RS15610 18c944174670343b487578b91cb204bf 370 PANTHER PTHR30124 26 357 8.8E-105 T 22-04-2016 SAMA_RS15610 18c944174670343b487578b91cb204bf 370 SUPERFAMILY SSF50685 31 357 2.69E-102 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SAMA_RS15610 18c944174670343b487578b91cb204bf 370 SMART SM00925 125 261 7.4E-72 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 204 385 4.3E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 PANTHER PTHR14359:SF20 16 416 6.7E-204 T 22-04-2016 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 17 410 2.2E-153 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 Gene3D G3DSA:3.40.50.1950 17 198 1.8E-64 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 Gene3D G3DSA:3.40.50.10300 202 415 4.0E-87 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 Pfam PF02441 Flavoprotein 21 148 5.1E-33 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 PANTHER PTHR14359 16 416 6.7E-204 T 22-04-2016 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 SUPERFAMILY SSF102645 203 413 2.49E-78 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SAMA_RS01750 e838f6210f88fa5e2836625f74770dfc 417 SUPERFAMILY SSF52507 17 193 8.24E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 SMART SM01027 256 382 7.1E-47 T 22-04-2016 IPR022712 Beta-Casp domain SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 PANTHER PTHR11203:SF11 1 450 1.3E-125 T 22-04-2016 SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 PANTHER PTHR11203 1 450 1.3E-125 T 22-04-2016 SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 Pfam PF10996 Beta-Casp domain 256 382 1.4E-23 T 22-04-2016 IPR022712 Beta-Casp domain SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 SUPERFAMILY SSF56281 2 455 6.28E-123 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 Pfam PF00753 Metallo-beta-lactamase superfamily 13 201 4.0E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 SMART SM00849 15 243 1.3E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 Gene3D G3DSA:3.60.15.10 3 102 5.0E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 Gene3D G3DSA:3.60.15.10 138 270 5.0E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02665 9d5bba8965e59b685994e1d1042b5917 484 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 448 1.9E-14 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 244 49.274 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 PANTHER PTHR36928 1 246 2.3E-100 T 22-04-2016 SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 SUPERFAMILY SSF89550 4 242 6.02E-61 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 Gene3D G3DSA:3.20.20.140 5 236 3.4E-57 T 22-04-2016 SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 SMART SM00481 5 79 2.3E-11 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SAMA_RS11710 fcb520d216a68c19c1f48e06f4ec826e 251 Pfam PF02811 PHP domain 6 124 6.7E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 PANTHER PTHR10160 1 370 1.1E-207 T 22-04-2016 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 SMART SM01002 149 297 3.5E-86 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 Gene3D G3DSA:3.40.50.1770 1 172 7.8E-58 T 22-04-2016 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 Gene3D G3DSA:3.50.50.60 173 202 4.7E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 PIRSF PIRSF000183 1 370 1.9E-152 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 SUPERFAMILY SSF52283 305 360 1.79E-65 T 22-04-2016 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 SUPERFAMILY SSF52283 1 137 1.79E-65 T 22-04-2016 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 SMART SM01003 4 137 7.6E-76 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 SUPERFAMILY SSF51735 137 303 1.21E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 Gene3D G3DSA:3.40.50.1770 203 357 9.2E-27 T 22-04-2016 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.0E-80 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 8.2E-152 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SAMA_RS09235 67cd22f4700dcb933c794d870ac7d309 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.2E-44 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SAMA_RS11375 00bf9078560c6577d80d33074d63f78c 433 SUPERFAMILY SSF56935 23 432 1.42E-87 T 22-04-2016 SAMA_RS11375 00bf9078560c6577d80d33074d63f78c 433 PANTHER PTHR35093 1 433 1.8E-185 T 22-04-2016 SAMA_RS11375 00bf9078560c6577d80d33074d63f78c 433 Gene3D G3DSA:2.40.160.60 22 433 8.0E-114 T 22-04-2016 SAMA_RS11375 00bf9078560c6577d80d33074d63f78c 433 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 432 9.8E-99 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SAMA_RS11375 00bf9078560c6577d80d33074d63f78c 433 PANTHER PTHR35093:SF1 1 433 1.8E-185 T 22-04-2016 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 294 3.4E-32 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 Gene3D G3DSA:1.10.1040.10 167 297 2.6E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 SUPERFAMILY SSF48179 166 296 6.23E-38 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 165 8.0E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 PIRSF PIRSF000103 1 301 3.9E-75 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 SUPERFAMILY SSF51735 2 165 6.94E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 PANTHER PTHR22981 1 295 6.0E-113 T 22-04-2016 SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 Gene3D G3DSA:3.40.50.720 1 166 2.6E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07195 ed200c275b97c37bd7b71633e9679546 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 294 8.3E-123 T 22-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Gene3D G3DSA:1.25.60.10 22 135 4.8E-9 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Pfam PF01769 Divalent cation transporter 329 450 3.5E-23 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 SUPERFAMILY SSF54631 148 284 2.15E-20 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 SUPERFAMILY SSF158791 25 144 7.32E-18 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 SMART SM00924 44 147 8.8E-18 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Gene3D G3DSA:3.10.580.10 147 263 8.2E-12 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Pfam PF00571 CBS domain 212 258 2.1E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 PANTHER PTHR41394 21 447 2.2E-84 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 SUPERFAMILY SSF161093 286 456 1.7E-46 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Pfam PF03448 MgtE intracellular N domain 46 145 2.7E-16 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 PANTHER PTHR41394:SF1 21 447 2.2E-84 T 22-04-2016 SAMA_RS05665 718ed1c7e1197b3bfd4b7057e6805fbf 458 Gene3D G3DSA:1.10.357.20 286 457 1.2E-47 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 SUPERFAMILY SSF54211 303 453 1.44E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 SUPERFAMILY SSF54211 255 269 1.44E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 3.3E-214 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 Pfam PF13481 AAA domain 76 222 6.8E-14 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 213 241 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 10 34 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 174 198 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 124 141 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 248 274 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 322 345 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PRINTS PR01874 DNA repair protein radA signature 83 111 1.5E-92 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 SUPERFAMILY SSF52540 68 288 9.69E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 Gene3D G3DSA:3.40.50.300 60 277 3.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 430 2.7E-8 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 SMART SM00382 91 245 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 PANTHER PTHR32472 1 454 5.4E-221 T 22-04-2016 SAMA_RS05125 1a5a8ea3a33d5a14e4c4a5abb0342f88 454 Gene3D G3DSA:3.30.230.10 284 453 9.2E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS10125 40862129871791802f0eb90518d5a832 270 SUPERFAMILY SSF53335 39 220 7.11E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10125 40862129871791802f0eb90518d5a832 270 Gene3D G3DSA:3.40.50.150 51 229 1.0E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10125 40862129871791802f0eb90518d5a832 270 PIRSF PIRSF031679 1 268 2.1E-98 T 22-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted SAMA_RS16860 d4ea46ef30c0158ab04f404a248ee680 299 Pfam PF01904 Protein of unknown function DUF72 13 264 3.7E-58 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SAMA_RS16860 d4ea46ef30c0158ab04f404a248ee680 299 PANTHER PTHR30348 2 280 1.7E-60 T 22-04-2016 SAMA_RS16860 d4ea46ef30c0158ab04f404a248ee680 299 PANTHER PTHR30348:SF3 2 280 1.7E-60 T 22-04-2016 SAMA_RS16860 d4ea46ef30c0158ab04f404a248ee680 299 SUPERFAMILY SSF117396 1 266 1.03E-63 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SAMA_RS16860 d4ea46ef30c0158ab04f404a248ee680 299 Gene3D G3DSA:3.20.20.410 1 274 1.9E-64 T 22-04-2016 IPR002763 Protein of unknown function DUF72 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 SMART SM00984 317 417 3.8E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 PANTHER PTHR11374 5 423 5.3E-224 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 415 2.5E-20 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 SUPERFAMILY SSF48179 201 292 2.55E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 PANTHER PTHR11374:SF25 5 423 5.3E-224 T 22-04-2016 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 SUPERFAMILY SSF52413 300 415 5.62E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 SUPERFAMILY SSF51735 7 191 1.06E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 1.1E-23 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 Gene3D G3DSA:3.40.50.720 4 222 3.3E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 PIRSF PIRSF500136 1 423 1.2E-142 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 Gene3D G3DSA:3.40.50.720 233 415 9.9E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 412 2.5E-113 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 PIRSF PIRSF000124 6 414 1.2E-46 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SAMA_RS11840 690a85065bff89f88ae4f5e9171f0c6f 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 179 4.2E-31 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 1.4E-98 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 Gene3D G3DSA:3.40.50.300 5 224 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 SMART SM00382 34 222 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 SUPERFAMILY SSF52540 5 224 1.22E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 PANTHER PTHR24220:SF111 7 224 9.9E-117 T 22-04-2016 SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 PANTHER PTHR24220 7 224 9.9E-117 T 22-04-2016 SAMA_RS06960 c9c51745535e0c7cd26945380803af6e 229 Pfam PF00005 ABC transporter 27 173 8.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS01815 08110f6d330cf2f5adece258e8d9a394 450 PANTHER PTHR35093:SF2 1 450 5.5E-113 T 22-04-2016 SAMA_RS01815 08110f6d330cf2f5adece258e8d9a394 450 Gene3D G3DSA:2.40.160.60 24 449 3.9E-120 T 22-04-2016 SAMA_RS01815 08110f6d330cf2f5adece258e8d9a394 450 PANTHER PTHR35093 1 450 5.5E-113 T 22-04-2016 SAMA_RS01815 08110f6d330cf2f5adece258e8d9a394 450 SUPERFAMILY SSF56935 24 449 3.62E-100 T 22-04-2016 SAMA_RS01815 08110f6d330cf2f5adece258e8d9a394 450 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 449 8.5E-113 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SAMA_RS17550 306ba06b7c255e4974b292dac125b448 197 PANTHER PTHR40278:SF1 1 194 8.6E-53 T 22-04-2016 SAMA_RS17550 306ba06b7c255e4974b292dac125b448 197 PANTHER PTHR40278 1 194 8.6E-53 T 22-04-2016 SAMA_RS17550 306ba06b7c255e4974b292dac125b448 197 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 2.3E-20 T 22-04-2016 IPR007813 Fimbrial assembly PilN SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 SUPERFAMILY SSF57829 421 459 4.58E-6 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 SMART SM00490 266 344 1.2E-10 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 SMART SM00487 1 178 6.6E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031 1 163 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031 233 366 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031 402 578 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031 187 197 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 SUPERFAMILY SSF52540 219 353 1.75E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 SUPERFAMILY SSF52540 22 156 1.75E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 Pfam PF00271 Helicase conserved C-terminal domain 249 342 3.1E-11 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 Gene3D G3DSA:3.40.50.300 237 354 1.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 2.7E-21 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031:SF319 1 163 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031:SF319 233 366 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031:SF319 402 578 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 PANTHER PTHR24031:SF319 187 197 7.4E-156 T 22-04-2016 SAMA_RS10840 769d6233d354f50c09922d2950d55a2b 578 Gene3D G3DSA:3.40.50.300 3 155 7.0E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 PRINTS PR00313 NodO calcium binding signature 4020 4031 1.4E-5 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 PRINTS PR00313 NodO calcium binding signature 4059 4068 1.4E-5 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 PRINTS PR00313 NodO calcium binding signature 4050 4058 1.4E-5 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 PRINTS PR00313 NodO calcium binding signature 4041 4049 1.4E-5 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SUPERFAMILY SSF51120 3812 3840 1.18E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SUPERFAMILY SSF51120 4003 4122 1.18E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SUPERFAMILY SSF51120 3931 3961 1.18E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 Pfam PF03160 Calx-beta domain 3381 3431 18.0 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 Pfam PF03160 Calx-beta domain 348 435 0.032 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 Pfam PF03160 Calx-beta domain 236 320 9.1E-7 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4076 4160 6.6E-18 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2746 2758 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2011 2023 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2116 2128 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2221 2233 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1906 1918 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2641 2653 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2326 2338 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2431 2443 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2536 2548 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SUPERFAMILY SSF141072 359 465 3.66E-9 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4028 4046 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4037 4055 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SUPERFAMILY SSF141072 236 341 2.09E-17 T 22-04-2016 SAMA_RS16960 54da2eabf6b074da112b2d7d8aafc036 4194 SMART SM00237 227 320 3.4E-5 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.7E-49 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.0E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 PANTHER PTHR33175:SF5 1 91 7.0E-49 T 22-04-2016 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 PANTHER PTHR33175 1 91 7.0E-49 T 22-04-2016 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.989 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 SUPERFAMILY SSF47729 1 91 3.24E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 SMART SM00411 1 91 1.5E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS09055 522b8c267cf4bdcc4c8dd3d567526a5c 95 Gene3D G3DSA:4.10.520.10 1 91 1.8E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 4.7E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.9E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.9E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 Gene3D G3DSA:1.10.357.10 2 192 6.6E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 183 1.2E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 PANTHER PTHR30055:SF20 1 193 2.6E-72 T 22-04-2016 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 SUPERFAMILY SSF48498 81 193 4.45E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 SUPERFAMILY SSF46689 2 74 2.72E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS02555 f7b256b658466fe980d076e5376e262d 196 PANTHER PTHR30055 1 193 2.6E-72 T 22-04-2016 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 Gene3D G3DSA:3.30.70.120 1 112 3.6E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PRINTS PR00340 P-II protein signature 52 75 1.086319E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PRINTS PR00340 P-II protein signature 83 103 1.086319E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PRINTS PR00340 P-II protein signature 23 41 1.086319E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PRINTS PR00340 P-II protein signature 2 17 1.086319E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 SMART SM00938 4 105 8.6E-64 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PANTHER PTHR30115 1 112 2.4E-70 T 22-04-2016 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.4E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 SUPERFAMILY SSF54913 1 112 2.19E-43 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PANTHER PTHR30115:SF15 1 112 2.4E-70 T 22-04-2016 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 PIRSF PIRSF039144 1 112 2.3E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS03450 ebd9c34cea8965db8c4494e9fc1d78c5 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Pfam PF03572 Peptidase family S41 880 1035 5.1E-27 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 PANTHER PTHR32060 16 61 1.1E-272 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 PANTHER PTHR32060 77 1078 1.1E-272 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 57 91 0.0066 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 482 512 3.9E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Pfam PF14684 Tricorn protease C1 domain 682 751 3.1E-27 T 22-04-2016 IPR028204 Tricorn protease C1 domain SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Gene3D G3DSA:2.30.42.10 764 853 3.7E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF50156 765 852 6.12E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Gene3D G3DSA:3.90.226.10 861 1066 3.2E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Gene3D G3DSA:2.130.10.10 315 663 4.8E-56 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Gene3D G3DSA:3.30.750.44 680 751 3.0E-30 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SMART SM00245 831 1036 2.8E-7 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF52096 681 759 2.65E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF52096 853 1061 2.65E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Gene3D G3DSA:2.120.10.60 23 288 3.2E-45 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 Pfam PF14685 Tricorn protease PDZ domain 765 849 4.0E-17 T 22-04-2016 IPR029414 Tricorn protease, PDZ domain SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 PIRSF PIRSF036421 19 1068 7.5E-304 T 22-04-2016 IPR012393 Tricorn protease GO:0008236 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 PANTHER PTHR32060:SF12 16 61 1.1E-272 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 PANTHER PTHR32060:SF12 77 1078 1.1E-272 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF82171 573 647 9.02E-30 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF82171 262 540 9.02E-30 T 22-04-2016 SAMA_RS12620 c783e6fc9e06cac7118f7a714fe51f22 1084 SUPERFAMILY SSF69304 29 289 1.7E-32 T 22-04-2016 SAMA_RS00170 56769a25b2afaaf742b48fe5159f4032 177 SUPERFAMILY SSF52218 1 164 4.03E-30 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00170 56769a25b2afaaf742b48fe5159f4032 177 PANTHER PTHR38030:SF2 1 173 4.6E-64 T 22-04-2016 SAMA_RS00170 56769a25b2afaaf742b48fe5159f4032 177 Gene3D G3DSA:3.40.50.360 1 173 2.2E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00170 56769a25b2afaaf742b48fe5159f4032 177 Pfam PF12724 Flavodoxin domain 5 151 1.8E-51 T 22-04-2016 IPR026816 Flavodoxin domain SAMA_RS00170 56769a25b2afaaf742b48fe5159f4032 177 PANTHER PTHR38030 1 173 4.6E-64 T 22-04-2016 SAMA_RS00510 02f2e0b994d8052570f6ebf9c3d2c196 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 234 1.3E-56 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 SAMA_RS00510 02f2e0b994d8052570f6ebf9c3d2c196 237 Gene3D G3DSA:1.10.510.10 150 216 4.0E-10 T 22-04-2016 SAMA_RS00510 02f2e0b994d8052570f6ebf9c3d2c196 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 236 29.618 T 22-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 SAMA_RS00510 02f2e0b994d8052570f6ebf9c3d2c196 237 SUPERFAMILY SSF56112 43 236 1.37E-15 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 SUPERFAMILY SSF50475 3 322 3.49E-124 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 SUPERFAMILY SSF143968 323 487 1.03E-68 T 22-04-2016 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.2E-170 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 PANTHER PTHR30108 1 493 4.9E-270 T 22-04-2016 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 Gene3D G3DSA:3.40.1670.10 337 454 1.7E-54 T 22-04-2016 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.9E-175 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 74.493 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 PANTHER PTHR30108:SF1 1 493 4.9E-270 T 22-04-2016 SAMA_RS02300 5b5251eedf3164c75d60ab6e62dc85e0 493 Gene3D G3DSA:1.20.5.570 455 488 1.2E-18 T 22-04-2016 SAMA_RS11685 a576e32c1d375582ad030a50d0a9c516 755 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 85 750 6.2E-104 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC SAMA_RS11685 a576e32c1d375582ad030a50d0a9c516 755 Gene3D G3DSA:1.10.3820.10 231 380 1.3E-14 T 22-04-2016 SAMA_RS11685 a576e32c1d375582ad030a50d0a9c516 755 Gene3D G3DSA:1.10.3820.10 546 739 2.4E-10 T 22-04-2016 SAMA_RS11685 a576e32c1d375582ad030a50d0a9c516 755 SUPERFAMILY SSF48695 232 400 2.17E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS11685 a576e32c1d375582ad030a50d0a9c516 755 SUPERFAMILY SSF48695 552 738 2.17E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 3.5E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 SUPERFAMILY SSF52833 2 108 2.38E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PANTHER PTHR10438:SF256 5 100 3.0E-39 T 22-04-2016 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PANTHER PTHR10438 5 100 3.0E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 Pfam PF00085 Thioredoxin 5 106 3.6E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 Gene3D G3DSA:3.40.30.10 2 107 2.9E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PIRSF PIRSF000077 2 108 2.7E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.7E-10 T 22-04-2016 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.7E-10 T 22-04-2016 SAMA_RS16750 512837f0ff85aa707a737e63b3c696af 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.7E-10 T 22-04-2016 SAMA_RS09815 942242f5bcd518689c391bf9f5019631 815 SUPERFAMILY SSF55486 35 200 3.52E-13 T 22-04-2016 SAMA_RS09815 942242f5bcd518689c391bf9f5019631 815 SUPERFAMILY SSF55486 248 280 3.52E-13 T 22-04-2016 SAMA_RS09815 942242f5bcd518689c391bf9f5019631 815 Gene3D G3DSA:3.40.390.10 54 207 2.6E-12 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS09815 942242f5bcd518689c391bf9f5019631 815 SUPERFAMILY SSF50998 517 650 4.24E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 PIRSF PIRSF001455 3 357 3.2E-109 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 Gene3D G3DSA:3.40.50.1970 2 172 4.2E-69 T 22-04-2016 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.774 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 2.0E-122 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 Gene3D G3DSA:1.20.1090.10 173 357 8.3E-70 T 22-04-2016 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 PANTHER PTHR21090 1 358 5.8E-205 T 22-04-2016 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 SUPERFAMILY SSF56796 4 357 6.28E-118 T 22-04-2016 SAMA_RS17525 a494dad4001ee9109506c9f77abfed0f 359 Pfam PF01761 3-dehydroquinate synthase 67 325 1.8E-112 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 SUPERFAMILY SSF50447 205 301 1.49E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 SUPERFAMILY SSF50465 298 393 6.91E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.3E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.11 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PANTHER PTHR23115:SF151 1 392 3.5E-293 T 22-04-2016 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Gene3D G3DSA:2.40.30.10 212 298 1.6E-36 T 22-04-2016 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Gene3D G3DSA:2.40.30.10 300 392 8.8E-47 T 22-04-2016 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 SUPERFAMILY SSF52540 6 219 1.68E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 PANTHER PTHR23115 1 392 3.5E-293 T 22-04-2016 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.3E-233 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Gene3D G3DSA:3.40.50.300 5 211 7.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.4E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS01115 3825dc27ebbdef0088a552b670beb0d9 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-60 T 22-04-2016 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 PANTHER PTHR10091 1 340 5.4E-132 T 22-04-2016 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 PIRSF PIRSF005096 1 340 1.9E-121 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 Pfam PF01263 Aldose 1-epimerase 20 335 3.0E-68 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 SUPERFAMILY SSF74650 9 337 4.96E-100 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 PANTHER PTHR10091:SF0 1 340 5.4E-132 T 22-04-2016 SAMA_RS02855 4a94dbc7295b102593ba95ccdbb07c1f 341 Gene3D G3DSA:2.70.98.10 9 340 2.4E-107 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 SUPERFAMILY SSF50621 254 412 5.23E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 3.4E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.0E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.0E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.0E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.0E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.0E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 40.708 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 410 2.1E-158 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PANTHER PTHR11482 6 414 1.4E-176 T 22-04-2016 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.9E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.9E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.9E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.9E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 PANTHER PTHR11482:SF5 6 414 1.4E-176 T 22-04-2016 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 Gene3D G3DSA:2.40.37.10 268 412 9.3E-50 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 286 387 1.8E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 SUPERFAMILY SSF51419 26 282 1.44E-80 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS16920 c8663129bf6c47a4dd57dd101be9a4e2 414 Gene3D G3DSA:3.20.20.10 36 267 3.3E-82 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 Pfam PF03466 LysR substrate binding domain 89 292 8.9E-31 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 SUPERFAMILY SSF46785 3 87 1.49E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 SUPERFAMILY SSF53850 90 293 7.6E-33 T 22-04-2016 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 Gene3D G3DSA:3.40.190.10 175 257 5.7E-21 T 22-04-2016 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 PANTHER PTHR30537 1 293 6.0E-98 T 22-04-2016 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 Gene3D G3DSA:3.40.190.10 90 174 7.9E-7 T 22-04-2016 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 PANTHER PTHR30537:SF26 1 293 6.0E-98 T 22-04-2016 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17485 4dbc4a8c4976fa1ac46d48632f784980 296 Gene3D G3DSA:1.10.10.10 2 86 9.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00765 5cb0f08c323de3ebc87a0b2c751c3867 263 PANTHER PTHR10108:SF868 46 248 9.6E-35 T 22-04-2016 SAMA_RS00765 5cb0f08c323de3ebc87a0b2c751c3867 263 SUPERFAMILY SSF53335 42 263 1.03E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00765 5cb0f08c323de3ebc87a0b2c751c3867 263 Gene3D G3DSA:3.40.50.150 46 227 1.4E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00765 5cb0f08c323de3ebc87a0b2c751c3867 263 PANTHER PTHR10108 46 248 9.6E-35 T 22-04-2016 SAMA_RS00765 5cb0f08c323de3ebc87a0b2c751c3867 263 Pfam PF13649 Methyltransferase domain 53 153 1.5E-12 T 22-04-2016 SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 SUPERFAMILY SSF52172 1 120 9.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 SMART SM00448 2 115 1.9E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 PANTHER PTHR26402 2 119 4.2E-43 T 22-04-2016 SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 PANTHER PTHR26402:SF586 2 119 4.2E-43 T 22-04-2016 SAMA_RS18170 ef00385eb7b36e5274ee738695cfa184 120 Gene3D G3DSA:3.40.50.2300 1 119 3.1E-39 T 22-04-2016 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PANTHER PTHR11236 18 522 1.4E-232 T 22-04-2016 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 SUPERFAMILY SSF56322 22 522 9.68E-152 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 Pfam PF00425 chorismate binding enzyme 253 513 1.1E-89 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 26 522 9.1E-211 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 199 1.5E-17 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PRINTS PR00095 Anthranilate synthase component I signature 455 469 2.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PRINTS PR00095 Anthranilate synthase component I signature 375 388 2.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PRINTS PR00095 Anthranilate synthase component I signature 470 484 2.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PRINTS PR00095 Anthranilate synthase component I signature 361 374 2.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 Gene3D G3DSA:3.60.120.10 19 522 2.4E-155 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PANTHER PTHR11236:SF22 18 522 1.4E-232 T 22-04-2016 SAMA_RS11125 20c98d1bbd2e8c3fcdf830a84cddea5f 527 PIRSF PIRSF001373 7 526 1.2E-236 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 SUPERFAMILY SSF53756 3 372 1.1E-135 T 22-04-2016 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 Gene3D G3DSA:3.40.50.2000 213 372 4.1E-65 T 22-04-2016 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 PANTHER PTHR18964:SF2 2 372 1.3E-204 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 PANTHER PTHR18964 2 372 1.3E-204 T 22-04-2016 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 Gene3D G3DSA:3.40.50.2000 1 212 9.7E-89 T 22-04-2016 SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 372 1.4E-122 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SAMA_RS11845 ae50232ce7d4c11313993ec5359a122e 373 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 372 1.2E-161 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 PANTHER PTHR12169:SF11 1 369 7.2E-189 T 22-04-2016 SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 Gene3D G3DSA:3.40.50.300 2 177 3.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 Pfam PF03969 AFG1-like ATPase 5 364 7.3E-145 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 SUPERFAMILY SSF52540 32 200 2.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 369 54.089 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 SAMA_RS16030 01de46b98953cde0c315f9ab468f67d4 369 PANTHER PTHR12169 1 369 7.2E-189 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 Gene3D G3DSA:3.40.220.10 1 161 1.9E-66 T 22-04-2016 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PANTHER PTHR11963 7 502 3.5E-261 T 22-04-2016 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 SUPERFAMILY SSF53187 180 496 2.17E-125 T 22-04-2016 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 3.0E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 3.0E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 3.0E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 3.0E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 3.0E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 SUPERFAMILY SSF52949 1 184 3.71E-52 T 22-04-2016 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 PANTHER PTHR11963:SF13 7 502 3.5E-261 T 22-04-2016 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 9.3E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.461 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.8E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS04170 525e357ed6757a07598c2c20ad50bc51 502 Gene3D G3DSA:3.40.630.10 171 496 3.9E-138 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 6.7E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 768 813 3.9E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 3.1E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 708 0.28 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 3.8E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 1.8E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.6E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 SUPERFAMILY SSF56719 30 520 4.71E-182 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 865 29.936 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169:SF48 734 838 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169:SF48 449 708 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169:SF48 2 417 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169 734 838 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169 449 708 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 PANTHER PTHR10169 2 417 0.0 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Gene3D G3DSA:1.10.268.10 362 496 1.5E-46 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.1E-153 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 863 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 SMART SM00434 11 498 2.3E-295 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Gene3D G3DSA:2.120.10.90 530 863 7.5E-137 T 22-04-2016 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Gene3D G3DSA:3.90.199.10 34 216 1.0E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 Gene3D G3DSA:3.30.1360.40 236 332 2.6E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SAMA_RS09025 fb3113f6ff0b68ae353d2c072792b39b 901 SUPERFAMILY SSF101904 532 872 2.75E-104 T 22-04-2016 SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 Hamap MF_00648 Non-canonical purine NTP phosphatase. 6 179 29.02 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 10 179 1.0E-38 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 Pfam PF01931 Protein of unknown function DUF84 11 173 1.2E-56 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 SUPERFAMILY SSF52972 6 179 4.8E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 Gene3D G3DSA:3.90.950.10 6 179 1.4E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 PANTHER PTHR34699:SF3 1 180 3.2E-70 T 22-04-2016 SAMA_RS14505 502fee41fb35b0c741905d55fc79d559 180 PANTHER PTHR34699 1 180 3.2E-70 T 22-04-2016 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PANTHER PTHR10795 72 306 4.3E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PANTHER PTHR10795 454 545 4.3E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Gene3D G3DSA:3.50.30.30 325 442 1.3E-20 T 22-04-2016 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Gene3D G3DSA:3.40.50.200 443 517 4.2E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Gene3D G3DSA:3.40.50.200 80 324 4.2E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 SUPERFAMILY SSF52743 105 517 1.96E-82 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Pfam PF00082 Subtilase family 123 291 6.1E-25 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Pfam PF00082 Subtilase family 447 506 2.0E-11 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Pfam PF02225 PA domain 369 433 1.9E-8 T 22-04-2016 IPR003137 PA domain SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 127 138 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 456 466 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 173 2.7E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PRINTS PR00723 Subtilisin serine protease family (S8) signature 122 141 2.7E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PRINTS PR00723 Subtilisin serine protease family (S8) signature 455 471 2.7E-17 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 164 174 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PANTHER PTHR10795:SF419 72 306 4.3E-50 T 22-04-2016 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 PANTHER PTHR10795:SF419 454 545 4.3E-50 T 22-04-2016 SAMA_RS09820 980e703e0e1cbb2c7c63767f9aace190 607 Gene3D G3DSA:3.30.70.80 18 79 3.5E-5 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 SUPERFAMILY SSF53850 32 262 2.1E-35 T 22-04-2016 SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 PANTHER PTHR35936 1 266 1.2E-25 T 22-04-2016 SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 SMART SM00062 31 259 1.7E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 257 4.3E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 Gene3D G3DSA:3.40.190.10 216 258 3.4E-15 T 22-04-2016 SAMA_RS02810 06d3820b4222575a73cc4cd847dcd4d7 268 Gene3D G3DSA:3.40.190.10 32 115 3.4E-15 T 22-04-2016 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 3.7E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PIRSF PIRSF001553 1 289 8.4E-135 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 SMART SM00881 4 100 1.5E-36 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 SUPERFAMILY SSF51735 1 122 1.36E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 Pfam PF02629 CoA binding domain 6 99 3.5E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 Gene3D G3DSA:3.40.50.261 120 286 2.0E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 Pfam PF00549 CoA-ligase 151 271 2.1E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 SUPERFAMILY SSF52210 123 285 2.62E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 Gene3D G3DSA:3.40.50.720 2 119 9.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.6E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.6E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.6E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.6E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SAMA_RS07445 92543f8c989bbaf1672562ce0c7ec37c 290 PANTHER PTHR11117 1 286 1.8E-200 T 22-04-2016 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 Gene3D G3DSA:3.20.20.80 163 569 1.9E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 96 1.2E-13 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 PANTHER PTHR10357:SF74 23 573 3.7E-231 T 22-04-2016 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 SUPERFAMILY SSF81296 20 142 5.8E-29 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 PANTHER PTHR10357 23 573 3.7E-231 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 Pfam PF00128 Alpha amylase, catalytic domain 195 278 2.0E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 Gene3D G3DSA:2.60.40.10 19 162 2.2E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 20 679 2.1E-247 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 SUPERFAMILY SSF51445 141 469 1.17E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 SUPERFAMILY SSF51445 496 568 1.17E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 SUPERFAMILY SSF51011 588 679 7.19E-7 T 22-04-2016 SAMA_RS12805 b79658f2b56f4449dea97f8c2eaca5a2 689 SMART SM00642 165 562 7.5E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS07620 43bacefb18e36fb32ef78168af93cdb2 390 Gene3D G3DSA:3.20.20.140 77 378 2.7E-17 T 22-04-2016 SAMA_RS07620 43bacefb18e36fb32ef78168af93cdb2 390 Pfam PF04909 Amidohydrolase 217 363 2.8E-11 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS07620 43bacefb18e36fb32ef78168af93cdb2 390 SUPERFAMILY SSF51556 215 376 2.61E-12 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 SUPERFAMILY SSF48452 50 246 1.29E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 PANTHER PTHR23083:SF414 44 377 1.9E-51 T 22-04-2016 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Gene3D G3DSA:1.25.40.10 96 131 1.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 PANTHER PTHR23083 44 377 1.9E-51 T 22-04-2016 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Pfam PF13181 Tetratricopeptide repeat 84 109 9.6E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Gene3D G3DSA:1.25.40.10 52 95 1.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Gene3D G3DSA:1.25.40.10 258 391 1.3E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 SUPERFAMILY SSF48452 222 400 5.69E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Gene3D G3DSA:1.25.40.10 132 246 7.4E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06595 7ab7614bf128d1d95458babfe26c5cfd 416 Pfam PF13432 Tetratricopeptide repeat 331 381 0.012 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.0E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 PANTHER PTHR30239 1 164 5.0E-90 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-38 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 Gene3D G3DSA:3.30.70.260 1 78 2.6E-34 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 6.0E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 Gene3D G3DSA:3.30.70.1150 83 163 1.9E-28 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 SUPERFAMILY SSF55021 1 75 8.3E-22 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 SUPERFAMILY SSF55021 79 162 1.72E-26 T 22-04-2016 SAMA_RS10535 57d7cbda66f6084aef56ca02d00cc7d5 164 Pfam PF13710 ACT domain 11 73 1.4E-16 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 Pfam PF07971 Glycosyl hydrolase family 92 275 759 1.2E-173 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 Gene3D G3DSA:1.20.1610.10 474 624 2.0E-61 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143:SF22 261 404 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143:SF22 422 764 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143:SF22 1 237 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 SUPERFAMILY SSF48208 300 756 9.86E-34 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 Gene3D G3DSA:3.30.2080.10 625 768 6.4E-65 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 Gene3D G3DSA:2.70.98.10 22 357 8.0E-102 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143 261 404 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143 422 764 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 PANTHER PTHR12143 1 237 3.4E-209 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 Gene3D G3DSA:1.20.1050.60 380 473 1.2E-34 T 22-04-2016 SAMA_RS03005 6d2dda8c4518d5d4e31e267ac892ba38 782 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 10 764 3.2E-203 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 SUPERFAMILY SSF51735 1 143 3.77E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 SUPERFAMILY SSF51735 174 374 3.77E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 PANTHER PTHR10366:SF41 2 304 5.2E-165 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 PANTHER PTHR10366:SF41 328 377 5.2E-165 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 Gene3D G3DSA:3.90.25.10 221 377 2.9E-51 T 22-04-2016 SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 281 3.4E-65 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 Gene3D G3DSA:3.40.50.720 1 138 4.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 Gene3D G3DSA:3.40.50.720 170 220 4.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 PANTHER PTHR10366 2 304 5.2E-165 T 22-04-2016 SAMA_RS11750 23b3e02262b8c7e4e3487a7a5a76f3dd 377 PANTHER PTHR10366 328 377 5.2E-165 T 22-04-2016 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 PANTHER PTHR10277:SF9 1 509 2.5E-253 T 22-04-2016 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 SUPERFAMILY SSF110921 393 499 6.28E-27 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 SUPERFAMILY SSF51569 1 291 8.94E-99 T 22-04-2016 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 1.0E-236 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 SMART SM00917 369 501 4.4E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.458 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 Pfam PF00682 HMGL-like 4 273 4.0E-100 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.3E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 PANTHER PTHR10277 1 509 2.5E-253 T 22-04-2016 SAMA_RS01795 951d79990a9a83a355e010f192ea4407 522 Gene3D G3DSA:3.20.20.70 1 346 2.4E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 31 239 9.4E-82 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 18 239 4.2E-86 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 Gene3D G3DSA:3.40.50.620 9 213 1.5E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 PIRSF PIRSF000857 2 242 1.5E-53 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 PANTHER PTHR23293:SF5 14 239 8.5E-89 T 22-04-2016 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 6 240 39.149 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 PANTHER PTHR23293 14 239 8.5E-89 T 22-04-2016 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 SUPERFAMILY SSF52402 18 205 1.3E-52 T 22-04-2016 SAMA_RS14820 cdaf919e931195c43e5c5e8ad991123b 242 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 217 5.3E-50 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 TIGRFAM TIGR03814 Gln_ase: glutaminase A 7 304 1.6E-125 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 Hamap MF_00313 Glutaminase [glsA]. 3 304 46.174 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 Gene3D G3DSA:3.40.710.10 4 304 2.9E-118 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 SUPERFAMILY SSF56601 4 304 1.04E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 PANTHER PTHR12544 5 304 1.9E-148 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SAMA_RS12980 4226706f6d0d8f032975077856607bb6 304 Pfam PF04960 Glutaminase 21 304 4.5E-108 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 Gene3D G3DSA:3.40.50.2020 2 159 1.1E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 SMART SM01400 4 121 1.2E-78 T 22-04-2016 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 1.2E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 PANTHER PTHR10210 2 315 4.4E-190 T 22-04-2016 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 3.9E-32 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.1E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.512 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 PANTHER PTHR10210:SF41 2 315 4.4E-190 T 22-04-2016 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 SUPERFAMILY SSF53271 69 306 2.91E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SAMA_RS13400 e07d64046f52ce00624cbc618c45d233 315 Gene3D G3DSA:3.40.50.2020 160 287 9.7E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 Gene3D G3DSA:3.20.20.140 5 328 2.6E-98 T 22-04-2016 SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 Hamap MF_00540 Adenosine deaminase [add]. 1 332 54.651 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 Pfam PF00962 Adenosine/AMP deaminase 6 327 5.6E-88 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 PANTHER PTHR11409 5 330 8.5E-109 T 22-04-2016 SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 329 1.2E-104 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 SAMA_RS00430 8b5659f3595589fc56c77f64fe47bc40 332 SUPERFAMILY SSF51556 5 323 7.88E-78 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 214.49 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Gene3D G3DSA:1.10.300.10 103 196 6.6E-37 T 22-04-2016 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Gene3D G3DSA:3.40.440.10 197 266 1.6E-71 T 22-04-2016 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Gene3D G3DSA:3.40.440.10 3 94 1.6E-71 T 22-04-2016 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 PANTHER PTHR11846 1 429 1.2E-252 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Pfam PF00709 Adenylosuccinate synthetase 5 423 9.4E-177 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 Gene3D G3DSA:3.90.170.10 267 426 2.7E-65 T 22-04-2016 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 SUPERFAMILY SSF52540 3 430 2.44E-179 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 1.9E-191 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS16015 9a9b6b662ce5dfe6e2b2fd154f4b6e6c 431 SMART SM00788 4 425 2.6E-298 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SAMA_RS17405 357f96d84172282415faedb99e436aa3 179 Gene3D G3DSA:3.30.1060.10 20 169 2.8E-29 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS17405 357f96d84172282415faedb99e436aa3 179 PANTHER PTHR10173:SF34 24 160 3.6E-29 T 22-04-2016 SAMA_RS17405 357f96d84172282415faedb99e436aa3 179 PANTHER PTHR10173 24 160 3.6E-29 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SAMA_RS17405 357f96d84172282415faedb99e436aa3 179 SUPERFAMILY SSF55068 11 170 2.62E-39 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS17405 357f96d84172282415faedb99e436aa3 179 Pfam PF01625 Peptide methionine sulfoxide reductase 24 159 3.1E-23 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 PANTHER PTHR21089 1 270 1.0E-134 T 22-04-2016 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 190 1.2E-10 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 268 32.033 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 SUPERFAMILY SSF51735 103 267 5.59E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 269 6.0E-83 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.8E-27 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 SUPERFAMILY SSF53223 2 102 3.57E-33 T 22-04-2016 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 Gene3D G3DSA:3.40.50.720 109 243 3.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 Gene3D G3DSA:3.40.192.10 2 108 4.7E-39 T 22-04-2016 SAMA_RS00255 74ee50fedbe065601c483fb359a00be6 273 PANTHER PTHR21089:SF2 1 270 1.0E-134 T 22-04-2016 SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 Gene3D G3DSA:3.40.140.10 101 224 9.9E-46 T 22-04-2016 SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 224 1.3E-68 T 22-04-2016 IPR001405 RadC protein SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 SUPERFAMILY SSF102712 122 191 2.09E-5 T 22-04-2016 SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 Pfam PF04002 RadC-like JAB domain 104 222 8.7E-41 T 22-04-2016 IPR025657 RadC-like JAB domain SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 PANTHER PTHR30471 1 224 5.9E-134 T 22-04-2016 SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 SUPERFAMILY SSF47781 17 87 1.47E-8 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS01755 7d9cf830fa4ebe1a73f69746628c5a34 225 PANTHER PTHR30471:SF5 1 224 5.9E-134 T 22-04-2016 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.4E-86 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 PANTHER PTHR11587:SF3 1 212 7.7E-105 T 22-04-2016 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 PANTHER PTHR11587 1 212 7.7E-105 T 22-04-2016 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 Gene3D G3DSA:3.40.50.620 2 212 3.4E-86 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 PIRSF PIRSF006293 1 225 8.8E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 SUPERFAMILY SSF52402 1 212 2.65E-68 T 22-04-2016 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.125 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09540 88f82233c020c136e65e8c86216bca37 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.0E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 69 286 2.5E-41 T 22-04-2016 IPR003741 LUD domain SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 Gene3D G3DSA:3.40.50.10420 63 126 4.8E-33 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 Gene3D G3DSA:3.40.50.10420 188 282 4.8E-33 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 PANTHER PTHR32479 24 456 6.3E-203 T 22-04-2016 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 353 364 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 SUPERFAMILY SSF46548 298 383 1.19E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 Pfam PF13183 4Fe-4S dicluster domain 303 367 4.5E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 Gene3D G3DSA:1.10.1060.10 302 385 6.4E-14 T 22-04-2016 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 SUPERFAMILY SSF100950 133 288 3.18E-27 T 22-04-2016 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 SUPERFAMILY SSF100950 64 87 3.18E-27 T 22-04-2016 SAMA_RS12755 8b07b706614018d541a9b2f12b0f8a73 466 PANTHER PTHR32479:SF10 24 456 6.3E-203 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 Gene3D G3DSA:3.30.450.20 41 182 1.7E-38 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 Pfam PF00672 HAMP domain 204 273 6.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PANTHER PTHR32089:SF55 66 554 9.5E-198 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 Gene3D G3DSA:1.10.287.950 308 522 4.0E-55 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 3.47E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 3.47E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 219 3.47E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 467 496 3.47E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 SUPERFAMILY SSF58104 245 554 3.79E-75 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 SMART SM01049 45 130 5.0E-29 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 PANTHER PTHR32089 66 554 9.5E-198 T 22-04-2016 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 Pfam PF17200 Single Cache domain 2 78 188 2.2E-28 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 SMART SM00304 223 277 8.4E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 552 2.2E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS15035 a90e3b20cd3d7a6b0006fd5fc6faad27 554 SMART SM00283 292 553 3.2E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS00165 19309738d246c77d94253cfc5e5f8051 485 PANTHER PTHR32024 1 484 4.4E-268 T 22-04-2016 SAMA_RS00165 19309738d246c77d94253cfc5e5f8051 485 PIRSF PIRSF006247 1 485 7.9E-178 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SAMA_RS00165 19309738d246c77d94253cfc5e5f8051 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 468 2.1E-120 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SAMA_RS00165 19309738d246c77d94253cfc5e5f8051 485 PANTHER PTHR32024:SF2 1 484 4.4E-268 T 22-04-2016 SAMA_RS00165 19309738d246c77d94253cfc5e5f8051 485 Pfam PF02386 Cation transport protein 37 479 8.9E-90 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Pfam PF00072 Response regulator receiver domain 4 115 2.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SUPERFAMILY SSF141868 316 564 3.01E-80 T 22-04-2016 IPR001633 EAL domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SMART SM00052 311 560 7.6E-95 T 22-04-2016 IPR001633 EAL domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 1.1E-40 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Gene3D G3DSA:3.40.50.2300 1 134 1.8E-25 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 297 1.1E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SUPERFAMILY SSF52172 1 140 1.85E-27 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Gene3D G3DSA:3.30.70.270 141 309 3.6E-53 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Pfam PF00563 EAL domain 319 555 7.6E-66 T 22-04-2016 IPR001633 EAL domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 Gene3D G3DSA:3.20.20.450 314 563 4.8E-84 T 22-04-2016 IPR001633 EAL domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 PANTHER PTHR10799:SF774 455 474 2.6E-71 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 PANTHER PTHR10799:SF774 50 391 2.6E-71 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 PANTHER PTHR10799 455 474 2.6E-71 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 PANTHER PTHR10799 50 391 2.6E-71 T 22-04-2016 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SMART SM00448 1 116 6.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SMART SM00267 129 301 5.1E-55 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16475 76f2e79c625c6e2f78e87d1fc7b79ffc 576 SUPERFAMILY SSF55073 145 302 2.12E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Pfam PF11741 AMIN domain 29 129 2.0E-19 T 22-04-2016 IPR021731 AMIN domain SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 SMART SM00257 390 433 3.2E-14 T 22-04-2016 IPR018392 LysM domain SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 PANTHER PTHR30404 1 403 1.7E-167 T 22-04-2016 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Gene3D G3DSA:3.10.350.10 390 434 9.6E-17 T 22-04-2016 IPR018392 LysM domain SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 SMART SM00646 211 370 2.3E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 SUPERFAMILY SSF54106 390 433 3.01E-10 T 22-04-2016 IPR018392 LysM domain SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Gene3D G3DSA:3.40.630.40 149 246 2.8E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Gene3D G3DSA:3.40.630.40 298 374 2.8E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Pfam PF01476 LysM domain 391 433 7.1E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 151 369 5.0E-46 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 PANTHER PTHR30404:SF1 1 403 1.7E-167 T 22-04-2016 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 SUPERFAMILY SSF53187 297 373 1.13E-51 T 22-04-2016 SAMA_RS15790 d0580be77108814f5a5527cc8c602fca 435 SUPERFAMILY SSF53187 149 245 1.13E-51 T 22-04-2016 SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 Pfam PF01136 Peptidase family U32 100 328 2.3E-65 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 PANTHER PTHR30217:SF10 23 639 4.3E-215 T 22-04-2016 SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 Pfam PF12392 Collagenase 414 528 2.1E-20 T 22-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 PANTHER PTHR30217 23 639 4.3E-215 T 22-04-2016 SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 Gene3D G3DSA:3.20.20.70 44 178 8.6E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS03575 7ae8acce2b19dacad697c0f59b56821a 639 ProSitePatterns PS01276 Peptidase family U32 signature. 183 201 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS16345 7e00814322c10e323a9dc5fd495c57c2 166 Pfam PF03350 Uncharacterized protein family, UPF0114 9 131 6.5E-28 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SAMA_RS16345 7e00814322c10e323a9dc5fd495c57c2 166 PANTHER PTHR31721 5 160 1.2E-18 T 22-04-2016 SAMA_RS16345 7e00814322c10e323a9dc5fd495c57c2 166 PIRSF PIRSF026509 1 166 5.6E-31 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SAMA_RS07510 9a821976eb79f54f827694b5f4ebd5c9 286 PANTHER PTHR10120:SF19 1 285 1.6E-100 T 22-04-2016 SAMA_RS07510 9a821976eb79f54f827694b5f4ebd5c9 286 Pfam PF01435 Peptidase family M48 73 285 7.2E-41 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SAMA_RS07510 9a821976eb79f54f827694b5f4ebd5c9 286 Gene3D G3DSA:3.30.2010.10 70 156 8.5E-32 T 22-04-2016 SAMA_RS07510 9a821976eb79f54f827694b5f4ebd5c9 286 Hamap MF_00188 Protease HtpX [htpX]. 1 286 25.21 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SAMA_RS07510 9a821976eb79f54f827694b5f4ebd5c9 286 PANTHER PTHR10120 1 285 1.6E-100 T 22-04-2016 SAMA_RS16175 beec3742b940f4bfd0d1dcb5fb5bff9c 394 PANTHER PTHR30528 6 394 1.5E-105 T 22-04-2016 SAMA_RS16175 beec3742b940f4bfd0d1dcb5fb5bff9c 394 Pfam PF06224 Winged helix DNA-binding domain 35 368 1.6E-86 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 Gene3D G3DSA:3.30.450.40 237 416 5.1E-11 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 Pfam PF01590 GAF domain 266 397 2.1E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 PANTHER PTHR10799:SF706 454 577 1.3E-12 T 22-04-2016 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 PANTHER PTHR10799:SF706 98 224 1.3E-12 T 22-04-2016 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 SUPERFAMILY SSF55781 266 395 2.28E-11 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 SMART SM00267 416 582 5.0E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 577 6.6E-35 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 580 3.0E-35 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 SUPERFAMILY SSF55073 432 581 2.9E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 Gene3D G3DSA:3.30.70.270 429 581 6.6E-40 T 22-04-2016 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 PANTHER PTHR10799 454 577 1.3E-12 T 22-04-2016 SAMA_RS17120 8ed65979d0639ab53b97fa11d6f23473 595 PANTHER PTHR10799 98 224 1.3E-12 T 22-04-2016 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 Gene3D G3DSA:3.30.1130.10 90 213 1.1E-49 T 22-04-2016 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 SUPERFAMILY SSF55620 9 213 1.04E-73 T 22-04-2016 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 95 111 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 33 216 33.172 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 37 213 1.9E-77 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 PANTHER PTHR11109 3 212 2.2E-100 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 143 153 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 Pfam PF01227 GTP cyclohydrolase I 37 213 4.9E-62 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SAMA_RS01730 9ae818139a236bbfd076ea84d973a864 216 Gene3D G3DSA:1.10.286.10 2 83 3.9E-30 T 22-04-2016 SAMA_RS08205 df9b82b13cf7271eb038f4cb5e0c3814 249 Gene3D G3DSA:3.40.190.10 99 193 3.0E-6 T 22-04-2016 SAMA_RS08205 df9b82b13cf7271eb038f4cb5e0c3814 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 99 240 1.6E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS08205 df9b82b13cf7271eb038f4cb5e0c3814 249 PANTHER PTHR35936:SF3 3 237 1.2E-50 T 22-04-2016 SAMA_RS08205 df9b82b13cf7271eb038f4cb5e0c3814 249 PANTHER PTHR35936 3 237 1.2E-50 T 22-04-2016 SAMA_RS08205 df9b82b13cf7271eb038f4cb5e0c3814 249 SUPERFAMILY SSF53850 28 242 6.18E-30 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.9E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.9E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.9E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.9E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.9E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PANTHER PTHR19375 9 337 2.0E-189 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 Gene3D G3DSA:3.30.420.40 165 191 3.9E-34 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 Gene3D G3DSA:3.30.420.40 268 322 3.9E-34 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 SUPERFAMILY SSF53067 154 341 1.33E-49 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 Gene3D G3DSA:3.90.640.10 192 264 6.5E-30 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 PANTHER PTHR19375:SF117 9 337 2.0E-189 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 Pfam PF06723 MreB/Mbl protein 11 339 3.9E-148 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 Gene3D G3DSA:3.30.420.40 10 164 6.3E-46 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 SUPERFAMILY SSF53067 9 153 8.91E-38 T 22-04-2016 SAMA_RS02505 46341ddf33aaaab6239b0c8c9cd22be2 349 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 2.1E-165 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Pfam PF00384 Molybdopterin oxidoreductase 96 568 8.8E-85 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:2.40.40.20 660 827 1.0E-44 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:3.40.50.740 96 178 2.8E-77 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:3.40.50.740 620 659 2.8E-77 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:3.40.50.740 398 575 2.8E-77 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 7.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615:SF123 642 827 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615:SF123 1 299 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615:SF123 345 596 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 SMART SM00926 39 93 7.6E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 SUPERFAMILY SSF53706 36 698 3.14E-201 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 2.5E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Pfam PF01568 Molydopterin dinucleotide binding domain 713 821 4.4E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 22 4.8E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:3.40.228.10 325 397 4.0E-55 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:3.40.228.10 179 291 4.0E-55 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 827 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Gene3D G3DSA:2.20.25.90 37 95 1.7E-20 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615 642 827 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615 1 299 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 PANTHER PTHR11615 345 596 0.0 T 22-04-2016 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SAMA_RS15565 2eae549c5687b541936a411171983c21 827 SUPERFAMILY SSF50692 687 827 1.12E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS15565 2eae549c5687b541936a411171983c21 827 Hamap MF_01630 Nitrate reductase [napA]. 1 827 28.651 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SAMA_RS17145 41119d31eaf1b6b15d96911c09a9ba84 313 Pfam PF01553 Acyltransferase 76 216 2.2E-12 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17145 41119d31eaf1b6b15d96911c09a9ba84 313 SMART SM00563 89 231 2.1E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17145 41119d31eaf1b6b15d96911c09a9ba84 313 PANTHER PTHR10983:SF15 1 294 1.3E-134 T 22-04-2016 SAMA_RS17145 41119d31eaf1b6b15d96911c09a9ba84 313 PANTHER PTHR10983 1 294 1.3E-134 T 22-04-2016 SAMA_RS17145 41119d31eaf1b6b15d96911c09a9ba84 313 SUPERFAMILY SSF69593 53 294 6.02E-31 T 22-04-2016 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 Gene3D G3DSA:2.40.50.140 409 470 4.6E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 Pfam PF04055 Radical SAM superfamily 175 352 3.6E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 39 467 1.4E-104 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 37 469 60.512 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 SMART SM00729 169 394 2.5E-49 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 PANTHER PTHR11918:SF57 21 470 1.6E-240 T 22-04-2016 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 Pfam PF00919 Uncharacterized protein family UPF0004 38 121 9.6E-21 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 Gene3D G3DSA:3.80.30.20 167 405 5.4E-70 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 SUPERFAMILY SSF102114 144 400 1.83E-49 T 22-04-2016 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 PANTHER PTHR11918 21 470 1.6E-240 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 173 193 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SAMA_RS02600 1afa4b8af9b2a77f4bb9eadeec0ebe85 474 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 38 466 5.8E-179 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 PANTHER PTHR30213 6 281 1.3E-99 T 22-04-2016 SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 20 277 1.6E-83 T 22-04-2016 IPR017039 Virulence factor BrkB SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 Pfam PF03631 Virulence factor BrkB 30 276 1.3E-61 T 22-04-2016 IPR017039 Virulence factor BrkB SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 PANTHER PTHR30213:SF0 6 281 1.3E-99 T 22-04-2016 SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 PIRSF PIRSF035875 11 295 1.7E-60 T 22-04-2016 IPR017039 Virulence factor BrkB SAMA_RS17715 c28f73fcd13a34c69dadd7a281ec389e 323 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 10 284 23.638 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 PANTHER PTHR19271 2 398 1.0E-273 T 22-04-2016 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 PIRSF PIRSF038885 1 404 2.0E-157 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 279 380 1.5E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 Pfam PF00033 Cytochrome b/b6/petB 26 212 7.4E-66 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 PANTHER PTHR19271:SF9 2 398 1.0E-273 T 22-04-2016 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 Gene3D G3DSA:1.20.810.10 7 402 6.1E-159 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 SUPERFAMILY SSF81342 8 266 7.06E-96 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS15750 a31cdce4ebbca1e64e1520c94e57347b 404 SUPERFAMILY SSF81648 201 369 3.92E-49 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 SUPERFAMILY SSF161098 90 277 4.84E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 6.7E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 PANTHER PTHR30465 7 296 1.4E-163 T 22-04-2016 SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 PANTHER PTHR30465:SF49 7 296 1.4E-163 T 22-04-2016 SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 Gene3D G3DSA:1.10.3720.10 86 292 1.0E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06465 bd14ed38020f6568febdd1d598893607 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 293 7.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 SMART SM00487 20 222 2.5E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 Pfam PF03880 DbpA RNA binding domain 385 454 6.9E-21 T 22-04-2016 IPR005580 DbpA, RNA-binding domain SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 Gene3D G3DSA:3.40.50.300 203 369 2.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 Gene3D G3DSA:3.40.50.300 2 202 4.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 SMART SM00490 254 335 6.2E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 Pfam PF00271 Helicase conserved C-terminal domain 229 335 1.2E-25 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 SUPERFAMILY SSF52540 70 354 2.48E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 Pfam PF00270 DEAD/DEAH box helicase 25 191 2.2E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 PANTHER PTHR24031 2 447 5.8E-293 T 22-04-2016 SAMA_RS03950 4eb4aa814f3c8dcad249aaa19d71337d 458 PANTHER PTHR24031:SF180 2 447 5.8E-293 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 Gene3D G3DSA:3.10.290.10 22 70 1.0E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 PANTHER PTHR11079 97 319 1.1E-149 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 PANTHER PTHR11079 1 81 1.1E-149 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 Pfam PF00849 RNA pseudouridylate synthase 105 252 5.4E-34 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 SMART SM00363 22 81 1.3E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 316 6.1E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 143 157 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 SUPERFAMILY SSF55174 21 72 2.88E-9 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 PANTHER PTHR11079:SF84 97 319 1.1E-149 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 PANTHER PTHR11079:SF84 1 81 1.1E-149 T 22-04-2016 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 Pfam PF01479 S4 domain 22 68 9.5E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS10380 7c1d66b2980b4c187d3bc24116315659 320 SUPERFAMILY SSF55120 97 317 4.48E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 253 5.1E-67 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PIRSF PIRSF000398 2 274 6.5E-67 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PANTHER PTHR30481:SF3 3 280 1.4E-117 T 22-04-2016 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PANTHER PTHR30481 3 280 1.4E-117 T 22-04-2016 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 Gene3D G3DSA:3.40.50.150 2 60 6.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 Gene3D G3DSA:3.40.50.150 161 269 6.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 SUPERFAMILY SSF53335 6 269 4.76E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 269 2.1E-94 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 Gene3D G3DSA:1.10.1020.10 61 157 8.2E-36 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 2.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 2.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 176 188 2.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS17515 1bdb8a9fd03645f8cbb1a37c537aaf69 280 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 2.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SAMA_RS08545 2af4434088afb54658f6ef87ff9094d1 429 Gene3D G3DSA:3.10.450.50 407 429 4.9E-8 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS08545 2af4434088afb54658f6ef87ff9094d1 429 SUPERFAMILY SSF103642 410 428 3.92E-6 T 22-04-2016 SAMA_RS08545 2af4434088afb54658f6ef87ff9094d1 429 Pfam PF02810 SEC-C motif 411 429 4.0E-6 T 22-04-2016 IPR004027 SEC-C motif SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 SUPERFAMILY SSF55729 1 343 2.05E-129 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 341 4.4E-135 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 Gene3D G3DSA:2.40.40.20 290 343 3.4E-7 T 22-04-2016 SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 PANTHER PTHR30420 1 348 3.7E-150 T 22-04-2016 SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 PANTHER PTHR30420:SF1 1 348 3.7E-150 T 22-04-2016 SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 Gene3D G3DSA:3.40.630.30 115 133 3.9E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 Gene3D G3DSA:3.40.630.30 3 79 3.9E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 342 5.1E-129 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS08500 b6e4f04991264f79d41d6be56ea56803 348 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 342 2.5E-132 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 PANTHER PTHR30055 1 185 2.0E-55 T 22-04-2016 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 PANTHER PTHR30055:SF82 1 185 2.0E-55 T 22-04-2016 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 SUPERFAMILY SSF46689 3 68 2.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 7.8E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS17025 38ff05430113fa7e0e9be1208f4861cb 188 Gene3D G3DSA:1.10.357.10 3 185 8.1E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.7E-36 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 PANTHER PTHR21011:SF1 1 134 1.2E-46 T 22-04-2016 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 Gene3D G3DSA:3.30.70.60 1 103 1.4E-41 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 SUPERFAMILY SSF54995 1 103 3.4E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 Pfam PF01250 Ribosomal protein S6 3 91 2.1E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 PANTHER PTHR21011 1 134 1.2E-46 T 22-04-2016 SAMA_RS15990 ea9d81bef42825d28ce7c6c7e371614a 135 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.662 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 SUPERFAMILY SSF56796 449 862 2.62E-120 T 22-04-2016 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Pfam PF00171 Aldehyde dehydrogenase family 5 267 7.6E-23 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 846 5.9E-116 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 PANTHER PTHR11496 360 863 0.0 T 22-04-2016 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 SUPERFAMILY SSF53720 6 453 9.16E-80 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Gene3D G3DSA:1.20.1090.10 642 860 9.3E-68 T 22-04-2016 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Gene3D G3DSA:3.40.50.1970 450 641 1.3E-61 T 22-04-2016 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 PANTHER PTHR11496:SF79 360 863 0.0 T 22-04-2016 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Gene3D G3DSA:3.40.605.10 4 225 2.7E-22 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Gene3D G3DSA:3.40.309.10 226 273 3.1E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 Gene3D G3DSA:3.40.309.10 309 404 3.1E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS08835 025dc76c15a394dae42b73ed782d6eaf 867 PIRSF PIRSF000111 1 862 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 Pfam PF04055 Radical SAM superfamily 386 591 6.9E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 386 406 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 Gene3D G3DSA:3.80.30.20 380 646 5.7E-49 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 Pfam PF08497 Radical SAM N-terminal 23 385 7.1E-145 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 650 5.1E-264 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 PANTHER PTHR32331:SF3 280 734 0.0 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 PANTHER PTHR32331:SF3 2 262 0.0 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 SMART SM00729 382 633 1.2E-8 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 727 48.226 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 SUPERFAMILY SSF102114 360 446 4.71E-12 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 SUPERFAMILY SSF102114 476 610 4.71E-12 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 PANTHER PTHR32331 280 734 0.0 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 PANTHER PTHR32331 2 262 0.0 T 22-04-2016 SAMA_RS17435 ba089df9d9b61d6f87146fe813df7f96 806 Pfam PF11842 Domain of unknown function (DUF3362) 600 745 1.2E-46 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 1.4E-149 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 PANTHER PTHR19136:SF52 13 273 3.2E-132 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 166 3.6E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Gene3D G3DSA:2.160.10.10 89 255 1.4E-60 T 22-04-2016 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 PANTHER PTHR19136 13 273 3.2E-132 T 22-04-2016 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Gene3D G3DSA:1.10.166.10 1 69 4.0E-30 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 8.5E-13 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.287 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 SUPERFAMILY SSF51161 3 256 6.1E-76 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS05955 d1d2814f241018e7c4c500e477c02a76 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 8.4E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 SUPERFAMILY SSF46689 400 505 5.82E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 PANTHER PTHR32071:SF35 187 505 4.7E-167 T 22-04-2016 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Gene3D G3DSA:3.40.50.300 185 359 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Pfam PF00158 Sigma-54 interaction domain 187 353 3.2E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Gene3D G3DSA:1.10.8.60 360 409 5.8E-22 T 22-04-2016 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 SMART SM00065 20 168 1.6E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 SMART SM00382 207 350 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Pfam PF01590 GAF domain 24 139 1.4E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 PANTHER PTHR32071 187 505 4.7E-167 T 22-04-2016 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 SUPERFAMILY SSF55781 5 166 3.05E-15 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 SUPERFAMILY SSF52540 187 419 4.33E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Gene3D G3DSA:1.10.10.60 410 505 2.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 Gene3D G3DSA:3.30.450.40 5 169 1.7E-15 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS03825 472807c8ed0ff9fb40890984bb192c82 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 SUPERFAMILY SSF158472 187 233 6.8E-5 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 2.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 167 187 2.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 379 2.4E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 Pfam PF08447 PAS fold 32 114 1.7E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 SMART SM00086 80 121 2.3E-4 T 22-04-2016 IPR001610 PAC motif SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 SUPERFAMILY SSF58104 233 515 1.23E-59 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 SMART SM00283 254 515 1.6E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 509 4.6E-39 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 Gene3D G3DSA:3.30.450.20 21 114 6.3E-22 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 PANTHER PTHR32089:SF64 51 518 4.1E-93 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 PANTHER PTHR32089 51 518 4.1E-93 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 126 1.6E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 Gene3D G3DSA:1.10.287.950 269 484 1.5E-48 T 22-04-2016 SAMA_RS02840 4da6f878d766db52a8abc80a4d704435 523 SUPERFAMILY SSF55785 19 115 3.14E-25 T 22-04-2016 IPR000014 PAS domain SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 Gene3D G3DSA:3.40.50.300 1 247 1.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 PANTHER PTHR13696 1 257 6.0E-91 T 22-04-2016 SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 PIRSF PIRSF003092 1 269 7.3E-92 T 22-04-2016 IPR025501 ATP binding protein MinD SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 PANTHER PTHR13696:SF1 1 257 6.0E-91 T 22-04-2016 SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.2E-27 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.1E-109 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 SAMA_RS10100 eb22b9c9ef440cc526597c96f8fc0a5b 269 SUPERFAMILY SSF52540 1 267 3.57E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 Gene3D G3DSA:2.30.22.10 136 193 2.7E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 SUPERFAMILY SSF58014 38 136 6.8E-28 T 22-04-2016 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 Pfam PF01025 GrpE 31 192 2.0E-51 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 Hamap MF_01151 Protein GrpE [grpE]. 2 192 21.023 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 Gene3D G3DSA:3.90.20.20 38 135 9.6E-31 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 PRINTS PR00773 GrpE protein signature 171 190 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 PRINTS PR00773 GrpE protein signature 144 159 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 PRINTS PR00773 GrpE protein signature 89 104 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 PRINTS PR00773 GrpE protein signature 61 77 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 SUPERFAMILY SSF51064 137 193 1.83E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SAMA_RS12730 ee39c93a0c1df34aba6e3e2c844acde5 200 PANTHER PTHR21237 39 195 1.3E-64 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SAMA_RS08975 8d350e8fad23550eb6996326bdfbd5c6 97 Pfam PF07023 Protein of unknown function (DUF1315) 6 80 2.6E-24 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 32.798 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 PANTHER PTHR30586:SF1 2 208 3.2E-107 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 PIRSF PIRSF006102 4 208 6.5E-66 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.7E-61 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 PANTHER PTHR30586 2 208 3.2E-107 T 22-04-2016 SAMA_RS15540 c84db71f4ebbd3cfe117f7069e67844a 208 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 6 206 3.8E-85 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 SAMA_RS11265 c3b9bfe0416d931f4ce998c51062cae9 87 Pfam PF08891 YfcL protein 4 84 2.0E-29 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 315 348 1.0E-8 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 60 92 4.5E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 359 390 5.2E-7 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 267 304 6.1E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 426 467 6.6E-5 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 170 209 1.3E-8 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 381 407 6.2E-5 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 148 174 4.9E-6 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 Pfam PF07012 Curlin associated repeat 221 255 1.9E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 PANTHER PTHR34771:SF2 1 494 1.5E-161 T 22-04-2016 SAMA_RS15385 50fcaf26367c6fe443cfed27e66ecd81 500 PANTHER PTHR34771 1 494 1.5E-161 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 SUPERFAMILY SSF47413 2 60 1.13E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.9E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.9E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 Pfam PF13377 Periplasmic binding protein-like domain 173 333 8.2E-36 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 Gene3D G3DSA:3.40.50.2300 178 311 8.5E-52 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 Gene3D G3DSA:1.10.260.40 3 54 1.4E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 5.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 PANTHER PTHR30146:SF35 1 336 4.7E-208 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 PANTHER PTHR30146 1 336 4.7E-208 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 Gene3D G3DSA:3.40.50.2300 55 177 1.5E-24 T 22-04-2016 SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 SUPERFAMILY SSF53822 63 335 5.3E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS04890 e53ccb2e4390d87099faeee6550680f1 337 SMART SM00354 2 72 1.1E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS00380 b9d85061cb10bd2d76944fdffc8295c5 400 Pfam PF00756 Putative esterase 45 178 8.2E-6 T 22-04-2016 IPR000801 Putative esterase SAMA_RS00380 b9d85061cb10bd2d76944fdffc8295c5 400 SUPERFAMILY SSF53474 31 267 5.33E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00380 b9d85061cb10bd2d76944fdffc8295c5 400 Gene3D G3DSA:3.40.50.1820 114 267 1.1E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PANTHER PTHR30012:SF0 22 419 4.2E-167 T 22-04-2016 SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 7.9E-20 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 7.9E-20 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 7.9E-20 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 7.9E-20 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 Pfam PF00482 Type II secretion system (T2SS), protein F 85 207 5.0E-30 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 5.0E-29 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 PANTHER PTHR30012 22 419 4.2E-167 T 22-04-2016 SAMA_RS02005 356aba901af87adb035a8a7297899b0e 419 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 179 207 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SAMA_RS06965 68028fa9de1789143cb07b8e1746ebdf 420 Pfam PF12704 MacB-like periplasmic core domain 31 175 1.8E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SAMA_RS06965 68028fa9de1789143cb07b8e1746ebdf 420 PANTHER PTHR30489 9 420 1.1E-82 T 22-04-2016 SAMA_RS06965 68028fa9de1789143cb07b8e1746ebdf 420 PANTHER PTHR30489:SF8 9 420 1.1E-82 T 22-04-2016 SAMA_RS06965 68028fa9de1789143cb07b8e1746ebdf 420 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 9 418 4.1E-131 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SAMA_RS06965 68028fa9de1789143cb07b8e1746ebdf 420 Pfam PF02687 FtsX-like permease family 280 410 9.8E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS02270 b076ae20144fb147673402d3a5d030b6 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 3 286 28.574 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 SAMA_RS02270 b076ae20144fb147673402d3a5d030b6 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 284 1.9E-98 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 SAMA_RS02270 b076ae20144fb147673402d3a5d030b6 290 PANTHER PTHR11048 1 290 6.5E-88 T 22-04-2016 SAMA_RS02270 b076ae20144fb147673402d3a5d030b6 290 Pfam PF01040 UbiA prenyltransferase family 26 270 3.6E-62 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SAMA_RS02270 b076ae20144fb147673402d3a5d030b6 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 65 87 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site SAMA_RS01835 964b0a6db8c1942023bb6f685615f36f 346 Pfam PF03929 PepSY-associated TM region 5 228 5.7E-8 T 22-04-2016 IPR005625 PepSY-associated TM protein SAMA_RS01835 964b0a6db8c1942023bb6f685615f36f 346 SUPERFAMILY SSF54292 250 317 1.37E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS01835 964b0a6db8c1942023bb6f685615f36f 346 Gene3D G3DSA:3.10.20.30 250 313 8.5E-9 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS01835 964b0a6db8c1942023bb6f685615f36f 346 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 256 312 2.1E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 PANTHER PTHR23029 1 191 2.9E-36 T 22-04-2016 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 PIRSF PIRSF000709 1 190 1.4E-14 T 22-04-2016 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 SUPERFAMILY SSF53254 1 183 3.27E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 SMART SM00855 4 157 1.6E-21 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 PANTHER PTHR23029:SF1 1 191 2.9E-36 T 22-04-2016 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 180 2.6E-39 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS05800 714312809d49288f6d6840bc65fd718a 199 Gene3D G3DSA:3.40.50.1240 1 193 3.9E-49 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Pfam PF14561 Tetratricopeptide repeat 191 279 1.3E-24 T 22-04-2016 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Gene3D G3DSA:1.25.40.10 104 191 8.9E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Gene3D G3DSA:1.25.40.10 192 279 3.7E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 PANTHER PTHR10438 6 106 2.1E-28 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 PANTHER PTHR10438 228 249 2.1E-28 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Pfam PF14559 Tetratricopeptide repeat 119 185 3.5E-10 T 22-04-2016 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 PANTHER PTHR10438:SF288 6 106 2.1E-28 T 22-04-2016 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 PANTHER PTHR10438:SF288 228 249 2.1E-28 T 22-04-2016 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Gene3D G3DSA:3.40.30.10 5 103 2.7E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 Pfam PF00085 Thioredoxin 6 102 2.6E-6 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SAMA_RS06865 a92d0c54252cab3fe80f3b0f5d1a1d10 279 SUPERFAMILY SSF52833 4 105 3.01E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 Pfam PF00816 H-NS histone family 32 123 3.5E-19 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 SUPERFAMILY SSF81273 87 130 4.71E-9 T 22-04-2016 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 PANTHER PTHR38097:SF2 2 130 4.2E-50 T 22-04-2016 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 Gene3D G3DSA:4.10.430.10 88 130 3.1E-19 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 Gene3D G3DSA:1.10.287.1050 1 58 4.9E-7 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 SUPERFAMILY SSF81273 2 58 8.83E-15 T 22-04-2016 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 SMART SM00528 84 130 9.3E-19 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 PANTHER PTHR38097 2 130 4.2E-50 T 22-04-2016 SAMA_RS06115 576b0ada92dc0313560bc6ec4077879e 130 PIRSF PIRSF002096 1 130 5.5E-43 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PRINTS PR00723 Subtilisin serine protease family (S8) signature 669 685 4.2E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PRINTS PR00723 Subtilisin serine protease family (S8) signature 215 234 4.2E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PRINTS PR00723 Subtilisin serine protease family (S8) signature 295 308 4.2E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 Pfam PF00082 Subtilase family 215 708 5.1E-44 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 220 231 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 Gene3D G3DSA:3.50.30.30 527 597 2.9E-5 T 22-04-2016 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 Pfam PF02225 PA domain 517 590 3.1E-8 T 22-04-2016 IPR003137 PA domain SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795:SF419 65 112 5.2E-142 T 22-04-2016 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795:SF419 524 839 5.2E-142 T 22-04-2016 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795:SF419 147 442 5.2E-142 T 22-04-2016 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 SUPERFAMILY SSF52743 292 448 6.15E-65 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 SUPERFAMILY SSF52743 620 740 6.15E-65 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 SUPERFAMILY SSF52743 196 254 6.15E-65 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795 65 112 5.2E-142 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795 524 839 5.2E-142 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PANTHER PTHR10795 147 442 5.2E-142 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 Gene3D G3DSA:3.40.50.200 616 740 4.2E-72 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 Gene3D G3DSA:3.40.50.200 163 444 4.2E-72 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 299 309 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 PIRSF PIRSF037895 2 1634 0.0 T 22-04-2016 SAMA_RS00770 feffa598f046c7ca2907c04593e024a5 1638 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 670 680 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS15935 94e819988dca9be2e1bf10697b2fdf72 246 PANTHER PTHR11941:SF17 2 245 4.2E-90 T 22-04-2016 SAMA_RS15935 94e819988dca9be2e1bf10697b2fdf72 246 SUPERFAMILY SSF52096 3 245 2.99E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS15935 94e819988dca9be2e1bf10697b2fdf72 246 Gene3D G3DSA:3.90.226.10 2 245 2.0E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS15935 94e819988dca9be2e1bf10697b2fdf72 246 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 245 8.9E-46 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS15935 94e819988dca9be2e1bf10697b2fdf72 246 PANTHER PTHR11941 2 245 4.2E-90 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Gene3D G3DSA:3.30.70.360 251 324 4.8E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Pfam PF07687 Peptidase dimerisation domain 302 390 3.1E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 SUPERFAMILY SSF53187 439 522 2.37E-46 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 SUPERFAMILY SSF53187 49 228 2.37E-46 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Gene3D G3DSA:3.30.70.360 325 413 5.8E-14 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 SUPERFAMILY SSF55031 228 423 2.09E-39 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 PANTHER PTHR11014 37 232 1.9E-31 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 PANTHER PTHR11014 302 525 1.9E-31 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Pfam PF01546 Peptidase family M20/M25/M40 126 518 2.7E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 115 518 2.7E-70 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Gene3D G3DSA:3.40.630.10 464 522 3.4E-42 T 22-04-2016 SAMA_RS08160 61dde090a74056ca2cbfa08ba1bd6634 525 Gene3D G3DSA:3.40.630.10 52 234 3.4E-42 T 22-04-2016 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 Gene3D G3DSA:2.170.130.10 23 167 7.9E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 PANTHER PTHR32552 30 697 7.9E-172 T 22-04-2016 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 1.6E-87 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 Pfam PF00593 TonB dependent receptor 455 695 4.9E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 Gene3D G3DSA:2.40.170.20 172 697 3.8E-124 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 156 8.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 PANTHER PTHR32552:SF17 30 697 7.9E-172 T 22-04-2016 SAMA_RS18930 79b557dc96acd49b8f3846f40748c159 697 SUPERFAMILY SSF56935 20 697 2.11E-126 T 22-04-2016 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 PANTHER PTHR11079:SF86 2 223 1.0E-66 T 22-04-2016 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 SUPERFAMILY SSF55120 8 222 7.52E-66 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 221 6.9E-64 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 Pfam PF00849 RNA pseudouridylate synthase 22 168 1.0E-35 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11470 1e801ccf7df232b819b7f0ea1f3e5daa 224 PANTHER PTHR11079 2 223 1.0E-66 T 22-04-2016 SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 Gene3D G3DSA:2.70.70.10 276 415 1.9E-43 T 22-04-2016 SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 Pfam PF08525 Opacity-associated protein A N-terminal motif 8 34 2.4E-6 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 Pfam PF04225 Opacity-associated protein A LysM-like domain 100 166 3.7E-6 T 22-04-2016 IPR007340 Opacity-associated protein A SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 SUPERFAMILY SSF51261 172 415 3.09E-70 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 PANTHER PTHR21666:SF221 96 447 4.8E-167 T 22-04-2016 SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 Pfam PF01551 Peptidase family M23 320 414 3.8E-30 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS04445 6933e49b67dfd3db3d3a45a97be85597 462 PANTHER PTHR21666 96 447 4.8E-167 T 22-04-2016 SAMA_RS07840 f60f6cbf8c94d444e1bee1994d914d12 220 SUPERFAMILY SSF46689 16 81 2.92E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS07840 f60f6cbf8c94d444e1bee1994d914d12 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 1.2E-4 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS07840 f60f6cbf8c94d444e1bee1994d914d12 220 Gene3D G3DSA:1.10.357.10 19 212 3.9E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS07840 f60f6cbf8c94d444e1bee1994d914d12 220 PANTHER PTHR30055 6 72 1.6E-16 T 22-04-2016 SAMA_RS07840 f60f6cbf8c94d444e1bee1994d914d12 220 PANTHER PTHR30055:SF91 6 72 1.6E-16 T 22-04-2016 SAMA_RS05710 977945d81a5ad48ba05e604711184b49 223 PANTHER PTHR36452 1 223 1.3E-34 T 22-04-2016 SAMA_RS05710 977945d81a5ad48ba05e604711184b49 223 PANTHER PTHR36452:SF1 1 223 1.3E-34 T 22-04-2016 SAMA_RS05710 977945d81a5ad48ba05e604711184b49 223 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 2 220 2.7E-77 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SAMA_RS05710 977945d81a5ad48ba05e604711184b49 223 PIRSF PIRSF028451 1 223 1.6E-82 T 22-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 SAMA_RS05710 977945d81a5ad48ba05e604711184b49 223 Pfam PF09365 Conserved hypothetical protein (DUF2461) 6 214 3.5E-60 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 310 7.8E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 SUPERFAMILY SSF51735 2 177 5.38E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 145 7.9E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 Gene3D G3DSA:3.40.50.720 1 161 4.3E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 PANTHER PTHR32338 1 325 3.7E-140 T 22-04-2016 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 SUPERFAMILY SSF55347 155 307 6.11E-41 T 22-04-2016 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 325 5.4E-104 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 Gene3D G3DSA:3.30.360.10 162 307 8.8E-45 T 22-04-2016 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 326 33.635 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01385 3cb67ddc56f4dc59e79166ac5356ee8c 326 SMART SM00859 3 147 2.3E-39 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 5 352 5.1E-157 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 SUPERFAMILY SSF50156 256 349 3.02E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PANTHER PTHR22939 46 350 4.9E-147 T 22-04-2016 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 Pfam PF13180 PDZ domain 259 346 3.1E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 Pfam PF13365 Trypsin-like peptidase domain 83 216 1.3E-31 T 22-04-2016 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 Gene3D G3DSA:2.40.10.10 45 146 2.2E-32 T 22-04-2016 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 Gene3D G3DSA:2.30.42.10 260 352 3.6E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 SMART SM00228 257 339 2.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 113 133 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 153 177 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 92 104 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 2.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 PANTHER PTHR22939:SF93 46 350 4.9E-147 T 22-04-2016 SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 SUPERFAMILY SSF50494 47 254 1.35E-59 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS16040 e3bf78f0a5e8e368d18af094ccc2f3fe 356 Gene3D G3DSA:2.40.10.10 149 259 3.5E-37 T 22-04-2016 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 Gene3D G3DSA:1.10.10.10 2 74 4.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 SUPERFAMILY SSF46785 2 110 8.84E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 SUPERFAMILY SSF53850 87 297 1.9E-25 T 22-04-2016 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 Pfam PF03466 LysR substrate binding domain 88 298 1.6E-24 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 PANTHER PTHR30126:SF30 1 296 9.9E-92 T 22-04-2016 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 Gene3D G3DSA:3.40.190.10 86 197 2.8E-13 T 22-04-2016 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS01475 1214bbdf87810f2200e3cd30c6449b92 307 PANTHER PTHR30126 1 296 9.9E-92 T 22-04-2016 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 272 6.0E-101 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 Pfam PF00809 Pterin binding enzyme 19 258 4.3E-86 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 PANTHER PTHR20941:SF1 14 278 3.0E-126 T 22-04-2016 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 Gene3D G3DSA:3.20.20.20 13 275 6.0E-109 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 SUPERFAMILY SSF51717 7 275 3.53E-104 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SAMA_RS04990 c443f5b84700dc78c9f11c1978b29b2f 279 PANTHER PTHR20941 14 278 3.0E-126 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SUPERFAMILY SSF47226 6 126 2.36E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 4.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 615 4.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 572 4.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 596 4.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SMART SM00260 610 752 1.9E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:2.40.50.180 642 707 1.2E-9 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:3.30.565.10 433 617 8.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Pfam PF01627 Hpt domain 8 100 1.1E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:1.10.287.560 370 431 5.3E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SUPERFAMILY SSF55874 433 616 4.19E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SMART SM00387 475 618 1.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SUPERFAMILY SSF47384 371 431 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 617 4.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 371 430 4.0E-13 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SUPERFAMILY SSF50341 617 752 7.06E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:1.20.120.160 4 140 1.0E-42 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SMART SM01231 370 430 3.6E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PANTHER PTHR22617:SF6 207 758 5.3E-277 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PANTHER PTHR22617:SF6 1 152 5.3E-277 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 SMART SM00073 6 103 7.4E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Pfam PF01584 CheW-like domain 624 754 7.0E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:2.30.30.40 708 751 3.5E-22 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 Gene3D G3DSA:2.30.30.40 618 639 3.5E-22 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PANTHER PTHR22617 207 758 5.3E-277 T 22-04-2016 SAMA_RS11925 1328246ed1e50ae67e8e1f5f1508ec02 759 PANTHER PTHR22617 1 152 5.3E-277 T 22-04-2016 SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 Pfam PF00535 Glycosyl transferase family 2 116 297 3.2E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 PANTHER PTHR10587:SF63 340 602 1.7E-130 T 22-04-2016 SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 PANTHER PTHR10587:SF63 22 288 1.7E-130 T 22-04-2016 SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 PANTHER PTHR10587 340 602 1.7E-130 T 22-04-2016 SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 PANTHER PTHR10587 22 288 1.7E-130 T 22-04-2016 SAMA_RS08830 71d2b26cfe02e8ddfc4960663263c1e3 707 SUPERFAMILY SSF53448 114 402 9.79E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS07755 e45199151d3916384bb30f050a18d5d2 308 SUPERFAMILY SSF53335 14 280 1.82E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07755 e45199151d3916384bb30f050a18d5d2 308 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 18 300 9.5E-101 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SAMA_RS07755 e45199151d3916384bb30f050a18d5d2 308 Gene3D G3DSA:3.40.50.150 79 300 1.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07755 e45199151d3916384bb30f050a18d5d2 308 PANTHER PTHR11061:SF34 1 300 4.8E-88 T 22-04-2016 SAMA_RS07755 e45199151d3916384bb30f050a18d5d2 308 PANTHER PTHR11061 1 300 4.8E-88 T 22-04-2016 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 571 2.9E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 Gene3D G3DSA:3.30.70.270 414 573 2.1E-46 T 22-04-2016 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 PANTHER PTHR10799 327 571 6.3E-23 T 22-04-2016 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 PANTHER PTHR10799 613 621 6.3E-23 T 22-04-2016 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SMART SM00028 220 253 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SMART SM00028 260 293 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SMART SM00028 101 134 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 Gene3D G3DSA:1.25.40.10 101 203 1.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 Gene3D G3DSA:1.25.40.10 204 362 1.1E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SMART SM00267 402 573 3.5E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SUPERFAMILY SSF48452 135 323 5.69E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 569 2.1E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 SUPERFAMILY SSF55073 417 573 2.28E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 PANTHER PTHR10799:SF710 327 571 6.3E-23 T 22-04-2016 SAMA_RS12455 5afd1ed5b23f32f1b52a5bc68333f6bc 649 PANTHER PTHR10799:SF710 613 621 6.3E-23 T 22-04-2016 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 Pfam PF00072 Response regulator receiver domain 181 301 4.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 PANTHER PTHR22617 1 169 5.3E-87 T 22-04-2016 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 SMART SM00448 179 300 2.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 Pfam PF01584 CheW-like domain 21 155 2.9E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 SUPERFAMILY SSF52172 178 305 2.13E-28 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 Gene3D G3DSA:2.30.30.40 91 145 3.5E-5 T 22-04-2016 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 SMART SM00260 17 153 1.1E-19 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 PIRSF PIRSF002867 1 306 6.1E-105 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 PANTHER PTHR22617:SF30 1 169 5.3E-87 T 22-04-2016 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 SUPERFAMILY SSF50341 16 157 3.01E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS12140 c28cae0bdbecd517308f4a171b182ee8 306 Gene3D G3DSA:3.40.50.2300 177 304 6.4E-32 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 SMART SM00267 537 713 1.1E-54 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 Gene3D G3DSA:3.30.450.20 245 338 3.4E-15 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 PANTHER PTHR10799 581 710 1.5E-22 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 Pfam PF00990 Diguanylate cyclase, GGDEF domain 548 709 4.5E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 PANTHER PTHR10799:SF750 581 710 1.5E-22 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 PANTHER PTHR10799:SF750 33 157 1.5E-22 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 SUPERFAMILY SSF55073 553 712 7.06E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 Gene3D G3DSA:3.30.70.270 550 712 2.3E-48 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 544 712 2.3E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 PANTHER PTHR10799 33 157 1.5E-22 T 22-04-2016 SAMA_RS08100 23f8f198d0bc9a4c00e83c249967d708 729 Pfam PF02743 Cache domain 207 436 1.4E-12 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206:SF90 69 84 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206:SF90 478 491 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 418 435 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 366 385 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 268 294 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 142 166 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 54 70 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 35 54 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PRINTS PR01806 Virulence factor MviN signature 166 187 4.5E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PIRSF PIRSF002869 1 520 1.3E-152 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206 226 452 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206 69 84 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206 478 491 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 Pfam PF03023 MviN-like protein 30 475 3.6E-147 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 PANTHER PTHR11206:SF90 226 452 2.6E-97 T 22-04-2016 SAMA_RS04815 482eec21e9d87dfccf61752273dbb5d4 521 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 512 7.4E-137 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 3.7E-12 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 3.7E-12 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 3.7E-12 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.7E-12 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PANTHER PTHR35177:SF2 1 79 8.8E-29 T 22-04-2016 SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 Pfam PF01455 HupF/HypC family 1 67 6.9E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 80 1.6E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 PANTHER PTHR35177 1 79 8.8E-29 T 22-04-2016 SAMA_RS08730 8d9890caf21bc2551d4901ef49db1b61 86 SUPERFAMILY SSF159127 1 74 1.27E-23 T 22-04-2016 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:3.40.50.300 552 642 3.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:3.40.50.300 286 387 3.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 719 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:1.10.486.10 388 541 1.6E-51 T 22-04-2016 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:1.10.10.160 114 190 3.1E-22 T 22-04-2016 IPR013986 DExx box DNA helicase domain SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 PANTHER PTHR11070:SF7 6 719 6.3E-252 T 22-04-2016 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 4.1E-75 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 PANTHER PTHR11070 6 719 6.3E-252 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.2E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:3.40.50.300 5 110 3.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 Gene3D G3DSA:3.40.50.300 191 285 3.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02265 af827e460c5e35b4ed7225e767571069 721 SUPERFAMILY SSF52540 7 642 1.1E-184 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 PANTHER PTHR23083 183 370 8.7E-19 T 22-04-2016 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 SMART SM00028 303 336 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 SMART SM00028 201 234 46.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 SMART SM00028 235 268 0.014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 SMART SM00028 337 370 6.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 Pfam PF07719 Tetratricopeptide repeat 338 369 3.3E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 Gene3D G3DSA:1.25.40.10 61 88 1.3E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 Gene3D G3DSA:1.25.40.10 203 370 1.3E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 SUPERFAMILY SSF48452 201 372 2.28E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03465 d500acb3d5f598c7cd5e4adde541a4d0 386 Pfam PF13432 Tetratricopeptide repeat 241 287 4.1E-5 T 22-04-2016 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF08238 Sel1 repeat 388 419 56.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF08238 Sel1 repeat 246 279 5.9 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF08238 Sel1 repeat 312 346 0.03 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF08238 Sel1 repeat 159 205 2.5 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF08238 Sel1 repeat 208 242 200.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Gene3D G3DSA:1.25.40.10 344 419 1.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SMART SM00671 280 311 80.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SMART SM00671 244 279 5.7 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SMART SM00671 208 243 5.6 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SMART SM00671 386 421 110.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SMART SM00671 312 347 1.9E-4 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Pfam PF13643 Domain of unknown function (DUF4145) 25 109 4.0E-11 T 22-04-2016 IPR025285 Domain of unknown function DUF4145 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 PANTHER PTHR11102 137 471 1.8E-20 T 22-04-2016 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 PANTHER PTHR11102:SF88 137 471 1.8E-20 T 22-04-2016 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Gene3D G3DSA:1.25.40.10 278 343 3.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 Gene3D G3DSA:1.25.40.10 149 277 3.1E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS17950 1c3ed7a24b4ca11b60691d13da053f31 475 SUPERFAMILY SSF81901 205 425 1.4E-28 T 22-04-2016 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 Gene3D G3DSA:3.40.710.10 304 523 3.0E-49 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 382 6.4E-26 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 433 447 6.4E-26 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 497 510 6.4E-26 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 141 160 6.4E-26 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 418 432 6.4E-26 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 114 531 4.8E-94 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PANTHER PTHR30023:SF0 65 545 2.7E-79 T 22-04-2016 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 SUPERFAMILY SSF56601 112 545 4.07E-72 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 129 519 2.7E-83 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 Gene3D G3DSA:3.40.710.10 114 157 1.7E-4 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS09090 2a09dd7ddb12299ece55861d308b40d4 554 PANTHER PTHR30023 65 545 2.7E-79 T 22-04-2016 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 SUPERFAMILY SSF100879 241 345 2.94E-23 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 SUPERFAMILY SSF56672 1 233 5.6E-93 T 22-04-2016 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 PANTHER PTHR11076 1 338 1.1E-184 T 22-04-2016 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Pfam PF00817 impB/mucB/samB family 7 154 6.5E-49 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Gene3D G3DSA:1.10.150.20 166 234 2.1E-23 T 22-04-2016 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 345 6.3E-9 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Gene3D G3DSA:3.30.1490.100 237 345 7.3E-35 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Gene3D G3DSA:3.30.70.270 66 164 2.4E-34 T 22-04-2016 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Pfam PF11798 IMS family HHH motif 166 197 1.7E-7 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 Hamap MF_01113 DNA polymerase IV [dinB]. 1 353 36.941 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13185 21bcd99a9031b166e8b64c7d5b78f6c3 355 PANTHER PTHR11076:SF32 1 338 1.1E-184 T 22-04-2016 SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 Pfam PF01725 Ham1 family 4 189 4.1E-55 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 SUPERFAMILY SSF52972 1 193 4.19E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 194 49.288 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 Gene3D G3DSA:3.90.950.10 1 194 8.7E-77 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 190 1.7E-61 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 PANTHER PTHR11067 1 198 5.7E-84 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SAMA_RS12955 5358d7486ab3f287821964cadcd0980a 198 PANTHER PTHR11067:SF9 1 198 5.7E-84 T 22-04-2016 SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 Gene3D G3DSA:1.10.3210.10 334 506 8.2E-23 T 22-04-2016 IPR006674 HD domain SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 Pfam PF01966 HD domain 348 469 6.9E-17 T 22-04-2016 IPR006674 HD domain SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 SUPERFAMILY SSF52172 27 171 1.27E-12 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 Pfam PF11849 Domain of unknown function (DUF3369) 149 324 1.0E-51 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 SUPERFAMILY SSF109604 330 508 1.41E-40 T 22-04-2016 SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 SMART SM00471 342 479 1.7E-9 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 Pfam PF00072 Response regulator receiver domain 29 146 1.1E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS09325 dfff02c1f0807067c14b2be311ecf7f2 524 Gene3D G3DSA:3.40.50.2300 28 154 2.0E-14 T 22-04-2016 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 340 5.3E-139 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 341 43.771 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 PANTHER PTHR11647:SF59 4 342 7.2E-172 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 Gene3D G3DSA:3.20.20.140 3 340 4.3E-135 T 22-04-2016 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 Pfam PF01979 Amidohydrolase family 11 308 1.3E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 243 254 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 PIRSF PIRSF001237 1 342 2.7E-139 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 PANTHER PTHR11647 4 342 7.2E-172 T 22-04-2016 SAMA_RS14985 451dea359694efd4a28b55e1ea13e613 342 SUPERFAMILY SSF51556 1 341 4.99E-146 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 PANTHER PTHR10192 5 177 1.3E-89 T 22-04-2016 SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 5.3E-34 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 SUPERFAMILY SSF53218 8 169 1.31E-46 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 PANTHER PTHR10192:SF18 5 177 1.3E-89 T 22-04-2016 SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 PIRSF PIRSF006443 1 167 6.4E-62 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 Gene3D G3DSA:3.40.980.10 7 170 8.1E-49 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 SMART SM00852 15 159 1.6E-28 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 1.5E-80 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 SAMA_RS18325 57750fde65bc8bea282ed3c0976581ed 178 Pfam PF00994 Probable molybdopterin binding domain 15 157 1.2E-31 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS11055 949f84786809acede03fab1ab0541073 281 SUPERFAMILY SSF74650 7 278 1.26E-61 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SAMA_RS11055 949f84786809acede03fab1ab0541073 281 PIRSF PIRSF016020 7 280 2.4E-54 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SAMA_RS11055 949f84786809acede03fab1ab0541073 281 Pfam PF01263 Aldose 1-epimerase 19 278 1.2E-39 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SAMA_RS11055 949f84786809acede03fab1ab0541073 281 PANTHER PTHR11122 1 280 2.9E-96 T 22-04-2016 SAMA_RS11055 949f84786809acede03fab1ab0541073 281 Gene3D G3DSA:2.70.98.10 4 279 1.5E-75 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS11055 949f84786809acede03fab1ab0541073 281 PANTHER PTHR11122:SF14 1 280 2.9E-96 T 22-04-2016 SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 Pfam PF01740 STAS domain 438 514 2.1E-6 T 22-04-2016 IPR002645 STAS domain SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 Gene3D G3DSA:3.30.750.24 438 513 4.0E-8 T 22-04-2016 IPR002645 STAS domain SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 PANTHER PTHR11814:SF97 15 512 3.7E-221 T 22-04-2016 SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 SUPERFAMILY SSF52091 440 540 1.65E-10 T 22-04-2016 IPR002645 STAS domain SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 Pfam PF00916 Sulfate permease family 14 378 2.0E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SAMA_RS03960 e70b246c9eb367e472d082bc9605e8ae 573 PANTHER PTHR11814 15 512 3.7E-221 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 SUPERFAMILY SSF52540 1 225 6.65E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 Pfam PF00005 ABC transporter 21 169 1.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 PANTHER PTHR24220 3 219 4.0E-126 T 22-04-2016 SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 Gene3D G3DSA:3.40.50.300 1 227 9.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 SMART SM00382 30 217 5.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS14955 cb704f6d4b1cec29720f99f425549208 230 PANTHER PTHR24220:SF342 3 219 4.0E-126 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Pfam PF13620 Carboxypeptidase regulatory-like domain 43 120 1.0E-16 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF56935 132 628 4.4E-70 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF56935 661 710 4.4E-70 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF56935 752 808 4.4E-70 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF56935 836 879 4.4E-70 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF56935 910 969 4.4E-70 T 22-04-2016 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.170.130.10 128 250 9.1E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 SUPERFAMILY SSF49452 37 119 3.14E-11 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 668 748 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 780 877 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 533 625 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 292 499 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 912 1000 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.40.170.20 251 259 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Gene3D G3DSA:2.60.40.1120 43 127 3.2E-12 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SAMA_RS16735 aa18e2adc3ef7bb2fbc210897b8c290b 1001 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 247 3.2E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 Gene3D G3DSA:3.40.366.10 3 122 4.7E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 Gene3D G3DSA:3.40.366.10 197 299 4.7E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 SUPERFAMILY SSF55048 128 197 5.62E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 2.3E-42 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 PIRSF PIRSF000446 1 308 1.1E-131 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 SUPERFAMILY SSF52151 198 299 1.67E-77 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 SUPERFAMILY SSF52151 3 128 1.67E-77 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 Pfam PF00698 Acyl transferase domain 6 293 2.2E-38 T 22-04-2016 IPR014043 Acyl transferase SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 Gene3D G3DSA:3.30.70.250 125 196 1.3E-29 T 22-04-2016 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 4.2E-123 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SAMA_RS10345 c057ed9199ee78d6dfa4f6a81e3afb8a 308 PANTHER PTHR10982 1 308 2.6E-161 T 22-04-2016 SAMA_RS14625 b2e0a1488f351f991261886cdc6cf515 286 Pfam PF06629 MltA-interacting protein MipA 38 286 2.1E-47 T 22-04-2016 IPR010583 MltA-interacting MipA SAMA_RS14625 b2e0a1488f351f991261886cdc6cf515 286 PANTHER PTHR38776 2 110 1.4E-61 T 22-04-2016 SAMA_RS14625 b2e0a1488f351f991261886cdc6cf515 286 PANTHER PTHR38776 135 286 1.4E-61 T 22-04-2016 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 ProSitePatterns PS01218 TatC family signature. 153 172 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 6.5E-48 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 6.5E-48 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 6.5E-48 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 6.5E-48 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PANTHER PTHR30371 5 246 4.1E-107 T 22-04-2016 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 1.5E-62 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 225 8.1E-72 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 PANTHER PTHR30371:SF0 5 246 4.1E-107 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS16705 98d42e33eb3d1316a615f4657377776b 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 240 17.506 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 SUPERFAMILY SSF55874 307 475 8.51E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 SMART SM00388 253 317 2.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 Gene3D G3DSA:1.10.287.130 253 304 1.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 SUPERFAMILY SSF47384 251 316 3.73E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 9.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 9.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 9.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 PANTHER PTHR24423 228 474 2.2E-47 T 22-04-2016 SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 475 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 Gene3D G3DSA:3.30.565.10 305 476 5.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 SMART SM00387 365 477 1.8E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19120 4d7e589b779e318fbec0127cbe1e81a1 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 316 8.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 SUPERFAMILY SSF52172 3 188 8.97E-40 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 SMART SM00448 3 114 5.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 SUPERFAMILY SSF46689 356 443 3.27E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 5.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 5.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Pfam PF00072 Response regulator receiver domain 5 114 5.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 SMART SM00382 163 306 7.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Gene3D G3DSA:3.40.50.300 142 315 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 SUPERFAMILY SSF52540 143 375 1.43E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Gene3D G3DSA:1.10.10.60 367 440 1.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 2.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Gene3D G3DSA:3.40.50.2300 3 127 5.0E-32 T 22-04-2016 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 PANTHER PTHR32071 1 443 6.3E-177 T 22-04-2016 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Pfam PF00158 Sigma-54 interaction domain 143 309 7.3E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 Gene3D G3DSA:1.10.8.60 316 366 2.1E-22 T 22-04-2016 SAMA_RS08075 767cc47a66c681d259e3aef4d9034f2a 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 289 3.9E-128 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 Gene3D G3DSA:3.20.20.60 3 286 1.8E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 SUPERFAMILY SSF51621 4 288 3.81E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 252 9.1E-49 T 22-04-2016 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 PANTHER PTHR21631:SF4 2 293 1.3E-152 T 22-04-2016 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 PANTHER PTHR21631 2 293 1.3E-152 T 22-04-2016 SAMA_RS17165 745f0ca751d38079c97d0937505c052d 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 290 50.279 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423 358 414 1.6E-262 T 22-04-2016 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423 463 700 1.6E-262 T 22-04-2016 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423 1 302 1.6E-262 T 22-04-2016 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Gene3D G3DSA:1.10.287.130 463 530 1.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 5.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 5.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 685 5.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 666 5.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 580 684 7.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 SUPERFAMILY SSF55874 535 684 2.49E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Pfam PF17202 Single cache domain 3 219 335 3.2E-26 T 22-04-2016 IPR033463 Single cache domain 3 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 SMART SM00388 467 534 2.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Gene3D G3DSA:3.30.565.10 540 683 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 SMART SM00387 577 688 2.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Pfam PF00512 His Kinase A (phospho-acceptor) domain 467 532 2.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 SUPERFAMILY SSF47384 462 531 2.94E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 SUPERFAMILY SSF103190 172 327 8.37E-14 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 Pfam PF00672 HAMP domain 345 415 7.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423:SF532 358 414 1.6E-262 T 22-04-2016 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423:SF532 463 700 1.6E-262 T 22-04-2016 SAMA_RS00635 045ddd4a8811f5f1bb595e2ef63878b0 708 PANTHER PTHR24423:SF532 1 302 1.6E-262 T 22-04-2016 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 224 5.5E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 Gene3D G3DSA:3.30.950.10 129 259 2.3E-46 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 PANTHER PTHR21091 12 256 4.8E-81 T 22-04-2016 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 SUPERFAMILY SSF53790 11 258 2.22E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 Gene3D G3DSA:3.40.1010.10 12 128 3.1E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 PANTHER PTHR21091:SF16 12 256 4.8E-81 T 22-04-2016 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 247 1.0E-92 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS15100 ce9ea1af6e75ee8a5825d94bfb19c9a5 269 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Pfam PF00593 TonB dependent receptor 639 1008 2.3E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 8.5E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.40.170.20 536 671 1.9E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.40.170.20 716 1009 1.9E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.40.170.20 434 494 1.9E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.40.170.20 337 372 1.9E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.40.170.20 183 249 1.9E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 992 1009 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 941 1009 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 807 910 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 726 772 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 338 389 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 424 668 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 SUPERFAMILY SSF56935 42 240 1.94E-86 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 Gene3D G3DSA:2.170.130.10 65 182 2.0E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069 18 543 6.0E-196 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069 728 1003 6.0E-196 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069 573 711 6.0E-196 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069:SF2 18 543 6.0E-196 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069:SF2 728 1003 6.0E-196 T 22-04-2016 SAMA_RS03585 78d10924ba1cda23c2afed8da4abcc36 1009 PANTHER PTHR30069:SF2 573 711 6.0E-196 T 22-04-2016 SAMA_RS13020 38e5b82e43606250b0b32ae43943c3d5 214 Pfam PF01292 Prokaryotic cytochrome b561 7 210 1.2E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS13020 38e5b82e43606250b0b32ae43943c3d5 214 SUPERFAMILY SSF81342 163 213 2.9E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS13020 38e5b82e43606250b0b32ae43943c3d5 214 SUPERFAMILY SSF81342 4 127 2.9E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS13020 38e5b82e43606250b0b32ae43943c3d5 214 Gene3D G3DSA:1.20.950.20 35 123 8.3E-4 T 22-04-2016 SAMA_RS13020 38e5b82e43606250b0b32ae43943c3d5 214 Gene3D G3DSA:1.20.950.20 163 213 8.3E-4 T 22-04-2016 SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 PANTHER PTHR24220:SF432 3 240 2.9E-112 T 22-04-2016 SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 PANTHER PTHR24220 3 240 2.9E-112 T 22-04-2016 SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 SMART SM00382 26 217 2.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 Gene3D G3DSA:3.40.50.300 1 226 2.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 Pfam PF00005 ABC transporter 17 160 4.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS18580 3ba2e85e47165dc08e0b15f3d8b69afa 244 SUPERFAMILY SSF52540 2 224 3.77E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11355 91d3b0aa6b431e9d3448fd3713f115d2 540 Pfam PF13584 Oxygen tolerance 17 454 8.4E-89 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD SAMA_RS11355 91d3b0aa6b431e9d3448fd3713f115d2 540 PANTHER PTHR40940:SF1 1 422 2.0E-74 T 22-04-2016 SAMA_RS11355 91d3b0aa6b431e9d3448fd3713f115d2 540 PANTHER PTHR40940 1 422 2.0E-74 T 22-04-2016 SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 PANTHER PTHR10799 126 382 3.5E-28 T 22-04-2016 SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 SMART SM00267 211 383 2.6E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 Gene3D G3DSA:3.30.70.270 224 384 1.1E-51 T 22-04-2016 SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 SUPERFAMILY SSF55073 227 384 6.91E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 382 1.8E-49 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 PANTHER PTHR10799:SF750 126 382 3.5E-28 T 22-04-2016 SAMA_RS19080 cb331a364dbf10769b99d061dbb81912 392 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 379 3.2E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02255 ff5c5dd88b1af20e457162f0112499af 314 Pfam PF02574 Homocysteine S-methyltransferase 17 309 2.5E-37 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS02255 ff5c5dd88b1af20e457162f0112499af 314 PANTHER PTHR11103:SF7 1 308 1.2E-47 T 22-04-2016 SAMA_RS02255 ff5c5dd88b1af20e457162f0112499af 314 PANTHER PTHR11103 1 308 1.2E-47 T 22-04-2016 SAMA_RS02255 ff5c5dd88b1af20e457162f0112499af 314 Gene3D G3DSA:3.20.20.330 9 310 5.3E-44 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS02255 ff5c5dd88b1af20e457162f0112499af 314 SUPERFAMILY SSF82282 6 310 3.79E-59 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 160 3.8E-32 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 SUPERFAMILY SSF88723 1 160 7.61E-40 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 164 252 7.1E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 Hamap MF_01192 Flap endonuclease Xni [xni]. 1 252 39.277 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 SMART SM00279 163 198 2.1E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 Gene3D G3DSA:3.40.50.1010 3 175 1.1E-44 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 SUPERFAMILY SSF47807 160 251 5.68E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 SMART SM00475 2 251 6.7E-68 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 Gene3D G3DSA:1.10.150.20 176 236 2.6E-22 T 22-04-2016 SAMA_RS12645 8d143c01c218515e40ffb6418f21ad25 253 PANTHER PTHR10133 2 252 5.3E-63 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Pfam PF13424 Tetratricopeptide repeat 191 263 3.4E-14 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Pfam PF13424 Tetratricopeptide repeat 271 343 1.7E-8 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Pfam PF13424 Tetratricopeptide repeat 118 182 8.6E-12 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PANTHER PTHR24423 505 722 1.0E-55 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00387 615 723 1.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Gene3D G3DSA:1.25.40.10 169 352 4.7E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Gene3D G3DSA:1.25.40.10 393 421 4.7E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Gene3D G3DSA:1.25.40.10 46 168 4.1E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 721 2.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Gene3D G3DSA:3.30.565.10 578 722 1.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00388 507 571 1.4E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SUPERFAMILY SSF47384 495 569 1.67E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 312 345 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 392 425 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 72 105 0.013 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 192 225 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 112 145 0.062 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 152 185 0.0068 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 272 305 96.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SMART SM00028 232 265 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Gene3D G3DSA:1.10.287.130 500 565 5.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PANTHER PTHR24423:SF564 505 722 1.0E-55 T 22-04-2016 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 Pfam PF00512 His Kinase A (phospho-acceptor) domain 507 568 2.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SUPERFAMILY SSF55874 561 723 3.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 703 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 722 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SUPERFAMILY SSF48452 230 442 2.32E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS19060 0621d1812247757ff8efa781f595922c 723 SUPERFAMILY SSF48452 52 269 4.93E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 Gene3D G3DSA:2.70.98.10 20 343 7.2E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 PANTHER PTHR12143:SF22 1 740 5.3E-122 T 22-04-2016 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 Gene3D G3DSA:1.20.1610.10 462 601 5.7E-50 T 22-04-2016 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 Gene3D G3DSA:1.20.1050.60 367 457 3.6E-34 T 22-04-2016 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 PANTHER PTHR12143 1 740 5.3E-122 T 22-04-2016 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 Pfam PF07971 Glycosyl hydrolase family 92 261 739 1.6E-159 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 Gene3D G3DSA:3.30.2080.10 602 739 5.5E-45 T 22-04-2016 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 SUPERFAMILY SSF48208 284 730 3.97E-32 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS01555 66e5ddbffa7316bd95a16524ea3f2f0f 740 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 19 739 4.6E-216 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 Gene3D G3DSA:1.20.1050.10 98 212 1.3E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 SUPERFAMILY SSF47616 83 211 4.87E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 Gene3D G3DSA:3.40.30.10 1 97 1.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 PANTHER PTHR11260:SF289 1 213 4.1E-101 T 22-04-2016 SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 SUPERFAMILY SSF52833 1 91 2.93E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 212 9.2E-86 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 PANTHER PTHR11260 1 213 4.1E-101 T 22-04-2016 SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 78 2.4E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS11635 9079d5f7648ce9106b412ea2ebd56d3d 213 Pfam PF13410 Glutathione S-transferase, C-terminal domain 137 179 7.9E-7 T 22-04-2016 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 Gene3D G3DSA:2.40.240.20 1 70 1.3E-23 T 22-04-2016 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 Pfam PF04452 RNA methyltransferase 19 236 9.4E-74 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 1.2E-77 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 PANTHER PTHR30027:SF3 1 243 1.8E-97 T 22-04-2016 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 PANTHER PTHR30027 1 243 1.8E-97 T 22-04-2016 SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 SUPERFAMILY SSF75217 75 242 1.57E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 Gene3D G3DSA:3.40.1280.10 75 242 1.3E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 SUPERFAMILY SSF88697 2 70 2.49E-16 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS03060 19dc9de1d95d33ab55762b901581015f 243 PIRSF PIRSF015601 4 242 5.1E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS05850 a5e75de32ed6f9bfc28e6f4b4603fec1 272 SUPERFAMILY SSF46689 29 120 7.97E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 Gene3D G3DSA:1.20.1250.20 8 186 7.3E-28 T 22-04-2016 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 Pfam PF07690 Major Facilitator Superfamily 10 354 2.1E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 59 76 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 PANTHER PTHR23502:SF19 2 387 4.1E-115 T 22-04-2016 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 385 2.8E-74 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 PANTHER PTHR23502 2 387 4.1E-115 T 22-04-2016 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 Gene3D G3DSA:1.20.1250.20 202 386 1.6E-10 T 22-04-2016 SAMA_RS17935 61b97478a60c51ca855b5cae7b6fd655 400 SUPERFAMILY SSF103473 3 388 1.96E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 PANTHER PTHR21581 12 299 7.9E-145 T 22-04-2016 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 SUPERFAMILY SSF56601 7 276 4.56E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.1E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.1E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.1E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 PANTHER PTHR21581:SF8 12 299 7.9E-145 T 22-04-2016 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 260 1.1E-69 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SAMA_RS00365 cd2467badc00ff2d9d3dfedac8c429d8 303 Gene3D G3DSA:3.40.710.10 20 275 1.5E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 Gene3D G3DSA:1.20.1050.40 54 183 6.0E-19 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 PANTHER PTHR11804 44 717 0.0 T 22-04-2016 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 Gene3D G3DSA:1.10.1370.10 185 390 2.4E-115 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 Gene3D G3DSA:1.10.1370.10 543 717 2.4E-115 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 Gene3D G3DSA:3.40.390.10 401 542 9.2E-47 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 PANTHER PTHR11804:SF47 44 717 0.0 T 22-04-2016 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 Pfam PF01432 Peptidase family M3 269 716 2.1E-129 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SAMA_RS06145 7b5f0babde0afe95e354e30e2e318907 718 SUPERFAMILY SSF55486 52 716 5.13E-177 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 Gene3D G3DSA:2.40.170.20 175 758 3.8E-92 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 Pfam PF00593 TonB dependent receptor 487 756 1.1E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 PANTHER PTHR32552 471 758 1.0E-70 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 PANTHER PTHR32552 11 444 1.0E-70 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 1.6E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 Gene3D G3DSA:2.170.130.10 34 169 1.3E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 SUPERFAMILY SSF56935 34 447 4.76E-118 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 SUPERFAMILY SSF56935 477 758 4.76E-118 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 PANTHER PTHR32552:SF33 471 758 1.0E-70 T 22-04-2016 SAMA_RS02785 0274cc0917ee8ff549710af36da8990d 758 PANTHER PTHR32552:SF33 11 444 1.0E-70 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 Pfam PF08220 DeoR-like helix-turn-helix domain 11 62 1.9E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 Pfam PF00455 DeoR C terminal sensor domain 80 233 2.7E-41 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 9.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 9.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 SUPERFAMILY SSF46785 8 60 7.06E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 PANTHER PTHR30363:SF1 7 257 1.4E-51 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 PANTHER PTHR30363 7 257 1.4E-51 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 Gene3D G3DSA:1.10.10.10 10 79 3.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 Gene3D G3DSA:3.40.50.1360 80 218 2.9E-7 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 SUPERFAMILY SSF100950 80 233 3.35E-21 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 SMART SM01134 76 237 2.9E-54 T 22-04-2016 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 SMART SM00420 11 63 2.8E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS15245 8ee9cf1daa00921ce4c7dcb6094daaa1 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 Gene3D G3DSA:3.90.1150.10 271 368 7.7E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 PANTHER PTHR11601 14 368 5.7E-87 T 22-04-2016 SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 PANTHER PTHR11601:SF31 14 368 5.7E-87 T 22-04-2016 SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 Pfam PF00266 Aminotransferase class-V 133 363 7.2E-25 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 Gene3D G3DSA:3.40.640.10 43 270 4.9E-37 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS17780 7acb72fa931cdb1dbdf2cd9a8c3adfca 371 SUPERFAMILY SSF53383 8 370 1.58E-63 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Gene3D G3DSA:3.40.50.720 303 496 3.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 SUPERFAMILY SSF48179 494 605 1.87E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 PANTHER PTHR23309 8 714 0.0 T 22-04-2016 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 PANTHER PTHR23309:SF18 8 714 0.0 T 22-04-2016 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 493 1.1E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 SUPERFAMILY SSF48179 624 713 1.19E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 713 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Gene3D G3DSA:1.10.1040.10 631 709 1.9E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 SUPERFAMILY SSF52096 1 303 2.67E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 207 6.7E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Gene3D G3DSA:3.90.226.10 4 218 7.2E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 495 591 5.8E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 714 52.961 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 Gene3D G3DSA:1.10.1040.10 497 592 2.7E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 SUPERFAMILY SSF51735 310 494 1.06E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00150 7a2ff547ab13596f00a7c2dc04bdd0bd 716 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 492 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 SUPERFAMILY SSF55347 182 488 1.21E-116 T 22-04-2016 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 SUPERFAMILY SSF51735 8 190 3.54E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 490 88.81 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PIRSF PIRSF000110 1 490 3.3E-181 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 177 183 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PANTHER PTHR23429:SF0 11 490 2.5E-234 T 22-04-2016 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 488 3.3E-119 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 Gene3D G3DSA:3.30.360.10 187 488 1.2E-124 T 22-04-2016 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 187 1.3E-56 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 489 5.1E-193 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PANTHER PTHR23429 11 490 2.5E-234 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 328 354 3.6E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 195 3.6E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 143 156 3.6E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 253 3.6E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 219 236 3.6E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SAMA_RS09455 8c2abff81933cd5d232e48ad4ec17b59 490 Gene3D G3DSA:3.40.50.720 9 186 6.7E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS12810 49f1f148083529557b522221b317c281 731 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 214 1.3E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SAMA_RS12810 49f1f148083529557b522221b317c281 731 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 731 3.2E-264 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12810 49f1f148083529557b522221b317c281 731 SUPERFAMILY SSF51445 187 625 1.15E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS12810 49f1f148083529557b522221b317c281 731 PIRSF PIRSF000463 13 731 2.0E-277 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12810 49f1f148083529557b522221b317c281 731 Gene3D G3DSA:3.20.20.80 245 620 8.5E-89 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS12810 49f1f148083529557b522221b317c281 731 SUPERFAMILY SSF81296 23 122 1.82E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS12810 49f1f148083529557b522221b317c281 731 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 108 731 41.795 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12810 49f1f148083529557b522221b317c281 731 Gene3D G3DSA:2.60.40.10 20 110 2.3E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS12810 49f1f148083529557b522221b317c281 731 Gene3D G3DSA:2.60.40.10 120 228 7.3E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS12810 49f1f148083529557b522221b317c281 731 PANTHER PTHR10357 56 731 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS12810 49f1f148083529557b522221b317c281 731 PANTHER PTHR10357:SF158 56 731 0.0 T 22-04-2016 SAMA_RS12810 49f1f148083529557b522221b317c281 731 SMART SM00642 257 598 6.1E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS12810 49f1f148083529557b522221b317c281 731 Gene3D G3DSA:2.60.40.1180 635 731 1.4E-29 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SAMA_RS12810 49f1f148083529557b522221b317c281 731 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 637 731 1.4E-22 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SAMA_RS12810 49f1f148083529557b522221b317c281 731 Pfam PF00128 Alpha amylase, catalytic domain 284 353 6.0E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS12810 49f1f148083529557b522221b317c281 731 SUPERFAMILY SSF51011 634 731 6.48E-30 T 22-04-2016 SAMA_RS11045 45c021a4183af27d19c93b165a94021a 165 SUPERFAMILY SSF141523 29 163 5.23E-26 T 22-04-2016 SAMA_RS11045 45c021a4183af27d19c93b165a94021a 165 Pfam PF03734 L,D-transpeptidase catalytic domain 29 163 2.7E-21 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SAMA_RS11045 45c021a4183af27d19c93b165a94021a 165 PANTHER PTHR36699 1 165 9.3E-60 T 22-04-2016 SAMA_RS11045 45c021a4183af27d19c93b165a94021a 165 Gene3D G3DSA:2.40.440.10 23 163 5.4E-22 T 22-04-2016 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.9E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.6E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.6E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.6E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.6E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.0E-21 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SAMA_RS05005 f7988f987a268eb4b257997fb7cc29fb 108 PANTHER PTHR34182 2 100 6.0E-30 T 22-04-2016 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 SUPERFAMILY SSF47928 3 103 2.22E-25 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 7.4E-55 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 3.4E-49 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.9E-25 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.9E-25 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.9E-25 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.9E-25 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.9E-25 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 PANTHER PTHR11910 7 176 4.2E-49 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SAMA_RS18960 d59567c33fde7e4c8618e3046a1745b2 177 Gene3D G3DSA:1.10.520.20 2 102 5.6E-32 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SAMA_RS05760 59b148fe558516d8838f848b05280777 139 PANTHER PTHR23091 42 136 2.6E-13 T 22-04-2016 SAMA_RS05760 59b148fe558516d8838f848b05280777 139 SUPERFAMILY SSF55729 32 136 1.37E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05760 59b148fe558516d8838f848b05280777 139 Gene3D G3DSA:3.40.630.30 41 136 1.2E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05760 59b148fe558516d8838f848b05280777 139 Pfam PF00583 Acetyltransferase (GNAT) family 43 114 5.3E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 Gene3D G3DSA:1.20.200.10 140 402 9.4E-88 T 22-04-2016 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 Gene3D G3DSA:1.10.40.30 408 462 5.5E-17 T 22-04-2016 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 Pfam PF00206 Lyase 14 342 7.2E-101 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 Gene3D G3DSA:1.10.275.10 2 139 2.1E-54 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 Pfam PF10415 Fumarase C C-terminus 408 460 1.9E-16 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 SUPERFAMILY SSF48557 2 460 1.37E-144 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PANTHER PTHR11444 2 462 6.2E-235 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PANTHER PTHR11444:SF25 2 462 6.2E-235 T 22-04-2016 SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 1.0E-28 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.0E-28 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.0E-28 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04140 bad4233c7c399a8e11bfe1dd0049586d 472 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.0E-28 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357 577 644 2.0E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357 228 560 2.0E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357 183 203 2.0E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 SMART SM00642 189 592 7.0E-69 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 SUPERFAMILY SSF51445 184 601 2.19E-95 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Gene3D G3DSA:3.20.20.80 185 601 2.8E-95 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Gene3D G3DSA:2.60.40.10 75 169 4.1E-22 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 SUPERFAMILY SSF51011 602 675 1.87E-10 T 22-04-2016 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357:SF11 577 644 2.0E-82 T 22-04-2016 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357:SF11 228 560 2.0E-82 T 22-04-2016 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 PANTHER PTHR10357:SF11 183 203 2.0E-82 T 22-04-2016 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 SUPERFAMILY SSF81296 78 172 7.42E-20 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Pfam PF00128 Alpha amylase, catalytic domain 231 543 5.5E-55 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Gene3D G3DSA:2.60.40.1180 602 682 1.9E-15 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 603 679 1.0E-17 T 22-04-2016 IPR019492 Cyclo-malto-dextrinase, C-terminal UniPathway: UPA00153 SAMA_RS08670 f7428cfc7ad9aff19b2d6a09dcb83752 683 Pfam PF09087 Cyclomaltodextrinase, N-terminal 80 171 5.9E-22 T 22-04-2016 IPR015171 Cyclomaltodextrinase, N-terminal UniPathway: UPA00153 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PANTHER PTHR11444:SF17 4 456 0.0 T 22-04-2016 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 9.6E-50 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 Gene3D G3DSA:1.20.200.10 120 389 1.1E-89 T 22-04-2016 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.7E-137 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 Pfam PF00206 Lyase 14 312 6.9E-69 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 Gene3D G3DSA:1.10.40.30 390 445 1.1E-30 T 22-04-2016 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 SUPERFAMILY SSF48557 4 448 8.33E-104 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 PANTHER PTHR11444 4 456 0.0 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS10760 ef7f84d616631b1336fef1a4bdd680a1 456 Gene3D G3DSA:1.10.275.10 1 119 3.8E-47 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS05900 2a909303664fbb8aceddf16356817391 213 Pfam PF00583 Acetyltransferase (GNAT) family 126 189 1.6E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS05900 2a909303664fbb8aceddf16356817391 213 Gene3D G3DSA:3.40.630.30 14 209 3.8E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05900 2a909303664fbb8aceddf16356817391 213 SUPERFAMILY SSF55729 14 204 9.07E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS01790 0d6935aca5f40037786134388af1c3f6 580 Gene3D G3DSA:1.25.40.10 62 207 1.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01790 0d6935aca5f40037786134388af1c3f6 580 SUPERFAMILY SSF48452 57 208 8.85E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01790 0d6935aca5f40037786134388af1c3f6 580 SUPERFAMILY SSF48452 226 377 1.07E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01790 0d6935aca5f40037786134388af1c3f6 580 SUPERFAMILY SSF55073 458 566 1.49E-5 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS01790 0d6935aca5f40037786134388af1c3f6 580 Gene3D G3DSA:1.25.40.10 227 375 2.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 PIRSF PIRSF004486 1 312 2.8E-103 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 PANTHER PTHR11265:SF0 5 313 8.1E-149 T 22-04-2016 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 Gene3D G3DSA:3.40.50.150 217 311 2.4E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 Gene3D G3DSA:3.40.50.150 7 111 2.4E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 PANTHER PTHR11265 5 313 8.1E-149 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 Gene3D G3DSA:1.10.150.170 113 216 9.8E-38 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.214 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 2.1E-124 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 Pfam PF01795 MraW methylase family 5 310 1.9E-115 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 SUPERFAMILY SSF81799 115 214 7.19E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 SUPERFAMILY SSF53335 214 311 5.65E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01850 7ab5815d1ab4075b1d103eb40202bb70 313 SUPERFAMILY SSF53335 7 114 5.65E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Gene3D G3DSA:3.30.460.10 56 151 9.2E-10 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 PANTHER PTHR13734:SF45 76 670 7.5E-141 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SUPERFAMILY SSF109604 402 571 2.35E-12 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SUPERFAMILY SSF55021 671 745 1.75E-8 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 856 335.311 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SUPERFAMILY SSF55021 781 841 4.0E-7 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SUPERFAMILY SSF81593 182 295 8.63E-11 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 PANTHER PTHR13734 76 670 7.5E-141 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Gene3D G3DSA:3.30.70.260 784 839 2.6E-6 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Gene3D G3DSA:3.30.70.260 674 743 9.0E-5 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SMART SM00471 430 577 5.9E-5 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Pfam PF08335 GlnD PII-uridylyltransferase 163 299 1.8E-36 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Pfam PF01842 ACT domain 675 726 1.9E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 20 851 3.5E-288 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Gene3D G3DSA:1.10.3210.10 404 595 1.4E-23 T 22-04-2016 IPR006674 HD domain SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 PIRSF PIRSF006288 1 855 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 SUPERFAMILY SSF81301 21 159 1.28E-22 T 22-04-2016 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Pfam PF01909 Nucleotidyltransferase domain 56 89 4.6E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SAMA_RS05960 27bd5e9eb773e645f089cf0ed3e79144 856 Pfam PF01966 HD domain 436 566 9.0E-10 T 22-04-2016 IPR006674 HD domain SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 Pfam PF00459 Inositol monophosphatase family 4 246 1.9E-47 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.2E-13 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 1.2E-13 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 1.2E-13 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.2E-13 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PANTHER PTHR20854 1 267 1.3E-87 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 PANTHER PTHR20854:SF5 1 267 1.3E-87 T 22-04-2016 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 SUPERFAMILY SSF56655 4 267 9.29E-78 T 22-04-2016 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 256 6.9E-90 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 Gene3D G3DSA:3.40.190.80 168 259 5.0E-34 T 22-04-2016 SAMA_RS00930 b1f1b787edc2fa5d56e38411b1bb9416 270 Gene3D G3DSA:3.30.540.10 2 167 5.9E-44 T 22-04-2016 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Gene3D G3DSA:3.30.450.20 171 283 4.7E-9 T 22-04-2016 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SUPERFAMILY SSF47384 296 365 5.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Gene3D G3DSA:1.10.287.130 297 353 2.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Gene3D G3DSA:3.30.565.10 354 532 8.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 1.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 1.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 1.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SMART SM00388 302 367 7.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SUPERFAMILY SSF55874 358 533 6.68E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 PANTHER PTHR24423 171 671 7.3E-95 T 22-04-2016 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 531 8.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SUPERFAMILY SSF55785 189 293 1.43E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Pfam PF13426 PAS domain 188 285 6.4E-10 T 22-04-2016 IPR000014 PAS domain SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Pfam PF00072 Response regulator receiver domain 559 667 5.6E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Gene3D G3DSA:3.40.50.2300 553 671 2.7E-17 T 22-04-2016 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 PANTHER PTHR24423:SF438 171 671 7.3E-95 T 22-04-2016 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 366 5.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SMART SM00448 556 668 5.5E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SUPERFAMILY SSF52172 554 671 1.57E-17 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS04740 4b7de53dc30a98dcf37127053ed2419f 680 SMART SM00387 408 533 4.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 Gene3D G3DSA:3.40.50.1100 63 158 7.7E-24 T 22-04-2016 SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 Gene3D G3DSA:3.40.50.1100 159 348 6.5E-35 T 22-04-2016 SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 PANTHER PTHR10314 14 365 6.1E-195 T 22-04-2016 SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 SUPERFAMILY SSF53686 39 350 4.45E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 PANTHER PTHR10314:SF126 14 365 6.1E-195 T 22-04-2016 SAMA_RS09530 0862d837453a64fa84bd491f40f0f421 369 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 331 9.2E-43 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS02135 30585594879fb2c22b8cd30c048314a7 1074 SMART SM01276 540 865 2.5E-53 T 22-04-2016 IPR031161 Peptidase family M60 domain SAMA_RS02135 30585594879fb2c22b8cd30c048314a7 1074 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 522 801 8.0E-17 T 22-04-2016 IPR031161 Peptidase family M60 domain SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 379.473 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 8.5E-289 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 PANTHER PTHR10283 12 167 1.1E-285 T 22-04-2016 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 PANTHER PTHR10283 196 521 1.1E-285 T 22-04-2016 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 PANTHER PTHR10283:SF93 12 167 1.1E-285 T 22-04-2016 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 PANTHER PTHR10283:SF93 196 521 1.1E-285 T 22-04-2016 SAMA_RS10070 14ebd110656bda93c0158dd241a045ab 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.2E-264 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SAMA_RS18450 63dbd3f5ef02382b8c9ac405a63f794d 284 SUPERFAMILY SSF51735 2 230 5.44E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS18450 63dbd3f5ef02382b8c9ac405a63f794d 284 PANTHER PTHR14194 2 282 2.3E-54 T 22-04-2016 SAMA_RS18450 63dbd3f5ef02382b8c9ac405a63f794d 284 PANTHER PTHR14194:SF73 2 282 2.3E-54 T 22-04-2016 SAMA_RS18450 63dbd3f5ef02382b8c9ac405a63f794d 284 Pfam PF05368 NmrA-like family 2 214 4.3E-12 T 22-04-2016 IPR008030 NmrA-like domain SAMA_RS18450 63dbd3f5ef02382b8c9ac405a63f794d 284 Gene3D G3DSA:3.40.50.720 2 215 5.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS08180 1987ed668b349bc8890c4fdb788d2435 386 Pfam PF04209 homogentisate 1,2-dioxygenase 99 383 8.5E-18 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SAMA_RS08180 1987ed668b349bc8890c4fdb788d2435 386 Gene3D G3DSA:2.60.120.10 226 362 7.1E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS08180 1987ed668b349bc8890c4fdb788d2435 386 PANTHER PTHR11056 84 383 6.9E-87 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 SAMA_RS08180 1987ed668b349bc8890c4fdb788d2435 386 SUPERFAMILY SSF51182 7 383 1.19E-88 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS08180 1987ed668b349bc8890c4fdb788d2435 386 Gene3D G3DSA:2.60.120.10 93 172 1.2E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 SUPERFAMILY SSF142338 10 292 3.79E-79 T 22-04-2016 SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 284 3.2E-66 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 PANTHER PTHR30135:SF3 7 261 1.8E-95 T 22-04-2016 SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 262 5.5E-93 T 22-04-2016 IPR010119 Gluconeogenesis factor SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 Gene3D G3DSA:3.40.50.10680 82 296 1.5E-41 T 22-04-2016 SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 Hamap MF_00973 Gluconeogenesis factor. 8 297 29.516 T 22-04-2016 IPR010119 Gluconeogenesis factor SAMA_RS09405 0943a748f80395967816541f6c1e5011 302 PANTHER PTHR30135 7 261 1.8E-95 T 22-04-2016 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 101 135 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 44.504 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 SUPERFAMILY SSF53927 1 148 9.7E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 Gene3D G3DSA:3.40.140.10 185 288 3.2E-19 T 22-04-2016 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 156 276 1.3E-38 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 PANTHER PTHR11644:SF15 18 296 3.0E-134 T 22-04-2016 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 Gene3D G3DSA:3.40.140.10 32 172 1.8E-39 T 22-04-2016 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 PANTHER PTHR11644 18 296 3.0E-134 T 22-04-2016 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 PIRSF PIRSF006334 14 295 6.5E-93 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 SUPERFAMILY SSF53927 151 292 1.66E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS10310 e048419192995e5c1b0e44660aad21ac 296 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 59 138 2.4E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 Pfam PF03102 NeuB family 24 266 1.6E-92 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 PANTHER PTHR23416 3 289 4.7E-102 T 22-04-2016 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 Gene3D G3DSA:3.90.1210.10 276 332 1.8E-15 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 PANTHER PTHR23416:SF62 3 289 4.7E-102 T 22-04-2016 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 Pfam PF08666 SAF domain 282 332 2.8E-8 T 22-04-2016 IPR013974 SAF domain SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 SUPERFAMILY SSF51269 272 332 1.14E-15 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 SUPERFAMILY SSF51569 3 284 4.4E-85 T 22-04-2016 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 Gene3D G3DSA:3.20.20.70 3 265 3.0E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS12200 b68c6881a54687d1a1bcb35feb136cfa 332 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 4 332 2.2E-144 T 22-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.4E-155 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 PANTHER PTHR30307 2 340 1.4E-179 T 22-04-2016 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 PANTHER PTHR30307:SF0 2 340 1.4E-179 T 22-04-2016 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.439 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 Gene3D G3DSA:2.40.10.240 64 140 6.3E-17 T 22-04-2016 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 SUPERFAMILY SSF111337 1 340 4.32E-137 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 Pfam PF02547 Queuosine biosynthesis protein 4 340 2.6E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 Gene3D G3DSA:3.40.1780.10 1 62 1.6E-101 T 22-04-2016 SAMA_RS11455 58e665d0fd22bbf68718fb9ecf2edcc0 345 Gene3D G3DSA:3.40.1780.10 177 340 1.6E-101 T 22-04-2016 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 Pfam PF07650 KH domain 241 317 4.6E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 Hamap MF_00367 GTPase Era [era]. 36 329 35.503 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 PANTHER PTHR11649 9 332 4.6E-116 T 22-04-2016 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 109 127 2.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 41 61 2.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 Pfam PF01926 50S ribosome-binding GTPase 41 157 1.1E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 TIGRFAM TIGR00436 era: GTP-binding protein Era 39 312 6.3E-104 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 37 201 4.5E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 Gene3D G3DSA:3.30.300.20 226 326 6.6E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 SUPERFAMILY SSF52540 41 237 6.11E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 SUPERFAMILY SSF54814 214 329 1.05E-42 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 Gene3D G3DSA:3.40.50.300 41 225 6.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04605 c8fc031b0bd73634abc4af3c67f8b752 332 PANTHER PTHR11649:SF3 9 332 4.6E-116 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 Gene3D G3DSA:3.40.190.10 115 215 1.4E-32 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 Pfam PF13531 Bacterial extracellular solute-binding protein 26 252 4.3E-53 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 PIRSF PIRSF004846 1 256 1.5E-63 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 Gene3D G3DSA:3.40.190.10 24 114 1.1E-11 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 Gene3D G3DSA:3.40.190.10 216 257 1.1E-11 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 PANTHER PTHR30632 1 252 1.4E-48 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 PANTHER PTHR30632:SF0 1 252 1.4E-48 T 22-04-2016 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 251 1.1E-55 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SAMA_RS18345 8167fb321df455c86830f3cec492ba4b 262 SUPERFAMILY SSF53850 24 255 7.67E-59 T 22-04-2016 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 17 362 2.2E-118 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 Hamap MF_01841 Agmatine deiminase [aguA]. 8 363 56.858 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 8 362 9.9E-172 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 Gene3D G3DSA:3.75.10.10 6 363 7.1E-144 T 22-04-2016 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 PANTHER PTHR31377:SF0 1 364 2.5E-178 T 22-04-2016 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 PANTHER PTHR31377 1 364 2.5E-178 T 22-04-2016 SAMA_RS13155 e0d4fd8ed45886d55fc4788c90113180 365 SUPERFAMILY SSF55909 5 363 3.21E-138 T 22-04-2016 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 216 235 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 188 206 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 95 117 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 413 433 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 311 329 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PRINTS PR00175 Sodium/alanine symporter signature 354 376 2.3E-51 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PANTHER PTHR30330 1 450 1.4E-211 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 444 4.2E-150 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 Pfam PF01235 Sodium:alanine symporter family 60 452 5.6E-143 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS16500 486b6522f3f34d6ff2a0549b4494299a 459 PANTHER PTHR30330:SF3 1 450 1.4E-211 T 22-04-2016 SAMA_RS14310 212d4d99d946e0df3e792ff030f8057f 309 PANTHER PTHR30503 2 304 3.9E-104 T 22-04-2016 SAMA_RS14310 212d4d99d946e0df3e792ff030f8057f 309 PIRSF PIRSF016660 1 307 1.1E-125 T 22-04-2016 IPR008526 Inner membrane protein YedI SAMA_RS14310 212d4d99d946e0df3e792ff030f8057f 309 Pfam PF05661 Protein of unknown function (DUF808) 4 295 4.3E-116 T 22-04-2016 IPR008526 Inner membrane protein YedI SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 PANTHER PTHR11615:SF133 49 431 0.0 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 PANTHER PTHR11615:SF133 447 827 0.0 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 SUPERFAMILY SSF50692 668 825 4.97E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 SUPERFAMILY SSF53706 44 659 2.62E-170 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 502 519 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Pfam PF00384 Molybdopterin oxidoreductase 86 558 1.5E-78 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Pfam PF01568 Molydopterin dinucleotide binding domain 675 803 8.1E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 827 0.0 T 22-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 PANTHER PTHR11615 49 431 0.0 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 PANTHER PTHR11615 447 827 0.0 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Gene3D G3DSA:3.40.50.740 80 181 4.7E-48 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Gene3D G3DSA:3.40.50.740 392 503 4.7E-48 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Gene3D G3DSA:2.40.40.20 648 818 2.2E-54 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Gene3D G3DSA:3.90.55.10 504 608 2.9E-33 T 22-04-2016 SAMA_RS05155 70bc9ec50ca2c83b190c2532d0254a0b 829 Gene3D G3DSA:3.40.228.10 187 391 2.3E-50 T 22-04-2016 SAMA_RS16560 d6270c628a5018a80282f5f65622fb44 109 SUPERFAMILY SSF46626 5 102 1.34E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS16560 d6270c628a5018a80282f5f65622fb44 109 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 95 8.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS16560 d6270c628a5018a80282f5f65622fb44 109 Gene3D G3DSA:3.10.450.40 73 99 6.2E-4 T 22-04-2016 SAMA_RS16560 d6270c628a5018a80282f5f65622fb44 109 Gene3D G3DSA:1.10.760.10 29 72 1.1E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 SUPERFAMILY SSF56300 17 275 2.37E-52 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 Pfam PF00149 Calcineurin-like phosphoesterase 17 206 3.8E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 PANTHER PTHR12905:SF7 52 279 2.7E-63 T 22-04-2016 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 PANTHER PTHR12905:SF7 17 36 2.7E-63 T 22-04-2016 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 222 265 2.0E-19 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 Gene3D G3DSA:3.60.21.10 15 258 6.9E-30 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 16 265 36.744 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 PANTHER PTHR12905 17 36 2.7E-63 T 22-04-2016 SAMA_RS15900 832befbbfc0474b9dd2db16fc1a38304 279 PANTHER PTHR12905 52 279 2.7E-63 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615:SF140 406 599 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615:SF140 731 950 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615:SF140 10 382 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 21 42 8.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 SUPERFAMILY SSF50692 802 950 1.2E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 SMART SM00926 61 115 5.8E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:2.20.25.90 60 115 1.1E-16 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615 406 599 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615 731 950 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 PANTHER PTHR11615 10 382 0.0 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 64 112 9.2E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:3.40.228.10 226 296 2.9E-33 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:3.40.228.10 343 384 2.9E-33 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Pfam PF01568 Molydopterin dinucleotide binding domain 816 942 4.5E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:2.40.40.20 641 674 4.7E-54 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:2.40.40.20 811 950 4.7E-54 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:2.40.40.20 768 779 4.7E-54 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Pfam PF00384 Molybdopterin oxidoreductase 118 569 8.7E-62 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 SUPERFAMILY SSF53706 60 645 6.94E-200 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:3.40.50.740 118 225 3.3E-67 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 Gene3D G3DSA:3.40.50.740 447 583 3.3E-67 T 22-04-2016 SAMA_RS18750 52a2615477d097ccc6f5cfdd4f690efe 950 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 Gene3D G3DSA:2.160.10.10 102 282 3.9E-39 T 22-04-2016 SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 9.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 195 228 1.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 232 266 4.1E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 SUPERFAMILY SSF51161 101 285 3.11E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS11795 73a94b0edea2438cc42acba09d836f43 286 PANTHER PTHR23416 106 285 8.4E-29 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 651 753 1.8E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 648 667 3.3E-10 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 3.3E-10 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 726 3.3E-10 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 Pfam PF13654 AAA domain 27 541 6.2E-185 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 SUPERFAMILY SSF52540 317 537 9.97E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 SUPERFAMILY SSF52540 32 106 9.97E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 PANTHER PTHR10046:SF46 118 762 1.1E-132 T 22-04-2016 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 Gene3D G3DSA:3.40.50.300 32 89 2.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 Gene3D G3DSA:3.40.50.300 302 402 2.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 PANTHER PTHR10046 118 762 1.1E-132 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 SUPERFAMILY SSF54211 567 759 2.35E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS12575 df22f09b3ea33a79056003d638c30011 791 Gene3D G3DSA:3.30.230.10 563 757 1.0E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS17580 7bd911f773bdcc76aa364234f45e8534 275 SUPERFAMILY SSF69593 83 269 3.4E-25 T 22-04-2016 SAMA_RS17580 7bd911f773bdcc76aa364234f45e8534 275 SMART SM00563 103 212 5.1E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17580 7bd911f773bdcc76aa364234f45e8534 275 Pfam PF01553 Acyltransferase 92 208 2.0E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17580 7bd911f773bdcc76aa364234f45e8534 275 PANTHER PTHR10434 21 272 6.6E-27 T 22-04-2016 SAMA_RS17580 7bd911f773bdcc76aa364234f45e8534 275 Gene3D G3DSA:3.40.1130.10 89 250 7.9E-8 T 22-04-2016 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 SMART SM00387 417 529 2.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 Gene3D G3DSA:3.30.565.10 379 530 2.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 144 9.0E-34 T 22-04-2016 IPR033414 Periplasmic sensor domain UniPathway: UPA00073 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 527 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PANTHER PTHR24423 6 15 5.6E-30 T 22-04-2016 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PANTHER PTHR24423 336 539 5.6E-30 T 22-04-2016 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PANTHER PTHR24423 33 71 5.6E-30 T 22-04-2016 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PANTHER PTHR24423 265 319 5.6E-30 T 22-04-2016 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 485 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 1.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 SUPERFAMILY SSF55874 367 531 6.94E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02915 f93b1afbd510431012a47b2fe09974cb 547 SUPERFAMILY SSF47384 285 370 3.14E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 PANTHER PTHR10060 3 264 5.0E-136 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 Gene3D G3DSA:3.20.20.140 2 263 1.5E-80 T 22-04-2016 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 SUPERFAMILY SSF51556 4 263 2.56E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 PANTHER PTHR10060:SF13 3 264 5.0E-136 T 22-04-2016 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 PIRSF PIRSF005902 1 265 4.1E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS16715 3c460e9e119c8b9e15d9cd79b0dcdc80 267 Pfam PF01026 TatD related DNase 6 260 5.9E-62 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 SUPERFAMILY SSF47384 121 186 1.88E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 SMART SM00388 126 191 8.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 Gene3D G3DSA:1.10.287.130 123 183 1.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 344 5.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 Gene3D G3DSA:3.30.450.20 4 100 2.7E-15 T 22-04-2016 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 SUPERFAMILY SSF55785 4 99 4.76E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 SUPERFAMILY SSF55874 194 344 9.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 SMART SM00387 230 346 4.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 185 2.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 Gene3D G3DSA:3.30.565.10 193 345 3.3E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 325 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 292 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PANTHER PTHR24423 4 262 7.7E-145 T 22-04-2016 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PANTHER PTHR24423 278 347 7.7E-145 T 22-04-2016 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PANTHER PTHR24423:SF488 4 262 7.7E-145 T 22-04-2016 SAMA_RS17825 ecaed3b7b99835580064d9a3293aafd1 348 PANTHER PTHR24423:SF488 278 347 7.7E-145 T 22-04-2016 SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 PANTHER PTHR13932 6 379 1.1E-206 T 22-04-2016 SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 PANTHER PTHR13932:SF7 6 379 1.1E-206 T 22-04-2016 SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 370 1.2E-129 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 Pfam PF04055 Radical SAM superfamily 12 179 8.2E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 SUPERFAMILY SSF102114 6 379 3.79E-110 T 22-04-2016 SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 Gene3D G3DSA:3.80.30.20 8 240 4.9E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 Pfam PF06969 HemN C-terminal domain 306 367 4.2E-9 T 22-04-2016 IPR010723 HemN, C-terminal SAMA_RS12960 a40f7cc4e5038b9e5c92c35566950718 379 SMART SM00729 7 224 3.0E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 84 108 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 295 311 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 264 280 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 405 421 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 239 257 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 144 173 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PRINTS PR00072 Malic enzyme signature 180 202 1.2E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 Gene3D G3DSA:3.40.50.720 266 559 2.6E-109 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 SUPERFAMILY SSF53223 5 267 7.91E-109 T 22-04-2016 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 SUPERFAMILY SSF51735 268 559 9.77E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 SMART SM01274 78 258 3.3E-104 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 5.7E-104 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 3.8E-77 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PANTHER PTHR23406:SF25 1 562 0.0 T 22-04-2016 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PANTHER PTHR23406 1 562 0.0 T 22-04-2016 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 PIRSF PIRSF000106 2 560 6.0E-226 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 Gene3D G3DSA:3.40.50.10380 14 265 3.8E-115 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 SMART SM00919 268 528 1.2E-132 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SAMA_RS13735 63746dd1a5e62be0c8e5ba311f3b2bd7 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 70.892 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SUPERFAMILY SSF51412 217 477 1.44E-126 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SUPERFAMILY SSF51412 2 90 1.44E-126 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 Pfam PF00571 CBS domain 96 140 5.0E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 Pfam PF00571 CBS domain 149 201 4.3E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.7E-161 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SMART SM01240 7 473 0.0 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 Gene3D G3DSA:3.20.20.70 4 485 1.1E-195 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 PIRSF PIRSF000130 1 487 1.9E-199 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 PANTHER PTHR11911 300 485 1.1E-248 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 PANTHER PTHR11911 1 282 1.1E-248 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 453 5.6E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SUPERFAMILY SSF54631 95 203 1.26E-27 T 22-04-2016 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 PANTHER PTHR11911:SF6 300 485 1.1E-248 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 PANTHER PTHR11911:SF6 1 282 1.1E-248 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SMART SM00116 96 144 6.5E-11 T 22-04-2016 IPR000644 CBS domain SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 SMART SM00116 158 206 3.6E-8 T 22-04-2016 IPR000644 CBS domain SAMA_RS12340 4a795fe3a7f213ee9246182c9d655b00 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.473 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 SUPERFAMILY SSF102114 2 432 1.07E-141 T 22-04-2016 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 SMART SM00729 41 261 1.1E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 PANTHER PTHR13932 1 440 4.2E-254 T 22-04-2016 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 Pfam PF04055 Radical SAM superfamily 46 217 6.8E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 446 2.3E-199 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 Gene3D G3DSA:3.80.30.20 41 271 3.7E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 PANTHER PTHR13932:SF6 1 440 4.2E-254 T 22-04-2016 SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 Pfam PF06969 HemN C-terminal domain 352 420 1.2E-10 T 22-04-2016 IPR010723 HemN, C-terminal SAMA_RS00435 892478d4178b519f5a21f98004604ee5 446 PIRSF PIRSF000167 1 443 3.9E-170 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SAMA_RS12740 d08e2f764a4f4ebe2ccca2d4dcb42b7b 547 PANTHER PTHR30003:SF4 5 179 7.2E-246 T 22-04-2016 SAMA_RS12740 d08e2f764a4f4ebe2ccca2d4dcb42b7b 547 PANTHER PTHR30003:SF4 196 544 7.2E-246 T 22-04-2016 SAMA_RS12740 d08e2f764a4f4ebe2ccca2d4dcb42b7b 547 PANTHER PTHR30003 5 179 7.2E-246 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SAMA_RS12740 d08e2f764a4f4ebe2ccca2d4dcb42b7b 547 PANTHER PTHR30003 196 544 7.2E-246 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SAMA_RS12740 d08e2f764a4f4ebe2ccca2d4dcb42b7b 547 Pfam PF02652 L-lactate permease 6 543 8.9E-104 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 ProSitePatterns PS00761 Signal peptidases I signature 3. 243 256 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 Gene3D G3DSA:2.170.230.10 153 237 8.8E-25 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PANTHER PTHR12383:SF27 220 282 1.5E-100 T 22-04-2016 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PANTHER PTHR12383:SF27 3 190 1.5E-100 T 22-04-2016 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PANTHER PTHR12383 220 282 1.5E-100 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PANTHER PTHR12383 3 190 1.5E-100 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 SUPERFAMILY SSF51306 77 303 7.15E-74 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 Pfam PF00717 Peptidase S24-like 85 165 1.5E-23 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 278 4.6E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 Pfam PF10502 Signal peptidase, peptidase S26 234 275 4.9E-7 T 22-04-2016 IPR019533 Peptidase S26 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 238 257 1.3E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 1.3E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 1.3E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 Gene3D G3DSA:2.10.109.10 238 280 2.1E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SAMA_RS04595 702c66877c0e6ddad25c9b761773e1bf 305 Gene3D G3DSA:2.10.109.10 75 152 2.1E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 SUPERFAMILY SSF56935 445 595 3.66E-99 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 SUPERFAMILY SSF56935 625 674 3.66E-99 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 SUPERFAMILY SSF56935 283 412 3.66E-99 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 SUPERFAMILY SSF56935 34 218 3.66E-99 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 SUPERFAMILY SSF56935 716 902 3.66E-99 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Gene3D G3DSA:2.170.130.10 25 156 1.5E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Gene3D G3DSA:2.40.170.20 620 902 4.2E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Gene3D G3DSA:2.40.170.20 157 231 4.2E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Gene3D G3DSA:2.40.170.20 445 583 4.2E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Gene3D G3DSA:2.40.170.20 282 408 4.2E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Pfam PF00593 TonB dependent receptor 553 900 4.5E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 PANTHER PTHR30069 1 770 1.2E-119 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 PANTHER PTHR30069:SF7 1 770 1.2E-119 T 22-04-2016 SAMA_RS06560 09167f09b9eedc84629e643d04f0c696 902 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 153 1.3E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 PANTHER PTHR18895:SF62 407 684 4.4E-115 T 22-04-2016 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 SUPERFAMILY SSF53335 401 707 5.82E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 371 1.1E-50 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 482 664 5.0E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Gene3D G3DSA:3.40.50.150 438 707 3.4E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Pfam PF02926 THUMP domain 43 153 9.0E-7 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 SUPERFAMILY SSF53335 259 376 4.89E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 SUPERFAMILY SSF53335 141 218 4.89E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 PANTHER PTHR18895 407 684 4.4E-115 T 22-04-2016 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 PIRSF PIRSF037618 1 708 2.1E-300 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 SMART SM00981 56 154 2.4E-16 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 708 32.121 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Gene3D G3DSA:3.40.50.150 154 215 1.0E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08345 d73ad675d103ed5eaba0546b6a10231c 708 Gene3D G3DSA:3.40.50.150 256 370 1.0E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Gene3D G3DSA:3.40.50.300 324 547 2.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Pfam PF16326 ABC transporter C-terminal domain 567 635 3.5E-19 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Pfam PF12848 ABC transporter 228 304 2.1E-9 T 22-04-2016 IPR032781 ABC-transporter extension domain SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Pfam PF00005 ABC transporter 19 188 6.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Pfam PF00005 ABC transporter 339 472 2.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 PANTHER PTHR19211:SF45 1 577 8.9E-225 T 22-04-2016 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 PANTHER PTHR19211 1 577 8.9E-225 T 22-04-2016 SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 SUPERFAMILY SSF52540 316 527 4.48E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 SMART SM00382 347 518 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 SMART SM00382 28 233 6.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 SUPERFAMILY SSF52540 6 236 1.24E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Gene3D G3DSA:3.40.50.300 5 102 7.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08355 78c2887ca413ba0a52f26764c0cbef8c 638 Gene3D G3DSA:3.40.50.300 139 285 7.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08095 c424f0b03e4476e22b96990acec6c442 493 PANTHER PTHR11614:SF89 54 340 2.5E-61 T 22-04-2016 SAMA_RS08095 c424f0b03e4476e22b96990acec6c442 493 Gene3D G3DSA:3.40.50.1820 113 340 7.3E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS08095 c424f0b03e4476e22b96990acec6c442 493 PANTHER PTHR11614 54 340 2.5E-61 T 22-04-2016 SAMA_RS08095 c424f0b03e4476e22b96990acec6c442 493 Pfam PF12697 Alpha/beta hydrolase family 124 273 5.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08095 c424f0b03e4476e22b96990acec6c442 493 SUPERFAMILY SSF53474 113 255 3.21E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 SMART SM00344 8 114 2.4E-43 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 PANTHER PTHR30154:SF2 8 153 1.8E-61 T 22-04-2016 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 Gene3D G3DSA:1.10.10.10 5 58 1.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 8.4E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 8.4E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 8.4E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 1.3E-16 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 SUPERFAMILY SSF46785 8 67 2.86E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 1.5E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 SUPERFAMILY SSF54909 68 151 1.31E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 Gene3D G3DSA:3.30.70.920 60 141 2.7E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS03215 0443e5b3a538431fe29a726ec74c6f37 153 PANTHER PTHR30154 8 153 1.8E-61 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Pfam PF13840 ACT domain 393 454 5.7E-9 T 22-04-2016 IPR027795 GATS-like ACT domain SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 SUPERFAMILY SSF55021 304 381 4.0E-18 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Gene3D G3DSA:3.40.50.720 464 635 1.1E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 SUPERFAMILY SSF53633 1 297 1.28E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Gene3D G3DSA:3.40.1160.10 1 49 1.2E-62 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Gene3D G3DSA:3.40.1160.10 111 299 1.2E-62 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Pfam PF01842 ACT domain 324 381 1.4E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 SUPERFAMILY SSF51735 464 636 1.31E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Gene3D G3DSA:3.30.360.10 636 791 3.9E-52 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Pfam PF00696 Amino acid kinase family 2 284 4.5E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 PANTHER PTHR21499:SF1 1 471 2.6E-162 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 PANTHER PTHR21499 1 471 2.6E-162 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 SUPERFAMILY SSF55021 384 476 4.16E-22 T 22-04-2016 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 5.6E-26 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.4E-122 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 Pfam PF00742 Homoserine dehydrogenase 614 810 1.6E-44 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS04725 9acb0b50a950d3da5fac7e00806d9f80 821 SUPERFAMILY SSF55347 614 797 2.55E-48 T 22-04-2016 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 PANTHER PTHR30173:SF31 27 215 1.6E-57 T 22-04-2016 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 Pfam PF08281 Sigma-70, region 4 156 206 7.6E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 209 4.7E-27 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 PANTHER PTHR30173 27 215 1.6E-57 T 22-04-2016 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 SUPERFAMILY SSF88946 33 139 1.96E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 Gene3D G3DSA:1.10.1740.10 41 139 1.4E-21 T 22-04-2016 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 Pfam PF04542 Sigma-70 region 2 56 122 1.3E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 Gene3D G3DSA:1.10.10.10 149 212 9.0E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10620 b6c073baec0404a29417df48c83011ee 215 SUPERFAMILY SSF88659 151 213 1.81E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Gene3D G3DSA:3.40.47.10 302 436 1.1E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Gene3D G3DSA:3.40.47.10 175 220 1.1E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 PIRSF PIRSF000429 10 436 5.2E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 PANTHER PTHR18919:SF5 10 436 7.4E-191 T 22-04-2016 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 SUPERFAMILY SSF53901 15 294 7.54E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 3.9E-265 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 PANTHER PTHR18919 10 436 7.4E-191 T 22-04-2016 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 SUPERFAMILY SSF53901 297 435 3.89E-33 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 5.7E-57 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.3E-37 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.472 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Gene3D G3DSA:3.40.47.10 221 300 1.6E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 Gene3D G3DSA:3.40.47.10 15 134 1.6E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS11325 5d0acaf3bc29747ca2bef881f557743d 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 7.1E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 SMART SM00267 250 406 1.7E-26 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 SMART SM00065 100 258 2.2E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 Gene3D G3DSA:3.30.450.40 73 261 5.0E-23 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 400 2.3E-25 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 SUPERFAMILY SSF55073 266 400 5.65E-27 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 Gene3D G3DSA:3.30.70.270 263 401 9.2E-28 T 22-04-2016 SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 SUPERFAMILY SSF55781 85 252 1.35E-15 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 Pfam PF13185 GAF domain 100 249 1.2E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS05570 6dd4b3659a5d0b83c5e189523755b7cf 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 400 3.6E-24 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 SUPERFAMILY SSF75615 114 201 3.66E-23 T 22-04-2016 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Pfam PF10414 Sirohaem synthase dimerisation region 150 196 6.4E-13 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 184 9.7E-57 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Gene3D G3DSA:3.30.160.110 113 148 7.6E-19 T 22-04-2016 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.4E-7 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Pfam PF13241 Putative NAD(P)-binding 6 115 1.5E-27 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Gene3D G3DSA:3.40.50.720 1 112 2.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 PANTHER PTHR35330 1 227 3.2E-56 T 22-04-2016 SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 SUPERFAMILY SSF51735 1 112 7.16E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11420 12c94d3726adb9f972faddb2297e029c 303 Gene3D G3DSA:1.10.8.210 150 184 1.5E-9 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 Gene3D G3DSA:3.30.70.990 9 95 1.2E-28 T 22-04-2016 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 SUPERFAMILY SSF89963 89 161 7.59E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 29.303 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 3.0E-62 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 PANTHER PTHR30476 1 161 1.3E-86 T 22-04-2016 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 Gene3D G3DSA:3.30.70.860 96 161 2.5E-34 T 22-04-2016 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 SUPERFAMILY SSF89963 2 87 7.06E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SAMA_RS13335 299907d677ecc949e452a6f64e4eab45 161 PANTHER PTHR30476:SF0 1 161 1.3E-86 T 22-04-2016 SAMA_RS12225 a2b561796d605ba5e3f78e0a994ce0d5 232 Gene3D G3DSA:3.90.550.10 5 226 1.9E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12225 a2b561796d605ba5e3f78e0a994ce0d5 232 Pfam PF02348 Cytidylyltransferase 9 204 7.7E-27 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SAMA_RS12225 a2b561796d605ba5e3f78e0a994ce0d5 232 PANTHER PTHR21485 1 224 1.4E-53 T 22-04-2016 SAMA_RS12225 a2b561796d605ba5e3f78e0a994ce0d5 232 SUPERFAMILY SSF53448 6 225 6.61E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 PANTHER PTHR10245:SF9 3 87 2.1E-12 T 22-04-2016 SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 Pfam PF01381 Helix-turn-helix 15 70 3.9E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 SUPERFAMILY SSF47413 9 76 1.18E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 Gene3D G3DSA:1.10.260.40 11 107 1.7E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 PANTHER PTHR10245 3 87 2.1E-12 T 22-04-2016 SAMA_RS14220 bd3cd6b92101ee1389f1a3a4daa0850b 119 SMART SM00530 14 70 7.9E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 45 241 1.2E-85 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 218 230 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PANTHER PTHR30587:SF0 31 243 2.9E-120 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 170 185 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 Pfam PF00813 FliP family 45 237 1.1E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 212 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 190 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 43 62 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 82 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 101 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 215 240 7.0E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 41 50 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 231 241 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 141 153 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 163 175 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 127 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 101 113 9.4E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SAMA_RS11975 2c1832aff7b3fc16f9cc2e9afe887360 243 PANTHER PTHR30587 31 243 2.9E-120 T 22-04-2016 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 PANTHER PTHR24421 764 1033 3.8E-44 T 22-04-2016 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 SMART SM00387 937 1035 5.9E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 SUPERFAMILY SSF63829 77 270 3.6E-17 T 22-04-2016 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Pfam PF07494 Two component regulator propeller 21 42 0.0025 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Pfam PF07494 Two component regulator propeller 160 182 8.0E-5 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 SUPERFAMILY SSF63829 439 608 2.09E-9 T 22-04-2016 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Gene3D G3DSA:2.120.10.30 61 189 3.7E-14 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Gene3D G3DSA:2.120.10.30 443 547 6.8E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Gene3D G3DSA:2.120.10.30 213 324 3.0E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Gene3D G3DSA:2.120.10.30 369 378 3.0E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 SUPERFAMILY SSF63829 256 407 3.92E-6 T 22-04-2016 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Gene3D G3DSA:3.30.565.10 941 1034 6.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Pfam PF07730 Histidine kinase 836 899 2.6E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 940 1034 2.5E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09800 87d20ae9dcd54f52463c3a84b57a8030 1035 SUPERFAMILY SSF55874 901 1032 3.01E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Gene3D G3DSA:3.20.20.450 511 758 4.5E-90 T 22-04-2016 IPR001633 EAL domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Pfam PF00563 EAL domain 514 747 1.4E-71 T 22-04-2016 IPR001633 EAL domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 PANTHER PTHR33121:SF13 460 760 1.0E-72 T 22-04-2016 SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 492 2.2E-14 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Pfam PF14827 Double sensory domain of two-component sensor kinase 39 214 1.1E-16 T 22-04-2016 IPR029150 Double Cache domain 3 SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Pfam PF00672 HAMP domain 270 336 3.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 SUPERFAMILY SSF141868 513 758 6.67E-85 T 22-04-2016 IPR001633 EAL domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 SMART SM00304 289 340 0.0035 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 SUPERFAMILY SSF55073 351 487 2.04E-24 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 SMART SM00052 507 752 6.1E-99 T 22-04-2016 IPR001633 EAL domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Gene3D G3DSA:3.30.70.270 347 491 1.6E-25 T 22-04-2016 SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 490 1.0E-23 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 SMART SM00267 335 497 1.7E-18 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16245 7f7c9584fd78272678ebdf1e31893a22 768 PANTHER PTHR33121 460 760 1.0E-72 T 22-04-2016 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 PANTHER PTHR10986:SF12 2 117 3.1E-67 T 22-04-2016 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 1.0E-14 T 22-04-2016 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.778 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 PANTHER PTHR10986 2 117 3.1E-67 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.9E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 SUPERFAMILY SSF74731 2 117 2.49E-51 T 22-04-2016 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 Gene3D G3DSA:1.10.1900.20 55 117 8.2E-31 T 22-04-2016 SAMA_RS09225 6e2b0e5e5a991fc8526d8f6bc855bfba 119 Pfam PF00453 Ribosomal protein L20 3 109 2.3E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PANTHER PTHR24322:SF513 157 188 2.1E-36 T 22-04-2016 SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PANTHER PTHR24322:SF513 10 141 2.1E-36 T 22-04-2016 SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 SUPERFAMILY SSF51735 1 236 4.65E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 Pfam PF00106 short chain dehydrogenase 6 193 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PANTHER PTHR24322 157 188 2.1E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 PANTHER PTHR24322 10 141 2.1E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07130 4867fe54215913d3f3d7cb00bef79096 298 Gene3D G3DSA:3.40.50.720 5 236 9.9E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 Pfam PF01476 LysM domain 48 91 2.4E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 SMART SM00257 47 91 7.1E-13 T 22-04-2016 IPR018392 LysM domain SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 Gene3D G3DSA:2.70.70.10 160 295 8.8E-39 T 22-04-2016 SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 PANTHER PTHR21666:SF222 176 294 2.5E-46 T 22-04-2016 SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 PANTHER PTHR21666 176 294 2.5E-46 T 22-04-2016 SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 Gene3D G3DSA:3.10.350.10 46 90 1.1E-15 T 22-04-2016 IPR018392 LysM domain SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 Pfam PF01551 Peptidase family M23 196 289 8.6E-29 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS05435 3df160dfe8e8f039dac65c28be885ee3 296 SUPERFAMILY SSF51261 48 293 8.37E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 8.4E-29 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PRINTS PR00481 Cytosol aminopeptidase signature 275 296 8.4E-29 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PRINTS PR00481 Cytosol aminopeptidase signature 253 270 8.4E-29 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PRINTS PR00481 Cytosol aminopeptidase signature 335 355 8.4E-29 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PRINTS PR00481 Cytosol aminopeptidase signature 367 382 8.4E-29 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 172 489 4.6E-59 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PANTHER PTHR11963 47 503 2.7E-173 T 22-04-2016 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 339 346 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 Gene3D G3DSA:3.40.630.10 162 508 5.6E-83 T 22-04-2016 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 PANTHER PTHR11963:SF9 47 503 2.7E-173 T 22-04-2016 SAMA_RS13140 174bf4206fe5ca3b9d6563a95131e200 509 SUPERFAMILY SSF53187 167 508 9.73E-70 T 22-04-2016 SAMA_RS07005 0134d20d2e959fac1b1b5d81d796a868 171 SUPERFAMILY SSF55729 1 162 2.96E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07005 0134d20d2e959fac1b1b5d81d796a868 171 PANTHER PTHR23091 1 163 1.0E-30 T 22-04-2016 SAMA_RS07005 0134d20d2e959fac1b1b5d81d796a868 171 PANTHER PTHR23091:SF187 1 163 1.0E-30 T 22-04-2016 SAMA_RS07005 0134d20d2e959fac1b1b5d81d796a868 171 Gene3D G3DSA:3.40.630.30 1 163 2.0E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07005 0134d20d2e959fac1b1b5d81d796a868 171 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 6.6E-22 T 22-04-2016 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 PANTHER PTHR10815 22 172 1.1E-49 T 22-04-2016 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 Gene3D G3DSA:1.10.10.10 91 173 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 143 149 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 94 173 4.4E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 SUPERFAMILY SSF53155 20 97 8.24E-17 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 SUPERFAMILY SSF46767 92 173 1.7E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 PANTHER PTHR10815:SF5 22 172 1.1E-49 T 22-04-2016 SAMA_RS11505 57f0668f212faa2e9652441e420ff60a 179 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 93 172 2.0E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Gene3D G3DSA:1.10.8.60 343 428 3.1E-35 T 22-04-2016 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Gene3D G3DSA:3.40.50.300 160 342 4.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PANTHER PTHR11638:SF18 1 855 0.0 T 22-04-2016 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Gene3D G3DSA:3.40.50.300 550 777 9.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SUPERFAMILY SSF52540 546 855 3.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Gene3D G3DSA:1.10.1780.10 1 148 3.6E-43 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SMART SM00382 597 735 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SMART SM00382 198 344 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 2.9E-27 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PANTHER PTHR11638 1 855 0.0 T 22-04-2016 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 316 9.4E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SUPERFAMILY SSF81923 4 156 9.81E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SMART SM01086 766 855 1.1E-40 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Gene3D G3DSA:1.10.8.60 778 856 2.7E-31 T 22-04-2016 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 SUPERFAMILY SSF52540 159 545 7.63E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.3E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 2.4E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.2E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 3.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 3.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 3.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS13625 7f090679b1105c87ba008f41cd56a31b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 3.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS05130 3456f41a43903865ea8440dff6d682e8 123 PIRSF PIRSF028141 1 119 1.8E-42 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type SAMA_RS05130 3456f41a43903865ea8440dff6d682e8 123 Pfam PF07238 PilZ domain 3 99 1.5E-13 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SAMA_RS05130 3456f41a43903865ea8440dff6d682e8 123 Gene3D G3DSA:2.40.10.220 1 121 6.2E-46 T 22-04-2016 SAMA_RS05130 3456f41a43903865ea8440dff6d682e8 123 SUPERFAMILY SSF141371 1 120 4.9E-36 T 22-04-2016 SAMA_RS07580 40a9b2ad7e5ab5e552065938dcbf54eb 198 PANTHER PTHR33452:SF5 1 119 3.0E-83 T 22-04-2016 SAMA_RS07580 40a9b2ad7e5ab5e552065938dcbf54eb 198 PANTHER PTHR33452:SF5 158 193 3.0E-83 T 22-04-2016 SAMA_RS07580 40a9b2ad7e5ab5e552065938dcbf54eb 198 PANTHER PTHR33452 1 119 3.0E-83 T 22-04-2016 SAMA_RS07580 40a9b2ad7e5ab5e552065938dcbf54eb 198 PANTHER PTHR33452 158 193 3.0E-83 T 22-04-2016 SAMA_RS07580 40a9b2ad7e5ab5e552065938dcbf54eb 198 Pfam PF07681 DoxX 21 106 1.5E-22 T 22-04-2016 IPR032808 DoxX family SAMA_RS00620 5aa69307cdeeb819e41446c74ee6db5e 235 SUPERFAMILY SSF161098 18 223 7.46E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS00620 5aa69307cdeeb819e41446c74ee6db5e 235 PANTHER PTHR30183:SF4 6 235 5.4E-107 T 22-04-2016 SAMA_RS00620 5aa69307cdeeb819e41446c74ee6db5e 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 222 1.1E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS00620 5aa69307cdeeb819e41446c74ee6db5e 235 PANTHER PTHR30183 6 235 5.4E-107 T 22-04-2016 SAMA_RS00620 5aa69307cdeeb819e41446c74ee6db5e 235 Gene3D G3DSA:1.10.3720.10 17 231 1.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 166 194 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 SUPERFAMILY SSF51161 58 211 1.67E-40 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 PANTHER PTHR23416:SF61 16 113 2.2E-82 T 22-04-2016 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 PANTHER PTHR23416 135 211 2.2E-82 T 22-04-2016 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 192 8.4E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 82 114 3.7E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 119 137 0.21 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 PANTHER PTHR23416 16 113 2.2E-82 T 22-04-2016 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 Gene3D G3DSA:2.160.10.10 46 214 2.6E-45 T 22-04-2016 SAMA_RS06090 2f9d415783fe21733496edf1b5ebde23 215 PANTHER PTHR23416:SF61 135 211 2.2E-82 T 22-04-2016 SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 SUPERFAMILY SSF54637 168 276 3.67E-20 T 22-04-2016 IPR029069 HotDog domain SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 PANTHER PTHR13078:SF54 1 267 1.9E-81 T 22-04-2016 SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 Pfam PF01575 MaoC like domain 176 261 2.1E-9 T 22-04-2016 IPR002539 MaoC-like domain SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 Gene3D G3DSA:3.10.129.10 168 276 1.6E-20 T 22-04-2016 IPR029069 HotDog domain SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 PANTHER PTHR13078 1 267 1.9E-81 T 22-04-2016 SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 Gene3D G3DSA:3.10.129.10 56 146 4.8E-4 T 22-04-2016 IPR029069 HotDog domain SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 Pfam PF13452 N-terminal half of MaoC dehydratase 51 126 1.5E-4 T 22-04-2016 SAMA_RS16410 4b87f56a3b3b92e4b681f45324a59fea 278 SUPERFAMILY SSF54637 49 146 6.84E-9 T 22-04-2016 IPR029069 HotDog domain SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 PANTHER PTHR22881 7 153 5.5E-63 T 22-04-2016 SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 Gene3D G3DSA:3.40.390.30 19 152 3.2E-49 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 SUPERFAMILY SSF55486 8 150 9.52E-49 T 22-04-2016 SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 1.8E-36 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 6 148 24.039 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SAMA_RS13465 b67ca0b32437dac809645cec18432433 153 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 1.4E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 SUPERFAMILY SSF52540 23 254 1.92E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 SMART SM00382 54 187 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Gene3D G3DSA:1.10.8.60 186 258 2.0E-33 T 22-04-2016 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 PANTHER PTHR13779:SF25 1 334 1.1E-186 T 22-04-2016 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.1E-145 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.8E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-38 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 PANTHER PTHR13779 1 334 1.1E-186 T 22-04-2016 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Gene3D G3DSA:1.10.10.10 260 330 5.0E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.3E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Gene3D G3DSA:3.40.50.300 23 177 1.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 SUPERFAMILY SSF46785 260 331 1.15E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09630 d0fdd1fff30c2a33fcc7acb719c8eeb9 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.959 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 Gene3D G3DSA:1.20.5.110 180 221 1.5E-16 T 22-04-2016 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 Gene3D G3DSA:1.10.287.70 132 178 8.0E-15 T 22-04-2016 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 PRINTS PR00169 Potassium channel signature 159 181 2.2E-7 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 PRINTS PR00169 Potassium channel signature 51 74 2.2E-7 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 PRINTS PR00169 Potassium channel signature 188 214 2.2E-7 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 PANTHER PTHR11537:SF14 18 205 5.4E-29 T 22-04-2016 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 PANTHER PTHR11537 18 205 5.4E-29 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 Gene3D G3DSA:1.20.120.350 14 131 7.5E-29 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 Pfam PF00520 Ion transport protein 18 214 4.4E-17 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SAMA_RS13995 6ca81bafad810a51b5e12777cfc52564 280 SUPERFAMILY SSF81324 19 215 4.5E-45 T 22-04-2016 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 Pfam PF02253 Phospholipase A1 27 290 1.4E-107 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 120 139 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 241 258 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 207 225 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 263 283 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 97 113 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PRINTS PR01486 Bacterial phospholipase A1 protein signature 75 92 6.4E-36 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 SUPERFAMILY SSF56931 28 293 1.96E-100 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 PANTHER PTHR40457 16 294 1.3E-89 T 22-04-2016 SAMA_RS15105 f15dab66b78eb64662271dbd5b6e9e02 294 Gene3D G3DSA:2.40.230.10 26 293 4.3E-103 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 Gene3D G3DSA:3.40.50.300 661 758 4.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 Gene3D G3DSA:3.40.50.300 367 455 4.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 SUPERFAMILY SSF52540 361 806 9.45E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 803 3.1E-279 T 22-04-2016 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 Gene3D G3DSA:1.10.10.160 85 187 2.4E-31 T 22-04-2016 IPR013986 DExx box DNA helicase domain SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 SUPERFAMILY SSF52980 813 1113 3.75E-67 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1118 12.845 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 SUPERFAMILY SSF52540 1 344 1.58E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1078 1.0E-299 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 PANTHER PTHR30591 1 1126 3.3E-250 T 22-04-2016 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 PANTHER PTHR30591:SF1 1 1126 3.3E-250 T 22-04-2016 SAMA_RS09945 570930eeb7f6d41a0ec616efccb08045 1142 PIRSF PIRSF000980 1 1123 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.832 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 Gene3D G3DSA:3.30.230.10 3 115 1.1E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 104 9.0E-34 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 PANTHER PTHR33992 2 116 6.8E-40 T 22-04-2016 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 Pfam PF00825 Ribonuclease P 6 112 3.1E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 114 2.7E-30 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 SUPERFAMILY SSF54211 4 116 1.11E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS00050 d9bb714b443517570c86d521023978a3 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 SUPERFAMILY SSF52317 283 356 1.72E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 SUPERFAMILY SSF52317 187 232 1.72E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 SUPERFAMILY SSF52317 387 451 1.72E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 PIRSF PIRSF032067 1 559 2.1E-134 T 22-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 PANTHER PTHR36175 280 455 4.7E-18 T 22-04-2016 SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 Gene3D G3DSA:3.40.50.880 283 355 1.5E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 Gene3D G3DSA:3.40.50.880 388 458 1.5E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12515 bbea8a15a6e8ac2e9245ce31040d9573 559 Gene3D G3DSA:3.40.50.880 190 237 1.5E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 121 216 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 4 29 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 239 303 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Pfam PF02225 PA domain 505 580 2.5E-11 T 22-04-2016 IPR003137 PA domain SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Gene3D G3DSA:3.40.50.200 144 215 1.2E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Gene3D G3DSA:3.40.50.200 607 752 1.2E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Gene3D G3DSA:3.40.50.200 269 436 1.2E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 334 486 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 SUPERFAMILY SSF52025 494 599 1.03E-7 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Gene3D G3DSA:3.50.30.30 494 589 2.8E-9 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 121 216 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 Pfam PF00082 Subtilase family 194 710 2.6E-42 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 4 29 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 SUPERFAMILY SSF52743 258 303 1.28E-64 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 SUPERFAMILY SSF52743 610 753 1.28E-64 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 SUPERFAMILY SSF52743 168 214 1.28E-64 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 SUPERFAMILY SSF52743 332 476 1.28E-64 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 512 863 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 48 91 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 666 676 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 239 303 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795:SF419 48 91 1.4E-122 T 22-04-2016 SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 213 3.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 665 681 3.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PRINTS PR00723 Subtilisin serine protease family (S8) signature 287 300 3.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 334 486 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS02960 816f114d007c308a945f11b06dc0c899 1399 PANTHER PTHR10795 512 863 1.4E-122 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.3E-95 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 PANTHER PTHR10314 1 51 1.7E-28 T 22-04-2016 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 PANTHER PTHR10314 74 154 1.7E-28 T 22-04-2016 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 Pfam PF00290 Tryptophan synthase alpha chain 8 265 6.8E-92 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 Gene3D G3DSA:3.20.20.70 1 265 6.0E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 SUPERFAMILY SSF51366 1 265 4.05E-87 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 265 36.938 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 PANTHER PTHR10314:SF4 1 51 1.7E-28 T 22-04-2016 SAMA_RS11150 4ed2c85916570075b871be092db10cbf 266 PANTHER PTHR10314:SF4 74 154 1.7E-28 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82714 723 809 9.42E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PANTHER PTHR32063 1 1038 0.0 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 38 131 4.45E-26 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 566 670 1.52E-28 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82866 296 497 4.97E-49 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:3.30.2090.10 723 809 1.1E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 809 857 7.06E-30 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 135 182 6.8E-26 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 274 330 6.8E-26 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:3.30.2090.10 182 275 2.3E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:1.10.3850.10 815 1028 2.3E-56 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:1.10.3850.10 281 498 1.5E-59 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:3.30.70.1430 568 670 1.0E-32 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PANTHER PTHR32063:SF13 1 1038 0.0 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82866 832 1027 3.92E-45 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82693 673 722 7.06E-30 T 22-04-2016 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 SUPERFAMILY SSF82714 182 272 1.31E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18470 3c2ac5371509f732144f48963a7c41fa 1046 Gene3D G3DSA:3.30.70.1430 38 140 3.6E-34 T 22-04-2016 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 272 2.2E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 Gene3D G3DSA:1.20.1330.10 54 228 2.9E-53 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 PANTHER PTHR30244:SF1 2 272 7.7E-115 T 22-04-2016 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 PANTHER PTHR30244 2 272 7.7E-115 T 22-04-2016 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 SUPERFAMILY SSF64518 1 272 2.22E-83 T 22-04-2016 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.7E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 PRINTS PR00207 Flagellin signature 37 54 1.1E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 PRINTS PR00207 Flagellin signature 111 134 1.1E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS12075 f176dd54a1ee73b8387ce6f73ea501b2 273 PRINTS PR00207 Flagellin signature 76 95 1.1E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 Gene3D G3DSA:3.90.1150.10 33 79 4.2E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 Gene3D G3DSA:3.90.1150.10 344 442 4.2E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 PANTHER PTHR11986:SF17 1 449 2.9E-117 T 22-04-2016 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 SUPERFAMILY SSF53383 39 441 8.26E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 Gene3D G3DSA:3.40.640.10 80 342 2.0E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 Pfam PF00202 Aminotransferase class-III 44 441 3.0E-87 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS18735 bd6760e39bb45d3dae21a1d0762be051 465 PANTHER PTHR11986 1 449 2.9E-117 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 SUPERFAMILY SSF53335 9 275 9.47E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 271 39.553 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 PANTHER PTHR37426 2 284 7.1E-144 T 22-04-2016 SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 PANTHER PTHR37426:SF1 2 284 7.1E-144 T 22-04-2016 SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 Gene3D G3DSA:3.40.50.150 1 281 1.6E-105 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18515 7e52c2b5fdc887971dbd66d7d6937cd9 284 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 281 3.5E-84 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 SMART SM00052 3 237 3.8E-10 T 22-04-2016 IPR001633 EAL domain SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 Gene3D G3DSA:3.20.20.450 16 229 6.5E-39 T 22-04-2016 IPR001633 EAL domain SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 SUPERFAMILY SSF141868 17 229 6.15E-44 T 22-04-2016 IPR001633 EAL domain SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 PANTHER PTHR33121:SF14 12 229 2.7E-57 T 22-04-2016 SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 Pfam PF00563 EAL domain 17 229 1.9E-40 T 22-04-2016 IPR001633 EAL domain SAMA_RS09925 0e33878f24c20603177a12b739e1c872 262 PANTHER PTHR33121 12 229 2.7E-57 T 22-04-2016 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 SUPERFAMILY SSF52540 9 315 9.77E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 PANTHER PTHR10285:SF7 277 309 2.5E-153 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 PANTHER PTHR10285:SF7 1 261 2.5E-153 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 PIRSF PIRSF000545 1 315 2.1E-142 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 89 243 9.0E-14 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 PANTHER PTHR10285 277 309 2.5E-153 T 22-04-2016 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 PANTHER PTHR10285 1 261 2.5E-153 T 22-04-2016 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 Gene3D G3DSA:3.40.50.300 11 315 1.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 315 6.2E-140 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SAMA_RS01030 9c684f699a2883f4a290fc274974e337 315 Hamap MF_00215 Pantothenate kinase [coaA]. 1 315 178.148 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 Pfam PF07687 Peptidase dimerisation domain 209 291 5.4E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014:SF54 204 279 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.1E-85 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014 330 486 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 Gene3D G3DSA:3.40.630.10 4 181 4.3E-106 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 Gene3D G3DSA:3.40.630.10 397 484 4.3E-106 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014 204 279 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014 4 185 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PIRSF PIRSF016599 1 485 1.8E-206 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 SUPERFAMILY SSF53187 10 182 2.62E-64 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 SUPERFAMILY SSF53187 397 483 2.62E-64 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 Pfam PF01546 Peptidase family M20/M25/M40 73 480 4.0E-22 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014:SF54 330 486 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 PANTHER PTHR11014:SF54 4 185 3.8E-185 T 22-04-2016 SAMA_RS13145 f0fe51ea2891a6c9dbe51215093a2fdc 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 9 482 9.8E-181 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Gene3D G3DSA:3.40.50.2300 10 136 6.5E-33 T 22-04-2016 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Gene3D G3DSA:3.40.50.300 144 291 8.4E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Pfam PF00072 Response regulator receiver domain 12 120 2.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 SUPERFAMILY SSF46689 332 417 1.18E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 PANTHER PTHR32071 4 427 1.8E-145 T 22-04-2016 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 SUPERFAMILY SSF52540 145 349 3.27E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 380 397 3.4E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 397 417 3.4E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 SMART SM00448 9 120 1.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 SUPERFAMILY SSF52172 8 187 7.26E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 PANTHER PTHR32071:SF29 4 427 1.8E-145 T 22-04-2016 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Pfam PF14532 Sigma-54 interaction domain 146 291 2.0E-14 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Gene3D G3DSA:1.10.8.60 293 340 7.8E-18 T 22-04-2016 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Gene3D G3DSA:1.10.10.60 341 417 2.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16885 247ebfbafa6282ccde3634b5e9ce831e 429 Pfam PF02954 Bacterial regulatory protein, Fis family 375 414 1.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS03665 cd32aa4eac341a9ca14862b860649039 200 PANTHER PTHR30178 1 188 2.5E-126 T 22-04-2016 SAMA_RS03665 cd32aa4eac341a9ca14862b860649039 200 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SAMA_RS03665 cd32aa4eac341a9ca14862b860649039 200 PANTHER PTHR30178:SF6 1 188 2.5E-126 T 22-04-2016 SAMA_RS03665 cd32aa4eac341a9ca14862b860649039 200 Pfam PF01184 GPR1/FUN34/yaaH family 4 181 9.1E-36 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 Pfam PF13667 ThiC-associated domain 24 104 7.2E-31 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557 628 655 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557 3 102 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557 194 607 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557 136 166 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 Pfam PF01964 Radical SAM ThiC family 144 591 3.5E-197 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 8.9E-220 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557:SF1 628 655 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557:SF1 3 102 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557:SF1 194 607 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 PANTHER PTHR30557:SF1 136 166 0.0 T 22-04-2016 SAMA_RS09740 195d0b17cda992721117cba7509928cc 664 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 55.898 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 Pfam PF03737 Demethylmenaquinone methyltransferase 23 153 1.5E-43 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 SUPERFAMILY SSF89562 3 158 4.84E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 154 2.1E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 PANTHER PTHR33254:SF1 6 158 3.8E-63 T 22-04-2016 SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 Gene3D G3DSA:3.50.30.40 6 157 1.3E-49 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS09885 6aed9122446c9ab7a6ca26bd465280c5 164 PANTHER PTHR33254 6 158 3.8E-63 T 22-04-2016 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 190 2.7E-39 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 Gene3D G3DSA:3.40.50.1000 82 221 2.0E-42 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 186 3.8E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 PANTHER PTHR18901 2 221 2.0E-70 T 22-04-2016 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 PANTHER PTHR18901:SF14 2 221 2.0E-70 T 22-04-2016 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 218 7.5E-65 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 SUPERFAMILY SSF56784 2 221 4.99E-63 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 Gene3D G3DSA:1.10.150.240 20 81 3.0E-28 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SAMA_RS17495 86b34f9642a190f16b61e3429f8a1c1d 225 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 5 222 34.437 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SAMA_RS16375 54274d77fef91b3b69b2bca6bc5cd012 251 Pfam PF00950 ABC 3 transport family 8 243 1.4E-10 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SAMA_RS16375 54274d77fef91b3b69b2bca6bc5cd012 251 SUPERFAMILY SSF81345 43 237 8.11E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SAMA_RS14570 ec88a10a694c9f2a1532d158a3450bb2 194 Gene3D G3DSA:3.40.50.360 1 180 2.5E-27 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14570 ec88a10a694c9f2a1532d158a3450bb2 194 SUPERFAMILY SSF52218 1 144 1.43E-26 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14570 ec88a10a694c9f2a1532d158a3450bb2 194 PANTHER PTHR30543 1 185 4.2E-30 T 22-04-2016 SAMA_RS14570 ec88a10a694c9f2a1532d158a3450bb2 194 Pfam PF03358 NADPH-dependent FMN reductase 1 141 4.8E-22 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SAMA_RS14570 ec88a10a694c9f2a1532d158a3450bb2 194 PANTHER PTHR30543:SF1 1 185 4.2E-30 T 22-04-2016 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 583 633 3.0E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.7E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.7E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.7E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PRINTS PR01005 Flagellar hook-associated protein signature 410 427 1.7E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 SUPERFAMILY SSF64518 442 635 1.11E-21 T 22-04-2016 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PANTHER PTHR30033:SF1 1 638 1.0E-108 T 22-04-2016 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 SUPERFAMILY SSF64518 118 461 1.07E-18 T 22-04-2016 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 Pfam PF00460 Flagella basal body rod protein 6 35 9.4E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 PANTHER PTHR30033 1 638 1.0E-108 T 22-04-2016 SAMA_RS12085 9cbe9f24f5ed25d082d6e884f561b9f5 638 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 331 1.1E-58 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 PANTHER PTHR10264 1 361 4.3E-159 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 SUPERFAMILY SSF117892 97 229 3.01E-20 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 TIGRFAM TIGR01933 hflK: HflK protein 66 326 1.5E-107 T 22-04-2016 IPR010201 HflK GO:0016021 SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 PANTHER PTHR10264:SF51 1 361 4.3E-159 T 22-04-2016 IPR010201 HflK GO:0016021 SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 SMART SM00244 64 224 5.2E-37 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 Pfam PF01145 SPFH domain / Band 7 family 68 239 6.2E-23 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15765 81b86ee772911f1277a09db3fabe7107 377 Pfam PF12221 Bacterial membrane protein N terminal 1 40 7.3E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal SAMA_RS10285 362f39ca7cd74adcf1609996c1015dc5 301 SUPERFAMILY SSF52540 3 214 3.88E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10285 362f39ca7cd74adcf1609996c1015dc5 301 Pfam PF00005 ABC transporter 19 161 3.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS10285 362f39ca7cd74adcf1609996c1015dc5 301 Gene3D G3DSA:3.40.50.300 3 214 3.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10285 362f39ca7cd74adcf1609996c1015dc5 301 SMART SM00382 28 208 6.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS10285 362f39ca7cd74adcf1609996c1015dc5 301 PANTHER PTHR24220 5 209 1.6E-78 T 22-04-2016 SAMA_RS03015 484193f7bbaac3692e245c0a3768ed27 370 PANTHER PTHR39188 85 370 2.4E-44 T 22-04-2016 SAMA_RS03015 484193f7bbaac3692e245c0a3768ed27 370 Pfam PF11667 Putative zincin peptidase 163 249 3.3E-6 T 22-04-2016 IPR021683 Putative zincin peptidase SAMA_RS05545 d451e575b04de302987843678215c906 945 SUPERFAMILY SSF63411 737 938 5.59E-37 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 Gene3D G3DSA:3.30.830.10 741 925 7.3E-20 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 SUPERFAMILY SSF63411 278 462 7.33E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 PANTHER PTHR11851:SF136 25 861 3.4E-261 T 22-04-2016 SAMA_RS05545 d451e575b04de302987843678215c906 945 SUPERFAMILY SSF63411 512 718 1.25E-38 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 Pfam PF00675 Insulinase (Peptidase family M16) 532 653 1.2E-11 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS05545 d451e575b04de302987843678215c906 945 Pfam PF00675 Insulinase (Peptidase family M16) 59 187 1.3E-18 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS05545 d451e575b04de302987843678215c906 945 PANTHER PTHR11851 25 861 3.4E-261 T 22-04-2016 SAMA_RS05545 d451e575b04de302987843678215c906 945 SUPERFAMILY SSF63411 47 255 1.1E-55 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 Gene3D G3DSA:3.30.830.10 283 458 4.1E-20 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 Pfam PF05193 Peptidase M16 inactive domain 682 857 1.7E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS05545 d451e575b04de302987843678215c906 945 Pfam PF05193 Peptidase M16 inactive domain 218 392 2.1E-25 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS05545 d451e575b04de302987843678215c906 945 Gene3D G3DSA:3.30.830.10 516 727 5.4E-44 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS05545 d451e575b04de302987843678215c906 945 Gene3D G3DSA:3.30.830.10 47 264 6.1E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 3.7E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 Gene3D G3DSA:1.10.10.10 128 229 3.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 SMART SM00448 5 115 1.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 PANTHER PTHR26402:SF292 5 228 2.4E-74 T 22-04-2016 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 SMART SM00862 150 226 3.6E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 PANTHER PTHR26402 5 228 2.4E-74 T 22-04-2016 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 SUPERFAMILY SSF52172 7 182 3.7E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 Gene3D G3DSA:3.40.50.2300 6 127 4.7E-34 T 22-04-2016 SAMA_RS14130 c9bdf612fa2b30255ddb009db5033f8a 233 Pfam PF00072 Response regulator receiver domain 8 116 1.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16440 85a11dcf13d4299066a2f6f739decf6b 174 Pfam PF11454 Protein of unknown function (DUF3016) 32 168 3.1E-47 T 22-04-2016 IPR021557 Protein of unknown function DUF3016 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 PANTHER PTHR30469:SF16 1 341 9.5E-141 T 22-04-2016 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 343 2.9E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 SUPERFAMILY SSF111369 52 267 9.94E-41 T 22-04-2016 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 Gene3D G3DSA:2.40.50.100 157 188 7.8E-15 T 22-04-2016 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 Gene3D G3DSA:2.40.50.100 62 96 7.8E-15 T 22-04-2016 SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 262 6.1E-31 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS09975 261fb7d3a0166f7ae827f402ffde6350 361 PANTHER PTHR30469 1 341 9.5E-141 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 2 382 57.302 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 PANTHER PTHR11014:SF75 7 383 2.1E-171 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 SUPERFAMILY SSF55031 180 294 1.09E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Pfam PF07687 Peptidase dimerisation domain 177 288 1.8E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Gene3D G3DSA:3.30.70.360 189 289 3.9E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 PANTHER PTHR11014 7 383 2.1E-171 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 13 377 2.3E-134 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Pfam PF01546 Peptidase family M20/M25/M40 75 378 9.6E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Gene3D G3DSA:3.40.630.10 322 381 5.3E-61 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 Gene3D G3DSA:3.40.630.10 7 188 5.3E-61 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 SUPERFAMILY SSF53187 5 179 2.57E-55 T 22-04-2016 SAMA_RS01380 d769c236791b964641eb5933ae4f1d82 383 SUPERFAMILY SSF53187 304 379 2.57E-55 T 22-04-2016 SAMA_RS07360 d67aa5be06bc79d804fbd8c08a69cadb 133 PANTHER PTHR33337 1 125 5.3E-44 T 22-04-2016 SAMA_RS07360 d67aa5be06bc79d804fbd8c08a69cadb 133 SUPERFAMILY SSF51316 2 128 6.8E-45 T 22-04-2016 IPR011057 Mss4-like SAMA_RS07360 d67aa5be06bc79d804fbd8c08a69cadb 133 Gene3D G3DSA:3.90.1590.10 2 126 1.0E-40 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS07360 d67aa5be06bc79d804fbd8c08a69cadb 133 PANTHER PTHR33337:SF4 1 125 5.3E-44 T 22-04-2016 SAMA_RS07360 d67aa5be06bc79d804fbd8c08a69cadb 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 111 3.8E-22 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS01520 3bc8268d685332939473644100080971 520 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 7 23 5.8E-9 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SAMA_RS01520 3bc8268d685332939473644100080971 520 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 167 181 5.8E-9 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SAMA_RS01520 3bc8268d685332939473644100080971 520 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 121 512 6.1E-36 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SAMA_RS01520 3bc8268d685332939473644100080971 520 Gene3D G3DSA:3.90.120.10 253 303 1.1E-36 T 22-04-2016 SAMA_RS01520 3bc8268d685332939473644100080971 520 Gene3D G3DSA:3.90.120.10 428 504 1.1E-36 T 22-04-2016 SAMA_RS01520 3bc8268d685332939473644100080971 520 SUPERFAMILY SSF53335 229 302 2.69E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 SUPERFAMILY SSF53335 116 197 2.69E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 SUPERFAMILY SSF53335 379 515 2.69E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 SUPERFAMILY SSF53335 6 49 2.69E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 PANTHER PTHR10629 371 520 6.2E-42 T 22-04-2016 SAMA_RS01520 3bc8268d685332939473644100080971 520 PANTHER PTHR10629 229 318 6.2E-42 T 22-04-2016 SAMA_RS01520 3bc8268d685332939473644100080971 520 PANTHER PTHR10629 4 197 6.2E-42 T 22-04-2016 SAMA_RS01520 3bc8268d685332939473644100080971 520 Pfam PF00145 C-5 cytosine-specific DNA methylase 120 513 5.4E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 Gene3D G3DSA:3.40.50.150 228 252 7.7E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 Gene3D G3DSA:3.40.50.150 7 48 7.7E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01520 3bc8268d685332939473644100080971 520 Gene3D G3DSA:3.40.50.150 97 182 7.7E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS01925 76e9e5a12b4af504a7879fd9b9b628c2 299 SUPERFAMILY SSF51261 139 293 2.72E-54 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS01925 76e9e5a12b4af504a7879fd9b9b628c2 299 PANTHER PTHR21666 37 294 2.2E-47 T 22-04-2016 SAMA_RS01925 76e9e5a12b4af504a7879fd9b9b628c2 299 Pfam PF01551 Peptidase family M23 195 290 7.9E-31 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS01925 76e9e5a12b4af504a7879fd9b9b628c2 299 Gene3D G3DSA:2.70.70.10 164 294 7.3E-46 T 22-04-2016 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 SMART SM00448 145 258 2.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 SMART SM00448 9 123 5.4E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 Gene3D G3DSA:3.40.50.2300 7 127 1.2E-17 T 22-04-2016 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 PANTHER PTHR26402 145 263 1.1E-34 T 22-04-2016 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 SUPERFAMILY SSF52172 143 264 1.32E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 Gene3D G3DSA:3.40.50.2300 143 264 2.3E-34 T 22-04-2016 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 SUPERFAMILY SSF52172 8 128 2.13E-19 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 Pfam PF00072 Response regulator receiver domain 11 123 2.0E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16455 3eb9f6b364b117b9077927b8fa48ba99 266 Pfam PF00072 Response regulator receiver domain 147 258 1.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 PANTHER PTHR11019 32 293 1.9E-74 T 22-04-2016 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 SMART SM00342 211 294 1.5E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 SUPERFAMILY SSF46689 196 245 5.38E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 PANTHER PTHR11019:SF81 32 293 1.9E-74 T 22-04-2016 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 182 3.5E-47 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 SUPERFAMILY SSF46689 247 292 8.51E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 Gene3D G3DSA:1.10.10.60 196 247 6.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 Gene3D G3DSA:1.10.10.60 248 291 6.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14195 22ed8857c818c2639824801d67be77de 299 Pfam PF12833 Helix-turn-helix domain 217 291 6.8E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 SUPERFAMILY SSF56645 120 356 1.44E-41 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Gene3D G3DSA:1.20.140.10 350 508 3.3E-25 T 22-04-2016 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 PANTHER PTHR10909 50 532 1.7E-293 T 22-04-2016 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 SUPERFAMILY SSF47203 361 508 3.7E-23 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 140 233 5.3E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Gene3D G3DSA:2.40.110.10 238 349 3.4E-15 T 22-04-2016 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Gene3D G3DSA:1.10.540.10 96 233 1.6E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 5.1E-110 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 PANTHER PTHR10909:SF321 50 532 1.7E-293 T 22-04-2016 SAMA_RS09790 79f9c2203a13ad8e9348d5219b69c2d4 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.3E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 Pfam PF13378 Enolase C-terminal domain-like 167 321 9.7E-14 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 Gene3D G3DSA:3.20.20.120 150 355 4.5E-41 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 SUPERFAMILY SSF51604 147 342 3.93E-42 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 SMART SM00922 153 246 3.3E-10 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 PANTHER PTHR13794 142 337 1.9E-39 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 PANTHER PTHR13794:SF8 142 337 1.9E-39 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 SUPERFAMILY SSF54826 5 121 1.29E-14 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 198 229 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 Gene3D G3DSA:3.30.390.10 4 132 9.7E-25 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SAMA_RS18005 3340ebc97d924bd9ca9f07394fa3a58b 367 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 9 335 1.2E-50 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Gene3D G3DSA:1.20.1640.10 290 494 4.8E-41 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82714 184 267 3.01E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PANTHER PTHR32063 1 1016 0.0 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PANTHER PTHR32063:SF18 1 1016 0.0 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82693 40 135 3.14E-20 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Gene3D G3DSA:3.30.70.1430 40 141 5.7E-26 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Gene3D G3DSA:1.10.3850.10 801 1014 4.3E-55 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82866 292 490 5.23E-34 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82866 793 1015 6.54E-46 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Gene3D G3DSA:3.30.2090.10 715 790 2.4E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Gene3D G3DSA:3.30.2090.10 184 267 3.2E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 Pfam PF00873 AcrB/AcrD/AcrF family 5 1012 3.8E-166 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.8E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82714 714 790 9.29E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82693 136 182 2.56E-20 T 22-04-2016 SAMA_RS03565 02a88222ad392712e16c3021b8332fd7 1028 SUPERFAMILY SSF82693 270 325 2.56E-20 T 22-04-2016 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 Pfam PF01253 Translation initiation factor SUI1 33 102 3.4E-15 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 PANTHER PTHR12789 9 109 1.0E-30 T 22-04-2016 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 PIRSF PIRSF037511 1 109 1.7E-32 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 SUPERFAMILY SSF55159 5 105 4.05E-24 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 Gene3D G3DSA:3.30.780.10 29 109 9.4E-31 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SAMA_RS12900 8247ef3e67bca8b6f2f030c58d98b637 109 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 9 109 3.5E-34 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Gene3D G3DSA:3.30.470.20 197 387 1.2E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 SUPERFAMILY SSF51246 317 389 2.04E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 PANTHER PTHR11609 1 380 2.6E-220 T 22-04-2016 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Gene3D G3DSA:3.40.50.20 3 118 3.0E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 SUPERFAMILY SSF52440 1 110 1.58E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 1.6E-4 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Gene3D G3DSA:3.30.1490.20 122 196 1.1E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Pfam PF02222 ATP-grasp domain 121 293 2.2E-54 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 7.3E-186 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 PANTHER PTHR11609:SF7 1 380 2.6E-220 T 22-04-2016 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 SUPERFAMILY SSF56059 111 313 1.43E-55 T 22-04-2016 SAMA_RS14670 6cd8a025a7d6cf56ac7c3f772bece88b 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 52.369 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 PANTHER PTHR30537:SF26 1 299 2.3E-154 T 22-04-2016 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 SUPERFAMILY SSF46785 3 85 5.67E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 SUPERFAMILY SSF53850 94 295 3.1E-40 T 22-04-2016 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 Gene3D G3DSA:3.40.190.10 180 258 9.4E-20 T 22-04-2016 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 PANTHER PTHR30537 1 299 2.3E-154 T 22-04-2016 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 Gene3D G3DSA:1.10.10.10 1 86 2.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 Pfam PF03466 LysR substrate binding domain 94 292 1.1E-39 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 7.2E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12690 4bf5c0e6560d9ed6809aa5564913ecd7 303 Gene3D G3DSA:3.40.190.10 94 179 3.1E-36 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 Gene3D G3DSA:3.40.190.10 24 106 7.7E-12 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 Gene3D G3DSA:3.40.190.10 210 246 7.7E-12 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 SUPERFAMILY SSF53850 27 245 1.09E-26 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 PANTHER PTHR35936 1 256 2.3E-19 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 Gene3D G3DSA:3.40.190.10 111 190 9.0E-4 T 22-04-2016 SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 4.8E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS15225 922b88d330b9bdda539318f0578b29ee 270 SMART SM00062 26 249 1.7E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS00850 b8dfb1c385463be0ba628de595566b5f 307 Pfam PF11356 Type II secretion system protein C 25 166 4.4E-45 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal SAMA_RS00850 b8dfb1c385463be0ba628de595566b5f 307 Gene3D G3DSA:2.30.42.10 250 301 7.3E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS00850 b8dfb1c385463be0ba628de595566b5f 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 23 302 2.0E-56 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 SAMA_RS00850 b8dfb1c385463be0ba628de595566b5f 307 SUPERFAMILY SSF50156 211 303 3.74E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.3E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 SMART SM01403 7 101 6.1E-57 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.4E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.4E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.4E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 PANTHER PTHR11700 1 102 1.9E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 Gene3D G3DSA:3.30.70.600 3 102 3.2E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 SUPERFAMILY SSF54999 5 101 1.96E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.7E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SAMA_RS01120 ba33c01741ab82e9324bc0dffe58c30c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.244 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SAMA_RS18830 fd56b50cd1f652852abdeca7a592b840 717 SUPERFAMILY SSF48208 268 700 4.99E-97 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS18830 fd56b50cd1f652852abdeca7a592b840 717 Pfam PF01204 Trehalase 390 657 1.1E-19 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SAMA_RS18830 fd56b50cd1f652852abdeca7a592b840 717 PANTHER PTHR23403 391 654 5.8E-21 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.6E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.6E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.6E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.6E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 Pfam PF00106 short chain dehydrogenase 5 189 3.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 SUPERFAMILY SSF51735 2 239 4.12E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07155 e2c3db7f03175fb425c852a156d91516 246 Gene3D G3DSA:3.40.50.720 2 190 1.3E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 Gene3D G3DSA:1.10.150.280 32 99 1.5E-21 T 22-04-2016 SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 SUPERFAMILY SSF47781 29 100 2.78E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 102 3.7E-24 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 SMART SM00278 81 100 270.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 SMART SM00278 51 70 1.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 PANTHER PTHR21180 37 103 4.3E-23 T 22-04-2016 SAMA_RS06515 f817fb0966b6b03430d9b8b5b9560f80 103 Pfam PF12836 Helix-hairpin-helix motif 40 101 2.5E-23 T 22-04-2016 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 581 6.5E-169 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PANTHER PTHR11956 1 581 4.7E-246 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 1.3E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 309 330 1.3E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 1.3E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 1.3E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 SMART SM00836 466 581 2.2E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Gene3D G3DSA:3.40.50.620 114 459 5.6E-113 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 SUPERFAMILY SSF55190 2 100 5.36E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Pfam PF05746 DALR anticodon binding domain 466 581 2.1E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 581 26.95 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 126 137 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 SMART SM01016 3 91 1.2E-35 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Pfam PF00750 tRNA synthetases class I (R) 102 452 1.9E-130 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 SUPERFAMILY SSF47323 460 581 2.81E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 PANTHER PTHR11956:SF1 1 581 4.7E-246 T 22-04-2016 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 2.6E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Gene3D G3DSA:1.10.730.10 460 581 3.1E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 Gene3D G3DSA:3.30.1360.70 2 107 5.2E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SAMA_RS02385 747b5e0a6f2cf5d3c9871dd9706dfa89 581 SUPERFAMILY SSF52374 113 459 2.14E-89 T 22-04-2016 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 PANTHER PTHR37326 1 336 1.2E-104 T 22-04-2016 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 PANTHER PTHR37326:SF1 1 336 1.2E-104 T 22-04-2016 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 316 1.0E-65 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 PIRSF PIRSF039012 1 322 4.8E-86 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 Gene3D G3DSA:3.40.630.10 40 231 5.1E-25 T 22-04-2016 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 SUPERFAMILY SSF53187 23 316 3.64E-74 T 22-04-2016 SAMA_RS05720 68d0c43fa06d269ad0327fafe8415d59 337 Gene3D G3DSA:2.40.50.100 247 299 3.2E-4 T 22-04-2016 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 PANTHER PTHR26402 6 212 2.8E-96 T 22-04-2016 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 SUPERFAMILY SSF52172 4 133 3.42E-28 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 Gene3D G3DSA:3.40.50.2300 3 154 1.6E-29 T 22-04-2016 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 SMART SM00448 6 121 3.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 Gene3D G3DSA:1.10.10.10 155 212 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 PANTHER PTHR26402:SF474 6 212 2.8E-96 T 22-04-2016 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 207 2.6E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 Pfam PF00072 Response regulator receiver domain 8 121 1.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 SMART SM00421 152 209 1.7E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS10820 76b8136014faef6440abe105fd37033d 223 SUPERFAMILY SSF46894 143 213 2.72E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 Gene3D G3DSA:1.10.10.60 299 353 1.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 351 2.6E-165 T 22-04-2016 IPR014317 Transcription activator PspF SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 334 354 1.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 317 334 1.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 Pfam PF00158 Sigma-54 interaction domain 10 173 4.6E-59 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 Gene3D G3DSA:3.40.50.300 7 181 7.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 SMART SM00382 30 181 2.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 Pfam PF02954 Bacterial regulatory protein, Fis family 311 351 5.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 SUPERFAMILY SSF46689 300 353 4.48E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 PANTHER PTHR32071:SF38 4 355 6.1E-218 T 22-04-2016 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 Gene3D G3DSA:1.10.8.60 182 246 2.2E-20 T 22-04-2016 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 PANTHER PTHR32071 4 355 6.1E-218 T 22-04-2016 SAMA_RS06480 b94d9cc5d4bb096aeca10e7c3126811a 357 SUPERFAMILY SSF52540 9 250 1.77E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 SUPERFAMILY SSF55874 317 419 1.17E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PANTHER PTHR24423 11 18 9.4E-14 T 22-04-2016 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PANTHER PTHR24423 185 420 9.4E-14 T 22-04-2016 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 421 1.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 Gene3D G3DSA:3.30.565.10 320 421 7.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 4.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 4.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 4.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 SMART SM00387 313 421 2.0E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PANTHER PTHR24423:SF427 11 18 9.4E-14 T 22-04-2016 SAMA_RS16605 42e313d95ccd2f63fdedc6d416fa3c8f 423 PANTHER PTHR24423:SF427 185 420 9.4E-14 T 22-04-2016 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 18 132 2.1E-18 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 PANTHER PTHR10516:SF320 110 235 2.1E-49 T 22-04-2016 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 SUPERFAMILY SSF54534 27 230 6.29E-50 T 22-04-2016 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 140 228 4.3E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 Gene3D G3DSA:3.10.50.40 113 234 2.6E-46 T 22-04-2016 SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 PANTHER PTHR10516 110 235 2.1E-49 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS14110 8ba80b5e01be6e1101f84c308cb9f307 236 Gene3D G3DSA:1.10.287.460 17 112 7.6E-17 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SAMA_RS17630 70d4599394114df3883147fd1506e040 799 SUPERFAMILY SSF82866 201 406 1.18E-17 T 22-04-2016 SAMA_RS17630 70d4599394114df3883147fd1506e040 799 SUPERFAMILY SSF82866 632 790 1.26E-18 T 22-04-2016 SAMA_RS17630 70d4599394114df3883147fd1506e040 799 Pfam PF03176 MMPL family 205 398 7.9E-5 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SAMA_RS17630 70d4599394114df3883147fd1506e040 799 Gene3D G3DSA:1.20.1640.10 634 788 5.8E-14 T 22-04-2016 SAMA_RS17630 70d4599394114df3883147fd1506e040 799 Gene3D G3DSA:1.20.1640.10 227 407 6.2E-14 T 22-04-2016 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 211 230 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 1.1E-17 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 Pfam PF00375 Sodium:dicarboxylate symporter family 11 393 8.7E-132 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PANTHER PTHR11958:SF59 8 412 1.0E-209 T 22-04-2016 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 PANTHER PTHR11958 8 412 1.0E-209 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 SUPERFAMILY SSF118215 11 395 2.48E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS05535 dfeacd609adee348de3e1111a8bcd94e 417 Gene3D G3DSA:1.10.3860.10 4 400 1.9E-129 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 PANTHER PTHR24220 22 369 3.8E-195 T 22-04-2016 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 Pfam PF08402 TOBE domain 297 376 6.3E-15 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 SUPERFAMILY SSF52540 20 261 6.96E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 Pfam PF00005 ABC transporter 37 178 5.8E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 PANTHER PTHR24220:SF481 22 369 3.8E-195 T 22-04-2016 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 Gene3D G3DSA:3.40.50.300 12 254 4.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 51 376 2.0E-129 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 SUPERFAMILY SSF50331 254 376 1.76E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SAMA_RS13835 4eecf43b4b095842b269b47b065cfb26 378 SMART SM00382 45 228 3.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 14 418 1.5E-232 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Pfam PF00175 Oxidoreductase NAD-binding domain 288 396 4.3E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Gene3D G3DSA:3.10.20.30 47 131 3.8E-21 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Gene3D G3DSA:3.40.50.80 287 403 3.4E-41 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 SUPERFAMILY SSF52343 268 413 9.43E-37 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Pfam PF00970 Oxidoreductase FAD-binding domain 210 277 7.6E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 SUPERFAMILY SSF63380 116 282 1.33E-34 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 PANTHER PTHR19370 73 187 1.5E-144 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 PANTHER PTHR19370 216 418 1.5E-144 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 PANTHER PTHR19370:SF32 73 187 1.5E-144 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 PANTHER PTHR19370:SF32 216 418 1.5E-144 T 22-04-2016 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 12 418 61.742 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 PIRSF PIRSF000044 8 418 2.0E-218 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 56 125 8.4E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 SUPERFAMILY SSF54292 49 133 1.43E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS13220 7bb66071dc4aaa8dbf1e0aa6d69b1315 418 Gene3D G3DSA:2.40.30.10 135 275 1.7E-58 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SUPERFAMILY SSF55021 623 695 1.49E-8 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SMART SM00471 41 153 1.3E-10 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Pfam PF02824 TGS domain 389 448 1.2E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Gene3D G3DSA:3.10.20.30 388 450 3.7E-21 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SMART SM00954 235 345 4.9E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SUPERFAMILY SSF81271 376 448 4.91E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Gene3D G3DSA:3.30.460.10 178 324 2.5E-49 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Pfam PF13328 HD domain 26 175 1.4E-53 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.5E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 PANTHER PTHR21262:SF0 3 699 0.0 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Pfam PF13291 ACT domain 622 697 9.2E-19 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SUPERFAMILY SSF109604 4 189 1.54E-74 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 SUPERFAMILY SSF81301 180 393 3.76E-63 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 PANTHER PTHR21262 3 699 0.0 T 22-04-2016 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 695 3.9E-266 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SAMA_RS01425 55f156cb809771ff535875b4de464845 699 Gene3D G3DSA:3.30.70.260 623 693 4.4E-12 T 22-04-2016 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 SUPERFAMILY SSF56053 1 82 1.2E-24 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.6E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PANTHER PTHR11655:SF14 1 176 6.5E-85 T 22-04-2016 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 Gene3D G3DSA:3.90.930.12 83 177 8.9E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 Pfam PF00347 Ribosomal protein L6 90 164 1.0E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 Pfam PF00347 Ribosomal protein L6 11 82 3.0E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PANTHER PTHR11655 1 176 6.5E-85 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 SUPERFAMILY SSF56053 83 177 9.78E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PIRSF PIRSF002162 1 177 2.3E-41 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.658 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 9.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 9.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 9.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS01200 b0e220bd181ccb3b3a820dbfd82d4bbf 177 Gene3D G3DSA:3.90.930.12 2 82 2.5E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SAMA_RS15445 3ecc082e3976cc4d09a3c364660b4446 450 Gene3D G3DSA:3.30.1330.60 316 420 4.6E-8 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS15445 3ecc082e3976cc4d09a3c364660b4446 450 Pfam PF00691 OmpA family 318 418 1.3E-5 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS15445 3ecc082e3976cc4d09a3c364660b4446 450 SUPERFAMILY SSF103088 316 395 1.96E-5 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 7.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 SUPERFAMILY SSF46955 1 112 4.03E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 SMART SM00422 1 69 2.0E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 PANTHER PTHR30204 1 105 1.3E-19 T 22-04-2016 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 Pfam PF13411 MerR HTH family regulatory protein 2 62 8.4E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 Gene3D G3DSA:1.10.1660.10 1 112 4.6E-29 T 22-04-2016 SAMA_RS14300 c58def7a1d31620be1f60d1bb21d2429 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 Gene3D G3DSA:1.10.560.10 4 188 2.6E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.0E-94 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 SUPERFAMILY SSF48592 373 525 1.98E-32 T 22-04-2016 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 SUPERFAMILY SSF52029 184 376 3.74E-84 T 22-04-2016 IPR027409 GroEL-like apical domain SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.0E-254 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 542 41.597 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 Gene3D G3DSA:1.10.560.10 367 518 6.1E-40 T 22-04-2016 IPR027413 GroEL-like equatorial domain SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 SUPERFAMILY SSF48592 3 230 4.19E-66 T 22-04-2016 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 Gene3D G3DSA:3.50.7.10 189 366 3.5E-99 T 22-04-2016 IPR027409 GroEL-like apical domain SAMA_RS16295 2341e5bb28102ef8689f6870b3550625 545 PANTHER PTHR11353 2 545 1.1E-248 T 22-04-2016 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 6 551 2.9E-209 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 324 7.5E-39 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 SUPERFAMILY SSF52518 362 553 1.38E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 PANTHER PTHR18968 1 556 3.2E-258 T 22-04-2016 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 SUPERFAMILY SSF52467 185 346 1.27E-53 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Gene3D G3DSA:3.40.50.970 5 176 3.4E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Gene3D G3DSA:3.40.50.1220 183 346 2.0E-53 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Gene3D G3DSA:3.40.50.970 350 554 1.4E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 1.4E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 527 9.2E-51 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 PANTHER PTHR18968:SF116 1 556 3.2E-258 T 22-04-2016 SAMA_RS17095 8981139a739234c1277d1b714d158f27 556 SUPERFAMILY SSF52518 2 178 4.26E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 Pfam PF02769 AIR synthase related protein, C-terminal domain 165 316 4.7E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 PANTHER PTHR30303:SF0 5 338 1.1E-147 T 22-04-2016 SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 PIRSF PIRSF005644 5 338 3.2E-124 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 Gene3D G3DSA:3.30.1330.10 22 153 2.9E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 10 338 1.0E-134 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 Pfam PF00586 AIR synthase related protein, N-terminal domain 42 152 1.0E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 SUPERFAMILY SSF55326 6 153 4.54E-33 T 22-04-2016 SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 Gene3D G3DSA:3.90.650.10 163 325 1.9E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 SUPERFAMILY SSF56042 162 333 1.64E-42 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS08720 bd2eed085d7cf782cd651e656508e89a 338 PANTHER PTHR30303 5 338 1.1E-147 T 22-04-2016 SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Pfam PF00005 ABC transporter 328 459 1.2E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Pfam PF00005 ABC transporter 10 176 8.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 SUPERFAMILY SSF52540 3 229 6.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Gene3D G3DSA:3.40.50.300 124 273 2.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Gene3D G3DSA:3.40.50.300 2 92 2.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 PANTHER PTHR19211 1 518 0.0 T 22-04-2016 SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 PANTHER PTHR19211:SF38 1 518 0.0 T 22-04-2016 SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Gene3D G3DSA:3.40.50.300 311 520 6.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 SUPERFAMILY SSF52540 288 519 3.35E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 SMART SM00382 18 230 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 SMART SM00382 336 504 5.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07225 7aeae47866847d480e92aa53d8713635 523 Pfam PF12848 ABC transporter 216 301 6.0E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 SUPERFAMILY SSF53223 756 942 3.64E-24 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606:SF1 677 1099 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606:SF1 13 150 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606:SF1 217 566 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606:SF1 1124 1369 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 SUPERFAMILY SSF51735 947 1049 1.64E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 SUPERFAMILY SSF51735 1085 1278 1.64E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PIRSF PIRSF036761 1 1610 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606 677 1099 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606 13 150 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606 217 566 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 PANTHER PTHR11606 1124 1369 0.0 T 22-04-2016 SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 Gene3D G3DSA:3.40.50.720 1110 1213 7.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS08290 a790ba960be97bbd11a46b2dbce39cf6 1613 Gene3D G3DSA:3.40.50.720 944 1055 7.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14190 1ea34bc10ea1cc0992eb44e4dc30ba01 140 PANTHER PTHR33570 1 134 1.8E-43 T 22-04-2016 SAMA_RS14190 1ea34bc10ea1cc0992eb44e4dc30ba01 140 SUPERFAMILY SSF51182 15 131 1.78E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS14190 1ea34bc10ea1cc0992eb44e4dc30ba01 140 PANTHER PTHR33570:SF5 1 134 1.8E-43 T 22-04-2016 SAMA_RS14190 1ea34bc10ea1cc0992eb44e4dc30ba01 140 Pfam PF07883 Cupin domain 44 105 7.8E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SAMA_RS14190 1ea34bc10ea1cc0992eb44e4dc30ba01 140 Gene3D G3DSA:2.60.120.10 15 131 5.0E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PANTHER PTHR32063 450 1065 0.0 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PANTHER PTHR32063 2 433 0.0 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82866 316 534 1.31E-41 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82693 43 130 1.78E-20 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PANTHER PTHR32063:SF24 450 1065 0.0 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PANTHER PTHR32063:SF24 2 433 0.0 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82866 836 1057 7.98E-53 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Pfam PF00873 AcrB/AcrD/AcrF family 6 1054 8.2E-255 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82693 291 342 1.26E-9 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82693 144 186 1.26E-9 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82693 594 693 7.32E-8 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82714 751 834 5.75E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 SUPERFAMILY SSF82714 187 274 1.12E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1061 1.7E-292 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 3.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 3.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 3.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 PRINTS PR00702 Acriflavin resistance protein family signature 579 596 3.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Gene3D G3DSA:1.10.3850.10 298 535 2.1E-58 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Gene3D G3DSA:1.10.3850.10 841 1057 1.5E-60 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Gene3D G3DSA:3.30.70.1430 42 143 2.7E-24 T 22-04-2016 SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Gene3D G3DSA:3.30.2090.10 187 275 7.8E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS16610 676f4869d7d5958bedc4a90b22011f94 1066 Gene3D G3DSA:3.30.2090.10 751 834 2.6E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 Gene3D G3DSA:2.70.70.10 21 166 6.3E-56 T 22-04-2016 SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.5E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 5.6E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 SUPERFAMILY SSF51261 11 166 2.62E-53 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS08615 88f3d18dc39c825f9191d54c93b376df 169 PANTHER PTHR30175 1 118 1.2E-48 T 22-04-2016 SAMA_RS15285 d61b3b645f9d7ffd20ff9e62a252aaac 143 PANTHER PTHR33931:SF3 9 132 5.0E-42 T 22-04-2016 SAMA_RS15285 d61b3b645f9d7ffd20ff9e62a252aaac 143 Pfam PF03788 LrgA family 32 124 2.1E-20 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 SAMA_RS15285 d61b3b645f9d7ffd20ff9e62a252aaac 143 PANTHER PTHR33931 9 132 5.0E-42 T 22-04-2016 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 PIRSF PIRSF006603 1 450 4.1E-107 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 416 1.3E-54 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 PANTHER PTHR11206:SF142 1 443 1.7E-224 T 22-04-2016 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 PANTHER PTHR11206 1 443 1.7E-224 T 22-04-2016 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 Pfam PF01554 MatE 247 407 1.6E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS16305 6869b89abaf1a4e5d1d92c33bb45a38f 455 Pfam PF01554 MatE 22 182 5.1E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 SUPERFAMILY SSF143975 1 418 1.1E-147 T 22-04-2016 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 SUPERFAMILY SSF52016 419 600 8.63E-57 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 PANTHER PTHR21000 1 608 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 600 0.0 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 PANTHER PTHR21000:SF9 1 608 0.0 T 22-04-2016 SAMA_RS09445 ee7083e14963c1754f6e62ef0ec65df2 608 Pfam PF00920 Dehydratase family 65 598 3.1E-158 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PANTHER PTHR11902 1 423 7.4E-279 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 ProSitePatterns PS00164 Enolase signature. 338 351 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 Gene3D G3DSA:3.30.390.10 3 127 1.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 SMART SM01193 4 134 2.2E-91 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 7.6E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 Gene3D G3DSA:3.20.20.120 128 428 4.3E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 SUPERFAMILY SSF51604 143 425 1.27E-128 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 427 3.1E-140 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 SMART SM01192 143 429 2.8E-219 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.6E-57 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PIRSF PIRSF001400 1 429 5.6E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 315 326 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 338 352 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 165 178 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 107 123 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 367 384 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 PRINTS PR00148 Enolase signature 37 51 1.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 SUPERFAMILY SSF54826 3 138 4.64E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SAMA_RS05400 3c5cf54c2e596095a3240a91a1f56456 431 Hamap MF_00318 Enolase [eno]. 2 415 44.124 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 8.1E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 8.1E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 SUPERFAMILY SSF55874 235 385 1.57E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 SUPERFAMILY SSF47384 166 244 1.14E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 SMART SM00387 290 397 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 Gene3D G3DSA:3.30.565.10 249 393 1.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 391 1.6E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 Gene3D G3DSA:1.10.287.130 177 240 5.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 SMART SM00388 183 244 7.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 PANTHER PTHR24423 124 398 2.7E-35 T 22-04-2016 SAMA_RS03350 c15ef32bdcf271f0b57026e7ab8ce4c7 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 185 243 1.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 Gene3D G3DSA:1.10.530.10 212 326 5.9E-48 T 22-04-2016 SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 Gene3D G3DSA:1.10.530.10 77 131 5.9E-48 T 22-04-2016 SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 29 326 3.0E-77 T 22-04-2016 IPR011970 Lytic murein transglycosylase SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 SUPERFAMILY SSF53955 16 328 4.27E-67 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 Pfam PF13406 Transglycosylase SLT domain 29 323 3.1E-79 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 PANTHER PTHR30163:SF2 9 326 7.8E-67 T 22-04-2016 SAMA_RS10085 5cdabf04a3b20d238d1aabebff4ff457 331 PANTHER PTHR30163 9 326 7.8E-67 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SAMA_RS07670 47f4fbc2d21d1fd1ae32ecdd7b01640c 363 Pfam PF09925 Predicted membrane protein (DUF2157) 31 181 6.5E-34 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 SUPERFAMILY SSF52833 4 72 9.06E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 184 7.6E-11 T 22-04-2016 SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 SUPERFAMILY SSF47616 93 198 2.46E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 Gene3D G3DSA:3.40.30.10 6 77 3.2E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 PANTHER PTHR11260 7 184 1.1E-22 T 22-04-2016 SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 76 1.5E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS16195 cae2e7516e4c76067e08689597c5eabc 216 Gene3D G3DSA:1.20.1050.10 96 196 1.3E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 PANTHER PTHR33360:SF2 2 146 7.3E-57 T 22-04-2016 SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 Pfam PF01797 Transposase IS200 like 12 130 7.4E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 Gene3D G3DSA:3.30.70.1290 1 132 5.6E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 SUPERFAMILY SSF143422 1 131 3.01E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 SMART SM01321 11 130 3.1E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS08140 8c48d177ef637eb7ce51bb7a1f8bdf88 148 PANTHER PTHR33360 2 146 7.3E-57 T 22-04-2016 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 Pfam PF00072 Response regulator receiver domain 7 118 6.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 Gene3D G3DSA:3.40.50.2300 3 155 7.7E-31 T 22-04-2016 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 Gene3D G3DSA:1.10.10.10 156 214 4.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 SUPERFAMILY SSF52172 5 130 6.69E-28 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 PANTHER PTHR26402:SF458 5 214 1.2E-57 T 22-04-2016 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 SMART SM00448 5 118 6.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 SMART SM00421 151 208 1.9E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 6.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 SUPERFAMILY SSF46894 141 214 5.44E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 PANTHER PTHR26402 5 214 1.2E-57 T 22-04-2016 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS09805 ad9510955e35254f38e198e6ef1b98aa 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03200 104d40e03efb117ecfb8bcf717e6457a 158 Pfam PF11697 Protein of unknown function (DUF3293) 32 102 8.7E-20 T 22-04-2016 IPR021710 Protein of unknown function DUF3293 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 207 2.0E-19 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 SUPERFAMILY SSF55681 70 265 2.11E-55 T 22-04-2016 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 SUPERFAMILY SSF50037 269 315 1.46E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Gene3D G3DSA:2.30.30.100 269 317 2.1E-21 T 22-04-2016 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Pfam PF02237 Biotin protein ligase C terminal domain 269 315 5.2E-10 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Pfam PF08279 HTH domain 6 59 1.1E-16 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 315 3.0E-62 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Gene3D G3DSA:3.30.930.10 72 266 7.6E-55 T 22-04-2016 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Gene3D G3DSA:1.10.10.10 2 63 1.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 315 31.93 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 PANTHER PTHR12835 8 315 6.5E-83 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SAMA_RS01025 cd2375cdc8a992cf49eeee42eb9e8b9f 317 SUPERFAMILY SSF46785 2 60 3.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 SUPERFAMILY SSF52540 1 152 3.01E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 PIRSF PIRSF005052 1 283 3.1E-108 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 PANTHER PTHR30448:SF0 1 280 2.5E-140 T 22-04-2016 SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.395 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 Gene3D G3DSA:3.40.50.300 1 152 4.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 Pfam PF03668 P-loop ATPase protein family 1 280 3.3E-106 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SAMA_RS16125 d4e1ac79903f310a47a1733e41702b62 283 PANTHER PTHR30448 1 280 2.5E-140 T 22-04-2016 SAMA_RS02510 93e8921151192607d1a1607600d39f6a 309 PANTHER PTHR34138:SF1 1 269 5.1E-79 T 22-04-2016 SAMA_RS02510 93e8921151192607d1a1607600d39f6a 309 PANTHER PTHR34138 1 269 5.1E-79 T 22-04-2016 SAMA_RS02510 93e8921151192607d1a1607600d39f6a 309 PIRSF PIRSF038471 2 279 9.4E-75 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SAMA_RS02510 93e8921151192607d1a1607600d39f6a 309 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 1.4E-79 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SAMA_RS02510 93e8921151192607d1a1607600d39f6a 309 Pfam PF04085 rod shape-determining protein MreC 120 266 3.2E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 Gene3D G3DSA:3.40.50.300 6 179 6.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 Gene3D G3DSA:3.40.50.300 877 1015 6.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 Gene3D G3DSA:3.40.50.300 625 626 6.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 Pfam PF13476 AAA domain 6 217 7.9E-22 T 22-04-2016 SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 Pfam PF13558 Putative exonuclease SbcCD, C subunit 917 977 6.3E-11 T 22-04-2016 SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 PANTHER PTHR32114:SF2 2 1020 6.1E-121 T 22-04-2016 SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 PANTHER PTHR32114 2 1020 6.1E-121 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 SUPERFAMILY SSF52540 866 1009 2.72E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 SUPERFAMILY SSF52540 1 186 2.72E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06640 3e717579f7e6ebdabf5c0200632da36c 1020 SUPERFAMILY SSF52540 602 644 2.72E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PANTHER PTHR11071:SF78 29 181 4.3E-34 T 22-04-2016 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PANTHER PTHR11071 29 181 4.3E-34 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 Gene3D G3DSA:2.40.100.10 31 184 5.2E-39 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 SUPERFAMILY SSF50891 33 185 9.35E-40 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 6.3E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 6.3E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 6.3E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 6.3E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS14140 cfb7f144eb6d4967cf4a562718468baa 187 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 161 1.7E-37 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946:SF11 286 878 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946:SF11 897 937 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Gene3D G3DSA:1.10.730.10 645 792 1.9E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Pfam PF08264 Anticodon-binding domain of tRNA 688 843 5.2E-28 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946 286 878 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PANTHER PTHR11946 897 937 0.0 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 1.7E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 404 419 1.7E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.7E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 1.7E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.7E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 SUPERFAMILY SSF47323 655 931 8.6E-77 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 SUPERFAMILY SSF50677 204 406 1.47E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Gene3D G3DSA:3.40.50.620 406 639 1.8E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Gene3D G3DSA:3.40.50.620 17 205 1.8E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 931 21.536 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 644 3.1E-228 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Pfam PF06827 Zinc finger found in FPG and IleRS 902 928 1.8E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 SUPERFAMILY SSF52374 3 202 4.56E-134 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 SUPERFAMILY SSF52374 406 651 4.56E-134 T 22-04-2016 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 846 1.8E-296 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SAMA_RS04825 e4e14127fdc0fa17891699781d56fd2e 940 Gene3D G3DSA:3.90.740.10 206 392 6.3E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 1051 1068 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 183 2.2E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069:SF7 364 754 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069:SF7 38 296 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069:SF7 794 894 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.40.170.20 575 725 1.2E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.40.170.20 375 410 1.2E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.40.170.20 462 530 1.2E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.40.170.20 184 255 1.2E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.40.170.20 791 1068 1.2E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069 364 754 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069 38 296 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 PANTHER PTHR30069 794 894 7.1E-50 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 790 837 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 869 971 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 449 508 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 53 241 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 564 712 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 374 414 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 SUPERFAMILY SSF56935 1001 1068 5.19E-68 T 22-04-2016 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Pfam PF00593 TonB dependent receptor 681 1065 5.3E-17 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS10570 1e3b8a1dd3a64148715ae48fb0298164 1068 Gene3D G3DSA:2.170.130.10 53 183 2.5E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 Gene3D G3DSA:1.20.200.10 197 494 1.6E-113 T 22-04-2016 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 8 495 1.3E-179 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 PANTHER PTHR10362:SF7 8 493 1.9E-208 T 22-04-2016 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 SUPERFAMILY SSF48557 7 494 1.1E-176 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 PANTHER PTHR10362 8 493 1.9E-208 T 22-04-2016 SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 Gene3D G3DSA:1.10.275.10 6 196 1.7E-66 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS08520 a6ab32c671888b72d2b86ef285bb2bd1 497 Pfam PF00221 Aromatic amino acid lyase 10 467 6.8E-178 T 22-04-2016 IPR001106 Aromatic amino acid lyase SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 72 95 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 SUPERFAMILY SSF63411 485 712 2.1E-33 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 PANTHER PTHR11851 11 843 5.7E-194 T 22-04-2016 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Pfam PF00675 Insulinase (Peptidase family M16) 52 197 4.9E-18 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Gene3D G3DSA:3.30.830.10 727 907 1.6E-23 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Gene3D G3DSA:3.30.830.10 292 442 1.4E-17 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Gene3D G3DSA:3.30.830.10 496 688 2.9E-27 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 SUPERFAMILY SSF63411 40 252 4.54E-52 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Gene3D G3DSA:3.30.830.10 41 253 3.2E-51 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 SUPERFAMILY SSF63411 267 451 1.59E-29 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 SUPERFAMILY SSF63411 736 911 4.0E-31 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 PANTHER PTHR11851:SF136 11 843 5.7E-194 T 22-04-2016 SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Pfam PF05193 Peptidase M16 inactive domain 660 841 3.7E-29 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS18685 a1c56421bd14fb50932029b945b5fb8c 912 Pfam PF05193 Peptidase M16 inactive domain 205 382 6.1E-28 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 Pfam PF13437 HlyD family secretion protein 239 325 3.9E-11 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 SUPERFAMILY SSF51230 51 110 3.4E-5 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 Gene3D G3DSA:2.40.50.100 92 111 7.4E-8 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 Gene3D G3DSA:2.40.50.100 236 269 7.4E-8 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 PANTHER PTHR32347 1 418 1.9E-77 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 SUPERFAMILY SSF111369 161 329 1.29E-5 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 Pfam PF13533 Biotin-lipoyl like 90 125 6.4E-6 T 22-04-2016 SAMA_RS14960 6c86cdf3f6c9c6924a39a6132cf6b578 418 PANTHER PTHR32347:SF16 1 418 1.9E-77 T 22-04-2016 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 Pfam PF03466 LysR substrate binding domain 96 290 8.5E-17 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 SUPERFAMILY SSF46785 9 116 1.94E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 PANTHER PTHR30537 3 290 3.4E-39 T 22-04-2016 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.4E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 Gene3D G3DSA:1.10.10.10 10 92 2.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 Gene3D G3DSA:3.40.190.10 99 192 7.5E-9 T 22-04-2016 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 SUPERFAMILY SSF53850 96 292 5.25E-22 T 22-04-2016 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 7.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 7.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 7.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS00805 00ba3ab78d4e11d7c20e5a589b6a9f53 306 PANTHER PTHR30537:SF3 3 290 3.4E-39 T 22-04-2016 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 Gene3D G3DSA:3.40.50.300 12 238 8.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 PANTHER PTHR24220 300 307 1.5E-98 T 22-04-2016 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 PANTHER PTHR24220 18 238 1.5E-98 T 22-04-2016 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 Pfam PF00005 ABC transporter 33 176 7.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 PANTHER PTHR24220:SF0 300 307 1.5E-98 T 22-04-2016 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 PANTHER PTHR24220:SF0 18 238 1.5E-98 T 22-04-2016 SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 SMART SM00382 41 248 7.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 SUPERFAMILY SSF52540 12 238 9.99E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18640 8ed17d0b10b45cce486c4b2a08d15166 322 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 SMART SM00240 23 73 1.7E-5 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 PANTHER PTHR30258:SF3 156 578 1.4E-121 T 22-04-2016 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 SUPERFAMILY SSF49879 6 98 5.72E-17 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 Gene3D G3DSA:2.60.200.20 5 95 2.2E-13 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 Pfam PF00437 Type II/IV secretion system protein 236 512 7.2E-84 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 Gene3D G3DSA:3.40.50.300 338 554 5.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 Gene3D G3DSA:3.30.450.90 233 330 4.3E-34 T 22-04-2016 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 SUPERFAMILY SSF52540 223 550 2.84E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 PANTHER PTHR30258 156 578 1.4E-121 T 22-04-2016 SAMA_RS03730 a3643ca51e71495bfa6a45c94e11c90e 589 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 16 96 5.4E-10 T 22-04-2016 IPR032030 YscD, cytoplasmic domain SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 Gene3D G3DSA:3.30.420.40 170 237 3.1E-8 T 22-04-2016 SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 Gene3D G3DSA:3.30.420.40 124 169 1.5E-11 T 22-04-2016 SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 Gene3D G3DSA:3.30.420.40 3 123 1.0E-8 T 22-04-2016 SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 Pfam PF00480 ROK family 35 217 5.3E-14 T 22-04-2016 IPR000600 ROK family SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 SUPERFAMILY SSF53067 1 253 1.54E-24 T 22-04-2016 SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 PANTHER PTHR18964:SF128 95 212 3.0E-12 T 22-04-2016 SAMA_RS03620 b4c524febf7c5933c18dcd3e1503b65f 262 PANTHER PTHR18964 95 212 3.0E-12 T 22-04-2016 SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 Gene3D G3DSA:3.60.21.10 20 165 3.1E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 Gene3D G3DSA:3.60.21.10 203 255 3.1E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 PANTHER PTHR34990 6 282 1.9E-95 T 22-04-2016 SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 PANTHER PTHR34990:SF2 6 282 1.9E-95 T 22-04-2016 SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 21 235 1.3E-10 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 SUPERFAMILY SSF56300 196 264 5.22E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS05180 3cec197d3df6a9eab10f39c237dfca87 282 SUPERFAMILY SSF56300 20 137 5.22E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 236 1.8E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF49452 30 113 3.53E-11 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Gene3D G3DSA:2.40.170.20 240 498 6.6E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Gene3D G3DSA:2.40.170.20 532 614 6.6E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Gene3D G3DSA:2.40.170.20 652 972 6.6E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Pfam PF13620 Carboxypeptidase regulatory-like domain 35 114 3.5E-17 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Gene3D G3DSA:2.170.130.10 119 239 6.8E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF56935 896 972 2.78E-68 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF56935 119 256 2.78E-68 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF56935 752 867 2.78E-68 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF56935 661 705 2.78E-68 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 SUPERFAMILY SSF56935 291 611 2.78E-68 T 22-04-2016 SAMA_RS15975 703fb52274436d46edd078ff556a0ed4 972 Gene3D G3DSA:2.60.40.1120 36 108 2.5E-12 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SAMA_RS06570 161fb5473489c0a61d6604a11043ac20 260 PIRSF PIRSF028069 8 260 2.0E-94 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 SAMA_RS06570 161fb5473489c0a61d6604a11043ac20 260 Pfam PF11932 Protein of unknown function (DUF3450) 13 253 6.4E-89 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 249 6.7E-20 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 PANTHER PTHR30469 27 330 9.9E-73 T 22-04-2016 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 SUPERFAMILY SSF111369 38 263 2.62E-24 T 22-04-2016 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 321 6.0E-53 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 Gene3D G3DSA:2.40.50.100 155 184 1.1E-15 T 22-04-2016 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 Gene3D G3DSA:2.40.50.100 48 80 1.1E-15 T 22-04-2016 SAMA_RS11390 24617afff7768d494a994ff47a29355c 331 PANTHER PTHR30469:SF15 27 330 9.9E-73 T 22-04-2016 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 Gene3D G3DSA:3.40.470.10 2 218 6.8E-94 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 PANTHER PTHR11264:SF10 3 218 2.9E-130 T 22-04-2016 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 Pfam PF03167 Uracil DNA glycosylase superfamily 49 204 6.9E-21 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 53 62 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 SUPERFAMILY SSF52141 2 218 1.46E-89 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 PANTHER PTHR11264 3 218 2.9E-130 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 SMART SM00987 45 206 1.1E-39 T 22-04-2016 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 210 1.1E-82 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 217 37.606 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS06445 37ef547cafba8ce5d44491594ebc8547 218 SMART SM00986 45 206 1.1E-39 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 PANTHER PTHR11751 25 111 9.6E-55 T 22-04-2016 SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 SMART SM00345 27 85 9.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 Pfam PF07729 FCD domain 95 218 1.9E-31 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 2.0E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 SUPERFAMILY SSF46785 20 114 9.64E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 Gene3D G3DSA:1.20.120.530 88 230 9.2E-34 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 SMART SM00895 95 219 4.0E-29 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 PANTHER PTHR11751:SF426 25 111 9.6E-55 T 22-04-2016 SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 Gene3D G3DSA:1.10.10.10 10 86 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17160 a376adb1db60789e944a13bea24fabac 256 SUPERFAMILY SSF48008 90 224 5.23E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PANTHER PTHR10381:SF22 10 202 1.2E-139 T 22-04-2016 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 Pfam PF00574 Clp protease 22 201 4.4E-89 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 SUPERFAMILY SSF52096 20 201 9.39E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 6.3E-106 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PANTHER PTHR10381 10 202 1.2E-139 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 22-04-2016 IPR018215 ClpP, Ser active site SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 5.4E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 5.4E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 5.4E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 5.4E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 5.4E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 43.469 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 22-04-2016 IPR033135 ClpP, histidine active site SAMA_RS06420 c1766ecc5298d7cd6b5a9865a980126c 202 Gene3D G3DSA:3.90.226.10 12 200 9.5E-91 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 Gene3D G3DSA:2.40.170.20 170 322 2.2E-91 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 Gene3D G3DSA:2.40.170.20 355 839 2.2E-91 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 PANTHER PTHR30069 1 768 2.3E-209 T 22-04-2016 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 Gene3D G3DSA:2.170.130.10 52 169 1.8E-38 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 SUPERFAMILY SSF56935 360 839 3.05E-110 T 22-04-2016 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 SUPERFAMILY SSF56935 273 321 3.05E-110 T 22-04-2016 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 SUPERFAMILY SSF56935 37 232 3.05E-110 T 22-04-2016 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 166 4.7E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 Pfam PF00593 TonB dependent receptor 543 838 5.9E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS09625 e2df1ec9dec7dbfc8bcddde178d734c9 839 PANTHER PTHR30069:SF7 1 768 2.3E-209 T 22-04-2016 SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 PANTHER PTHR23416:SF69 50 225 8.1E-60 T 22-04-2016 SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 Gene3D G3DSA:2.160.10.10 31 224 2.8E-54 T 22-04-2016 SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 PANTHER PTHR23416 50 225 8.1E-60 T 22-04-2016 SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 1.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS07215 255e881d09f2fdcab8e613ff9fe1ad08 226 SUPERFAMILY SSF51161 33 221 6.93E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 SMART SM00382 154 367 3.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Gene3D G3DSA:3.40.50.300 118 286 9.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 366 434 3.4E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 456 34.545 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Gene3D G3DSA:1.10.1750.10 356 456 1.2E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 455 9.7E-188 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Pfam PF00308 Bacterial dnaA protein 123 339 1.3E-97 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PANTHER PTHR30050:SF2 1 101 8.1E-245 T 22-04-2016 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PANTHER PTHR30050:SF2 120 457 8.1E-245 T 22-04-2016 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Gene3D G3DSA:1.10.8.60 288 355 1.9E-31 T 22-04-2016 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PANTHER PTHR30050 120 457 8.1E-245 T 22-04-2016 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 415 434 5.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 253 280 5.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 187 201 5.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 219 233 5.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 155 175 5.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 ProSitePatterns PS01008 DnaA protein signature. 415 434 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 PANTHER PTHR30050 1 101 8.1E-245 T 22-04-2016 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 SUPERFAMILY SSF48295 353 456 1.26E-36 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 SUPERFAMILY SSF52540 122 333 1.07E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 SMART SM00760 365 434 8.1E-44 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SAMA_RS00055 31ffe45ae3886b393d91603a1fc24e0d 457 Pfam PF11638 DnaA N-terminal domain 4 64 4.7E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 554 5.7E-111 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 PANTHER PTHR32060 1 608 1.0E-301 T 22-04-2016 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Gene3D G3DSA:3.30.750.44 195 251 8.3E-4 T 22-04-2016 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 539 670 3.1E-37 T 22-04-2016 IPR020992 Tail specific protease, C-terminal SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 SUPERFAMILY SSF50156 217 342 5.91E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 238 320 3.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 SMART SM00228 246 323 6.8E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Pfam PF03572 Peptidase family S41 363 532 2.6E-51 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 SMART SM00245 328 534 4.7E-65 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Gene3D G3DSA:2.30.42.10 252 336 2.0E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 Gene3D G3DSA:3.90.226.10 337 536 1.8E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 PANTHER PTHR32060:SF11 1 608 1.0E-301 T 22-04-2016 SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 SUPERFAMILY SSF52096 357 539 4.64E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08255 68080be519cbfe27731f659350c5426f 681 SUPERFAMILY SSF52096 166 264 4.64E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 Pfam PF13353 4Fe-4S single cluster domain 12 151 5.2E-49 T 22-04-2016 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 SUPERFAMILY SSF102114 24 126 4.19E-9 T 22-04-2016 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 PANTHER PTHR30352 1 150 1.9E-62 T 22-04-2016 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 Gene3D G3DSA:3.20.20.70 17 139 4.0E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 PANTHER PTHR30352:SF2 1 150 1.9E-62 T 22-04-2016 SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 151 1.2E-57 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SAMA_RS06685 a861f6a3853fe7037016701caccd6860 165 PIRSF PIRSF000368 1 157 1.4E-54 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 SUPERFAMILY SSF52821 4 67 1.37E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 SUPERFAMILY SSF52821 95 135 1.37E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 4 365 53.05 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 PANTHER PTHR30401:SF0 1 365 1.6E-177 T 22-04-2016 SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 Gene3D G3DSA:3.40.250.10 7 132 7.1E-32 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 18 350 2.0E-105 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 PANTHER PTHR30401 1 365 1.6E-177 T 22-04-2016 SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 SMART SM00450 5 135 1.2E-10 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00955 ed7e2c22c6f20023df84ab27bcf7b89a 367 SUPERFAMILY SSF52540 146 262 3.28E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Pfam PF12833 Helix-turn-helix domain 148 226 4.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SMART SM01009 236 355 1.1E-41 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:1.10.10.60 180 234 2.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 PANTHER PTHR10242 92 283 6.7E-33 T 22-04-2016 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 PANTHER PTHR10242 305 508 6.7E-33 T 22-04-2016 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Pfam PF06029 AlkA N-terminal domain 236 354 8.7E-25 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:1.10.340.30 357 461 2.9E-21 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SUPERFAMILY SSF55945 236 337 3.3E-24 T 22-04-2016 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SMART SM00478 365 509 0.0025 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:1.10.10.60 145 179 1.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:1.10.1670.10 463 507 9.2E-4 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SUPERFAMILY SSF48150 347 507 9.58E-26 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:3.30.310.20 237 352 4.6E-21 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Gene3D G3DSA:3.40.10.10 31 115 2.5E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 Pfam PF02805 Metal binding domain of Ada 37 100 8.5E-27 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 179 221 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SMART SM00342 142 225 5.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SUPERFAMILY SSF46689 178 227 1.03E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 SUPERFAMILY SSF57884 30 116 1.7E-31 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 PANTHER PTHR10242:SF3 92 283 6.7E-33 T 22-04-2016 SAMA_RS11510 00ec58d5756b1b9876a2565557d77534 509 PANTHER PTHR10242:SF3 305 508 6.7E-33 T 22-04-2016 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 PANTHER PTHR21621:SF0 1 288 1.5E-126 T 22-04-2016 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 Gene3D G3DSA:3.40.50.20 10 102 2.1E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 Gene3D G3DSA:3.30.470.20 172 276 2.6E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.5E-66 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 Gene3D G3DSA:3.30.1490.20 103 171 5.6E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.4E-84 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 SUPERFAMILY SSF56059 98 288 8.13E-49 T 22-04-2016 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 PANTHER PTHR21621 1 288 1.5E-126 T 22-04-2016 SAMA_RS06800 e6194ed3f6df4e7e0b334c705a5f794f 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.488 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 Gene3D G3DSA:2.40.128.110 21 189 7.8E-54 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 PANTHER PTHR34406:SF1 1 189 8.5E-55 T 22-04-2016 SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 Pfam PF04264 YceI-like domain 24 185 1.2E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 SMART SM00867 23 188 2.2E-64 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 SUPERFAMILY SSF101874 21 189 1.7E-51 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SAMA_RS04965 687a934f3c231ef2b444023de89c0bf5 190 PANTHER PTHR34406 1 189 8.5E-55 T 22-04-2016 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 739 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 PIRSF PIRSF009407 1 741 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 PANTHER PTHR36999 2 739 0.0 T 22-04-2016 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 Gene3D G3DSA:3.40.718.10 152 289 6.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 Gene3D G3DSA:3.40.718.10 341 364 6.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 Gene3D G3DSA:3.40.718.10 540 647 6.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 739 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SAMA_RS10735 ef64367c1a4765e996560f4131d079c9 741 SUPERFAMILY SSF53659 5 739 0.0 T 22-04-2016 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.0E-49 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Gene3D G3DSA:1.10.540.10 1 118 1.1E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 2.8E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 PANTHER PTHR10909 1 379 2.8E-194 T 22-04-2016 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Gene3D G3DSA:1.20.140.10 217 380 4.2E-69 T 22-04-2016 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Gene3D G3DSA:2.40.110.10 121 216 5.1E-40 T 22-04-2016 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 SUPERFAMILY SSF47203 225 380 3.22E-60 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.4E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 PANTHER PTHR10909:SF305 1 379 2.8E-194 T 22-04-2016 SAMA_RS07180 653bc5ce47edfbcdccec9eaabb897faf 385 SUPERFAMILY SSF56645 1 240 4.19E-79 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 Gene3D G3DSA:3.40.718.10 4 327 5.7E-132 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 35.734 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 320 1.7E-105 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 325 3.1E-126 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 PANTHER PTHR30004:SF5 1 329 8.6E-215 T 22-04-2016 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 PANTHER PTHR30004 1 329 8.6E-215 T 22-04-2016 SAMA_RS14725 08270c323d644329d35ca2ed3d3d98c7 329 SUPERFAMILY SSF53659 4 327 5.44E-115 T 22-04-2016 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 208 5.3E-72 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 197 5.9E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 Gene3D G3DSA:3.40.50.1000 2 223 2.5E-21 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 PANTHER PTHR20371 1 225 5.0E-96 T 22-04-2016 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 9.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 9.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 9.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 9.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 223 37.842 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 SAMA_RS00375 600a9d9fb258d9c6bccb648e2b2d0635 226 SUPERFAMILY SSF56784 1 223 9.75E-57 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS06930 e5e488f28fccc67c55ac5f0f53ba743e 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.0E-51 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SAMA_RS06930 e5e488f28fccc67c55ac5f0f53ba743e 180 PANTHER PTHR35602 1 178 2.3E-102 T 22-04-2016 SAMA_RS06930 e5e488f28fccc67c55ac5f0f53ba743e 180 SUPERFAMILY SSF53474 2 146 1.11E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS06930 e5e488f28fccc67c55ac5f0f53ba743e 180 PANTHER PTHR35602:SF2 1 178 2.3E-102 T 22-04-2016 SAMA_RS06930 e5e488f28fccc67c55ac5f0f53ba743e 180 Gene3D G3DSA:3.40.50.1820 2 144 1.4E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03360 bca3e7194cdd25f1b2f3b4c573699aa9 127 Pfam PF11456 Protein of unknown function (DUF3019) 25 126 5.5E-24 T 22-04-2016 IPR021559 Protein of unknown function DUF3019 SAMA_RS15860 738a6578534557fda0cbcf8e6468a706 240 Gene3D G3DSA:3.20.20.190 1 228 8.2E-58 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SAMA_RS15860 738a6578534557fda0cbcf8e6468a706 240 SUPERFAMILY SSF51695 1 227 1.2E-57 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SAMA_RS15860 738a6578534557fda0cbcf8e6468a706 240 PANTHER PTHR23344 1 225 9.7E-60 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SAMA_RS15860 738a6578534557fda0cbcf8e6468a706 240 PANTHER PTHR23344:SF25 1 225 9.7E-60 T 22-04-2016 SAMA_RS15860 738a6578534557fda0cbcf8e6468a706 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 221 2.9E-30 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 Pfam PF13437 HlyD family secretion protein 158 265 3.0E-9 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 Gene3D G3DSA:2.40.50.100 64 94 3.9E-17 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 Gene3D G3DSA:2.40.50.100 155 186 3.9E-17 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 PANTHER PTHR30469:SF10 31 353 6.0E-72 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 Pfam PF13533 Biotin-lipoyl like 65 107 1.2E-10 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 PANTHER PTHR30469 31 353 6.0E-72 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 344 2.7E-63 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 Gene3D G3DSA:1.20.1600.10 97 154 9.5E-4 T 22-04-2016 SAMA_RS03555 08f1e30d52f1da025649fa238851bf62 354 SUPERFAMILY SSF111369 52 273 1.2E-33 T 22-04-2016 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 6 397 2.8E-211 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 SUPERFAMILY SSF53383 6 395 5.19E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 3 395 53.577 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 Gene3D G3DSA:3.40.640.10 58 278 1.5E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 Gene3D G3DSA:3.90.1150.10 279 394 3.2E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 PANTHER PTHR13693:SF60 8 397 1.3E-263 T 22-04-2016 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 Pfam PF00155 Aminotransferase class I and II 43 387 3.5E-74 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SAMA_RS00495 df51233882d0a61171363983a4bd2c65 397 PANTHER PTHR13693 8 397 1.3E-263 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 SMART SM00487 149 340 3.5E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Gene3D G3DSA:3.40.50.300 484 632 2.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 SUPERFAMILY SSF52540 481 652 2.99E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 SUPERFAMILY SSF52540 271 335 2.99E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Pfam PF00271 Helicase conserved C-terminal domain 493 602 6.1E-13 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 SMART SM00490 518 602 1.4E-12 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799 798 839 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799 401 693 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799 1 9 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799 149 352 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799 883 959 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799:SF610 798 839 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799:SF610 401 693 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799:SF610 1 9 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799:SF610 149 352 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 PANTHER PTHR10799:SF610 883 959 1.8E-260 T 22-04-2016 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Gene3D G3DSA:3.40.50.300 159 317 1.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Pfam PF00176 SNF2 family N-terminal domain 173 342 1.3E-15 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 965 69.682 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 Pfam PF12137 RNA polymerase recycling family C-terminal 606 963 1.6E-141 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 SAMA_RS16330 ea5b9a5ee9aa65e53b1dd00d0cda49c2 967 SUPERFAMILY SSF52540 133 376 1.09E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 PANTHER PTHR13847:SF196 1 402 1.5E-66 T 22-04-2016 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 SUPERFAMILY SSF51905 39 332 9.21E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 PANTHER PTHR13847 1 402 1.5E-66 T 22-04-2016 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Gene3D G3DSA:3.30.9.10 267 359 6.4E-4 T 22-04-2016 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Gene3D G3DSA:3.30.9.10 136 188 6.4E-4 T 22-04-2016 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Pfam PF01266 FAD dependent oxidoreductase 40 396 2.6E-42 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Gene3D G3DSA:3.50.50.60 29 131 5.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Gene3D G3DSA:3.50.50.60 189 266 5.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12835 ab841a82292c5ec6fe06b1278cf6fe2a 442 Gene3D G3DSA:3.50.50.60 363 406 5.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 368 3.1E-147 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 SUPERFAMILY SSF53067 66 111 2.78E-25 T 22-04-2016 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 SUPERFAMILY SSF53067 143 342 2.78E-25 T 22-04-2016 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 SUPERFAMILY SSF53067 5 39 2.78E-25 T 22-04-2016 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 368 41.924 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 PANTHER PTHR30605 1 364 7.4E-167 T 22-04-2016 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 Gene3D G3DSA:3.30.420.40 5 197 2.8E-73 T 22-04-2016 SAMA_RS04440 b9001d0ef99acd32c70766e5d7b92fc6 369 PANTHER PTHR30605:SF0 1 364 7.4E-167 T 22-04-2016 SAMA_RS02725 bb01d43c6283b1f43b87563435d9b429 301 PANTHER PTHR10491 1 298 6.0E-113 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SAMA_RS02725 bb01d43c6283b1f43b87563435d9b429 301 PANTHER PTHR10491:SF4 1 298 6.0E-113 T 22-04-2016 SAMA_RS02725 bb01d43c6283b1f43b87563435d9b429 301 SUPERFAMILY SSF51735 1 281 4.45E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02725 bb01d43c6283b1f43b87563435d9b429 301 Pfam PF04321 RmlD substrate binding domain 3 291 1.2E-69 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SAMA_RS02725 bb01d43c6283b1f43b87563435d9b429 301 Gene3D G3DSA:3.40.50.720 3 242 6.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.3E-15 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.3E-15 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.3E-15 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PANTHER PTHR34040 1 89 4.5E-37 T 22-04-2016 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-28 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.0E-27 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PANTHER PTHR34040:SF2 1 89 4.5E-37 T 22-04-2016 SAMA_RS11970 3bacf050460f219933e12d2db8c4e918 89 PIRSF PIRSF004669 1 89 2.9E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SAMA_RS19230 4df8d425fb70fb30443d9ac577facd06 211 Gene3D G3DSA:3.40.50.150 13 189 4.4E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS19230 4df8d425fb70fb30443d9ac577facd06 211 SUPERFAMILY SSF53335 17 193 9.26E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS19230 4df8d425fb70fb30443d9ac577facd06 211 PANTHER PTHR10108 17 151 9.2E-16 T 22-04-2016 SAMA_RS19230 4df8d425fb70fb30443d9ac577facd06 211 Pfam PF13649 Methyltransferase domain 53 144 5.2E-17 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 PANTHER PTHR11632:SF5 2 573 0.0 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 PIRSF PIRSF000171 1 580 1.6E-54 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 SUPERFAMILY SSF56425 236 356 1.09E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Gene3D G3DSA:3.50.50.60 6 242 7.4E-118 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Gene3D G3DSA:3.50.50.60 351 424 7.4E-118 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 7.0E-239 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 SUPERFAMILY SSF46977 451 588 4.58E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 SUPERFAMILY SSF51905 359 436 4.36E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 SUPERFAMILY SSF51905 5 259 4.36E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Gene3D G3DSA:3.90.700.10 243 349 2.1E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Pfam PF00890 FAD binding domain 9 405 4.4E-122 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 7.7E-273 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 PANTHER PTHR11632 2 573 0.0 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Gene3D G3DSA:4.10.80.40 548 588 4.6E-20 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Gene3D G3DSA:1.20.58.100 434 545 1.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 1.8E-5 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.8E-5 T 22-04-2016 SAMA_RS07420 79393eb86d6a1976fbe725b7a40a8bca 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 3.5E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 89 152 9.3E-10 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 SUPERFAMILY SSF56784 16 175 2.0E-44 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 172 3.9E-55 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 PIRSF PIRSF006118 7 182 6.8E-72 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 PANTHER PTHR21485 6 175 1.8E-59 T 22-04-2016 SAMA_RS16090 c06679e1d503181a04fc07cc877c16ed 182 Gene3D G3DSA:3.40.50.1000 13 175 1.8E-45 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 PIRSF PIRSF000232 1 182 7.8E-60 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 PANTHER PTHR23026 1 174 4.8E-77 T 22-04-2016 SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 Pfam PF00881 Nitroreductase family 8 161 4.9E-20 T 22-04-2016 IPR029479 Nitroreductase SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 Gene3D G3DSA:3.40.109.10 3 173 1.4E-34 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 PANTHER PTHR23026:SF107 1 174 4.8E-77 T 22-04-2016 SAMA_RS07585 f4937827e14269b34b97d9202f112df9 182 SUPERFAMILY SSF55469 2 174 2.22E-37 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 Gene3D G3DSA:1.20.1050.10 92 216 4.7E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 SUPERFAMILY SSF52833 1 88 6.36E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 Gene3D G3DSA:3.40.30.10 8 82 1.1E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 SUPERFAMILY SSF47616 79 216 2.11E-41 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 1.4E-64 T 22-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 PANTHER PTHR11260:SF237 1 203 4.1E-30 T 22-04-2016 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 PANTHER PTHR11260 1 203 4.1E-30 T 22-04-2016 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 1.9E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 19 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SAMA_RS13295 a45e1e937d87a7e172dfc5f4b587281c 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 215 5.5E-39 T 22-04-2016 IPR007494 Glutaredoxin 2, C-terminal SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 SUPERFAMILY SSF53067 2 307 4.2E-49 T 22-04-2016 SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 PANTHER PTHR18964:SF134 1 307 7.5E-71 T 22-04-2016 SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 Pfam PF00480 ROK family 3 307 2.1E-53 T 22-04-2016 IPR000600 ROK family SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 Gene3D G3DSA:3.30.420.40 3 143 2.7E-33 T 22-04-2016 SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 ProSitePatterns PS01125 ROK family signature. 141 168 - T 22-04-2016 IPR000600 ROK family SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 PANTHER PTHR18964 1 307 7.5E-71 T 22-04-2016 SAMA_RS06270 92d2dbc49e6618a608d11785bbc9d8a7 307 Gene3D G3DSA:3.30.420.40 144 285 2.6E-35 T 22-04-2016 SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 PANTHER PTHR38471 1 118 9.8E-48 T 22-04-2016 SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 SUPERFAMILY SSF158446 1 109 1.96E-34 T 22-04-2016 SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 109 7.2E-33 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 PANTHER PTHR38471:SF2 1 118 9.8E-48 T 22-04-2016 SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 Pfam PF05635 23S rRNA-intervening sequence protein 4 105 1.3E-31 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS11855 88b1606c29a50b9a5c3be703ee3437ad 128 Gene3D G3DSA:1.20.1440.60 1 109 3.6E-33 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 SMART SM00116 159 206 1.7E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 SMART SM00116 223 270 5.8E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 PANTHER PTHR11911:SF110 149 444 1.2E-38 T 22-04-2016 SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 PANTHER PTHR11911 149 444 1.2E-38 T 22-04-2016 SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 SUPERFAMILY SSF51206 6 136 4.98E-18 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Pfam PF03445 Putative nucleotidyltransferase DUF294 295 431 7.7E-47 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 SUPERFAMILY SSF54631 152 267 5.18E-32 T 22-04-2016 SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Gene3D G3DSA:2.60.120.10 5 138 1.3E-14 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Pfam PF00571 CBS domain 153 205 1.6E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Pfam PF00571 CBS domain 216 267 2.3E-10 T 22-04-2016 IPR000644 CBS domain SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Gene3D G3DSA:3.10.580.10 151 268 3.7E-31 T 22-04-2016 SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 468 611 8.7E-45 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding SAMA_RS07925 50a7243ead602ca6d8e58dfce8a7c84b 615 Pfam PF00027 Cyclic nucleotide-binding domain 54 119 6.5E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SAMA_RS02090 0fa345cf2fc149e0c549cc6e0532f60c 220 SUPERFAMILY SSF53474 26 216 3.24E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02090 0fa345cf2fc149e0c549cc6e0532f60c 220 Gene3D G3DSA:3.40.50.1820 27 144 3.2E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 Gene3D G3DSA:3.30.750.24 414 497 3.0E-10 T 22-04-2016 IPR002645 STAS domain SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 Pfam PF00916 Sulfate permease family 14 374 2.9E-53 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 PANTHER PTHR11814 13 493 1.9E-165 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 SUPERFAMILY SSF52091 413 497 2.75E-12 T 22-04-2016 IPR002645 STAS domain SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 Pfam PF01740 STAS domain 416 497 1.9E-6 T 22-04-2016 IPR002645 STAS domain SAMA_RS10390 1b4eda38396b45bedd6757ef47a6f4f8 518 PANTHER PTHR11814:SF76 13 493 1.9E-165 T 22-04-2016 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 Gene3D G3DSA:3.30.450.20 35 192 1.0E-46 T 22-04-2016 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 SMART SM00304 223 277 1.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 Pfam PF00672 HAMP domain 204 273 1.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 Gene3D G3DSA:1.10.287.950 307 524 2.8E-55 T 22-04-2016 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 552 1.3E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 467 496 9.2E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 9.2E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 313 342 9.2E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 9.2E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PANTHER PTHR32089:SF64 87 554 1.9E-118 T 22-04-2016 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 SMART SM00283 292 553 8.6E-67 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 SMART SM01049 46 140 6.4E-32 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 Pfam PF17200 Single Cache domain 2 51 201 8.4E-39 T 22-04-2016 IPR033480 Single Cache domain 2 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 SUPERFAMILY SSF58104 245 554 5.23E-72 T 22-04-2016 SAMA_RS12180 0b4f6abcf77da216b1479e969f2ebe1f 554 PANTHER PTHR32089 87 554 1.9E-118 T 22-04-2016 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 Gene3D G3DSA:3.30.70.100 173 257 2.0E-29 T 22-04-2016 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 Pfam PF05552 Conserved TM helix 14 55 1.6E-8 T 22-04-2016 IPR008910 Conserved TM helix SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 PANTHER PTHR30221:SF7 1 270 4.9E-113 T 22-04-2016 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 PANTHER PTHR30221 1 270 4.9E-113 T 22-04-2016 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 Pfam PF00924 Mechanosensitive ion channel 66 259 1.6E-57 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 SUPERFAMILY SSF82861 18 103 8.76E-19 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 SUPERFAMILY SSF50182 105 170 1.83E-18 T 22-04-2016 IPR010920 LSM domain SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 SUPERFAMILY SSF82689 172 269 2.48E-33 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SAMA_RS12870 76dbe28153c4ccb3ee1537eacda546b8 275 Gene3D G3DSA:2.30.30.60 120 169 8.1E-21 T 22-04-2016 SAMA_RS14525 45c6e8fa98b73329f025a5a23e8a6769 159 PANTHER PTHR12735 29 159 4.7E-46 T 22-04-2016 SAMA_RS14525 45c6e8fa98b73329f025a5a23e8a6769 159 Pfam PF02657 Fe-S metabolism associated domain 33 152 1.0E-35 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 SAMA_RS14525 45c6e8fa98b73329f025a5a23e8a6769 159 Gene3D G3DSA:3.90.1010.10 21 156 7.0E-42 T 22-04-2016 SAMA_RS14525 45c6e8fa98b73329f025a5a23e8a6769 159 PANTHER PTHR12735:SF26 29 159 4.7E-46 T 22-04-2016 SAMA_RS14525 45c6e8fa98b73329f025a5a23e8a6769 159 SUPERFAMILY SSF82649 18 155 1.83E-42 T 22-04-2016 SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 SUPERFAMILY SSF55282 4 179 1.08E-78 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 PANTHER PTHR11994 1 178 3.5E-96 T 22-04-2016 SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 Gene3D G3DSA:3.30.1440.10 2 179 4.2E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 Pfam PF00281 Ribosomal protein L5 24 80 2.5E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 PIRSF PIRSF002161 1 179 3.1E-65 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.545 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01185 5460771ea525dfa0c08ed6dc580647f4 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.7E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 6 307 1.1E-90 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 Gene3D G3DSA:3.40.190.10 123 264 6.6E-39 T 22-04-2016 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 SUPERFAMILY SSF53850 37 317 7.81E-76 T 22-04-2016 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 PANTHER PTHR30570 39 318 2.3E-177 T 22-04-2016 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 Gene3D G3DSA:3.40.190.10 265 316 3.4E-9 T 22-04-2016 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 Gene3D G3DSA:3.40.190.10 43 120 3.4E-9 T 22-04-2016 SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 Pfam PF12849 PBP superfamily domain 37 293 9.2E-36 T 22-04-2016 IPR024370 PBP domain SAMA_RS05640 7525b209eea5c62433558819c7e72c97 323 PANTHER PTHR30570:SF5 39 318 2.3E-177 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Gene3D G3DSA:3.20.20.60 480 787 3.9E-108 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 SUPERFAMILY SSF56059 2 384 9.18E-109 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 785 2.9E-63 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 PIRSF PIRSF000854 1 789 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 SUPERFAMILY SSF51621 461 787 7.33E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Gene3D G3DSA:3.50.30.10 373 468 8.7E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 PANTHER PTHR22931:SF7 2 266 0.0 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 PANTHER PTHR22931:SF7 282 788 0.0 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 PANTHER PTHR22931 2 266 0.0 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 PANTHER PTHR22931 282 788 0.0 T 22-04-2016 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 1.3E-117 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 SUPERFAMILY SSF52009 346 464 1.14E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Gene3D G3DSA:3.30.470.20 194 354 2.4E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Gene3D G3DSA:3.30.1490.20 2 192 3.7E-69 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS10800 50caa3b090301b376922baa1610960d3 789 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 454 8.2E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS13760 7d7edea60169873aab2b6478453a6560 69 PANTHER PTHR39324 1 67 7.3E-20 T 22-04-2016 SAMA_RS13760 7d7edea60169873aab2b6478453a6560 69 SUPERFAMILY SSF89807 4 67 2.75E-25 T 22-04-2016 IPR009923 Dodecin SAMA_RS13760 7d7edea60169873aab2b6478453a6560 69 Pfam PF07311 Dodecin 4 67 3.1E-29 T 22-04-2016 IPR009923 Dodecin SAMA_RS13760 7d7edea60169873aab2b6478453a6560 69 PANTHER PTHR39324:SF1 1 67 7.3E-20 T 22-04-2016 SAMA_RS13760 7d7edea60169873aab2b6478453a6560 69 Gene3D G3DSA:3.30.1660.10 1 67 3.5E-33 T 22-04-2016 IPR025543 Dodecin-like SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 Gene3D G3DSA:3.40.50.2300 2 120 6.0E-34 T 22-04-2016 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 SMART SM00862 146 221 4.8E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 Gene3D G3DSA:1.10.10.10 125 223 1.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 Pfam PF00072 Response regulator receiver domain 3 111 2.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 SUPERFAMILY SSF52172 2 180 1.12E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 PANTHER PTHR26402:SF578 1 223 1.8E-93 T 22-04-2016 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 SMART SM00448 1 112 1.0E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 4.5E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS18370 55e8611cca3353cdfef0d80d2d5fd053 225 PANTHER PTHR26402 1 223 1.8E-93 T 22-04-2016 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 9.5E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 SUPERFAMILY SSF51735 102 298 2.85E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 PANTHER PTHR10996:SF161 1 328 1.4E-163 T 22-04-2016 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 SUPERFAMILY SSF52283 2 135 9.83E-42 T 22-04-2016 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 Gene3D G3DSA:3.40.50.720 138 304 1.6E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 PANTHER PTHR10996 1 328 1.4E-163 T 22-04-2016 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 Gene3D G3DSA:3.40.50.720 1 137 8.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SAMA_RS03255 2599724b9b6f4082fd54956d0ed786ac 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 327 2.7E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 SMART SM00267 463 639 1.9E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 PANTHER PTHR10799 507 635 3.0E-15 T 22-04-2016 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 PANTHER PTHR10799 1 62 3.0E-15 T 22-04-2016 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 PANTHER PTHR10799:SF710 507 635 3.0E-15 T 22-04-2016 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 SUPERFAMILY SSF55073 479 637 2.82E-39 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 Gene3D G3DSA:3.30.70.270 476 638 2.6E-44 T 22-04-2016 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 PANTHER PTHR10799:SF710 1 62 3.0E-15 T 22-04-2016 SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 475 635 9.3E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19255 2109f730be1a948fcfc48d0ee0774e1a 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 470 637 6.5E-40 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 Pfam PF01966 HD domain 188 316 3.4E-16 T 22-04-2016 IPR006674 HD domain SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 Gene3D G3DSA:3.30.450.40 11 151 1.8E-9 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 Gene3D G3DSA:1.10.3210.10 184 339 2.3E-17 T 22-04-2016 IPR006674 HD domain SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 SMART SM00471 178 326 3.3E-7 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 SUPERFAMILY SSF109604 175 341 9.99E-30 T 22-04-2016 SAMA_RS17670 0b6c6b5d9b465fda711f5d665ed20222 371 SUPERFAMILY SSF55781 18 153 5.4E-11 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.40.50.300 743 879 2.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.40.50.300 465 596 2.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 7 1217 2.2E-278 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.90.320.10 913 1221 2.2E-90 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 450 7.4E-52 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 SUPERFAMILY SSF52540 113 197 1.48E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 SUPERFAMILY SSF52540 322 837 1.48E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 SUPERFAMILY SSF52540 9 75 1.48E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 SUPERFAMILY SSF52980 921 1219 1.18E-77 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070 113 210 5.2E-286 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070 531 790 5.2E-286 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070 297 498 5.2E-286 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070 810 1213 5.2E-286 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070 7 84 5.2E-286 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1218 14.232 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.40.50.300 115 145 1.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.40.50.300 348 464 1.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:3.40.50.300 10 77 1.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Pfam PF13361 UvrD-like helicase C-terminal domain 456 825 2.9E-16 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:1.10.3170.10 150 346 1.2E-37 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Gene3D G3DSA:1.10.486.10 598 742 4.8E-52 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 Pfam PF12705 PD-(D/E)XK nuclease superfamily 996 1194 2.4E-6 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070:SF23 113 210 5.2E-286 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070:SF23 531 790 5.2E-286 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070:SF23 297 498 5.2E-286 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070:SF23 810 1213 5.2E-286 T 22-04-2016 SAMA_RS09950 1104a610a24d96b54d00472d91a276e4 1224 PANTHER PTHR11070:SF23 7 84 5.2E-286 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SUPERFAMILY SSF63829 440 595 1.96E-7 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SMART SM00387 987 1118 5.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SUPERFAMILY SSF63829 113 360 1.7E-18 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 988 1117 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PANTHER PTHR24423 871 1116 5.8E-45 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PANTHER PTHR24423 188 193 5.8E-45 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Gene3D G3DSA:3.30.565.10 939 1119 2.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PANTHER PTHR24423:SF531 871 1116 5.8E-45 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PANTHER PTHR24423:SF531 188 193 5.8E-45 T 22-04-2016 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1039 1053 4.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1078 1096 4.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Pfam PF00512 His Kinase A (phospho-acceptor) domain 873 935 4.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SMART SM00388 872 936 9.5E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Pfam PF07495 Y_Y_Y domain 755 806 1.6E-11 T 22-04-2016 IPR011123 Two component regulator three Y SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Gene3D G3DSA:2.120.10.30 440 541 9.7E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Gene3D G3DSA:2.120.10.30 113 221 2.3E-12 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Gene3D G3DSA:2.120.10.30 269 358 2.3E-12 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SUPERFAMILY SSF55874 926 1116 4.85E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 SUPERFAMILY SSF47384 862 933 8.44E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Pfam PF07494 Two component regulator propeller 522 540 0.0048 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS05785 2711f791d27e5813c81ff6c1427036b3 1141 Gene3D G3DSA:1.10.287.130 864 931 4.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 PANTHER PTHR30438:SF1 1 321 1.4E-112 T 22-04-2016 SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 SUPERFAMILY SSF111369 35 96 1.31E-7 T 22-04-2016 SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 PANTHER PTHR30438 1 321 1.4E-112 T 22-04-2016 SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 39 266 1.2E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 Gene3D G3DSA:2.40.50.100 40 73 1.6E-12 T 22-04-2016 SAMA_RS02565 f1764389710f95983ada9cc9f8589218 322 Gene3D G3DSA:2.40.50.100 197 233 1.6E-12 T 22-04-2016 SAMA_RS17245 40628fbae90de8e00bafbc82832fe1ef 201 PANTHER PTHR34387 1 198 3.1E-31 T 22-04-2016 SAMA_RS17245 40628fbae90de8e00bafbc82832fe1ef 201 Pfam PF04402 Protein of unknown function (DUF541) 2 195 1.2E-29 T 22-04-2016 IPR007497 Protein of unknown function DUF541 SAMA_RS17245 40628fbae90de8e00bafbc82832fe1ef 201 PANTHER PTHR34387:SF1 1 198 3.1E-31 T 22-04-2016 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 SUPERFAMILY SSF52304 9 149 8.11E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 71.715 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 23 151 2.0E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 13 30 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 PANTHER PTHR21272 5 148 2.7E-85 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 PIRSF PIRSF001399 6 150 9.7E-57 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 9 146 6.9E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 Gene3D G3DSA:3.40.50.9100 8 148 5.1E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS16640 7c5bbdce041b8f1e5f96ed603368ce67 151 Pfam PF01220 Dehydroquinase class II 9 143 1.4E-58 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SAMA_RS00090 310c0b57df7017122a9a7da2eb2edb5a 246 PANTHER PTHR41293 5 245 4.6E-85 T 22-04-2016 SAMA_RS00090 310c0b57df7017122a9a7da2eb2edb5a 246 Pfam PF06149 Protein of unknown function (DUF969) 10 224 8.5E-86 T 22-04-2016 IPR010374 Protein of unknown function DUF969 SAMA_RS00090 310c0b57df7017122a9a7da2eb2edb5a 246 PANTHER PTHR41293:SF1 5 245 4.6E-85 T 22-04-2016 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Gene3D G3DSA:3.90.550.10 1 242 4.5E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Gene3D G3DSA:2.160.10.10 243 320 6.3E-17 T 22-04-2016 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.027 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 PANTHER PTHR22572 4 446 8.0E-220 T 22-04-2016 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 PANTHER PTHR22572:SF115 4 446 8.0E-220 T 22-04-2016 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 350 379 0.0017 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 295 3.8E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Pfam PF12804 MobA-like NTP transferase domain 5 129 7.5E-25 T 22-04-2016 IPR025877 MobA-like NTP transferase SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 7.8E-191 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 Gene3D G3DSA:2.160.10.10 321 451 4.3E-32 T 22-04-2016 SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 SUPERFAMILY SSF53448 1 248 5.84E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS18935 69e2d4b96c94cdf9ce74af8de0a237ad 454 SUPERFAMILY SSF51161 252 434 1.94E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 Gene3D G3DSA:3.50.30.40 1 157 1.6E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.8E-83 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 PANTHER PTHR33254:SF7 1 161 1.3E-99 T 22-04-2016 SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 PANTHER PTHR33254 1 161 1.3E-99 T 22-04-2016 SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 5.9E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.681 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 SUPERFAMILY SSF89562 2 159 2.49E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS16670 56db83094834bdcc869a58cd40a68268 161 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 6.6E-37 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Pfam PF16448 LapD/MoxY periplasmic domain 24 146 1.2E-36 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 SMART SM00267 226 394 2.3E-7 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 SMART SM00304 172 224 1.1E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 SUPERFAMILY SSF55073 243 390 5.49E-17 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 SMART SM00052 402 639 3.3E-10 T 22-04-2016 IPR001633 EAL domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 SUPERFAMILY SSF141868 409 632 1.14E-40 T 22-04-2016 IPR001633 EAL domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Gene3D G3DSA:3.30.70.270 239 397 7.3E-18 T 22-04-2016 SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 PANTHER PTHR33121 397 632 1.8E-24 T 22-04-2016 SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 PANTHER PTHR33121:SF10 397 632 1.8E-24 T 22-04-2016 SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 388 1.2E-12 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Pfam PF00672 HAMP domain 153 220 4.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Gene3D G3DSA:3.20.20.450 405 636 4.3E-36 T 22-04-2016 IPR001633 EAL domain SAMA_RS16990 b9d381a7792ac8c55e48356981d047f4 639 Pfam PF00563 EAL domain 408 632 9.1E-46 T 22-04-2016 IPR001633 EAL domain SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 Gene3D G3DSA:3.40.640.10 46 316 3.3E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.7E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.7E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.7E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.7E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PANTHER PTHR11879:SF11 1 396 1.3E-249 T 22-04-2016 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 Pfam PF00155 Aminotransferase class I and II 27 393 1.1E-86 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 SUPERFAMILY SSF53383 2 396 1.26E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS09410 408ce0643c7b1bbacae67ed9778b9c2a 397 PANTHER PTHR11879 1 396 1.3E-249 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 PANTHER PTHR32432:SF4 1 408 1.3E-173 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.30.420.40 154 209 2.1E-22 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.30.420.40 3 83 2.1E-22 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 PANTHER PTHR32432 1 408 1.3E-173 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 3.4E-154 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.30.420.40 210 234 2.3E-35 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.30.420.40 298 351 2.3E-35 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.0E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 PIRSF PIRSF003101 1 411 1.1E-152 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 SUPERFAMILY SSF53067 198 377 1.0E-47 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.305 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 SMART SM00842 10 196 3.4E-101 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Pfam PF14450 Cell division protein FtsA 207 374 2.9E-23 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Pfam PF14450 Cell division protein FtsA 11 180 7.6E-8 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.90.640.10 235 297 8.2E-19 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 SUPERFAMILY SSF53067 8 221 8.03E-61 T 22-04-2016 SAMA_RS01905 bced7efffec4b4e16430a70abaec27ba 411 Gene3D G3DSA:3.30.1490.110 86 153 1.0E-16 T 22-04-2016 SAMA_RS09315 d5bc46c565ea18937180f8a2e7fd4519 78 Gene3D G3DSA:3.30.70.100 1 63 3.4E-18 T 22-04-2016 SAMA_RS09315 d5bc46c565ea18937180f8a2e7fd4519 78 SUPERFAMILY SSF55008 2 65 1.15E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS09315 d5bc46c565ea18937180f8a2e7fd4519 78 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SAMA_RS09315 d5bc46c565ea18937180f8a2e7fd4519 78 Pfam PF00403 Heavy-metal-associated domain 4 60 4.3E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PANTHER PTHR13789:SF214 3 403 3.1E-163 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 402 6.4E-121 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 SUPERFAMILY SSF51905 277 394 5.18E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 SUPERFAMILY SSF51905 8 183 5.18E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 Pfam PF01494 FAD binding domain 8 335 5.1E-21 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PANTHER PTHR13789 3 403 3.1E-163 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 Gene3D G3DSA:3.50.50.60 6 186 4.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 Gene3D G3DSA:3.50.50.60 288 327 4.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 3.1E-12 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.1E-12 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 3.1E-12 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 3.1E-12 T 22-04-2016 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 9 402 3.1E-139 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 SAMA_RS14250 56f04a38212945e904075c5d4de069dc 413 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 304 317 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 Pfam PF02599 Global regulator protein family 1 52 3.1E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 Hamap MF_00167 Carbon storage regulator [csrA]. 1 63 20.739 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.0E-30 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 PANTHER PTHR34984 1 55 5.4E-32 T 22-04-2016 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 5.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 PANTHER PTHR34984:SF1 1 55 5.4E-32 T 22-04-2016 SAMA_RS05470 6d7cdc8df4a8550f7e4ad44709e39074 64 SUPERFAMILY SSF117130 1 54 4.45E-21 T 22-04-2016 SAMA_RS04850 f4c9c01de859ff31e3b6c06e5af8c5b8 324 Pfam PF16074 Type IV Pilus-assembly protein W 195 318 1.2E-32 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 SAMA_RS04850 f4c9c01de859ff31e3b6c06e5af8c5b8 324 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04850 f4c9c01de859ff31e3b6c06e5af8c5b8 324 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 31 5.5E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04850 f4c9c01de859ff31e3b6c06e5af8c5b8 324 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 2.8E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS19150 abfa6f8ea93f4ea8f1165e652ee28b78 175 Pfam PF12690 Intracellular proteinase inhibitor 63 126 8.9E-19 T 22-04-2016 IPR020481 Intracellular proteinase inhibitor BsuPI SAMA_RS19150 abfa6f8ea93f4ea8f1165e652ee28b78 175 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 50 119 2.0E-35 T 22-04-2016 IPR020481 Intracellular proteinase inhibitor BsuPI SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 Pfam PF00593 TonB dependent receptor 433 700 9.0E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 137 4.7E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 SUPERFAMILY SSF56935 63 701 4.71E-66 T 22-04-2016 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 684 701 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 PANTHER PTHR32552 48 393 6.9E-143 T 22-04-2016 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 PANTHER PTHR32552 421 701 6.9E-143 T 22-04-2016 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 Gene3D G3DSA:2.170.130.10 62 137 2.4E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 PANTHER PTHR32552:SF11 48 393 6.9E-143 T 22-04-2016 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 PANTHER PTHR32552:SF11 421 701 6.9E-143 T 22-04-2016 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 Gene3D G3DSA:2.40.170.20 138 386 7.2E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS16835 504377faec45ae3b809fd9fc614ab8b7 701 Gene3D G3DSA:2.40.170.20 421 701 7.2E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 SUPERFAMILY SSF53850 98 303 2.02E-30 T 22-04-2016 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 PANTHER PTHR30537 1 303 1.0E-66 T 22-04-2016 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 Pfam PF03466 LysR substrate binding domain 98 299 2.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 SUPERFAMILY SSF46785 8 88 2.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 Gene3D G3DSA:3.40.190.10 102 187 6.9E-22 T 22-04-2016 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 Gene3D G3DSA:1.10.10.10 5 89 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 3.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 Gene3D G3DSA:3.40.190.10 188 269 7.0E-16 T 22-04-2016 SAMA_RS18730 094cbbefdfeb6eeb35fd6ae6963ec7f2 312 PANTHER PTHR30537:SF26 1 303 1.0E-66 T 22-04-2016 SAMA_RS00640 e444ea54d70a8d5e7db6edb2b2e8df67 153 SUPERFAMILY SSF55729 12 110 1.27E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS00640 e444ea54d70a8d5e7db6edb2b2e8df67 153 Pfam PF13480 Acetyltransferase (GNAT) domain 37 109 1.2E-5 T 22-04-2016 SAMA_RS00640 e444ea54d70a8d5e7db6edb2b2e8df67 153 Gene3D G3DSA:3.40.630.30 10 123 4.6E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 SMART SM00411 1 90 4.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 Gene3D G3DSA:4.10.520.10 1 90 2.9E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.0E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 PANTHER PTHR33175 1 90 8.2E-45 T 22-04-2016 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.6E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.6E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.6E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS06435 a0536c93fafd918edfe5ac9697c3d9f5 90 SUPERFAMILY SSF47729 1 90 1.47E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 SUPERFAMILY SSF48008 81 216 2.62E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 PANTHER PTHR11751 14 100 7.3E-29 T 22-04-2016 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 Gene3D G3DSA:1.20.120.530 77 221 3.8E-38 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 PANTHER PTHR11751:SF436 14 100 7.3E-29 T 22-04-2016 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 Pfam PF07729 FCD domain 84 208 2.7E-24 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 SUPERFAMILY SSF46785 10 78 3.28E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 SMART SM00895 84 209 6.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 SMART SM00345 16 74 1.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 71 1.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 Gene3D G3DSA:1.10.10.10 5 73 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS07945 d5086a30e4a32463f3ef377750512bc8 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 PANTHER PTHR11938 9 332 6.5E-96 T 22-04-2016 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 Gene3D G3DSA:3.20.20.70 1 334 5.2E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 PIRSF PIRSF000164 13 338 5.9E-96 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 Pfam PF01180 Dihydroorotate dehydrogenase 47 333 1.3E-88 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 335 4.9E-139 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 49.855 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SAMA_RS08295 b52b14c5a37dbfbf70a9fa5cfea6ca79 339 SUPERFAMILY SSF51395 1 334 1.98E-99 T 22-04-2016 SAMA_RS02975 4ba6c1953303c8f50459094141dc5551 260 Pfam PF01925 Sulfite exporter TauE/SafE 7 253 7.2E-18 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Gene3D G3DSA:1.10.3820.10 177 311 2.8E-21 T 22-04-2016 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Gene3D G3DSA:1.10.3820.10 28 98 1.4E-6 T 22-04-2016 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 56 320 4.0E-101 T 22-04-2016 IPR020015 Decaheme cytochrome, c-type, DmsE SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 SUPERFAMILY SSF48695 56 310 2.74E-54 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 PANTHER PTHR35038:SF3 38 321 1.6E-92 T 22-04-2016 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Gene3D G3DSA:1.10.1130.10 99 176 6.5E-10 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 PANTHER PTHR35038 38 321 1.6E-92 T 22-04-2016 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 241 278 6.8E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 200 233 8.1E-8 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 87 137 1.2E-5 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 241 278 2.9E-12 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 146 184 2.6E-5 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06320 f91b6fd78a17e5eae93cd3bc7de222b0 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 197 234 5.2E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 SUPERFAMILY SSF109998 203 247 1.83E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 SUPERFAMILY SSF109998 41 169 1.83E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 PANTHER PTHR10657 243 531 8.4E-133 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 PANTHER PTHR10657 1 171 8.4E-133 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 Pfam PF13624 SurA N-terminal domain 1 165 1.2E-46 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 SUPERFAMILY SSF54534 262 365 1.24E-28 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 Pfam PF13616 PPIC-type PPIASE domain 265 366 2.2E-29 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 PANTHER PTHR10657:SF11 243 531 8.4E-133 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 PANTHER PTHR10657:SF11 1 171 8.4E-133 T 22-04-2016 SAMA_RS06440 451f4af273dfdf12d4e99c1f5c9e21e7 615 Gene3D G3DSA:3.10.50.40 261 388 2.1E-40 T 22-04-2016 SAMA_RS12235 f43d94a97423e9efde4e64bb6fcda99a 159 Pfam PF11163 Protein of unknown function (DUF2947) 5 156 1.3E-65 T 22-04-2016 IPR021334 Protein of unknown function DUF2947 SAMA_RS06660 6fa52485e204301f37638432f1ed47f6 165 Pfam PF01863 Protein of unknown function DUF45 94 151 9.7E-13 T 22-04-2016 IPR002725 Protein of unknown function DUF45 SAMA_RS06660 6fa52485e204301f37638432f1ed47f6 165 PANTHER PTHR30399 3 163 1.9E-88 T 22-04-2016 SAMA_RS06660 6fa52485e204301f37638432f1ed47f6 165 PANTHER PTHR30399:SF4 3 163 1.9E-88 T 22-04-2016 SAMA_RS00335 156eb000b5aef46d5cec6d272efde9c6 316 SUPERFAMILY SSF53850 21 243 4.23E-31 T 22-04-2016 SAMA_RS00335 156eb000b5aef46d5cec6d272efde9c6 316 PANTHER PTHR30024 3 278 1.5E-33 T 22-04-2016 SAMA_RS00335 156eb000b5aef46d5cec6d272efde9c6 316 Pfam PF09084 NMT1/THI5 like 36 242 5.8E-21 T 22-04-2016 IPR015168 SsuA/THI5-like SAMA_RS00335 156eb000b5aef46d5cec6d272efde9c6 316 PANTHER PTHR30024:SF8 3 278 1.5E-33 T 22-04-2016 SAMA_RS00335 156eb000b5aef46d5cec6d272efde9c6 316 Gene3D G3DSA:3.40.190.10 119 224 5.1E-13 T 22-04-2016 SAMA_RS08800 5bad3c8eda23b9b7ed7d0c16652fa29c 202 SUPERFAMILY SSF55811 37 189 1.35E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS08800 5bad3c8eda23b9b7ed7d0c16652fa29c 202 PANTHER PTHR12992 7 196 2.0E-49 T 22-04-2016 SAMA_RS08800 5bad3c8eda23b9b7ed7d0c16652fa29c 202 Gene3D G3DSA:3.90.79.10 34 196 3.2E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS08800 5bad3c8eda23b9b7ed7d0c16652fa29c 202 Pfam PF00293 NUDIX domain 40 151 1.1E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS03540 d3c7d0d011d940572a90b971d18077cc 311 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 12 304 5.3E-69 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SAMA_RS03540 d3c7d0d011d940572a90b971d18077cc 311 SUPERFAMILY SSF54909 6 306 1.97E-100 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS03540 d3c7d0d011d940572a90b971d18077cc 311 PANTHER PTHR30521 21 306 1.4E-106 T 22-04-2016 SAMA_RS03540 d3c7d0d011d940572a90b971d18077cc 311 PANTHER PTHR30521:SF0 21 306 1.4E-106 T 22-04-2016 SAMA_RS03540 d3c7d0d011d940572a90b971d18077cc 311 Pfam PF04261 Dyp-type peroxidase family 51 304 2.0E-71 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 SUPERFAMILY SSF53613 2 317 5.92E-75 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 PANTHER PTHR10584:SF161 1 342 6.7E-89 T 22-04-2016 SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 PANTHER PTHR10584 1 342 6.7E-89 T 22-04-2016 SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 Gene3D G3DSA:3.40.1190.20 2 319 1.2E-77 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS02990 f584352ebb85b7dabcbdc1bb76270000 343 Pfam PF00294 pfkB family carbohydrate kinase 3 306 2.1E-55 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS05905 22f925c99c1ff159d225ec27d4c93fe4 104 Pfam PF06127 Protein of unknown function (DUF962) 5 98 1.2E-36 T 22-04-2016 IPR009305 Protein of unknown function DUF962 SAMA_RS05905 22f925c99c1ff159d225ec27d4c93fe4 104 PANTHER PTHR34205 5 98 3.3E-41 T 22-04-2016 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 Gene3D G3DSA:3.90.1300.10 2 565 1.2E-119 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 PANTHER PTHR11895:SF8 317 561 4.5E-208 T 22-04-2016 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 PANTHER PTHR11895:SF8 1 296 4.5E-208 T 22-04-2016 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 Pfam PF01425 Amidase 25 347 5.8E-46 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 Pfam PF01425 Amidase 460 544 6.5E-6 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 SUPERFAMILY SSF75304 1 561 4.45E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 PANTHER PTHR11895 317 561 4.5E-208 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS13160 87b4ed9dea8827c30774734214819d47 567 PANTHER PTHR11895 1 296 4.5E-208 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Gene3D G3DSA:3.40.1450.10 79 310 3.8E-96 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 SUPERFAMILY SSF64158 78 308 1.07E-86 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 PANTHER PTHR31637 4 513 5.1E-285 T 22-04-2016 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 50.916 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 SUPERFAMILY SSF53649 5 78 1.96E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 SUPERFAMILY SSF53649 310 509 1.96E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Gene3D G3DSA:3.40.720.10 314 509 1.3E-88 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Gene3D G3DSA:3.40.720.10 5 78 1.3E-88 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 298 2.2E-81 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 PANTHER PTHR31637:SF0 4 513 5.1E-285 T 22-04-2016 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 PIRSF PIRSF001492 1 512 5.5E-207 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 509 3.5E-228 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SAMA_RS00305 4f3e2d0e096e1248b2b7ea6da550dbb2 513 Pfam PF01676 Metalloenzyme superfamily 7 496 4.1E-82 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 SUPERFAMILY SSF51735 95 274 2.8E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 PANTHER PTHR10996 3 306 1.1E-113 T 22-04-2016 SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 PANTHER PTHR10996:SF148 3 306 1.1E-113 T 22-04-2016 SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 212 228 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 Gene3D G3DSA:3.40.50.720 12 109 2.6E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 101 273 2.1E-45 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SAMA_RS15870 129490b4344ef319ece06be2b35f0abe 308 Gene3D G3DSA:3.40.50.720 110 274 3.7E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11875 8b24a7ce694bbd492686719a53cf08d7 367 Gene3D G3DSA:3.40.50.2300 5 134 4.8E-31 T 22-04-2016 SAMA_RS11875 8b24a7ce694bbd492686719a53cf08d7 367 PANTHER PTHR26402 6 153 5.1E-30 T 22-04-2016 SAMA_RS11875 8b24a7ce694bbd492686719a53cf08d7 367 SUPERFAMILY SSF52172 5 138 7.26E-32 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS11875 8b24a7ce694bbd492686719a53cf08d7 367 SMART SM00448 6 118 7.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11875 8b24a7ce694bbd492686719a53cf08d7 367 Pfam PF00072 Response regulator receiver domain 8 110 2.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Gene3D G3DSA:2.40.170.20 174 529 6.1E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Gene3D G3DSA:2.40.170.20 581 611 6.1E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Gene3D G3DSA:2.40.170.20 651 964 6.1E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 44 242 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 273 367 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 505 617 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 721 766 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 800 964 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552:SF16 640 692 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Pfam PF00593 TonB dependent receptor 658 963 9.6E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 724 768 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 354 497 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 37 236 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 276 327 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 547 621 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 800 964 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 SUPERFAMILY SSF56935 648 687 3.66E-89 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 44 242 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 273 367 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 505 617 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 721 766 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 800 964 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 PANTHER PTHR32552 640 692 1.1E-129 T 22-04-2016 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 170 8.7E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 Gene3D G3DSA:2.170.130.10 65 173 2.0E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS01590 24b05f7fdd743d0513820e7849521e76 964 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 47 964 3.7E-188 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 PANTHER PTHR12053 16 444 2.5E-157 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 Gene3D G3DSA:3.50.30.30 94 226 4.0E-6 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 Gene3D G3DSA:3.40.630.10 28 79 2.0E-59 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 Gene3D G3DSA:3.40.630.10 240 439 2.0E-59 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 PANTHER PTHR12053:SF3 16 444 2.5E-157 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 SUPERFAMILY SSF53187 183 436 1.12E-60 T 22-04-2016 SAMA_RS04800 6200644b71e153cc3afb8297357192f6 448 Pfam PF04389 Peptidase family M28 241 430 9.6E-29 T 22-04-2016 IPR007484 Peptidase M28 SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 60 724 3.3E-122 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 SUPERFAMILY SSF48695 225 377 7.34E-34 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 SUPERFAMILY SSF48695 550 718 7.34E-34 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 Gene3D G3DSA:3.90.10.10 207 256 2.7E-12 T 22-04-2016 SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 Gene3D G3DSA:3.90.10.10 555 719 1.6E-12 T 22-04-2016 SAMA_RS06335 3b554e1145126157fcbfd5c6b566d953 727 Gene3D G3DSA:3.90.10.10 295 373 2.7E-12 T 22-04-2016 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 Pfam PF08443 RimK-like ATP-grasp domain 105 294 2.6E-45 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 PANTHER PTHR21621 1 295 9.2E-131 T 22-04-2016 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 Gene3D G3DSA:3.30.470.20 183 285 2.6E-26 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 Gene3D G3DSA:3.30.1490.20 110 182 1.8E-14 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 SUPERFAMILY SSF56059 106 294 3.69E-42 T 22-04-2016 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 Gene3D G3DSA:3.40.50.20 16 109 8.5E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 PANTHER PTHR21621:SF2 1 295 9.2E-131 T 22-04-2016 SAMA_RS10435 f1850c614bd9ccf3a75515fd5db3c67d 309 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 5 294 7.7E-70 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 27.557 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 1.5E-53 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 PANTHER PTHR30335 2 202 9.3E-121 T 22-04-2016 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 200 4.2E-95 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 PANTHER PTHR30335:SF1 2 202 9.3E-121 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15535 da70f338258b3e8191b6f2f10600cc4a 202 PIRSF PIRSF006102 1 202 9.1E-56 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 Pfam PF13416 Bacterial extracellular solute-binding protein 43 332 8.4E-33 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 SUPERFAMILY SSF53850 26 365 7.09E-101 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PIRSF PIRSF019574 1 366 3.9E-141 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PANTHER PTHR30222 1 366 6.6E-204 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PANTHER PTHR30222:SF11 1 366 6.6E-204 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 Gene3D G3DSA:3.40.190.10 37 147 3.5E-9 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 Gene3D G3DSA:3.40.190.10 148 315 2.8E-74 T 22-04-2016 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS13840 0ac4b03dbe613de2d867063987721d65 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 4.8E-68 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 PIRSF PIRSF004848 1 235 7.7E-79 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 PANTHER PTHR10146 4 235 9.7E-109 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 Pfam PF01168 Alanine racemase, N-terminal domain 23 231 5.6E-28 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 Gene3D G3DSA:3.20.20.10 1 234 3.0E-93 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 SUPERFAMILY SSF51419 1 229 3.93E-80 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS12930 fb1c97081c33773fc69bc100e683096e 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 231 1.4E-88 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 Gene3D G3DSA:1.10.10.10 127 219 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 PANTHER PTHR26402 1 219 1.3E-80 T 22-04-2016 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 SMART SM00862 147 219 7.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-33 T 22-04-2016 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 SUPERFAMILY SSF46894 126 219 2.3E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 SMART SM00448 1 112 1.7E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 SUPERFAMILY SSF52172 1 118 2.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 PANTHER PTHR26402:SF578 1 219 1.3E-80 T 22-04-2016 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15680 b4c18b1a6da2239ab518a7bea3d3c6e1 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 219 7.5E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 24 146 29.815 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 28 136 3.2E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 SUPERFAMILY SSF109635 7 106 5.49E-38 T 22-04-2016 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 PANTHER PTHR33823 4 145 7.1E-69 T 22-04-2016 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 139 5.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 PANTHER PTHR33823:SF2 4 145 7.1E-69 T 22-04-2016 SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 110 134 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SAMA_RS04095 f9a0d3abc08bb23b5c60292418ac6f8f 147 SUPERFAMILY SSF57716 107 145 1.71E-9 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 20 559 9.7E-277 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 SUPERFAMILY SSF55124 10 146 5.23E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 PANTHER PTHR11493:SF47 1 558 9.1E-257 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 0.035 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 174 330 1.1E-43 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Gene3D G3DSA:3.30.413.10 150 341 1.9E-69 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Gene3D G3DSA:3.30.413.10 430 558 9.5E-32 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 140 2.4E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 7.0E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 1.4E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 1.4E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 SUPERFAMILY SSF55124 347 422 1.42E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 SUPERFAMILY SSF56014 429 566 1.57E-34 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 PANTHER PTHR11493 1 558 9.1E-257 T 22-04-2016 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 11 571 58.377 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Gene3D G3DSA:3.90.480.10 75 147 7.9E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 Gene3D G3DSA:3.90.480.10 343 422 7.9E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14825 4d027b43ca68487dec00c7d5e466ebe5 571 SUPERFAMILY SSF56014 150 345 5.76E-58 T 22-04-2016 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 PANTHER PTHR23152:SF4 6 940 0.0 T 22-04-2016 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 SMART SM00861 598 791 7.9E-58 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Pfam PF00676 Dehydrogenase E1 component 220 519 8.7E-53 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 936 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 SUPERFAMILY SSF52518 126 533 1.62E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Gene3D G3DSA:3.40.50.970 167 546 3.8E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 PIRSF PIRSF000157 1 939 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 937 7.6E-51 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 SUPERFAMILY SSF52518 581 798 6.04E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Pfam PF02779 Transketolase, pyrimidine binding domain 598 792 6.2E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.7E-18 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 Gene3D G3DSA:3.40.50.970 598 794 5.9E-27 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS07430 924fb2665ae63667b0fbcf672ad92cb8 940 PANTHER PTHR23152 6 940 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SAMA_RS10560 cd4207f5d3e21cbc075ca9e0076d99d6 316 Gene3D G3DSA:3.90.1200.10 127 309 3.7E-16 T 22-04-2016 SAMA_RS10560 cd4207f5d3e21cbc075ca9e0076d99d6 316 Pfam PF01636 Phosphotransferase enzyme family 28 269 5.0E-17 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS10560 cd4207f5d3e21cbc075ca9e0076d99d6 316 SUPERFAMILY SSF56112 6 296 2.89E-25 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 SUPERFAMILY SSF52374 6 267 1.1E-78 T 22-04-2016 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 237 1.1E-42 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 Gene3D G3DSA:3.40.50.620 6 70 1.9E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 Gene3D G3DSA:3.40.50.620 170 218 1.9E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 Gene3D G3DSA:3.90.800.10 71 168 2.2E-17 T 22-04-2016 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PANTHER PTHR11451 5 219 2.0E-109 T 22-04-2016 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PANTHER PTHR11451:SF35 5 219 2.0E-109 T 22-04-2016 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 285 40.144 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 262 2.3E-107 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 5.3E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 5.3E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 5.3E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS04090 c3087b935309c5fc631ecf294d937be1 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 5.3E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 SMART SM00900 101 193 1.0E-34 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 PIRSF PIRSF006091 1 206 4.9E-82 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 195 26.09 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 PANTHER PTHR36118 1 212 4.9E-75 T 22-04-2016 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 Pfam PF04205 FMN-binding domain 101 190 3.9E-18 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 194 4.6E-63 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SAMA_RS09605 3745325abf7ca146ef32d223a2af4b14 215 PANTHER PTHR36118:SF1 1 212 4.9E-75 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 PANTHER PTHR30537:SF21 5 309 7.8E-137 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 SUPERFAMILY SSF53850 89 295 2.99E-44 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 SUPERFAMILY SSF46785 5 111 1.24E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 8.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 PANTHER PTHR30537 5 309 7.8E-137 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 Gene3D G3DSA:3.40.190.10 160 260 5.5E-22 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 Gene3D G3DSA:3.40.190.10 87 151 2.5E-5 T 22-04-2016 SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 Gene3D G3DSA:1.10.10.10 4 84 2.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS16760 249e78b910e01c9af6e361c23579bc7b 319 Pfam PF03466 LysR substrate binding domain 87 292 6.8E-43 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 PIRSF PIRSF000412 1 417 4.9E-172 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.9E-186 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 SUPERFAMILY SSF53383 5 416 1.32E-184 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 PANTHER PTHR11680:SF9 7 417 0.0 T 22-04-2016 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 Gene3D G3DSA:3.90.1150.10 286 417 9.3E-57 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 54.02 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 Gene3D G3DSA:3.40.640.10 37 285 7.1E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS05290 4919c69e09e58d2a905739cfc89f4992 417 PANTHER PTHR11680 7 417 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 PANTHER PTHR32145 1 241 4.9E-69 T 22-04-2016 SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 SUPERFAMILY SSF56281 7 234 2.57E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 SMART SM00849 29 218 1.7E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 9.8E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 PANTHER PTHR32145:SF7 1 241 4.9E-69 T 22-04-2016 SAMA_RS07590 c4cad029e4cad601e756f3e0ae57ffce 244 Gene3D G3DSA:3.60.15.10 11 237 7.3E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 PANTHER PTHR10681:SF104 50 176 4.0E-24 T 22-04-2016 SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 Gene3D G3DSA:3.40.30.10 209 357 3.7E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 SUPERFAMILY SSF52833 209 359 1.96E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 SUPERFAMILY SSF52833 50 188 3.34E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 PANTHER PTHR10681 50 176 4.0E-24 T 22-04-2016 SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 Pfam PF00578 AhpC/TSA family 51 168 3.4E-20 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS14205 7cb46e1ffd8cd0799123589b10ffe692 363 Gene3D G3DSA:3.40.30.10 19 201 3.4E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 228 260 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 Pfam PF00815 Histidinol dehydrogenase 27 425 1.5E-161 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 SUPERFAMILY SSF53720 22 426 1.04E-85 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 425 40.329 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 359 377 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 106 133 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 228 249 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 250 269 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 318 343 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.1E-95 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 424 1.8E-156 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PANTHER PTHR21256 1 431 1.1E-257 T 22-04-2016 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 Gene3D G3DSA:3.40.50.1980 28 238 1.9E-76 T 22-04-2016 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PANTHER PTHR21256:SF14 1 431 1.1E-257 T 22-04-2016 SAMA_RS10155 aa1c71402897315621c16e115ecd38da 435 PIRSF PIRSF000099 1 428 5.6E-158 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 SMART SM00404 53 152 0.0026 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 SUPERFAMILY SSF52799 3 157 8.57E-23 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 98 108 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 Pfam PF00782 Dual specificity phosphatase, catalytic domain 28 137 4.4E-10 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 Gene3D G3DSA:3.90.190.10 26 151 2.7E-20 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like SAMA_RS11500 b131d00bd3642e6b75f0bfc7191db213 158 PANTHER PTHR23339 24 147 6.8E-12 T 22-04-2016 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 41 520 40.17 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Gene3D G3DSA:3.40.50.10490 7 93 5.9E-134 T 22-04-2016 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Gene3D G3DSA:3.40.50.10490 289 502 5.9E-134 T 22-04-2016 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Pfam PF00342 Phosphoglucose isomerase 47 537 2.5E-208 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 257 275 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 145 164 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 479 493 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 334 355 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 461 479 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PRINTS PR00662 Glucose-6-phosphate isomerase signature 493 506 1.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Gene3D G3DSA:1.10.1390.10 503 542 2.9E-18 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 493 510 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 SUPERFAMILY SSF53697 4 542 1.5E-211 T 22-04-2016 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 261 274 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 PANTHER PTHR11469 1 544 6.5E-293 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS04760 61a7a8d49f62d934df799e7e6bb45637 545 Gene3D G3DSA:3.40.50.10490 94 285 5.2E-79 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 229 344 2.7E-13 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 SUPERFAMILY SSF55545 218 346 4.64E-20 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 308 328 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 341 358 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 744 761 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 370 391 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 726 742 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 513 531 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 447 464 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 540 553 1.1E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 806 880 4.9E-26 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Gene3D G3DSA:2.60.40.290 38 171 3.1E-43 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 347 762 4.5E-101 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 SUPERFAMILY SSF51445 347 774 3.96E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 SMART SM01081 46 211 3.6E-100 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600:SF12 297 407 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600:SF12 794 883 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600:SF12 430 471 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600:SF12 489 684 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600:SF12 714 772 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Gene3D G3DSA:3.20.20.80 345 832 2.8E-140 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Pfam PF03173 Putative carbohydrate binding domain 48 209 2.1E-56 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 SUPERFAMILY SSF49384 38 214 3.14E-56 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 SUPERFAMILY SSF81296 787 883 2.8E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Gene3D G3DSA:2.60.40.320 833 882 7.3E-21 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 Gene3D G3DSA:3.30.379.10 225 344 2.3E-18 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600 297 407 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600 794 883 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600 430 471 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600 489 684 6.4E-209 T 22-04-2016 SAMA_RS04920 e22272ea090e0e3ab6cb50424e90cbc8 884 PANTHER PTHR22600 714 772 6.4E-209 T 22-04-2016 SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 3.5E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 SUPERFAMILY SSF55129 3 58 2.09E-22 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 PIRSF PIRSF002211 1 59 4.7E-29 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 PANTHER PTHR15892 1 58 1.7E-29 T 22-04-2016 SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.368 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 Gene3D G3DSA:3.30.1390.20 2 59 4.9E-32 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SAMA_RS01215 c90ea24bcbd6cbe3404b260016148e58 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.0E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PIRSF PIRSF036893 1 176 3.6E-33 T 22-04-2016 IPR022271 Lipocalin, ApoD type SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 ProSitePatterns PS00213 Lipocalin signature. 29 42 - T 22-04-2016 IPR022272 Lipocalin family conserved site SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 Gene3D G3DSA:2.40.128.20 6 172 1.3E-41 T 22-04-2016 IPR012674 Calycin SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 SUPERFAMILY SSF50814 7 174 2.65E-38 T 22-04-2016 IPR011038 Calycin-like SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PANTHER PTHR10612:SF7 23 172 1.8E-38 T 22-04-2016 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PANTHER PTHR10612 23 172 1.8E-38 T 22-04-2016 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 Pfam PF08212 Lipocalin-like domain 31 170 1.2E-32 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PRINTS PR01171 Bacterial lipocalin signature 120 128 1.2E-16 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PRINTS PR01171 Bacterial lipocalin signature 162 172 1.2E-16 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PRINTS PR01171 Bacterial lipocalin signature 30 44 1.2E-16 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PRINTS PR01171 Bacterial lipocalin signature 135 146 1.2E-16 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SAMA_RS10605 d2d1f30192915f27bbcdec4fb99d9d30 176 PRINTS PR01171 Bacterial lipocalin signature 47 63 1.2E-16 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 SUPERFAMILY SSF47819 194 290 2.62E-24 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 Pfam PF01612 3'-5' exonuclease 5 171 2.1E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 SMART SM00474 4 172 5.3E-42 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 PANTHER PTHR12124 1 346 6.4E-79 T 22-04-2016 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 SUPERFAMILY SSF47819 297 367 4.64E-17 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 SUPERFAMILY SSF53098 3 209 2.28E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 PANTHER PTHR12124:SF42 1 346 6.4E-79 T 22-04-2016 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 Gene3D G3DSA:3.30.420.10 3 182 1.0E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 Hamap MF_01899 Ribonuclease D [rnd]. 4 369 42.408 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 TIGRFAM TIGR01388 rnd: ribonuclease D 7 369 3.0E-114 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 Pfam PF00570 HRDC domain 214 281 6.7E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SAMA_RS10110 e4ad28567867d82e3105e5c3f819670b 371 SMART SM00341 211 291 7.8E-13 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SAMA_RS08200 480a99add91262c27faf91dd32e69009 156 Gene3D G3DSA:3.10.590.10 1 150 1.5E-34 T 22-04-2016 IPR002740 EVE domain SAMA_RS08200 480a99add91262c27faf91dd32e69009 156 Pfam PF01878 EVE domain 2 151 9.4E-58 T 22-04-2016 IPR002740 EVE domain SAMA_RS08200 480a99add91262c27faf91dd32e69009 156 SUPERFAMILY SSF88697 1 153 7.81E-63 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS08200 480a99add91262c27faf91dd32e69009 156 PANTHER PTHR14087 1 153 2.4E-79 T 22-04-2016 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 Pfam PF00474 Sodium:solute symporter family 379 494 7.0E-16 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 Pfam PF00474 Sodium:solute symporter family 33 299 1.4E-33 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 PANTHER PTHR11819:SF159 345 572 1.4E-239 T 22-04-2016 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 PANTHER PTHR11819:SF159 4 312 1.4E-239 T 22-04-2016 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 PANTHER PTHR11819 345 572 1.4E-239 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 PANTHER PTHR11819 4 312 1.4E-239 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS07920 6536b08172f8887ab585e83672bc85e9 572 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 563 2.7E-262 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 Gene3D G3DSA:3.40.190.10 92 175 1.7E-11 T 22-04-2016 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 Gene3D G3DSA:3.40.190.10 176 262 7.5E-20 T 22-04-2016 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 PANTHER PTHR30126 3 294 7.3E-93 T 22-04-2016 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 Pfam PF03466 LysR substrate binding domain 91 292 1.8E-44 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 SUPERFAMILY SSF46785 2 109 2.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 PANTHER PTHR30126:SF11 3 294 7.3E-93 T 22-04-2016 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 SUPERFAMILY SSF53850 91 294 4.67E-41 T 22-04-2016 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS09855 4c6785a89b487d4e17a0a9def8710378 302 Gene3D G3DSA:1.10.10.10 3 86 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04355 7004d626dcfdc92ddc7a88d27c366030 266 Pfam PF02673 Bacitracin resistance protein BacA 7 258 6.2E-76 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SAMA_RS04355 7004d626dcfdc92ddc7a88d27c366030 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.1E-77 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SAMA_RS04355 7004d626dcfdc92ddc7a88d27c366030 266 PANTHER PTHR30622 1 264 3.4E-123 T 22-04-2016 SAMA_RS04355 7004d626dcfdc92ddc7a88d27c366030 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.368 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SAMA_RS04355 7004d626dcfdc92ddc7a88d27c366030 266 PANTHER PTHR30622:SF4 1 264 3.4E-123 T 22-04-2016 SAMA_RS05205 242857dc36745dce0b0aedf2f5ca7cf1 278 PANTHER PTHR30217 1 268 1.3E-88 T 22-04-2016 SAMA_RS05205 242857dc36745dce0b0aedf2f5ca7cf1 278 Pfam PF01136 Peptidase family U32 92 244 1.6E-13 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS05205 242857dc36745dce0b0aedf2f5ca7cf1 278 PANTHER PTHR30217:SF8 1 268 1.3E-88 T 22-04-2016 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 PANTHER PTHR22981:SF49 1 288 4.2E-157 T 22-04-2016 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 5.3E-47 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 PIRSF PIRSF000103 1 291 1.8E-72 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 Gene3D G3DSA:1.10.1040.10 165 288 1.8E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 PANTHER PTHR22981 1 288 4.2E-157 T 22-04-2016 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 SUPERFAMILY SSF51735 2 164 3.29E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 Gene3D G3DSA:3.40.50.720 1 164 1.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 SUPERFAMILY SSF48179 164 288 7.25E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS10315 0a96fbebb7be1bea5995c4228904c089 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 1.2E-34 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SAMA_RS13025 54d824515e439a3dec7702f783707249 163 SUPERFAMILY SSF46894 91 160 1.19E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS13025 54d824515e439a3dec7702f783707249 163 Pfam PF00196 Bacterial regulatory proteins, luxR family 104 151 1.9E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS13025 54d824515e439a3dec7702f783707249 163 Gene3D G3DSA:1.10.10.10 88 160 3.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13025 54d824515e439a3dec7702f783707249 163 SMART SM00421 101 158 2.0E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 PANTHER PTHR11741 1 280 1.1E-135 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Pfam PF00889 Elongation factor TS 71 260 1.8E-60 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Gene3D G3DSA:3.30.479.20 56 92 4.9E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Gene3D G3DSA:3.30.479.20 225 263 4.9E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Gene3D G3DSA:3.30.479.20 164 179 4.9E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Gene3D G3DSA:1.10.8.10 1 54 2.5E-28 T 22-04-2016 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Gene3D G3DSA:1.10.286.20 180 224 9.2E-21 T 22-04-2016 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 SUPERFAMILY SSF54713 141 277 1.68E-50 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 SUPERFAMILY SSF46934 3 53 6.53E-19 T 22-04-2016 IPR009060 UBA-like GO:0005515 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 4.6E-109 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 SUPERFAMILY SSF54713 55 136 8.94E-18 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SAMA_RS05975 298f5f37422a2c49bd47f13cc01dfbb9 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 277 78.307 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 SMART SM00363 5 61 5.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 SUPERFAMILY SSF55120 64 235 3.6E-33 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 Pfam PF01479 S4 domain 6 39 3.1E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 SUPERFAMILY SSF55174 5 78 3.87E-10 T 22-04-2016 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 Gene3D G3DSA:3.10.290.10 4 65 2.3E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 231 2.1E-39 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 PANTHER PTHR21600:SF24 6 238 1.8E-64 T 22-04-2016 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 PANTHER PTHR21600 6 238 1.8E-64 T 22-04-2016 SAMA_RS15335 cb1360d6ab171919eaa32c0102398327 249 Pfam PF00849 RNA pseudouridylate synthase 65 198 1.3E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 194 9.6E-63 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 Gene3D G3DSA:3.40.50.300 4 163 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 SUPERFAMILY SSF52540 2 180 2.03E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 PANTHER PTHR11669:SF8 14 177 7.3E-59 T 22-04-2016 SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 PANTHER PTHR11669 14 177 7.3E-59 T 22-04-2016 SAMA_RS10650 f2625e251d26a278d89359bc7d3de34c 304 Pfam PF13177 DNA polymerase III, delta subunit 9 163 9.2E-46 T 22-04-2016 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 38 60 3.4E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 25 375 7.4E-150 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 332 3.6E-32 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 230 2.0E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 7.0E-81 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 Gene3D G3DSA:4.10.480.10 250 334 3.1E-38 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 Gene3D G3DSA:3.40.50.700 72 248 6.8E-56 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PANTHER PTHR30013 23 378 5.8E-212 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PIRSF PIRSF000310 27 378 8.1E-150 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 PANTHER PTHR30013:SF7 23 378 5.8E-212 T 22-04-2016 SAMA_RS08765 e0057c8efbddad50b140b317203b5452 378 SUPERFAMILY SSF56770 72 334 1.3E-89 T 22-04-2016 SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 90 185 8.5E-14 T 22-04-2016 IPR003741 LUD domain SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 PANTHER PTHR32479:SF11 79 189 1.0E-22 T 22-04-2016 SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 PANTHER PTHR32479 79 189 1.0E-22 T 22-04-2016 SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 SUPERFAMILY SSF100950 31 189 1.13E-27 T 22-04-2016 SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 Gene3D G3DSA:3.40.50.10420 82 189 3.1E-30 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SAMA_RS12760 da4cbaad44ac9514ea16ae956733b1c0 189 Gene3D G3DSA:3.40.50.10420 4 38 3.1E-30 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 Pfam PF00529 HlyD membrane-fusion protein of T1SS 69 341 3.5E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 357 1.4E-71 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 4.8E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 SUPERFAMILY SSF111369 57 273 6.15E-36 T 22-04-2016 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 PANTHER PTHR30469 1 368 1.3E-136 T 22-04-2016 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 PANTHER PTHR30469:SF11 1 368 1.3E-136 T 22-04-2016 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 Gene3D G3DSA:2.40.50.100 70 102 1.5E-11 T 22-04-2016 SAMA_RS17030 fed018590ea16254509c1f06396e9d94 372 Gene3D G3DSA:2.40.50.100 163 192 1.5E-11 T 22-04-2016 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 SUPERFAMILY SSF48452 1 176 1.55E-66 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 PANTHER PTHR23004:SF7 4 180 1.0E-60 T 22-04-2016 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 Gene3D G3DSA:1.20.58.320 3 79 1.5E-27 T 22-04-2016 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 177 1.1E-59 T 22-04-2016 IPR010323 Protein of unknown function DUF924 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 Gene3D G3DSA:1.25.40.10 81 180 2.3E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 ProSitePatterns PS00414 Profilin signature. 1 9 - T 22-04-2016 IPR027310 Profilin conserved site GO:0003779 SAMA_RS15220 3a004a6a01f97094aabe6d2ee736939b 180 PANTHER PTHR23004 4 180 1.0E-60 T 22-04-2016 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 PANTHER PTHR11712 3 409 5.8E-114 T 22-04-2016 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 SUPERFAMILY SSF53901 3 252 4.32E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 9.6E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 8.5E-37 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 SUPERFAMILY SSF53901 218 408 2.2E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 Gene3D G3DSA:3.40.47.10 264 409 1.2E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 Gene3D G3DSA:3.40.47.10 3 260 9.7E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17660 e722e34d3d408a8bafbbded79b1e263b 410 SMART SM00825 Beta-ketoacyl synthase 5 408 3.1E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Pfam PF00037 4Fe-4S binding domain 47 63 9.1E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Gene3D G3DSA:3.30.70.20 137 172 3.4E-15 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Gene3D G3DSA:3.30.70.20 173 221 3.0E-32 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Gene3D G3DSA:3.30.70.20 43 102 3.0E-32 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Pfam PF13247 4Fe-4S dicluster domain 93 188 7.4E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 PANTHER PTHR11938 37 199 1.4E-82 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 PANTHER PTHR11938:SF110 37 199 1.4E-82 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 Gene3D G3DSA:3.30.70.20 103 136 5.4E-13 T 22-04-2016 SAMA_RS15160 6e59aadd2f1a7f256c238194781c7ee4 230 SUPERFAMILY SSF54862 42 222 2.2E-62 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 PANTHER PTHR11938:SF96 143 179 4.2E-102 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 PANTHER PTHR11938:SF96 1 125 4.2E-102 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 Pfam PF13247 4Fe-4S dicluster domain 54 125 4.2E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 PANTHER PTHR11938 143 179 4.2E-102 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 PANTHER PTHR11938 1 125 4.2E-102 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 Gene3D G3DSA:3.30.70.20 65 120 1.5E-22 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 Gene3D G3DSA:3.30.70.20 4 64 4.2E-20 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 Gene3D G3DSA:3.30.70.20 121 180 4.2E-20 T 22-04-2016 SAMA_RS18765 8c0ee6618ade62345565dee73f1239d5 198 SUPERFAMILY SSF54862 4 182 7.53E-48 T 22-04-2016 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 PANTHER PTHR13847:SF210 1 428 2.4E-239 T 22-04-2016 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 Pfam PF01266 FAD dependent oxidoreductase 31 382 5.1E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 PANTHER PTHR13847 1 428 2.4E-239 T 22-04-2016 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 SUPERFAMILY SSF51905 30 254 9.97E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 SUPERFAMILY SSF51905 346 413 9.97E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 Gene3D G3DSA:3.50.50.60 174 253 3.4E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 Gene3D G3DSA:3.50.50.60 18 120 3.4E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13820 d2242c277f955f0f2d9740a8d2f16994 428 Gene3D G3DSA:3.50.50.60 346 402 3.4E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283 231 263 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283 418 578 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283 343 369 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283 11 22 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283 41 214 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 Pfam PF03600 Citrate transporter 20 524 3.0E-28 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 Pfam PF02080 TrkA-C domain 211 283 2.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 Pfam PF02080 TrkA-C domain 298 355 7.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 SUPERFAMILY SSF116726 208 288 8.37E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283:SF79 231 263 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283:SF79 418 578 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283:SF79 343 369 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283:SF79 11 22 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 PANTHER PTHR10283:SF79 41 214 2.0E-60 T 22-04-2016 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 SUPERFAMILY SSF116726 295 355 8.89E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 Gene3D G3DSA:3.30.70.1450 209 291 7.3E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS15085 f3b6c884ac690b2a14f6c86e16791d5c 583 Gene3D G3DSA:3.30.70.1450 296 355 5.5E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 PANTHER PTHR12558 155 367 7.4E-17 T 22-04-2016 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 123 1.0E-27 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 Pfam PF14559 Tetratricopeptide repeat 150 191 1.9E-6 T 22-04-2016 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 SMART SM00028 234 267 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 SMART SM00028 163 196 1.8E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 Gene3D G3DSA:1.25.40.10 203 283 9.9E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 PANTHER PTHR12558:SF12 155 367 7.4E-17 T 22-04-2016 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 Gene3D G3DSA:1.25.40.10 113 202 1.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS01290 64f1071c90167c659d7817e0f95d6946 417 SUPERFAMILY SSF48452 150 261 9.97E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PANTHER PTHR19370:SF98 2 231 7.5E-69 T 22-04-2016 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 SUPERFAMILY SSF52343 105 248 6.68E-34 T 22-04-2016 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 Pfam PF00175 Oxidoreductase NAD-binding domain 113 223 1.7E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 112 131 4.8E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 137 146 4.8E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 149 160 4.8E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 48 55 4.8E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 217 4.8E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 91 2.0E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS03505 35026375a46430dd33648c643da3c401 248 Gene3D G3DSA:2.40.30.10 2 90 1.1E-24 T 22-04-2016 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 SUPERFAMILY SSF63380 2 95 1.31E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PANTHER PTHR19370 2 231 7.5E-69 T 22-04-2016 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 146 3.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 217 3.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 29 41 3.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 112 131 3.0E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS03505 35026375a46430dd33648c643da3c401 248 Gene3D G3DSA:3.40.50.80 102 248 8.0E-40 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619:SF1 549 822 2.3E-178 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619 495 529 2.3E-178 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF06251 Capsule biosynthesis GfcC 605 800 1.3E-12 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF02563 Polysaccharide biosynthesis/export protein 137 209 2.0E-11 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619 106 462 2.3E-178 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.30.1950.10 145 210 2.1E-9 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF10531 SLBB domain 301 347 7.2E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF10531 SLBB domain 218 264 7.6E-5 T 22-04-2016 IPR019554 Soluble ligand binding domain SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF10531 SLBB domain 386 423 1.6E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Pfam PF10531 SLBB domain 498 541 6.6E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 590 636 3.8E-14 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 374 468 1.7E-13 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 301 373 9.5E-11 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 714 795 1.6E-13 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 687 713 3.8E-14 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 498 581 2.6E-13 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 Gene3D G3DSA:3.10.560.10 211 296 6.8E-20 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619:SF1 495 529 2.3E-178 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619:SF1 106 462 2.3E-178 T 22-04-2016 SAMA_RS11860 fd81cd2748ac598e97cbbeab679fabd8 827 PANTHER PTHR33619 549 822 2.3E-178 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293:SF6 6 158 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293:SF6 178 211 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293:SF6 245 302 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 SUPERFAMILY SSF52402 7 210 7.59E-72 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.2E-160 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293 6 158 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293 178 211 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PANTHER PTHR23293 245 302 2.8E-92 T 22-04-2016 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 PIRSF PIRSF002936 2 302 1.7E-154 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.638 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.3E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 Gene3D G3DSA:3.40.50.620 7 210 6.1E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS15095 b09f76343d9b53c4ff8a7af63cef1a3a 302 Gene3D G3DSA:3.40.50.620 244 253 6.1E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 2.4E-133 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 SUPERFAMILY SSF51735 3 240 2.0E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 Gene3D G3DSA:3.40.50.720 3 240 4.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.2E-56 T 22-04-2016 SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PANTHER PTHR24322 153 184 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PANTHER PTHR24322 7 137 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.9E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.9E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.9E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS17655 60145355304c32e87608bf8a1ab2c3f5 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 175 0.0013 T 22-04-2016 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 PANTHER PTHR11986:SF80 16 445 3.4E-301 T 22-04-2016 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 Gene3D G3DSA:3.40.640.10 69 347 1.4E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 PANTHER PTHR11986 16 445 3.4E-301 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 SUPERFAMILY SSF53383 10 444 7.01E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 Pfam PF00202 Aminotransferase class-III 24 442 2.7E-113 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 Gene3D G3DSA:3.90.1150.10 15 67 2.1E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS13880 b42fa4c8497c80c1c152cb8267dfd6eb 446 Gene3D G3DSA:3.90.1150.10 348 445 2.1E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 PANTHER PTHR30505 1 145 8.1E-68 T 22-04-2016 SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 SUPERFAMILY SSF55804 1 145 4.06E-37 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 PANTHER PTHR30505:SF6 1 145 8.1E-68 T 22-04-2016 SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 145 9.5E-45 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 2.3E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 Gene3D G3DSA:3.40.930.10 1 146 3.5E-41 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS16120 aa468208a1f7d0b131669fde1b2595d5 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 PANTHER PTHR30425:SF7 190 548 1.3E-255 T 22-04-2016 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 PANTHER PTHR30425 190 548 1.3E-255 T 22-04-2016 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 Gene3D G3DSA:1.10.3720.10 285 546 1.0E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 Gene3D G3DSA:1.10.3720.10 23 43 1.0E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 SUPERFAMILY SSF161098 283 532 1.44E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 258 542 2.8E-76 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SAMA_RS07340 5ac0e55c2e7fb584cabe3a569e2d3283 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 318 544 2.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 PANTHER PTHR31964 1 143 3.7E-28 T 22-04-2016 SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 SUPERFAMILY SSF52402 4 143 1.59E-33 T 22-04-2016 SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 Gene3D G3DSA:3.40.50.620 4 143 1.7E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 Pfam PF00582 Universal stress protein family 4 143 1.6E-25 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 PRINTS PR01438 Universal stress protein signature 103 115 4.9E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 PRINTS PR01438 Universal stress protein signature 3 21 4.9E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 PRINTS PR01438 Universal stress protein signature 121 143 4.9E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS14900 f5ba504a40aaff23f47e0beead90898b 143 PANTHER PTHR31964:SF42 1 143 3.7E-28 T 22-04-2016 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 Gene3D G3DSA:3.30.420.100 24 116 1.8E-35 T 22-04-2016 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 116 6.4E-42 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 SUPERFAMILY SSF53137 3 114 3.27E-51 T 22-04-2016 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 116 1.6E-42 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 116 25.16 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01205 dcbdbb51610fa432cd0fc7c5713bb8ce 116 PANTHER PTHR12899 1 116 2.6E-48 T 22-04-2016 SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 Gene3D G3DSA:1.10.3680.10 20 194 5.6E-31 T 22-04-2016 IPR029024 TerB-like SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 Gene3D G3DSA:1.10.287.110 195 252 5.0E-15 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 256 36.124 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 PANTHER PTHR24078:SF319 135 247 3.5E-12 T 22-04-2016 SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 Pfam PF05099 Tellurite resistance protein TerB 36 164 1.1E-16 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 SUPERFAMILY SSF46565 127 254 4.39E-29 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 Pfam PF00226 DnaJ domain 190 254 6.1E-12 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 SMART SM00271 189 254 3.9E-18 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 PANTHER PTHR24078 135 247 3.5E-12 T 22-04-2016 SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 PRINTS PR00625 DnaJ domain signature 210 225 2.2E-10 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 PRINTS PR00625 DnaJ domain signature 234 254 2.2E-10 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS14700 2adcc825a2deefcf75ba1de0f4770ba3 256 PRINTS PR00625 DnaJ domain signature 192 210 2.2E-10 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 5.7E-125 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PANTHER PTHR30531:SF4 1 362 2.9E-222 T 22-04-2016 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 2.0E-121 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 SUPERFAMILY SSF160544 245 352 1.83E-39 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 PANTHER PTHR30531 1 362 2.9E-222 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11960 d0c474a194afe438c3ba639315e5c4cd 377 Gene3D G3DSA:3.40.1690.10 218 358 2.8E-62 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 44 440 1.4E-118 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 622 637 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 556 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 483 501 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 533 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 567 587 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 640 662 2.2E-57 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 Gene3D G3DSA:2.130.10.120 105 444 7.9E-109 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 544 574 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 Pfam PF00326 Prolyl oligopeptidase family 498 711 3.8E-64 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PANTHER PTHR11757:SF2 33 717 0.0 T 22-04-2016 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 SUPERFAMILY SSF50993 34 449 1.88E-94 T 22-04-2016 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 SUPERFAMILY SSF53474 452 710 1.13E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 PANTHER PTHR11757 33 717 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS10935 f863662d53d29f2725c9bded563411b8 718 Gene3D G3DSA:3.40.50.1820 450 710 9.8E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 5.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 7.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 Gene3D G3DSA:1.10.357.10 4 204 2.8E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 SUPERFAMILY SSF48498 85 193 4.05E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 PANTHER PTHR30055:SF42 2 171 3.7E-24 T 22-04-2016 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 SUPERFAMILY SSF46689 6 81 4.05E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS18650 cf6d651249d13ce86699b7f593fcbe7b 213 PANTHER PTHR30055 2 171 3.7E-24 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SUPERFAMILY SSF158472 184 236 4.05E-9 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SUPERFAMILY SSF55874 291 453 1.03E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Gene3D G3DSA:1.10.287.130 229 297 9.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 452 4.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 298 8.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PANTHER PTHR24423:SF564 44 66 7.8E-87 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PANTHER PTHR24423:SF564 177 453 7.8E-87 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SMART SM00388 239 301 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PANTHER PTHR24423 44 66 7.8E-87 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PANTHER PTHR24423 177 453 7.8E-87 T 22-04-2016 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 46 157 5.3E-8 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Pfam PF00672 HAMP domain 165 234 4.5E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 Gene3D G3DSA:3.30.565.10 307 452 3.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SUPERFAMILY SSF47384 222 299 5.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SMART SM00387 345 453 2.2E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17860 c0dec49d4d7c425d14dbb6b018a94616 453 SMART SM00304 183 238 2.8E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PANTHER PTHR24423:SF554 9 430 6.8E-163 T 22-04-2016 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SMART SM00388 205 271 3.6E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Gene3D G3DSA:3.30.565.10 258 425 3.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SMART SM00387 315 427 2.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SMART SM00091 98 164 1.8E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 424 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SUPERFAMILY SSF55785 88 197 9.95E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Pfam PF00989 PAS fold 99 157 3.3E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Pfam PF11808 Domain of unknown function (DUF3329) 8 90 3.1E-28 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SUPERFAMILY SSF55874 260 427 1.44E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 PANTHER PTHR24423 9 430 6.8E-163 T 22-04-2016 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 1.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Gene3D G3DSA:1.10.287.130 197 257 2.8E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 97 422 4.4E-136 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 SUPERFAMILY SSF47384 192 270 9.81E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05635 ed526e22eb8187a269ea5bee8acb7120 434 Gene3D G3DSA:3.30.450.20 99 196 3.4E-8 T 22-04-2016 SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 Gene3D G3DSA:2.60.120.10 9 251 3.3E-57 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 SUPERFAMILY SSF51182 7 280 6.77E-69 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 Pfam PF02678 Pirin 28 118 2.7E-30 T 22-04-2016 IPR003829 Pirin, N-terminal domain SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 Pfam PF05726 Pirin C-terminal cupin domain 178 278 6.6E-24 T 22-04-2016 IPR008778 Pirin, C-terminal domain SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 PIRSF PIRSF006232 1 282 3.3E-76 T 22-04-2016 IPR012093 Pirin SAMA_RS15620 664c3a72b291f2627e4aaf9cdcd8cd27 284 PANTHER PTHR13903 1 278 2.2E-80 T 22-04-2016 IPR012093 Pirin SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 Gene3D G3DSA:3.30.565.10 280 409 5.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 SMART SM00387 298 407 1.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 SUPERFAMILY SSF55874 246 407 3.93E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 Gene3D G3DSA:1.10.287.130 185 252 1.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 404 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 255 1.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 405 2.6E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 SMART SM00388 195 256 7.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PANTHER PTHR24423 4 16 4.0E-40 T 22-04-2016 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 PANTHER PTHR24423 174 410 4.0E-40 T 22-04-2016 SAMA_RS14135 e15cbc82eaeb3bac2f93ecb784243edc 412 SUPERFAMILY SSF47384 180 254 4.71E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10925 8e1d2f77ccd7a158160d1709a0ab21b6 229 PANTHER PTHR30625:SF3 3 228 6.9E-70 T 22-04-2016 SAMA_RS10925 8e1d2f77ccd7a158160d1709a0ab21b6 229 PANTHER PTHR30625 3 228 6.9E-70 T 22-04-2016 SAMA_RS10925 8e1d2f77ccd7a158160d1709a0ab21b6 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 205 5.0E-40 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SAMA_RS10925 8e1d2f77ccd7a158160d1709a0ab21b6 229 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 4.7E-87 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Gene3D G3DSA:3.40.50.1380 5 190 1.6E-85 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 PIRSF PIRSF000414 1 529 6.0E-229 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.525 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 PANTHER PTHR11692:SF2 5 529 0.0 T 22-04-2016 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 SMART SM00798 137 461 1.2E-216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 SMART SM00851 19 132 3.6E-62 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 SUPERFAMILY SSF53927 221 529 1.81E-129 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 7.1E-119 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 8.1E-254 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Gene3D G3DSA:3.40.140.20 253 372 3.0E-48 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Pfam PF02142 MGS-like domain 19 132 5.2E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 SUPERFAMILY SSF52335 7 197 3.14E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 Gene3D G3DSA:3.40.140.20 377 519 1.5E-60 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS02145 55f42635c90f9f7fcb2b7bc166a998b7 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 PANTHER PTHR12220 1 136 6.3E-75 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 SUPERFAMILY SSF54686 3 133 8.9E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 7.6E-58 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 Gene3D G3DSA:3.90.1170.10 23 133 6.1E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.64E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.64E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.64E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.64E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.0E-45 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01160 28221955d044d65b8a56922c3c06024e 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.486 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SAMA_RS02325 3ba5f278da392afbfde2696af83792a2 115 Gene3D G3DSA:2.60.40.420 3 106 2.9E-31 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS02325 3ba5f278da392afbfde2696af83792a2 115 Pfam PF08985 Domain of unknown function (DUF1888) 4 112 8.8E-28 T 22-04-2016 IPR015078 Protein of unknown function DUF1888 SAMA_RS02325 3ba5f278da392afbfde2696af83792a2 115 SUPERFAMILY SSF49503 2 113 7.18E-34 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS02920 9b3e70e0e4f0f979c9ec2b5ecd26cdc0 206 Pfam PF14163 Super-infection exclusion protein B 22 168 5.7E-47 T 22-04-2016 IPR025982 Superinfection exclusion protein B SAMA_RS08555 36d10508a35b0003b8d4cc13a06038e3 137 Gene3D G3DSA:3.40.630.30 15 125 1.6E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS08555 36d10508a35b0003b8d4cc13a06038e3 137 Pfam PF13673 Acetyltransferase (GNAT) domain 35 124 2.5E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS08555 36d10508a35b0003b8d4cc13a06038e3 137 PANTHER PTHR13355 30 131 3.4E-22 T 22-04-2016 SAMA_RS08555 36d10508a35b0003b8d4cc13a06038e3 137 PANTHER PTHR13355:SF5 30 131 3.4E-22 T 22-04-2016 SAMA_RS08555 36d10508a35b0003b8d4cc13a06038e3 137 SUPERFAMILY SSF55729 15 123 3.18E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 SUPERFAMILY SSF56219 756 785 2.75E-36 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 SUPERFAMILY SSF56219 457 725 2.75E-36 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 PANTHER PTHR11371:SF31 1 921 1.5E-281 T 22-04-2016 SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 PANTHER PTHR11371 1 921 1.5E-281 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 Pfam PF00801 PKD domain 794 859 9.6E-12 T 22-04-2016 IPR000601 PKD domain SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 SMART SM00089 791 869 5.4E-14 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 SUPERFAMILY SSF49299 787 866 5.36E-17 T 22-04-2016 IPR000601 PKD domain SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 Pfam PF00932 Lamin Tail Domain 21 127 2.8E-17 T 22-04-2016 IPR001322 Lamin Tail Domain SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 Gene3D G3DSA:3.60.10.10 464 781 1.6E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS07685 1173b0cd27745ce2132d33a6e72e8d3a 947 Gene3D G3DSA:2.60.40.670 788 869 5.2E-18 T 22-04-2016 IPR000601 PKD domain SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 Gene3D G3DSA:3.40.309.10 266 452 2.5E-42 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 PANTHER PTHR11699:SF197 13 461 1.1E-261 T 22-04-2016 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 Pfam PF00171 Aldehyde dehydrogenase family 18 468 2.6E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 12 494 2.6E-245 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 PANTHER PTHR11699 13 461 1.1E-261 T 22-04-2016 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 SUPERFAMILY SSF53720 12 464 3.53E-123 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 10 495 57.865 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 Gene3D G3DSA:3.40.605.10 13 265 4.4E-76 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS08495 be6717e3b32299361d2e8ec87e9e39ea 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 PIRSF PIRSF003085 13 408 7.8E-120 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 PANTHER PTHR10108 339 408 1.5E-109 T 22-04-2016 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 PANTHER PTHR10108 60 318 1.5E-109 T 22-04-2016 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 Gene3D G3DSA:3.40.50.150 126 402 7.4E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 SUPERFAMILY SSF53335 19 358 4.85E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 PANTHER PTHR10108:SF805 339 408 1.5E-109 T 22-04-2016 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 PANTHER PTHR10108:SF805 60 318 1.5E-109 T 22-04-2016 SAMA_RS04275 9c186be92080366be518efbb47a4a04f 409 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 396 4.0E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 SUPERFAMILY SSF55486 188 484 3.11E-86 T 22-04-2016 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 PANTHER PTHR33794 18 484 8.6E-96 T 22-04-2016 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 338 482 1.1E-37 T 22-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 Gene3D G3DSA:1.10.390.10 340 484 8.3E-50 T 22-04-2016 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 197 335 2.8E-39 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 36 76 4.3E-5 T 22-04-2016 IPR011096 FTP domain SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 Gene3D G3DSA:3.10.170.10 189 339 7.3E-49 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 326 342 9.9E-27 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 292 312 9.9E-27 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 347 358 9.9E-27 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS06290 a5742c95590c1b569fe3c4c7367e557f 485 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 409 425 9.9E-27 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 66 5.8E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 SUPERFAMILY SSF46785 1 114 2.88E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 SUPERFAMILY SSF53850 94 291 9.56E-39 T 22-04-2016 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 PANTHER PTHR30346:SF3 1 290 4.9E-89 T 22-04-2016 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 Gene3D G3DSA:3.40.190.10 94 179 7.4E-18 T 22-04-2016 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 Pfam PF03466 LysR substrate binding domain 92 291 8.1E-41 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 PANTHER PTHR30346 1 290 4.9E-89 T 22-04-2016 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 Gene3D G3DSA:3.40.190.10 180 262 1.5E-18 T 22-04-2016 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 Gene3D G3DSA:1.10.10.10 1 90 1.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS11620 0a8efb14b7799bdf64253053e4e8827d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS02480 5a1422efdca06e2563db90d6c93794e7 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 2.0E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02480 5a1422efdca06e2563db90d6c93794e7 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 28 2.3E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02480 5a1422efdca06e2563db90d6c93794e7 163 Gene3D G3DSA:3.30.700.10 11 58 3.8E-6 T 22-04-2016 SAMA_RS02480 5a1422efdca06e2563db90d6c93794e7 163 SUPERFAMILY SSF54523 11 125 7.85E-12 T 22-04-2016 SAMA_RS02480 5a1422efdca06e2563db90d6c93794e7 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Gene3D G3DSA:3.30.1360.10 9 51 9.8E-10 T 22-04-2016 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 SUPERFAMILY SSF56553 53 177 1.96E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 PANTHER PTHR32108 1 329 6.5E-157 T 22-04-2016 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Gene3D G3DSA:1.10.150.20 243 326 1.1E-37 T 22-04-2016 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Gene3D G3DSA:2.170.120.12 53 176 6.9E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 SMART SM00662 23 233 2.1E-107 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 4.9E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 SUPERFAMILY SSF55257 7 53 1.28E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 SUPERFAMILY SSF55257 178 232 1.28E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 PANTHER PTHR32108:SF0 1 329 6.5E-157 T 22-04-2016 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 155 3.4E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 3.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 SUPERFAMILY SSF47789 250 324 1.44E-25 T 22-04-2016 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.6E-110 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01245 acaba6e06c1427c4b1cb5a193bfe91a7 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 Gene3D G3DSA:3.30.1330.90 10 155 2.1E-49 T 22-04-2016 IPR029009 Allosteric substrate binding domain SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 PANTHER PTHR30182:SF5 1 452 1.3E-258 T 22-04-2016 SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 Pfam PF03313 Serine dehydratase alpha chain 182 446 6.3E-97 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 Pfam PF03315 Serine dehydratase beta chain 3 152 8.8E-52 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 PANTHER PTHR30182 1 452 1.3E-258 T 22-04-2016 SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 SUPERFAMILY SSF143548 16 155 9.42E-42 T 22-04-2016 IPR029009 Allosteric substrate binding domain SAMA_RS14490 8600ac550020786ca54b1324f37c6ce4 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 449 1.5E-207 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SAMA_RS07365 6cf7dee31a03035e1fdda9b89b4dab6d 137 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 10 133 1.1E-19 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 SAMA_RS07365 6cf7dee31a03035e1fdda9b89b4dab6d 137 PANTHER PTHR36929:SF1 1 137 1.0E-17 T 22-04-2016 SAMA_RS07365 6cf7dee31a03035e1fdda9b89b4dab6d 137 SUPERFAMILY SSF55961 4 135 5.08E-33 T 22-04-2016 SAMA_RS07365 6cf7dee31a03035e1fdda9b89b4dab6d 137 PANTHER PTHR36929 1 137 1.0E-17 T 22-04-2016 SAMA_RS07365 6cf7dee31a03035e1fdda9b89b4dab6d 137 Gene3D G3DSA:3.30.530.20 4 135 7.3E-24 T 22-04-2016 IPR023393 START-like domain SAMA_RS17325 2d399e71d058a1c337c4ed441070a5cd 129 Pfam PF11756 Nitrous oxide-stimulated promoter 11 112 3.9E-44 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA SAMA_RS17325 2d399e71d058a1c337c4ed441070a5cd 129 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 11 102 5.0E-50 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 PANTHER PTHR22572 121 349 5.1E-121 T 22-04-2016 SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 Gene3D G3DSA:3.90.550.10 122 346 2.5E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 SUPERFAMILY SSF54631 6 56 2.26E-8 T 22-04-2016 SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 Pfam PF00571 CBS domain 6 54 2.1E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 SMART SM00116 6 54 6.5E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 SMART SM00116 70 117 3.5 T 22-04-2016 IPR000644 CBS domain SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 PANTHER PTHR22572:SF114 121 349 5.1E-121 T 22-04-2016 SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 Pfam PF00483 Nucleotidyl transferase 123 346 8.7E-37 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 Gene3D G3DSA:3.10.580.10 1 111 2.6E-24 T 22-04-2016 SAMA_RS12220 7ede15d45577ddaf9dadf9a0c18dd373 352 SUPERFAMILY SSF53448 49 344 5.4E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS13270 cb4f9647d1ea5bcc81890db1fd3efd96 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 1.9E-19 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SAMA_RS13270 cb4f9647d1ea5bcc81890db1fd3efd96 168 PANTHER PTHR35011 8 131 2.7E-23 T 22-04-2016 SAMA_RS13270 cb4f9647d1ea5bcc81890db1fd3efd96 168 PANTHER PTHR35011:SF4 8 131 2.7E-23 T 22-04-2016 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 SMART SM01321 9 124 1.0E-40 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 Gene3D G3DSA:3.30.70.1290 6 127 8.0E-15 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 PANTHER PTHR34322 2 144 4.7E-37 T 22-04-2016 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 Pfam PF01797 Transposase IS200 like 11 122 1.5E-16 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 PANTHER PTHR34322:SF1 2 144 4.7E-37 T 22-04-2016 SAMA_RS16285 54a2ecb420e24aa79dd11d27ac06d2a6 231 SUPERFAMILY SSF143422 2 127 1.96E-33 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 SMART SM00859 6 121 7.2E-43 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 SUPERFAMILY SSF51735 5 159 3.53E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 PANTHER PTHR10174 58 338 1.7E-87 T 22-04-2016 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 Gene3D G3DSA:3.40.50.720 1 143 4.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 PIRSF PIRSF000148 4 338 5.0E-130 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 335 2.3E-131 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 37.592 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.3E-31 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 1.4E-60 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 PANTHER PTHR10174:SF2 58 338 1.7E-87 T 22-04-2016 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 SUPERFAMILY SSF55347 131 321 5.06E-78 T 22-04-2016 SAMA_RS11245 3b873b9a19be7f411c4811f7a123c3a7 338 Gene3D G3DSA:3.30.360.10 144 316 5.5E-82 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PIRSF PIRSF000044 1 405 3.1E-212 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 405 62.334 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 SUPERFAMILY SSF63380 105 270 7.62E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Gene3D G3DSA:2.40.30.10 124 262 1.4E-56 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Pfam PF00175 Oxidoreductase NAD-binding domain 275 383 1.1E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Gene3D G3DSA:3.40.50.80 274 389 2.6E-40 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 SUPERFAMILY SSF54292 38 122 4.85E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 115 4.9E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Pfam PF00970 Oxidoreductase FAD-binding domain 204 264 3.5E-11 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 SUPERFAMILY SSF52343 255 400 2.36E-36 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 Gene3D G3DSA:3.10.20.30 37 120 3.3E-22 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 293 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 240 249 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 312 323 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 309 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 371 379 5.6E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PANTHER PTHR19370:SF32 205 405 1.9E-138 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PANTHER PTHR19370:SF32 62 176 1.9E-138 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PANTHER PTHR19370 205 405 1.9E-138 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 PANTHER PTHR19370 62 176 1.9E-138 T 22-04-2016 SAMA_RS15530 7afa006a43cc8b8715a539dd8336ada8 405 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 405 7.9E-221 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031:SF249 653 687 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SMART SM00487 263 457 1.1E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Pfam PF17191 RecG wedge domain 12 164 7.3E-16 T 22-04-2016 IPR033454 RecG, wedge domain SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031 297 601 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SUPERFAMILY SSF52540 506 651 3.87E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SUPERFAMILY SSF52540 290 340 3.87E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SMART SM00490 503 587 2.4E-22 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Gene3D G3DSA:3.40.50.300 254 451 5.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SUPERFAMILY SSF50249 8 172 6.17E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 662 1.3E-230 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Gene3D G3DSA:3.40.50.300 452 636 2.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031:SF249 17 50 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031:SF249 297 601 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031:SF249 208 280 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Pfam PF00270 DEAD/DEAH box helicase 271 411 2.0E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 SUPERFAMILY SSF52540 213 451 3.19E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Gene3D G3DSA:2.40.50.140 45 138 1.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031 208 280 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031 17 50 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 PANTHER PTHR24031 653 687 4.3E-121 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Gene3D G3DSA:1.10.150.20 4 34 3.1E-5 T 22-04-2016 SAMA_RS17565 267c5b165e9f0663aae5007a5333befc 691 Pfam PF00271 Helicase conserved C-terminal domain 479 586 3.6E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS16695 f9af6d11b72c00798c597b3592b0ff56 77 Pfam PF02416 mttA/Hcf106 family 4 58 1.5E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SAMA_RS16695 f9af6d11b72c00798c597b3592b0ff56 77 PANTHER PTHR33162 1 75 1.1E-19 T 22-04-2016 SAMA_RS16695 f9af6d11b72c00798c597b3592b0ff56 77 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 24.968 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SAMA_RS16695 f9af6d11b72c00798c597b3592b0ff56 77 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.4E-22 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 31 199 5.3E-58 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 PIRSF PIRSF015617 5 199 6.4E-63 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 Gene3D G3DSA:3.40.50.300 6 199 7.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 24 1.1E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 SUPERFAMILY SSF52540 10 199 1.92E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 PANTHER PTHR30069 3 199 2.9E-59 T 22-04-2016 SAMA_RS04025 904aa2c2a1008479cfc81aa13b1ee416 199 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 199 9.8E-69 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 PIRSF PIRSF001423 70 662 1.7E-186 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 ProSitePatterns PS01233 Urocanase signature. 539 554 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 Hamap MF_00577 Urocanate hydratase [hutU]. 59 658 44.836 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 PANTHER PTHR12216 6 670 0.0 T 22-04-2016 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 Pfam PF01175 Urocanase 88 644 8.9E-246 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 SUPERFAMILY SSF111326 88 652 1.1E-224 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 PANTHER PTHR12216:SF3 6 670 0.0 T 22-04-2016 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 Gene3D G3DSA:3.40.1770.10 279 390 2.5E-108 T 22-04-2016 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 Gene3D G3DSA:3.40.1770.10 83 218 1.8E-60 T 22-04-2016 SAMA_RS08525 c657ac3a060de3f8ef21a7576d562340 670 Gene3D G3DSA:3.40.1770.10 427 652 2.5E-108 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 PANTHER PTHR30290:SF28 34 534 3.0E-181 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 Gene3D G3DSA:3.10.105.10 291 502 1.1E-58 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 SUPERFAMILY SSF53850 34 534 2.71E-137 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 Gene3D G3DSA:3.90.76.10 40 220 1.8E-45 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 PANTHER PTHR30290 34 534 3.0E-181 T 22-04-2016 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 PIRSF PIRSF002741 26 539 1.4E-106 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SAMA_RS06475 a309bf880ab2cfec8219e93e68270df5 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 455 1.2E-89 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 1.2E-58 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.129 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 SUPERFAMILY SSF47781 65 135 4.73E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Gene3D G3DSA:1.10.150.20 67 139 6.2E-29 T 22-04-2016 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Pfam PF01330 RuvA N terminal domain 1 62 1.3E-20 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 PANTHER PTHR33796 2 205 5.1E-76 T 22-04-2016 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 8.7E-15 T 22-04-2016 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 SUPERFAMILY SSF50249 1 63 5.6E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Pfam PF07499 RuvA, C-terminal domain 161 204 1.6E-14 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Gene3D G3DSA:2.40.50.140 1 64 6.0E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 Gene3D G3DSA:1.10.8.10 160 204 7.6E-19 T 22-04-2016 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 SMART SM00278 108 127 0.025 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 SMART SM00278 73 92 75.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS09635 2f2b8b3cb32a5b2e2d5e06e15b3ef1eb 205 SUPERFAMILY SSF46929 161 204 7.46E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 466 56.342 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 Pfam PF02335 Cytochrome c552 36 461 1.4E-180 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 PANTHER PTHR30633 10 467 1.1E-139 T 22-04-2016 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 Gene3D G3DSA:1.10.710.10 103 301 1.8E-17 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 32 464 1.2E-216 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 SUPERFAMILY SSF48695 30 461 3.51E-167 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 PIRSF PIRSF000243 13 467 5.2E-134 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS03435 8999c9a5f7fa280a0ef5ad42a7ab55fe 467 Gene3D G3DSA:1.20.140.10 302 435 4.8E-51 T 22-04-2016 SAMA_RS09600 5940ea818e1272a68b7d095547b080d5 348 PANTHER PTHR30578 3 345 2.6E-145 T 22-04-2016 SAMA_RS09600 5940ea818e1272a68b7d095547b080d5 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 345 27.347 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SAMA_RS09600 5940ea818e1272a68b7d095547b080d5 348 Pfam PF03116 NQR2, RnfD, RnfE family 5 343 1.1E-103 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SAMA_RS09600 5940ea818e1272a68b7d095547b080d5 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 344 4.5E-137 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SAMA_RS09600 5940ea818e1272a68b7d095547b080d5 348 PANTHER PTHR30578:SF0 3 345 2.6E-145 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 318 458 7.2E-11 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Gene3D G3DSA:1.20.140.10 306 464 1.4E-23 T 22-04-2016 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 84 191 1.0E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 PANTHER PTHR10909 7 491 3.5E-244 T 22-04-2016 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Gene3D G3DSA:1.10.540.10 53 192 1.7E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 195 292 3.6E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 SUPERFAMILY SSF47203 318 463 1.77E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 SUPERFAMILY SSF56645 79 313 9.03E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 PANTHER PTHR10909:SF283 7 491 3.5E-244 T 22-04-2016 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Pfam PF09317 Domain of unknown function (DUF1974) 472 756 2.3E-110 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 SAMA_RS09470 1a12cf0609c313b71b063a766e0cc1ae 759 Gene3D G3DSA:2.40.110.10 195 305 2.3E-17 T 22-04-2016 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Gene3D G3DSA:3.40.50.80 191 322 2.7E-16 T 22-04-2016 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Pfam PF00175 Oxidoreductase NAD-binding domain 196 302 1.2E-4 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Pfam PF00970 Oxidoreductase FAD-binding domain 94 184 3.0E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 SUPERFAMILY SSF54292 3 88 9.96E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 76 1.3E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 SUPERFAMILY SSF52343 190 322 4.71E-17 T 22-04-2016 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Gene3D G3DSA:3.10.20.30 8 89 1.5E-17 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 SUPERFAMILY SSF63380 89 182 1.61E-15 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS11015 69e6f694e8987044541e272dbec2f19d 336 Gene3D G3DSA:2.40.30.10 90 181 1.0E-12 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 SUPERFAMILY SSF51905 14 67 8.29E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 SUPERFAMILY SSF51905 126 276 8.29E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 SUPERFAMILY SSF51905 366 422 8.29E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.50.50.60 366 422 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.50.50.60 198 275 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.50.50.60 13 69 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.50.50.60 119 141 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 PANTHER PTHR13847 118 423 3.7E-56 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 PANTHER PTHR13847 13 71 3.7E-56 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 PANTHER PTHR13847:SF216 118 423 3.7E-56 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 PANTHER PTHR13847:SF216 13 71 3.7E-56 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 SUPERFAMILY SSF54373 278 366 3.27E-11 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Pfam PF01266 FAD dependent oxidoreductase 15 403 1.4E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.30.9.10 146 197 2.0E-6 T 22-04-2016 SAMA_RS07970 38e50a5301adcef4d6fd8f492f1d5dd2 423 Gene3D G3DSA:3.30.9.10 295 306 2.0E-6 T 22-04-2016 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PANTHER PTHR10458:SF4 8 158 3.0E-59 T 22-04-2016 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PIRSF PIRSF004749 1 172 1.1E-48 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 12 164 4.4E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 Gene3D G3DSA:3.90.45.10 8 166 1.7E-51 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 Pfam PF01327 Polypeptide deformylase 8 159 3.8E-46 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PRINTS PR01576 Peptide deformylase signature 112 130 3.9E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PRINTS PR01576 Peptide deformylase signature 131 160 3.9E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PRINTS PR01576 Peptide deformylase signature 36 65 3.9E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PRINTS PR01576 Peptide deformylase signature 100 111 3.9E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 Hamap MF_00163 Peptide deformylase [def]. 5 167 25.648 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 PANTHER PTHR10458 8 158 3.0E-59 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS03390 06c64bc5310b1443c7b9225fa58e87a8 174 SUPERFAMILY SSF56420 7 163 3.27E-52 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 SUPERFAMILY SSF48452 56 85 7.37E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 SUPERFAMILY SSF48452 120 152 7.37E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 SUPERFAMILY SSF48452 192 248 7.37E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 Gene3D G3DSA:1.25.40.10 191 243 1.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 Gene3D G3DSA:1.25.40.10 119 151 1.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03385 7bf74bf8ff7d0a220ffa9e5177779f57 451 Gene3D G3DSA:1.25.40.10 56 84 1.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 459 478 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 497 508 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 551 559 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 390 397 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 484 493 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 284 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 528 544 6.4E-26 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 602 6.1E-244 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00369 Flavodoxin signature 169 188 2.5E-15 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00369 Flavodoxin signature 113 124 2.5E-15 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00369 Flavodoxin signature 65 78 2.5E-15 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PRINTS PR00369 Flavodoxin signature 145 155 2.5E-15 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Pfam PF00258 Flavodoxin 66 189 2.5E-29 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PANTHER PTHR19384:SF76 57 602 1.2E-191 T 22-04-2016 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Gene3D G3DSA:2.40.30.10 233 283 7.0E-36 T 22-04-2016 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Gene3D G3DSA:2.40.30.10 389 447 7.0E-36 T 22-04-2016 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Pfam PF00667 FAD binding domain 235 427 6.8E-26 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PANTHER PTHR19384 57 602 1.2E-191 T 22-04-2016 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 SUPERFAMILY SSF63380 233 450 7.33E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Gene3D G3DSA:3.40.50.360 57 205 1.6E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Gene3D G3DSA:1.20.990.10 284 388 6.5E-32 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 PIRSF PIRSF000207 1 602 3.1E-249 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Pfam PF00175 Oxidoreductase NAD-binding domain 460 566 8.1E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 SUPERFAMILY SSF52343 448 602 2.75E-48 T 22-04-2016 SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 SUPERFAMILY SSF52218 63 205 2.59E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14830 0cc3bd2cdf157265a81edd213181e20c 602 Gene3D G3DSA:3.40.50.80 452 601 4.2E-56 T 22-04-2016 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SMART SM01018 674 757 5.8E-46 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Gene3D G3DSA:3.40.50.280 761 910 9.3E-58 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Gene3D G3DSA:1.10.1240.10 667 754 9.4E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 TIGRFAM TIGR02082 metH: methionine synthase 26 1211 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Gene3D G3DSA:3.20.20.330 14 375 1.4E-123 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SUPERFAMILY SSF82282 21 411 1.24E-116 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SUPERFAMILY SSF52242 761 909 5.23E-43 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 PIRSF PIRSF000381 14 1214 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SUPERFAMILY SSF47644 669 756 2.62E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Pfam PF02310 B12 binding domain 765 854 1.2E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Pfam PF02607 B12 binding domain 677 749 5.6E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 956 1227 7.8E-125 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 PANTHER PTHR21091 17 414 1.1E-174 T 22-04-2016 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SUPERFAMILY SSF51717 368 634 2.35E-89 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Pfam PF02574 Homocysteine S-methyltransferase 30 337 1.1E-91 T 22-04-2016 IPR003726 Homocysteine-binding domain SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Gene3D G3DSA:3.10.196.10 975 1246 1.6E-111 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Gene3D G3DSA:3.20.20.20 376 634 2.4E-113 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 PANTHER PTHR21091:SF111 17 414 1.1E-174 T 22-04-2016 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 Pfam PF00809 Pterin binding enzyme 372 610 3.5E-60 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SAMA_RS03985 70f4fe374bef59b047de1958221e9179 1246 SUPERFAMILY SSF56507 918 1246 1.06E-134 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 Pfam PF02613 Nitrate reductase delta subunit 56 202 1.7E-29 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 Hamap MF_01150 Chaperone protein TorD [torD]. 11 233 28.384 T 22-04-2016 IPR023069 Chaperone TorD SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 PANTHER PTHR34227 10 115 2.1E-37 T 22-04-2016 SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 PANTHER PTHR34227 136 233 2.1E-37 T 22-04-2016 SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 PANTHER PTHR34227:SF1 10 115 2.1E-37 T 22-04-2016 SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 PANTHER PTHR34227:SF1 136 233 2.1E-37 T 22-04-2016 SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 SUPERFAMILY SSF89155 14 233 1.7E-37 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS05150 4bcc5906b57c9edf44bb72e0d3cf9e88 235 Gene3D G3DSA:1.10.3480.10 15 233 5.6E-35 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 Pfam PF04055 Radical SAM superfamily 24 177 1.2E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 1.2E-104 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 9.1E-20 T 22-04-2016 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 PANTHER PTHR30352:SF9 1 246 6.6E-137 T 22-04-2016 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 Gene3D G3DSA:3.80.30.10 69 245 1.3E-69 T 22-04-2016 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 PANTHER PTHR30352 1 246 6.6E-137 T 22-04-2016 SAMA_RS07790 d95dc6380c41362bd7b72bf9317c81d6 246 SUPERFAMILY SSF102114 23 218 2.35E-23 T 22-04-2016 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 PANTHER PTHR10134 1 194 1.4E-121 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.2E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.2E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.2E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 3.9E-15 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 Gene3D G3DSA:2.102.10.10 7 191 1.3E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 PANTHER PTHR10134:SF8 1 194 1.4E-121 T 22-04-2016 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 Pfam PF00355 Rieske [2Fe-2S] domain 56 176 6.6E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 5.7E-73 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SAMA_RS15755 6a2974e03f32d6d314370f58398f42d7 196 SUPERFAMILY SSF50022 30 189 3.93E-45 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 SUPERFAMILY SSF53223 9 160 7.91E-50 T 22-04-2016 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 Pfam PF03949 Malic enzyme, NAD binding domain 164 370 9.2E-26 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 Pfam PF00390 Malic enzyme, N-terminal domain 19 115 1.0E-19 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 SUPERFAMILY SSF51735 162 411 1.07E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 Gene3D G3DSA:3.40.50.10380 6 159 2.3E-47 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 SMART SM00919 162 399 1.4E-140 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 PANTHER PTHR23406 33 353 1.7E-155 T 22-04-2016 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 PANTHER PTHR23406 371 409 1.7E-155 T 22-04-2016 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 SMART SM01274 17 150 9.0E-71 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SAMA_RS02410 62b34af44d4459ed0e526ffe82a72770 415 Gene3D G3DSA:3.40.50.720 160 412 7.7E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 PANTHER PTHR33121:SF10 395 627 1.3E-38 T 22-04-2016 SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 Gene3D G3DSA:3.20.20.450 391 629 4.1E-49 T 22-04-2016 IPR001633 EAL domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 PANTHER PTHR33121 395 627 1.3E-38 T 22-04-2016 SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 SMART SM00267 209 377 2.1E-7 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 SUPERFAMILY SSF141868 395 629 1.83E-53 T 22-04-2016 IPR001633 EAL domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 Pfam PF00563 EAL domain 396 625 2.6E-51 T 22-04-2016 IPR001633 EAL domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 Gene3D G3DSA:3.30.70.270 222 379 9.1E-15 T 22-04-2016 SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 SUPERFAMILY SSF55073 226 377 5.02E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 SMART SM00052 387 630 1.1E-25 T 22-04-2016 IPR001633 EAL domain SAMA_RS09580 bc5f7bb5564348137ab1125d05daaf25 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 372 5.2E-11 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 SUPERFAMILY SSF47917 383 511 3.4E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.273 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 SUPERFAMILY SSF50615 10 94 8.04E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 SUPERFAMILY SSF52540 96 381 9.84E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.2E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 PANTHER PTHR15184 1 496 5.0E-291 T 22-04-2016 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.7E-12 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Gene3D G3DSA:1.20.150.20 383 510 2.1E-48 T 22-04-2016 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Gene3D G3DSA:3.40.50.300 94 382 2.8E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Gene3D G3DSA:2.40.30.20 1 93 1.7E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 PANTHER PTHR15184:SF3 1 496 5.0E-291 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.9E-72 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS18955 6fc446924aec8e930877b4878798135c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.9E-257 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 90 4.9E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 PANTHER PTHR33231 1 115 6.3E-46 T 22-04-2016 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 SUPERFAMILY SSF69754 2 104 1.7E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 2 97 2.3E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 PANTHER PTHR33231:SF3 1 115 6.3E-46 T 22-04-2016 SAMA_RS04695 c783c4cf821374ae45c9e82e005d9a9b 118 Gene3D G3DSA:3.30.160.100 2 90 5.0E-25 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 PANTHER PTHR34183:SF1 11 274 9.0E-97 T 22-04-2016 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 SUPERFAMILY SSF50685 83 181 3.98E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 SUPERFAMILY SSF110997 199 271 3.53E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 Gene3D G3DSA:3.30.70.1070 198 267 9.1E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 Pfam PF03330 Lytic transglycolase 93 181 8.6E-27 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 Pfam PF05036 Sporulation related domain 200 271 2.1E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 PANTHER PTHR34183 11 274 9.0E-97 T 22-04-2016 SAMA_RS13535 df2a5f3734ccc62390013ac410278164 276 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 94 264 1.0E-46 T 22-04-2016 IPR012997 Rare lipoprotein A SAMA_RS13460 c77410c8655c7386802183d091ca9b6c 356 Gene3D G3DSA:3.40.50.300 118 321 7.0E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13460 c77410c8655c7386802183d091ca9b6c 356 PANTHER PTHR30473 2 344 1.4E-198 T 22-04-2016 SAMA_RS13460 c77410c8655c7386802183d091ca9b6c 356 PANTHER PTHR30473:SF1 2 344 1.4E-198 T 22-04-2016 SAMA_RS13460 c77410c8655c7386802183d091ca9b6c 356 SUPERFAMILY SSF52540 117 293 1.25E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13460 c77410c8655c7386802183d091ca9b6c 356 Pfam PF02562 PhoH-like protein 118 321 1.2E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 PANTHER PTHR11061:SF12 5 396 4.2E-116 T 22-04-2016 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 Gene3D G3DSA:3.30.750.80 74 179 2.0E-34 T 22-04-2016 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 Gene3D G3DSA:3.40.50.150 184 395 1.3E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 Gene3D G3DSA:2.30.130.10 4 72 1.4E-26 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 SUPERFAMILY SSF53335 79 392 7.12E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 PANTHER PTHR11061 5 396 4.2E-116 T 22-04-2016 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 373 2.3E-24 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 SUPERFAMILY SSF88697 4 72 1.37E-16 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.578 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS15475 d7882cb230ac145064ad83d1f8486dbe 396 SMART SM00359 3 88 2.5E-11 T 22-04-2016 IPR002478 PUA domain GO:0003723 SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 Gene3D G3DSA:3.90.1150.10 280 404 1.4E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 PANTHER PTHR11751 9 404 2.7E-186 T 22-04-2016 SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 PANTHER PTHR11751:SF303 9 404 2.7E-186 T 22-04-2016 SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 SUPERFAMILY SSF53383 4 402 1.02E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 Pfam PF00155 Aminotransferase class I and II 36 394 1.9E-49 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS08855 b318d7d7c85a759afb19f5f93c82ba8e 404 Gene3D G3DSA:3.40.640.10 51 279 7.4E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 Gene3D G3DSA:3.30.70.1290 135 189 9.4E-7 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 Gene3D G3DSA:3.30.70.1290 43 82 9.4E-7 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 PANTHER PTHR34322:SF2 3 329 5.5E-177 T 22-04-2016 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 SMART SM01321 12 187 6.2E-4 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 SUPERFAMILY SSF143422 16 81 1.1E-18 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 SUPERFAMILY SSF143422 134 192 1.1E-18 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15175 d937e8ab1e850af411615611ba30fd13 329 PANTHER PTHR34322 3 329 5.5E-177 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 SUPERFAMILY SSF74653 299 372 3.27E-20 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 PANTHER PTHR34978 82 282 9.4E-28 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 Gene3D G3DSA:3.30.1150.10 301 367 1.0E-5 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 304 373 4.2E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 Pfam PF05569 BlaR1 peptidase M56 78 258 2.5E-41 T 22-04-2016 IPR008756 Peptidase M56 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 Gene3D G3DSA:3.30.2010.10 134 179 9.8E-4 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 305 369 4.9E-12 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 PANTHER PTHR34978:SF2 82 282 9.4E-28 T 22-04-2016 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 PRINTS PR01374 Gram-negative bacterial tonB protein signature 320 338 5.4E-8 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 PRINTS PR01374 Gram-negative bacterial tonB protein signature 299 320 5.4E-8 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS17400 1c831af05943eb8750c42765a3f905e1 403 PRINTS PR01374 Gram-negative bacterial tonB protein signature 339 356 5.4E-8 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 SUPERFAMILY SSF74942 84 151 2.35E-15 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 PANTHER PTHR33867:SF1 1 151 2.9E-58 T 22-04-2016 SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 1.4E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 Gene3D G3DSA:3.30.300.70 3 80 7.3E-34 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 PANTHER PTHR33867 1 151 2.9E-58 T 22-04-2016 SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 Gene3D G3DSA:2.30.30.180 88 147 4.3E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.038 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SAMA_RS05020 a659df26ca8dc5bbd4dbe6441850b738 151 SUPERFAMILY SSF75420 3 83 6.28E-27 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SAMA_RS10995 8269f4b0a6ff5b9cbfda9f3c7798ccf0 113 SUPERFAMILY SSF55331 2 111 2.6E-30 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily SAMA_RS10995 8269f4b0a6ff5b9cbfda9f3c7798ccf0 113 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 92 9.2E-6 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 SAMA_RS10995 8269f4b0a6ff5b9cbfda9f3c7798ccf0 113 PANTHER PTHR37950:SF1 2 111 1.6E-18 T 22-04-2016 SAMA_RS10995 8269f4b0a6ff5b9cbfda9f3c7798ccf0 113 PANTHER PTHR37950 2 111 1.6E-18 T 22-04-2016 SAMA_RS10995 8269f4b0a6ff5b9cbfda9f3c7798ccf0 113 Gene3D G3DSA:3.30.429.10 2 111 3.8E-31 T 22-04-2016 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 7.6E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 7.6E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 7.6E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 7.6E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 7.6E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 SUPERFAMILY SSF53335 118 402 2.01E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 388 4.6E-42 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PANTHER PTHR22807 110 402 2.8E-146 T 22-04-2016 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 Gene3D G3DSA:3.30.70.1170 155 208 6.1E-10 T 22-04-2016 SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 Gene3D G3DSA:3.40.50.150 211 401 4.8E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08690 8b1e9399070882431f4260302ec1b74c 404 PANTHER PTHR22807:SF33 110 402 2.8E-146 T 22-04-2016 SAMA_RS11080 d520150905e338d4310a942a08230c85 826 SUPERFAMILY SSF53474 555 629 4.61E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11080 d520150905e338d4310a942a08230c85 826 SUPERFAMILY SSF53474 446 498 4.61E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11080 d520150905e338d4310a942a08230c85 826 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 2.4E-49 T 22-04-2016 IPR025920 Bacterial virulence factor lipase, N-terminal domain SAMA_RS11080 d520150905e338d4310a942a08230c85 826 Gene3D G3DSA:3.40.50.1820 443 508 4.8E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11080 d520150905e338d4310a942a08230c85 826 Gene3D G3DSA:3.40.50.1820 542 662 4.8E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11080 d520150905e338d4310a942a08230c85 826 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 806 1.4E-279 T 22-04-2016 IPR020009 Extracellular lipase, Pla-1/cef family SAMA_RS15315 c21831ce73b8212fcb8bfbb17c118eef 216 Pfam PF12339 DNA-J related protein 24 146 1.8E-36 T 22-04-2016 IPR021059 DnaJ-related protein, N-terminal SAMA_RS15315 c21831ce73b8212fcb8bfbb17c118eef 216 SMART SM00271 160 215 1.4E-12 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS15315 c21831ce73b8212fcb8bfbb17c118eef 216 Pfam PF00226 DnaJ domain 165 211 1.5E-10 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS15315 c21831ce73b8212fcb8bfbb17c118eef 216 SUPERFAMILY SSF46565 153 210 4.32E-14 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS15315 c21831ce73b8212fcb8bfbb17c118eef 216 Gene3D G3DSA:1.10.287.110 162 210 9.9E-13 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 PANTHER PTHR11804 3 676 0.0 T 22-04-2016 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 Gene3D G3DSA:1.20.1050.40 10 137 4.0E-22 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 Gene3D G3DSA:1.10.1370.10 503 677 1.6E-139 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 Gene3D G3DSA:1.10.1370.10 139 348 1.6E-139 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 PANTHER PTHR11804:SF8 3 676 0.0 T 22-04-2016 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 Gene3D G3DSA:3.40.390.10 358 502 7.6E-59 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 SUPERFAMILY SSF55486 1 675 3.98E-209 T 22-04-2016 SAMA_RS18430 b94d50ca4fabbf6547efd669b22b38e2 678 Pfam PF01432 Peptidase family M3 221 675 3.6E-158 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SAMA_RS17840 1f0a81d9cb0aa9a3ab7fe9203eef778b 189 Pfam PF13505 Outer membrane protein beta-barrel domain 7 189 2.2E-27 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SAMA_RS17840 1f0a81d9cb0aa9a3ab7fe9203eef778b 189 SUPERFAMILY SSF56925 23 189 9.16E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS17840 1f0a81d9cb0aa9a3ab7fe9203eef778b 189 Gene3D G3DSA:2.40.160.20 10 189 6.4E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS13330 a075e0ff6ac63b51f25ebeb01c9cae29 466 SUPERFAMILY SSF103473 16 458 4.58E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS13330 a075e0ff6ac63b51f25ebeb01c9cae29 466 Pfam PF07690 Major Facilitator Superfamily 27 406 3.0E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS13330 a075e0ff6ac63b51f25ebeb01c9cae29 466 Gene3D G3DSA:1.20.1250.20 19 223 2.3E-12 T 22-04-2016 SAMA_RS13330 a075e0ff6ac63b51f25ebeb01c9cae29 466 Gene3D G3DSA:1.20.1250.20 269 458 6.8E-13 T 22-04-2016 SAMA_RS13330 a075e0ff6ac63b51f25ebeb01c9cae29 466 PANTHER PTHR12778 12 446 5.7E-96 T 22-04-2016 SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 Pfam PF01571 Aminomethyltransferase folate-binding domain 26 150 1.6E-12 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 PANTHER PTHR22602:SF0 10 305 1.7E-58 T 22-04-2016 SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 PANTHER PTHR22602 10 305 1.7E-58 T 22-04-2016 SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 182 244 6.4E-27 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 Gene3D G3DSA:3.30.70.1400 28 111 1.1E-28 T 22-04-2016 SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 SUPERFAMILY SSF101790 237 318 2.29E-18 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SAMA_RS15400 21a686189befc1fb1cc3db25f51105a3 321 SUPERFAMILY SSF103025 7 235 1.24E-59 T 22-04-2016 SAMA_RS07455 bc4472a9379c59b15b6971cf75fd666c 166 PANTHER PTHR13256 1 147 2.2E-44 T 22-04-2016 SAMA_RS07455 bc4472a9379c59b15b6971cf75fd666c 166 SUPERFAMILY SSF55729 2 148 3.49E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07455 bc4472a9379c59b15b6971cf75fd666c 166 Gene3D G3DSA:3.40.630.30 2 162 4.7E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07455 bc4472a9379c59b15b6971cf75fd666c 166 PANTHER PTHR13256:SF34 1 147 2.2E-44 T 22-04-2016 SAMA_RS07455 bc4472a9379c59b15b6971cf75fd666c 166 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 3.2E-24 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.0E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Pfam PF02824 TGS domain 403 462 4.7E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Pfam PF13291 ACT domain 656 733 6.8E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Gene3D G3DSA:3.30.460.10 193 339 2.1E-49 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 SMART SM00954 250 360 9.5E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 SUPERFAMILY SSF55021 659 733 6.25E-11 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 SUPERFAMILY SSF81301 195 407 5.72E-64 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 SUPERFAMILY SSF109604 13 206 5.65E-45 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Gene3D G3DSA:3.10.20.30 403 465 3.2E-24 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 PANTHER PTHR21262:SF5 1 734 0.0 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Gene3D G3DSA:3.30.70.260 656 732 2.9E-23 T 22-04-2016 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 Pfam PF13328 HD domain 47 190 1.2E-36 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 732 6.2E-189 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 SUPERFAMILY SSF81271 396 463 2.03E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SAMA_RS05385 fe34f8a4dd3de90d8b92a04f7d64d6d8 734 PANTHER PTHR21262 1 734 0.0 T 22-04-2016 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 SMART SM00420 9 61 4.6E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 Gene3D G3DSA:1.10.10.10 4 58 1.8E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 Gene3D G3DSA:3.40.50.1360 80 225 2.2E-14 T 22-04-2016 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 PANTHER PTHR30363:SF11 3 258 4.0E-85 T 22-04-2016 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 PANTHER PTHR30363 3 258 4.0E-85 T 22-04-2016 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 Pfam PF00455 DeoR C terminal sensor domain 81 236 3.9E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 SUPERFAMILY SSF100950 79 240 1.0E-30 T 22-04-2016 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 Pfam PF08220 DeoR-like helix-turn-helix domain 9 63 9.3E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 SUPERFAMILY SSF46785 8 61 3.85E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06250 03fd2603af8e786306033236e9a8cacc 260 SMART SM01134 76 237 1.1E-66 T 22-04-2016 SAMA_RS06585 4b38bc65519d98d27e245bd7f4b8acd5 134 PANTHER PTHR30558:SF3 11 134 1.4E-25 T 22-04-2016 SAMA_RS06585 4b38bc65519d98d27e245bd7f4b8acd5 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 129 3.6E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SAMA_RS06585 4b38bc65519d98d27e245bd7f4b8acd5 134 PANTHER PTHR30558 11 134 1.4E-25 T 22-04-2016 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 10 146 9.9E-47 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 350 1.4E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 354 6.2E-109 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 9 359 37.361 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 PANTHER PTHR21015:SF22 8 360 1.2E-129 T 22-04-2016 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 PANTHER PTHR21015 8 360 1.2E-129 T 22-04-2016 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 Gene3D G3DSA:3.40.50.2000 6 196 5.1E-74 T 22-04-2016 SAMA_RS01890 3954e896a641a3894f31d18ee27797fb 360 SUPERFAMILY SSF53756 7 359 5.06E-122 T 22-04-2016 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 298 9.8E-49 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 300 2.9E-105 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 43 57 2.8E-25 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 2.8E-25 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 2.8E-25 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 76 89 2.8E-25 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 116 130 2.8E-25 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 301 70.586 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 Gene3D G3DSA:3.40.50.1370 138 287 8.1E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 1.6E-21 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 2.4E-44 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PANTHER PTHR11405:SF1 1 301 4.5E-131 T 22-04-2016 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 PANTHER PTHR11405 1 301 4.5E-131 T 22-04-2016 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 Gene3D G3DSA:3.40.50.1370 1 137 1.5E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS01395 9d0c1b8ed28ab9503bed31853fd4b085 301 SUPERFAMILY SSF53671 1 301 1.11E-94 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 Pfam PF01967 MoaC family 16 151 1.0E-56 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 Gene3D G3DSA:3.30.70.640 4 157 1.5E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 PANTHER PTHR22960 2 158 3.0E-105 T 22-04-2016 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 SUPERFAMILY SSF55040 12 156 2.75E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 1.7E-70 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SAMA_RS18330 b99e9e0eb274ca542c68e8fdb5dc5e99 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 3 158 35.23 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.9E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 Gene3D G3DSA:3.30.1340.10 1 81 1.7E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 PANTHER PTHR33705 1 81 2.5E-31 T 22-04-2016 SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 2.6E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 PANTHER PTHR33705:SF1 1 81 2.5E-31 T 22-04-2016 SAMA_RS08625 155d745e4e088e07a1c92d1e635a6e64 85 SUPERFAMILY SSF55594 1 81 3.01E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS00580 894ded074061386d5ee738c641e33e14 334 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 35 285 1.0E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS00580 894ded074061386d5ee738c641e33e14 334 PANTHER PTHR16320 21 334 5.6E-28 T 22-04-2016 SAMA_RS00580 894ded074061386d5ee738c641e33e14 334 PANTHER PTHR16320:SF4 21 334 5.6E-28 T 22-04-2016 SAMA_RS00580 894ded074061386d5ee738c641e33e14 334 Gene3D G3DSA:3.60.10.10 27 331 2.7E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS00580 894ded074061386d5ee738c641e33e14 334 SUPERFAMILY SSF56219 22 331 3.6E-51 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 PANTHER PTHR11206 3 460 1.5E-113 T 22-04-2016 SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 404 3.2E-52 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 Pfam PF01554 MatE 28 182 1.4E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 Pfam PF01554 MatE 241 398 1.7E-18 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 PANTHER PTHR11206:SF132 3 460 1.5E-113 T 22-04-2016 SAMA_RS11035 60b6c0ba160cbd6c817c4c87c166c709 505 PIRSF PIRSF006603 1 447 5.9E-76 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS14335 6de9e78b10d91943ab31ab2afcb450f3 445 PANTHER PTHR30588 7 439 2.8E-187 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SAMA_RS14335 6de9e78b10d91943ab31ab2afcb450f3 445 Pfam PF05525 Branched-chain amino acid transport protein 13 439 7.3E-139 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SAMA_RS14335 6de9e78b10d91943ab31ab2afcb450f3 445 PANTHER PTHR30588:SF0 7 439 2.8E-187 T 22-04-2016 SAMA_RS14335 6de9e78b10d91943ab31ab2afcb450f3 445 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 19 426 3.0E-127 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 SUPERFAMILY SSF52540 614 914 1.82E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:1.20.1580.10 91 129 1.2E-51 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:1.20.1580.10 251 284 1.2E-51 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:1.20.1580.10 407 477 1.2E-51 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:1.20.1580.10 694 820 4.1E-55 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.646 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.30.1490.20 200 249 2.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.30.1490.20 130 153 2.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:1.10.8.280 286 406 1.1E-41 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 SUPERFAMILY SSF52540 3 204 1.33E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 SUPERFAMILY SSF52540 430 569 1.33E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 PANTHER PTHR32282:SF2 1 942 0.0 T 22-04-2016 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.40.50.300 609 692 5.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.40.50.300 821 938 5.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.40.50.300 478 597 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Gene3D G3DSA:3.40.50.300 2 51 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 Pfam PF00005 ABC transporter 806 860 2.3E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS02750 c3a60b824327421737d78eb226c5dfdb 942 PANTHER PTHR32282 1 942 0.0 T 22-04-2016 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 SUPERFAMILY SSF47413 10 86 2.06E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 PANTHER PTHR10245 9 88 3.1E-12 T 22-04-2016 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 Pfam PF12268 Protein of unknown function (DUF3612) 326 500 9.9E-106 T 22-04-2016 IPR022055 Protein of unknown function DUF3612 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 SMART SM00530 17 79 2.1E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 Gene3D G3DSA:1.10.260.40 14 100 2.2E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 Pfam PF12844 Helix-turn-helix domain 15 83 1.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS03590 545e8c2f3cc5b1d839e6ecf4e096de97 504 Pfam PF06114 Domain of unknown function (DUF955) 179 325 1.1E-5 T 22-04-2016 IPR010359 HTH domain, IrrE-type SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Pfam PF00270 DEAD/DEAH box helicase 30 196 3.5E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 SMART SM00487 25 223 6.1E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 SUPERFAMILY SSF52540 74 361 8.22E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Gene3D G3DSA:3.40.50.300 213 373 1.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031 539 620 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031 401 453 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031 1 381 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 567 45.487 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031:SF316 539 620 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031:SF316 401 453 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 PANTHER PTHR24031:SF316 1 381 6.4E-222 T 22-04-2016 SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Gene3D G3DSA:3.40.50.300 4 212 1.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Pfam PF00271 Helicase conserved C-terminal domain 232 340 8.3E-30 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 SMART SM00490 259 340 5.6E-33 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS02740 1e0fe4b021b68549dc4b7ae6c8f557b8 637 Pfam PF03880 DbpA RNA binding domain 495 565 1.6E-21 T 22-04-2016 IPR005580 DbpA, RNA-binding domain SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 SUPERFAMILY SSF54637 5 114 1.23E-37 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 PANTHER PTHR11066:SF34 5 289 9.9E-114 T 22-04-2016 SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 SUPERFAMILY SSF54637 116 285 3.42E-61 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 PANTHER PTHR11066 5 289 9.9E-114 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 Gene3D G3DSA:3.10.129.10 5 115 7.8E-45 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 Gene3D G3DSA:3.10.129.10 124 285 1.2E-56 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 Pfam PF13622 Thioesterase-like superfamily 32 282 1.5E-60 T 22-04-2016 SAMA_RS07135 92ea5be82c7593c6378b6e3b2f2ef7eb 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.2E-90 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 98 428 2.9E-65 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 Gene3D G3DSA:1.20.1250.20 21 218 6.5E-15 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 Pfam PF07690 Major Facilitator Superfamily 22 395 1.7E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514:SF10 346 436 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514:SF10 195 328 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514:SF10 11 176 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514 346 436 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514 195 328 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 PANTHER PTHR23514 11 176 2.6E-142 T 22-04-2016 SAMA_RS04945 15a0b8a6202c614078ce57167d093044 439 SUPERFAMILY SSF103473 8 430 1.96E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS18160 e9a958ae09c26faf8ffa17a55478cdb0 211 PANTHER PTHR12151:SF0 3 210 3.5E-51 T 22-04-2016 SAMA_RS18160 e9a958ae09c26faf8ffa17a55478cdb0 211 Pfam PF02630 SCO1/SenC 50 179 1.5E-33 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SAMA_RS18160 e9a958ae09c26faf8ffa17a55478cdb0 211 SUPERFAMILY SSF52833 45 188 2.65E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18160 e9a958ae09c26faf8ffa17a55478cdb0 211 Gene3D G3DSA:3.40.30.10 7 191 1.8E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18160 e9a958ae09c26faf8ffa17a55478cdb0 211 PANTHER PTHR12151 3 210 3.5E-51 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 Gene3D G3DSA:3.40.50.20 5 74 6.6E-17 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 SUPERFAMILY SSF51246 283 358 1.96E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 330 31.141 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 PANTHER PTHR11609 1 325 5.4E-95 T 22-04-2016 SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 SUPERFAMILY SSF52440 5 78 2.88E-12 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 SUPERFAMILY SSF56059 84 279 8.49E-55 T 22-04-2016 SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 Pfam PF02222 ATP-grasp domain 93 258 1.6E-47 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 Gene3D G3DSA:3.30.470.20 125 354 3.6E-72 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS05575 82562b66cb77c95f2a4b7a6e89460e38 361 PANTHER PTHR11609:SF5 1 325 5.4E-95 T 22-04-2016 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.128 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 SUPERFAMILY SSF52161 1 140 2.09E-61 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 Gene3D G3DSA:3.90.1180.10 3 141 5.9E-66 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 PANTHER PTHR11545 1 142 1.9E-79 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 PIRSF PIRSF002181 1 142 2.9E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 Pfam PF00572 Ribosomal protein L13 15 138 2.2E-58 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SAMA_RS16025 0134fc3935f8514e6ea165bb1e3bf0e2 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.8E-65 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SAMA_RS05925 775d5dcdf7ebd4969d4ab255bded17cc 112 Gene3D G3DSA:1.20.1440.40 10 109 2.7E-32 T 22-04-2016 IPR023376 YqcC-like domain SAMA_RS05925 775d5dcdf7ebd4969d4ab255bded17cc 112 Pfam PF04287 tRNA pseudouridine synthase C 14 107 1.5E-29 T 22-04-2016 IPR023376 YqcC-like domain SAMA_RS05925 775d5dcdf7ebd4969d4ab255bded17cc 112 SUPERFAMILY SSF158452 11 111 6.41E-32 T 22-04-2016 IPR023376 YqcC-like domain SAMA_RS05925 775d5dcdf7ebd4969d4ab255bded17cc 112 PIRSF PIRSF006257 8 112 2.1E-30 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 SAMA_RS05925 775d5dcdf7ebd4969d4ab255bded17cc 112 PANTHER PTHR39586 8 111 8.0E-25 T 22-04-2016 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 Pfam PF01979 Amidohydrolase family 75 389 1.6E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 SUPERFAMILY SSF51556 80 373 5.85E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 PANTHER PTHR11113 43 389 2.1E-96 T 22-04-2016 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 PANTHER PTHR11113:SF7 43 389 2.1E-96 T 22-04-2016 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 Gene3D G3DSA:3.20.20.140 80 374 9.1E-85 T 22-04-2016 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 50 389 1.2E-73 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SAMA_RS06275 d3bcae867b898b37bf950219ca683be7 411 PIRSF PIRSF038994 48 407 9.0E-91 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 Gene3D G3DSA:2.30.130.10 249 312 7.1E-24 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.4E-17 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 PANTHER PTHR13767 1 308 8.2E-128 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 PANTHER PTHR13767:SF2 1 308 8.2E-128 T 22-04-2016 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.9E-86 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.791 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 5.4E-56 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.5E-23 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 SUPERFAMILY SSF88697 250 310 1.24E-13 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS05040 625e12d481e01fffb72a22668b2d21c0 315 SUPERFAMILY SSF55120 10 247 8.63E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 305 355 1.0E-15 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 47 7.3E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 PANTHER PTHR23115:SF184 359 710 2.2E-212 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 PANTHER PTHR23115:SF184 735 880 2.2E-212 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 SUPERFAMILY SSF46955 3 50 3.3E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 297 882 5.4E-284 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 386 540 8.8E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 SUPERFAMILY SSF52156 660 789 8.63E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 SUPERFAMILY SSF52540 378 550 2.94E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 SUPERFAMILY SSF50447 784 880 6.03E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 PANTHER PTHR23115 359 710 2.2E-212 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 PANTHER PTHR23115 735 880 2.2E-212 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Gene3D G3DSA:2.40.30.10 555 646 2.5E-22 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Pfam PF11987 Translation-initiation factor 2 667 772 9.5E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 97 2.1E-14 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Gene3D G3DSA:3.40.50.10050 682 761 3.6E-25 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 880 17.626 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Gene3D G3DSA:2.40.30.10 784 880 3.9E-38 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Pfam PF00009 Elongation factor Tu GTP binding domain 387 543 2.8E-35 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Gene3D G3DSA:3.40.50.300 382 542 5.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 Gene3D G3DSA:3.30.56.50 2 50 3.3E-20 T 22-04-2016 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 ProSitePatterns PS01176 Initiation factor 2 signature. 833 855 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SAMA_RS05030 897d5ff20af9ff0db6c33ed133bfe569 882 SUPERFAMILY SSF50447 555 637 5.52E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:1.10.3850.10 773 991 7.1E-53 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82714 682 766 6.28E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:3.30.70.1430 40 139 1.3E-22 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PANTHER PTHR32063 1 995 0.0 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82714 181 258 4.97E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82866 284 486 3.79E-35 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:1.20.1640.10 293 496 2.0E-44 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:3.30.2090.10 680 766 5.9E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 988 1.8E-185 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 PANTHER PTHR32063:SF0 1 995 0.0 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:3.30.2090.10 180 258 2.9E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82866 766 994 7.32E-43 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:3.30.70.1320 264 292 3.5E-9 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 Gene3D G3DSA:3.30.70.1320 153 177 3.5E-9 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82693 135 180 7.32E-11 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82693 262 304 7.32E-11 T 22-04-2016 SAMA_RS07390 57acb3cf7e41acf95d06cabb65905c2d 1019 SUPERFAMILY SSF82693 40 134 1.6E-19 T 22-04-2016 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 230 4.5E-54 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 PANTHER PTHR21600 1 278 2.8E-97 T 22-04-2016 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 SUPERFAMILY SSF55120 67 233 1.21E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 Gene3D G3DSA:3.10.290.10 3 58 8.4E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 SUPERFAMILY SSF55174 5 98 1.16E-14 T 22-04-2016 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 Pfam PF00849 RNA pseudouridylate synthase 67 196 6.1E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 SMART SM00363 3 63 4.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 Pfam PF01479 S4 domain 4 45 3.3E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 PANTHER PTHR21600:SF2 1 278 2.8E-97 T 22-04-2016 SAMA_RS11100 83e4ded33e2a48d7df3167e26d8ef75b 295 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423:SF445 1052 1245 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423:SF445 1002 1034 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423:SF445 907 967 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 492 584 1.7E-9 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 330 429 1.3E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SUPERFAMILY SSF55874 1080 1242 5.76E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423 223 253 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423 1002 1034 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423 907 967 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:3.30.450.20 832 971 4.0E-20 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423:SF445 223 253 1.1E-51 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 30 148 1.7E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 430 491 8.9E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 590 665 6.5E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:2.120.10.30 149 237 2.9E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SUPERFAMILY SSF55785 866 955 2.9E-10 T 22-04-2016 IPR000014 PAS domain SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF08447 PAS fold 867 946 1.1E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SUPERFAMILY SSF63829 333 575 1.09E-18 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Gene3D G3DSA:3.30.565.10 1093 1241 5.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SUPERFAMILY SSF63829 564 670 8.83E-6 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1203 1221 1.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1228 1241 1.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1190 1200 1.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1172 1186 1.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF07494 Two component regulator propeller 510 532 0.007 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF07494 Two component regulator propeller 368 390 0.0014 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF07494 Two component regulator propeller 205 227 0.0089 T 22-04-2016 IPR011110 Two component regulator propeller SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1136 1242 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 Pfam PF07495 Y_Y_Y domain 734 790 2.9E-11 T 22-04-2016 IPR011123 Two component regulator three Y SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SUPERFAMILY SSF63829 29 186 2.09E-9 T 22-04-2016 SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 SMART SM00387 1132 1244 5.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05185 631f099a42f6113041942082b3fade5b 1250 PANTHER PTHR24423 1052 1245 1.1E-51 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 Pfam PF13721 SecD export protein N-terminal TM region 19 108 6.8E-10 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 20 611 40.848 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 Gene3D G3DSA:1.20.1640.10 427 604 7.0E-22 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 Pfam PF07549 SecD/SecF GG Motif 131 152 1.5E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 4.1E-71 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 Pfam PF02355 Protein export membrane protein 429 600 1.1E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 135 597 4.8E-118 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081:SF1 316 611 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081:SF1 2 185 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081:SF1 240 298 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081 316 611 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081 2 185 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 PANTHER PTHR30081 240 298 3.9E-159 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 SUPERFAMILY SSF82866 341 352 1.27E-40 T 22-04-2016 SAMA_RS13045 ca7c5d8b6dee6bf4860dfc069d33c999 611 SUPERFAMILY SSF82866 406 605 1.27E-40 T 22-04-2016 SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.2E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 PANTHER PTHR30267 1 644 1.5E-294 T 22-04-2016 SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 PANTHER PTHR30267:SF2 1 644 1.5E-294 T 22-04-2016 SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 Gene3D G3DSA:3.40.50.300 243 329 2.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 Gene3D G3DSA:3.40.50.300 75 158 2.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 Pfam PF08298 PrkA AAA domain 20 380 3.1E-171 T 22-04-2016 IPR013153 PrkA AAA domain SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 SMART SM00763 19 380 1.1E-212 T 22-04-2016 IPR013153 PrkA AAA domain SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 PIRSF PIRSF000549 1 644 7.6E-284 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 SUPERFAMILY SSF52540 75 145 4.73E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10050 d26f8780d308bc64170845e858a44865 644 SUPERFAMILY SSF52540 253 368 4.73E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13775 f407fc9d2064238b3d599271d7230128 242 Gene3D G3DSA:1.10.3150.10 39 217 3.0E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS13775 f407fc9d2064238b3d599271d7230128 242 SUPERFAMILY SSF109604 39 223 5.02E-20 T 22-04-2016 SAMA_RS13775 f407fc9d2064238b3d599271d7230128 242 Pfam PF08668 HDOD domain 41 166 1.1E-7 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 SUPERFAMILY SSF48019 210 329 1.14E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 Gene3D G3DSA:3.40.50.300 1 138 5.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 SUPERFAMILY SSF52540 1 208 1.46E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 Gene3D G3DSA:1.10.8.60 142 220 4.0E-24 T 22-04-2016 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 329 3.2E-85 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 PANTHER PTHR34388 1 340 6.3E-60 T 22-04-2016 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 Pfam PF06144 DNA polymerase III, delta subunit 19 188 1.4E-35 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 329 7.1E-18 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS13500 9a83635d8c481e1f932a3ec18dac73fd 342 Gene3D G3DSA:1.20.272.20 221 331 1.9E-36 T 22-04-2016 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 PANTHER PTHR30183 408 542 2.0E-236 T 22-04-2016 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 PANTHER PTHR30183 5 391 2.0E-236 T 22-04-2016 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 PANTHER PTHR30183:SF2 408 542 2.0E-236 T 22-04-2016 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 PANTHER PTHR30183:SF2 5 391 2.0E-236 T 22-04-2016 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 Gene3D G3DSA:1.10.3720.10 292 538 1.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 Gene3D G3DSA:1.10.3720.10 12 265 3.0E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 263 6.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 540 1.7E-5 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 SUPERFAMILY SSF161098 283 536 6.26E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS03525 0f5039867d3fa94b252bdf77106259e0 542 SUPERFAMILY SSF161098 10 261 2.83E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 SMART SM00963 240 320 2.5E-24 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 Pfam PF00448 SRP54-type protein, GTPase domain 336 535 2.4E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 SUPERFAMILY SSF47364 235 314 2.49E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 263 535 1.0E-113 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 PANTHER PTHR11564 230 538 4.5E-151 T 22-04-2016 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 SMART SM00962 335 536 4.7E-123 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 SMART SM00382 334 525 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 SUPERFAMILY SSF52540 332 536 9.49E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 Pfam PF02881 SRP54-type protein, helical bundle domain 251 316 4.4E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 Gene3D G3DSA:3.40.50.300 332 535 2.4E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 PANTHER PTHR11564:SF16 230 538 4.5E-151 T 22-04-2016 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 509 522 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 263 536 63.766 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SAMA_RS18035 ad59809d7ae755ce703706eeb26029d6 543 Gene3D G3DSA:1.20.120.140 224 316 3.7E-35 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Gene3D G3DSA:3.40.1020.10 358 529 3.8E-54 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Gene3D G3DSA:3.40.50.1100 34 117 1.4E-5 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 61 74 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 PANTHER PTHR10314 9 383 2.6E-195 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Gene3D G3DSA:3.40.50.1100 118 357 6.1E-77 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 SUPERFAMILY SSF53686 31 380 1.96E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 SUPERFAMILY SSF55021 351 438 4.73E-25 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 330 4.1E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 PANTHER PTHR10314:SF30 9 383 2.6E-195 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 SUPERFAMILY SSF55021 435 528 2.29E-24 T 22-04-2016 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 24 528 8.3E-232 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 446 528 1.1E-22 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SAMA_RS17080 b032381c8f4fdc2829e23ab387866c8e 531 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 344 434 6.8E-24 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 84 7.6E-17 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 PANTHER PTHR21367 4 230 1.4E-67 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 103 224 4.6E-32 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 SUPERFAMILY SSF55729 78 234 3.44E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 36.777 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 PIRSF PIRSF037208 2 236 8.8E-80 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SAMA_RS10710 7aecbc84161d2a8461385acd32d4741b 237 PANTHER PTHR21367:SF0 4 230 1.4E-67 T 22-04-2016 SAMA_RS14260 781974024df5455628021d86bd1c1ac9 102 PANTHER PTHR34981:SF1 2 97 1.1E-23 T 22-04-2016 SAMA_RS14260 781974024df5455628021d86bd1c1ac9 102 Pfam PF05164 Cell division protein ZapA 6 88 7.1E-22 T 22-04-2016 IPR007838 Cell division protein ZapA-like SAMA_RS14260 781974024df5455628021d86bd1c1ac9 102 SUPERFAMILY SSF102829 6 95 8.11E-26 T 22-04-2016 IPR007838 Cell division protein ZapA-like SAMA_RS14260 781974024df5455628021d86bd1c1ac9 102 PANTHER PTHR34981 2 97 1.1E-23 T 22-04-2016 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 28 256 39.614 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 201 218 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 PANTHER PTHR10291 28 266 4.0E-117 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 SUPERFAMILY SSF64005 26 251 1.07E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 Pfam PF01255 Putative undecaprenyl diphosphate synthase 35 255 1.8E-79 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 Gene3D G3DSA:3.40.1180.10 23 262 1.6E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS05990 73cc3a6c53b0b5d3c754d375defb233a 266 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 28 255 4.9E-92 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 102 26.946 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 Gene3D G3DSA:2.60.120.10 10 102 1.6E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 PANTHER PTHR36540 2 102 1.5E-41 T 22-04-2016 SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 Pfam PF06865 Protein of unknown function (DUF1255) 12 101 1.0E-33 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 SUPERFAMILY SSF51182 11 102 9.57E-34 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS17815 09a67e18273b29f6d0f57bf867b4f4c9 102 PANTHER PTHR36540:SF1 2 102 1.5E-41 T 22-04-2016 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 55.813 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 SUPERFAMILY SSF102886 7 302 8.63E-141 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 Gene3D G3DSA:3.40.1500.10 6 302 4.9E-139 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PANTHER PTHR10755 7 303 1.6E-194 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PIRSF PIRSF000166 4 303 1.0E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 262 288 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 125 147 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 31 47 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 234 261 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 162 191 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 90 114 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 PRINTS PR00073 Coprogen oxidase signature 48 69 2.8E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS00245 90394a822bca9c978d606c104167b6a6 304 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 1.0E-134 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 SUPERFAMILY SSF53756 12 517 6.63E-85 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 Pfam PF08323 Starch synthase catalytic domain 1 258 1.3E-56 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 Gene3D G3DSA:3.40.50.2000 316 494 3.5E-43 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526:SF17 12 242 1.5E-68 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526:SF17 261 291 1.5E-68 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526:SF17 322 509 1.5E-68 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 Pfam PF00534 Glycosyl transferases group 1 363 470 2.4E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526 12 242 1.5E-68 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526 261 291 1.5E-68 T 22-04-2016 SAMA_RS12790 10de5b22550ed7982db8d1e462d4f5cf 519 PANTHER PTHR12526 322 509 1.5E-68 T 22-04-2016 SAMA_RS11425 92899f3b2d7715de822290f3903ed155 119 Gene3D G3DSA:3.40.250.10 7 118 1.3E-27 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11425 92899f3b2d7715de822290f3903ed155 119 Pfam PF00581 Rhodanese-like domain 24 111 5.1E-15 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11425 92899f3b2d7715de822290f3903ed155 119 SUPERFAMILY SSF52821 4 118 1.57E-29 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11425 92899f3b2d7715de822290f3903ed155 119 SMART SM00450 18 115 1.1E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11425 92899f3b2d7715de822290f3903ed155 119 PANTHER PTHR12231 18 117 5.6E-14 T 22-04-2016 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 SUPERFAMILY SSF47823 2 96 1.92E-30 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 293 30.738 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 6 292 5.9E-111 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 293 58.535 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 PANTHER PTHR30349:SF5 3 292 5.2E-116 T 22-04-2016 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 80 5.4E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Gene3D G3DSA:1.10.150.130 3 95 2.7E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Gene3D G3DSA:1.10.443.10 109 283 1.5E-56 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 Pfam PF00589 Phage integrase family 109 278 9.4E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 SUPERFAMILY SSF56349 103 291 6.77E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SAMA_RS14330 e84b2d2061a4e6a30da77a0441b9bc7d 293 PANTHER PTHR30349 3 292 5.2E-116 T 22-04-2016 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Pfam PF00072 Response regulator receiver domain 7 115 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 PANTHER PTHR32071:SF21 1 446 7.1E-242 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 SMART SM00448 4 115 9.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Gene3D G3DSA:3.40.50.300 132 299 4.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 1.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 SUPERFAMILY SSF52172 2 172 6.12E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 PANTHER PTHR32071 1 446 7.1E-242 T 22-04-2016 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Gene3D G3DSA:1.10.8.60 301 354 1.6E-24 T 22-04-2016 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Gene3D G3DSA:1.10.10.60 355 437 2.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 SUPERFAMILY SSF52540 132 369 7.89E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 SMART SM00382 148 291 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Gene3D G3DSA:3.40.50.2300 5 120 3.6E-30 T 22-04-2016 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 Pfam PF00158 Sigma-54 interaction domain 132 294 8.4E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS12035 f3127adb5e7105a7fbdbe11dd4f4435a 446 SUPERFAMILY SSF46689 341 436 2.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 SUPERFAMILY SSF48179 210 370 2.38E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-57 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 SUPERFAMILY SSF51735 27 209 1.38E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 SUPERFAMILY SSF48179 349 486 1.22E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 PANTHER PTHR21371 1 493 4.9E-192 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Gene3D G3DSA:1.10.1040.10 360 433 6.8E-13 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 487 36.115 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Gene3D G3DSA:3.40.50.720 1 200 3.0E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 359 484 4.2E-16 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 4.7E-30 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17100 372fae977c9c464f4b6f10ef457fcbd1 493 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 36 367 1.1E-120 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 SMART SM01091 205 283 4.3E-27 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 SUPERFAMILY SSF56176 203 286 5.73E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 SMART SM00116 75 124 9.5 T 22-04-2016 IPR000644 CBS domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 SMART SM00116 139 187 0.36 T 22-04-2016 IPR000644 CBS domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 Gene3D G3DSA:3.10.580.10 52 195 2.5E-24 T 22-04-2016 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 Pfam PF00571 CBS domain 138 187 1.6E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 Pfam PF00571 CBS domain 66 122 8.8E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 PANTHER PTHR22777 22 291 5.4E-119 T 22-04-2016 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 Pfam PF03471 Transporter associated domain 206 281 2.4E-19 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 SUPERFAMILY SSF54631 53 190 3.79E-34 T 22-04-2016 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 Gene3D G3DSA:3.30.465.10 196 283 2.0E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS13470 7e2a84ce92543ea0429ad359a4146707 292 PANTHER PTHR22777:SF17 22 291 5.4E-119 T 22-04-2016 SAMA_RS14170 cd9fb6d2d28070a8ca5d94814ae157ed 110 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 101 2.5E-19 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS14170 cd9fb6d2d28070a8ca5d94814ae157ed 110 PANTHER PTHR33570 11 110 7.7E-36 T 22-04-2016 SAMA_RS14170 cd9fb6d2d28070a8ca5d94814ae157ed 110 Gene3D G3DSA:1.20.1290.10 12 107 2.2E-24 T 22-04-2016 IPR029032 AhpD-like SAMA_RS14170 cd9fb6d2d28070a8ca5d94814ae157ed 110 SUPERFAMILY SSF69118 10 103 8.2E-29 T 22-04-2016 IPR029032 AhpD-like SAMA_RS14170 cd9fb6d2d28070a8ca5d94814ae157ed 110 PANTHER PTHR33570:SF1 11 110 7.7E-36 T 22-04-2016 SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 Gene3D G3DSA:3.20.20.450 241 482 2.6E-82 T 22-04-2016 IPR001633 EAL domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 74 219 5.5E-17 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 SMART SM00267 60 225 2.7E-18 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 PANTHER PTHR33121:SF13 200 488 1.8E-72 T 22-04-2016 SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 SMART SM00052 235 480 6.7E-86 T 22-04-2016 IPR001633 EAL domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 Gene3D G3DSA:3.30.70.270 76 226 2.7E-27 T 22-04-2016 SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 SUPERFAMILY SSF55073 79 218 4.0E-27 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 76 219 7.8E-25 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 SUPERFAMILY SSF141868 241 485 7.85E-78 T 22-04-2016 IPR001633 EAL domain SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 PANTHER PTHR33121 200 488 1.8E-72 T 22-04-2016 SAMA_RS05250 094bc801acb096a7aec161eb9a42553c 494 Pfam PF00563 EAL domain 241 475 2.0E-64 T 22-04-2016 IPR001633 EAL domain SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 PANTHER PTHR26402 107 201 1.3E-16 T 22-04-2016 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 Gene3D G3DSA:1.10.10.10 140 204 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 SUPERFAMILY SSF46894 140 203 4.08E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 SMART SM00421 144 201 9.3E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 7.2E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 PANTHER PTHR26402:SF151 107 201 1.3E-16 T 22-04-2016 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 4.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 4.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS07525 4168021a7a46f1bf4c2cda35a289027a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 4.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS18690 52277ca7fc41892d55c76e279ed477ad 137 PANTHER PTHR28620:SF2 1 132 1.2E-35 T 22-04-2016 SAMA_RS18690 52277ca7fc41892d55c76e279ed477ad 137 SUPERFAMILY SSF51316 11 131 1.99E-29 T 22-04-2016 IPR011057 Mss4-like SAMA_RS18690 52277ca7fc41892d55c76e279ed477ad 137 PANTHER PTHR28620 1 132 1.2E-35 T 22-04-2016 SAMA_RS18690 52277ca7fc41892d55c76e279ed477ad 137 Gene3D G3DSA:3.90.1590.10 11 112 2.6E-17 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS18690 52277ca7fc41892d55c76e279ed477ad 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 112 1.9E-8 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 Gene3D G3DSA:3.40.1260.10 2 117 8.5E-41 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 Pfam PF02635 DsrE/DsrF-like family 2 117 1.1E-21 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 SUPERFAMILY SSF75169 1 118 2.35E-35 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 PANTHER PTHR38780 1 118 6.2E-42 T 22-04-2016 SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 116 1.4E-37 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF SAMA_RS09280 b3dcc57cc0ab27e4cb6ed7169ac53818 118 PANTHER PTHR38780:SF1 1 118 6.2E-42 T 22-04-2016 SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 PANTHER PTHR12818 7 236 4.6E-115 T 22-04-2016 SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 Gene3D G3DSA:2.40.30.70 7 157 1.2E-50 T 22-04-2016 IPR023370 TsaA-like domain SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 SUPERFAMILY SSF118196 7 232 9.81E-77 T 22-04-2016 IPR023370 TsaA-like domain SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 Pfam PF01980 Uncharacterised protein family UPF0066 22 144 3.2E-40 T 22-04-2016 IPR023370 TsaA-like domain SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 PANTHER PTHR12818:SF6 7 236 4.6E-115 T 22-04-2016 SAMA_RS06095 a4911967ca46c886d74dc7ec1309e4f1 245 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 7 149 7.8E-45 T 22-04-2016 IPR023370 TsaA-like domain SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 SUPERFAMILY SSF57783 21 61 4.08E-12 T 22-04-2016 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Gene3D G3DSA:3.30.65.10 67 104 4.8E-12 T 22-04-2016 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Gene3D G3DSA:3.30.65.10 23 62 3.1E-13 T 22-04-2016 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 112 149 7.1E-8 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 153 186 8.1E-4 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 70 104 1.8E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 PANTHER PTHR11390:SF26 1 181 1.3E-90 T 22-04-2016 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 PANTHER PTHR11390 1 181 1.3E-90 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS00235 41155c343d63b9dfb230695a8fdb52e8 187 SUPERFAMILY SSF57783 67 106 2.38E-11 T 22-04-2016 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Pfam PF00158 Sigma-54 interaction domain 141 307 5.2E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Gene3D G3DSA:3.40.50.300 139 313 7.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Gene3D G3DSA:3.40.50.2300 6 136 1.4E-30 T 22-04-2016 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Gene3D G3DSA:1.10.8.60 314 390 1.6E-23 T 22-04-2016 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 SUPERFAMILY SSF46689 381 470 5.82E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 467 2.1E-230 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 SMART SM00382 161 312 2.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Gene3D G3DSA:1.10.10.60 402 469 2.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Pfam PF02954 Bacterial regulatory protein, Fis family 429 467 6.7E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 PANTHER PTHR32071:SF15 1 470 9.5E-242 T 22-04-2016 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 SMART SM00448 5 116 1.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 PANTHER PTHR32071 1 470 9.5E-242 T 22-04-2016 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 SUPERFAMILY SSF52172 7 186 1.18E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 3.14E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 3.14E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 Pfam PF00072 Response regulator receiver domain 7 116 4.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS17830 e68c36e13b4595a41ea309fbb2079d9e 470 SUPERFAMILY SSF52540 140 384 5.61E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 PANTHER PTHR24221 1 612 0.0 T 22-04-2016 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 Pfam PF00005 ABC transporter 381 534 4.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 Pfam PF00664 ABC transporter transmembrane region 48 312 1.6E-17 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 Gene3D G3DSA:3.40.50.300 363 599 4.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 SMART SM00382 389 580 1.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 SUPERFAMILY SSF52540 356 604 2.71E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 SUPERFAMILY SSF90123 32 349 1.83E-51 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 Gene3D G3DSA:1.20.1560.10 33 335 7.5E-38 T 22-04-2016 SAMA_RS11515 28277dfb095662c1b7a721da7ea515fb 612 PANTHER PTHR24221:SF203 1 612 0.0 T 22-04-2016 SAMA_RS09720 1de6299660204cc4a8562ea26acd633a 271 PANTHER PTHR34266 1 258 7.8E-154 T 22-04-2016 SAMA_RS09720 1de6299660204cc4a8562ea26acd633a 271 Gene3D G3DSA:3.20.20.70 1 253 1.7E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09720 1de6299660204cc4a8562ea26acd633a 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 2.1E-106 T 22-04-2016 SAMA_RS09720 1de6299660204cc4a8562ea26acd633a 271 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.63 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SAMA_RS09720 1de6299660204cc4a8562ea26acd633a 271 SUPERFAMILY SSF110399 1 237 3.4E-84 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 PANTHER PTHR11746 1 301 4.6E-22 T 22-04-2016 SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 Gene3D G3DSA:3.40.50.150 105 340 5.4E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 PIRSF PIRSF005739 4 347 9.8E-10 T 22-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 SUPERFAMILY SSF46785 20 103 7.07E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 SUPERFAMILY SSF53335 103 340 3.42E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 Pfam PF00891 O-methyltransferase 186 339 2.5E-15 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 Gene3D G3DSA:1.10.10.10 19 104 6.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07830 47629c2e345a06b3a485cc33146fa19d 359 PANTHER PTHR11746:SF104 1 301 4.6E-22 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.0E-83 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:3.30.70.1430 40 141 6.5E-31 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82693 135 181 6.8E-22 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82693 268 324 6.8E-22 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Pfam PF00873 AcrB/AcrD/AcrF family 5 1010 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82693 40 133 9.77E-26 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82866 791 1012 1.96E-47 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:1.10.3850.10 798 1012 8.1E-60 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:1.10.3850.10 274 492 1.1E-60 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PANTHER PTHR32063 1 1026 0.0 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:3.30.70.1430 557 651 1.1E-12 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:3.30.2090.10 182 268 9.4E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 Gene3D G3DSA:3.30.2090.10 704 789 7.8E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82714 705 789 3.27E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 PANTHER PTHR32063:SF14 1 1026 0.0 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82714 182 266 9.29E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82866 291 491 2.88E-49 T 22-04-2016 SAMA_RS09970 0a8091f8b255c22a4953cb5fd028479c 1034 SUPERFAMILY SSF82693 554 654 3.56E-18 T 22-04-2016 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 402 426 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PANTHER PTHR11686:SF9 46 583 5.2E-225 T 22-04-2016 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 59 581 2.2E-198 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 173 192 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 81 106 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 302 321 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 272 288 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 173 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 426 444 2.7E-78 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 SUPERFAMILY SSF56235 50 582 5.02E-192 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 PANTHER PTHR11686 46 583 5.2E-225 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS08165 e0aff9c26193da0904f2d1072f3fddb5 590 Pfam PF01019 Gamma-glutamyltranspeptidase 74 583 4.1E-184 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 PANTHER PTHR22642:SF2 53 542 5.4E-180 T 22-04-2016 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 PANTHER PTHR22642 53 542 5.4E-180 T 22-04-2016 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 Pfam PF07969 Amidohydrolase family 69 542 2.5E-101 T 22-04-2016 IPR013108 Amidohydrolase 3 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 SUPERFAMILY SSF51338 48 76 1.9E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 SUPERFAMILY SSF51338 501 543 1.9E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 SUPERFAMILY SSF51556 212 502 3.36E-37 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 SUPERFAMILY SSF51556 75 136 3.36E-37 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 Gene3D G3DSA:3.20.20.140 214 498 2.1E-32 T 22-04-2016 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 Gene3D G3DSA:2.30.40.10 501 543 1.9E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS16335 6a89d13191e209a196678fc97afd9cdf 546 Gene3D G3DSA:2.30.40.10 48 108 3.0E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 Gene3D G3DSA:3.30.300.20 4 119 1.4E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 20.872 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.4E-35 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 SUPERFAMILY SSF89919 2 105 4.32E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 PANTHER PTHR33515 1 137 1.6E-44 T 22-04-2016 SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 98 2.0E-46 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SAMA_RS05035 9cf3c881d5200f7cf46f43d65661cba2 137 Pfam PF02033 Ribosome-binding factor A 7 110 2.1E-29 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 SUPERFAMILY SSF52540 452 628 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 SUPERFAMILY SSF52540 21 378 1.59E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887:SF351 105 121 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887:SF351 58 73 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887:SF351 161 350 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Gene3D G3DSA:3.40.50.300 168 331 3.8E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 SUPERFAMILY SSF52540 299 396 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Gene3D G3DSA:3.40.50.300 436 482 5.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Gene3D G3DSA:3.40.50.300 540 614 5.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Gene3D G3DSA:3.40.50.300 372 398 5.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Pfam PF13604 AAA domain 168 337 1.3E-30 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887 105 121 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887 58 73 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 PANTHER PTHR10887 161 350 7.1E-70 T 22-04-2016 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 627 4.3E-169 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 26 627 51.842 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SAMA_RS09955 9a74f38f873c3cc793f0eef4b74b0a75 631 Pfam PF13538 UvrD-like helicase C-terminal domain 552 599 1.3E-12 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 449 5.8E-101 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 PANTHER PTHR30026 10 469 3.4E-119 T 22-04-2016 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 PANTHER PTHR30026:SF4 10 469 3.4E-119 T 22-04-2016 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 SUPERFAMILY SSF56954 30 457 2.09E-91 T 22-04-2016 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 Pfam PF02321 Outer membrane efflux protein 32 223 9.6E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 Pfam PF02321 Outer membrane efflux protein 246 443 1.1E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS16975 a128f9c97bf6f749620e3b82cd08053f 469 Gene3D G3DSA:1.20.1600.10 27 447 2.1E-72 T 22-04-2016 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 Gene3D G3DSA:1.10.240.10 206 324 2.2E-19 T 22-04-2016 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 SUPERFAMILY SSF52374 5 330 5.16E-98 T 22-04-2016 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PANTHER PTHR10055:SF10 2 332 1.4E-181 T 22-04-2016 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PANTHER PTHR10055 2 332 1.4E-181 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.7E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.7E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.7E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.7E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 Gene3D G3DSA:3.40.50.620 4 205 1.6E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 2.4E-113 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 41.733 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SAMA_RS17490 d636bbb4d9b2206641060d311ee11ace 332 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 2.6E-82 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.6E-37 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 3.9E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 3.9E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 3.9E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 3.9E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 SUPERFAMILY SSF46911 3 71 1.44E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 Gene3D G3DSA:4.10.640.10 8 72 3.1E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 PANTHER PTHR13479 2 72 1.6E-34 T 22-04-2016 SAMA_RS15985 f241ed7c6866008f15e4fc84ea199892 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15005 45462b40db4639c67984be11663e2465 281 PANTHER PTHR10264 242 257 1.8E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS15005 45462b40db4639c67984be11663e2465 281 PANTHER PTHR10264 51 219 1.8E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS15005 45462b40db4639c67984be11663e2465 281 PANTHER PTHR10264:SF46 242 257 1.8E-63 T 22-04-2016 SAMA_RS15005 45462b40db4639c67984be11663e2465 281 PANTHER PTHR10264:SF46 51 219 1.8E-63 T 22-04-2016 SAMA_RS15005 45462b40db4639c67984be11663e2465 281 Pfam PF01145 SPFH domain / Band 7 family 54 227 5.7E-24 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15005 45462b40db4639c67984be11663e2465 281 SUPERFAMILY SSF117892 90 217 9.81E-11 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15005 45462b40db4639c67984be11663e2465 281 SMART SM00244 50 214 1.5E-8 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 PANTHER PTHR32552:SF0 7 695 9.4E-28 T 22-04-2016 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 PANTHER PTHR32552 7 695 9.4E-28 T 22-04-2016 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 SUPERFAMILY SSF56935 36 358 7.22E-95 T 22-04-2016 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 SUPERFAMILY SSF56935 418 694 7.22E-95 T 22-04-2016 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 Gene3D G3DSA:2.170.130.10 56 157 2.0E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 151 1.7E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 Gene3D G3DSA:2.40.170.20 158 375 2.5E-64 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS00660 4f1cd781a2af7a60ad6311317f9ec798 695 Gene3D G3DSA:2.40.170.20 426 694 2.5E-64 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PANTHER PTHR12128 1 293 1.0E-130 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 SMART SM01130 1 290 8.5E-127 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.27E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.27E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.27E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.27E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PIRSF PIRSF001365 1 293 1.9E-89 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 PANTHER PTHR12128:SF34 1 293 1.0E-130 T 22-04-2016 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.108 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 Gene3D G3DSA:3.20.20.70 1 291 3.4E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 SUPERFAMILY SSF51569 1 290 3.87E-95 T 22-04-2016 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 279 2.5E-100 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SAMA_RS09985 58d3df52402711ff31821cc891592859 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 1.1E-106 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS17745 b15b19b52c8e0f6b4cba8b50e0553f10 519 PANTHER PTHR34219:SF4 1 509 7.9E-181 T 22-04-2016 SAMA_RS17745 b15b19b52c8e0f6b4cba8b50e0553f10 519 Pfam PF03929 PepSY-associated TM region 11 372 3.1E-52 T 22-04-2016 IPR005625 PepSY-associated TM protein SAMA_RS17745 b15b19b52c8e0f6b4cba8b50e0553f10 519 PANTHER PTHR34219 1 509 7.9E-181 T 22-04-2016 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 SUPERFAMILY SSF103473 20 402 1.16E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 Pfam PF07690 Major Facilitator Superfamily 30 357 9.6E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 403 1.0E-127 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 Gene3D G3DSA:1.20.1250.20 229 400 1.2E-8 T 22-04-2016 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 Gene3D G3DSA:1.20.1250.20 26 220 3.2E-19 T 22-04-2016 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 PANTHER PTHR23514:SF7 22 405 1.5E-116 T 22-04-2016 SAMA_RS08685 50c95f8fc11713a741b3a82e63229316 415 PANTHER PTHR23514 22 405 1.5E-116 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 Gene3D G3DSA:1.20.1250.20 18 223 9.9E-12 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 Gene3D G3DSA:1.20.1250.20 241 426 7.7E-5 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 Pfam PF07690 Major Facilitator Superfamily 21 396 3.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514 1 175 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514 194 328 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514 346 436 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 SUPERFAMILY SSF103473 10 430 6.54E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514:SF10 1 175 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514:SF10 194 328 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 PANTHER PTHR23514:SF10 346 436 9.3E-134 T 22-04-2016 SAMA_RS06280 9938bac31712debed231e4e06f1fd738 438 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 97 428 5.8E-63 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Gene3D G3DSA:3.10.350.10 331 374 1.2E-13 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Pfam PF01476 LysM domain 394 436 2.0E-11 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Pfam PF01476 LysM domain 332 374 1.6E-9 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Pfam PF01476 LysM domain 451 492 1.3E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SUPERFAMILY SSF53955 98 255 3.94E-41 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Gene3D G3DSA:1.10.530.10 96 258 1.7E-45 T 22-04-2016 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SMART SM00257 393 437 7.5E-14 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SMART SM00257 331 374 4.1E-12 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SMART SM00257 450 493 5.5E-15 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 PANTHER PTHR21666 1 478 1.7E-163 T 22-04-2016 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 120 148 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 PANTHER PTHR21666:SF203 1 478 1.7E-163 T 22-04-2016 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SUPERFAMILY SSF54106 330 374 5.23E-9 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SUPERFAMILY SSF54106 392 437 1.96E-11 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Gene3D G3DSA:3.10.350.10 392 438 4.7E-18 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Gene3D G3DSA:3.10.350.10 448 492 2.5E-18 T 22-04-2016 IPR018392 LysM domain SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 Pfam PF01464 Transglycosylase SLT domain 113 213 1.4E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SAMA_RS09870 8432ca2913495a9ddf396dde83ac78ae 495 SUPERFAMILY SSF54106 449 492 2.88E-11 T 22-04-2016 IPR018392 LysM domain SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 SUPERFAMILY SSF47413 19 66 5.32E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 Gene3D G3DSA:1.10.260.40 13 64 2.1E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 PANTHER PTHR34475:SF1 7 340 4.6E-45 T 22-04-2016 SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 Pfam PF13413 Helix-turn-helix domain 24 84 7.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 Pfam PF13464 Domain of unknown function (DUF4115) 263 336 9.7E-23 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 SAMA_RS12375 b2d8f5c08ca1c545d42a86fbbec3c69f 340 PANTHER PTHR34475 7 340 4.6E-45 T 22-04-2016 SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 SUPERFAMILY SSF56300 1 320 3.66E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 Pfam PF00149 Calcineurin-like phosphoesterase 1 216 4.0E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 4.5E-56 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 266 355 2.4E-11 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 Gene3D G3DSA:3.60.21.10 1 265 1.4E-68 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 PANTHER PTHR30337:SF0 1 378 2.2E-110 T 22-04-2016 SAMA_RS06635 4e403a92061e5bccc58c830dae9e2005 381 PANTHER PTHR30337 1 378 2.2E-110 T 22-04-2016 SAMA_RS17135 0f8dfce6bebeb3fc48ae5e1220c1d5f1 286 SUPERFAMILY SSF53850 24 216 8.83E-20 T 22-04-2016 SAMA_RS17135 0f8dfce6bebeb3fc48ae5e1220c1d5f1 286 SUPERFAMILY SSF53850 245 274 8.83E-20 T 22-04-2016 SAMA_RS17135 0f8dfce6bebeb3fc48ae5e1220c1d5f1 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 206 5.5E-6 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS17135 0f8dfce6bebeb3fc48ae5e1220c1d5f1 286 Gene3D G3DSA:3.40.190.10 38 110 4.2E-7 T 22-04-2016 SAMA_RS17135 0f8dfce6bebeb3fc48ae5e1220c1d5f1 286 Gene3D G3DSA:3.40.190.10 240 276 4.2E-7 T 22-04-2016 SAMA_RS17820 ec77049ecfb3de9aa377a26c894a8795 178 Pfam PF13511 Domain of unknown function (DUF4124) 9 45 1.1E-12 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 SUPERFAMILY SSF54570 3 84 8.89E-36 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 Gene3D G3DSA:3.30.860.10 1 91 2.4E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.5E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 Pfam PF00203 Ribosomal protein S19 3 83 7.0E-38 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.713 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 PIRSF PIRSF002144 1 92 4.0E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 PANTHER PTHR11880 1 91 4.5E-58 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01145 9e74590d102a829e405337adec4ea608 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 Gene3D G3DSA:3.40.50.1260 5 174 9.8E-62 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PANTHER PTHR11406 1 392 2.5E-200 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 39.007 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 Pfam PF00162 Phosphoglycerate kinase 6 378 3.0E-140 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 Gene3D G3DSA:3.40.50.1270 175 376 6.7E-85 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 3.8E-84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 SUPERFAMILY SSF53748 3 387 9.66E-147 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS14420 15ce76df0b212097a92918aa932b6ce4 393 PIRSF PIRSF000724 1 393 3.7E-135 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SAMA_RS17985 eedfd30239fa2737cc81a0ceaeabdfcf 418 Pfam PF13520 Amino acid permease 8 362 8.3E-29 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS17985 eedfd30239fa2737cc81a0ceaeabdfcf 418 PIRSF PIRSF006060 1 408 2.5E-52 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS17985 eedfd30239fa2737cc81a0ceaeabdfcf 418 PANTHER PTHR11785:SF415 1 413 1.2E-115 T 22-04-2016 SAMA_RS17985 eedfd30239fa2737cc81a0ceaeabdfcf 418 PANTHER PTHR11785 1 413 1.2E-115 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 Gene3D G3DSA:3.10.310.10 2 153 3.1E-65 T 22-04-2016 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 SUPERFAMILY SSF54506 2 330 5.16E-116 T 22-04-2016 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 Gene3D G3DSA:3.10.310.10 154 320 1.4E-62 T 22-04-2016 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 PANTHER PTHR33442 9 333 3.6E-117 T 22-04-2016 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 Pfam PF05544 Proline racemase 8 331 3.2E-125 T 22-04-2016 IPR008794 Proline racemase family SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 PANTHER PTHR33442:SF2 9 333 3.6E-117 T 22-04-2016 SAMA_RS07955 4f69d91e3525f3c5b607a6c85c2c6bbf 333 PIRSF PIRSF029792 1 333 1.6E-125 T 22-04-2016 IPR008794 Proline racemase family SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 Pfam PF04397 LytTr DNA-binding domain 142 233 1.2E-19 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 Gene3D G3DSA:2.40.50.40 134 195 6.3E-9 T 22-04-2016 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 PANTHER PTHR26402 2 116 1.8E-35 T 22-04-2016 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 SUPERFAMILY SSF52172 1 123 1.71E-30 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 SMART SM00448 2 112 2.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 PANTHER PTHR26402:SF524 2 116 1.8E-35 T 22-04-2016 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 Pfam PF00072 Response regulator receiver domain 5 111 9.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 Gene3D G3DSA:2.20.25.10 212 235 1.5E-5 T 22-04-2016 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 Gene3D G3DSA:3.40.50.2300 1 122 7.3E-32 T 22-04-2016 SAMA_RS06710 7c3bcba32ea6898f2d9c11b581541ad6 236 SMART SM00850 141 234 1.3E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 SUPERFAMILY SSF56784 9 228 6.76E-48 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 101 201 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 10 226 6.8E-71 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PANTHER PTHR12725:SF57 11 228 2.3E-47 T 22-04-2016 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 Gene3D G3DSA:1.10.150.240 21 97 3.9E-17 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 195 3.0E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 73 200 9.2E-22 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 PANTHER PTHR12725 11 228 2.3E-47 T 22-04-2016 SAMA_RS01540 7be0de34395288a290afc70040678b9a 229 Gene3D G3DSA:3.40.50.1000 98 228 1.5E-41 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 118 178 6.0E-29 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 PANTHER PTHR10072:SF37 1 97 6.7E-85 T 22-04-2016 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 PANTHER PTHR10072:SF37 147 189 6.7E-85 T 22-04-2016 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 SUPERFAMILY SSF89360 1 97 5.3E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 1.1E-11 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 Pfam PF01106 NifU-like domain 111 178 3.1E-21 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 Gene3D G3DSA:2.60.300.12 1 97 1.7E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 PANTHER PTHR10072 1 97 6.7E-85 T 22-04-2016 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 PANTHER PTHR10072 147 189 6.7E-85 T 22-04-2016 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 44.024 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 SUPERFAMILY SSF117916 95 185 6.98E-24 T 22-04-2016 SAMA_RS18210 baecf99bb305502fd2ee1a09fe336fdb 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 3.3E-97 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 SAMA_RS15895 ed0a41c928fff4f56a0082b8586de494 191 PANTHER PTHR35602 1 191 1.8E-82 T 22-04-2016 SAMA_RS15895 ed0a41c928fff4f56a0082b8586de494 191 SUPERFAMILY SSF53474 2 188 1.1E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS15895 ed0a41c928fff4f56a0082b8586de494 191 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 188 2.6E-50 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SAMA_RS15895 ed0a41c928fff4f56a0082b8586de494 191 PANTHER PTHR35602:SF3 1 191 1.8E-82 T 22-04-2016 SAMA_RS15895 ed0a41c928fff4f56a0082b8586de494 191 Gene3D G3DSA:3.40.50.1820 2 184 8.8E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 SUPERFAMILY SSF48435 23 471 3.4E-109 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 Pfam PF01464 Transglycosylase SLT domain 478 587 2.5E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 Gene3D G3DSA:1.10.1240.20 402 466 9.6E-17 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 SUPERFAMILY SSF53955 476 631 2.85E-46 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 Gene3D G3DSA:1.10.530.10 469 629 1.2E-47 T 22-04-2016 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 466 9.6E-18 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 PANTHER PTHR21666 457 619 1.1E-61 T 22-04-2016 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 Gene3D G3DSA:1.25.20.10 24 375 8.0E-87 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 SAMA_RS09920 38223a17ae4328806608b9d53c788c85 638 PANTHER PTHR21666:SF201 457 619 1.1E-61 T 22-04-2016 SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 PANTHER PTHR21327 1 216 5.1E-145 T 22-04-2016 SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 42.165 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 Gene3D G3DSA:3.90.870.10 16 216 4.4E-91 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 23 213 8.0E-80 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 PANTHER PTHR21327:SF15 1 216 5.1E-145 T 22-04-2016 SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 SUPERFAMILY SSF55821 13 215 9.39E-82 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS00725 ec4ca8678dd13cd26ce25e0143e09c12 222 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 18 214 3.9E-76 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 Pfam PF00677 Lumazine binding domain 3 87 2.4E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 Pfam PF00677 Lumazine binding domain 100 184 2.0E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 SUPERFAMILY SSF63380 93 196 2.89E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 PIRSF PIRSF000498 1 207 1.6E-74 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 7.6E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 SUPERFAMILY SSF63380 1 88 4.34E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 PANTHER PTHR21098 1 217 5.4E-98 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 Gene3D G3DSA:2.40.30.20 5 104 1.1E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS05305 75b247cc7b99702e39b263eada1f0165 217 Gene3D G3DSA:2.40.30.20 105 196 1.1E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 Gene3D G3DSA:3.40.50.720 4 235 2.7E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 Pfam PF00106 short chain dehydrogenase 5 187 5.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PANTHER PTHR24322 147 179 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PANTHER PTHR24322 7 131 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 SUPERFAMILY SSF51735 3 242 2.24E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS04260 6dd28745f443f0806d3d69cb7d2d125d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Pfam PF07517 SecA DEAD-like domain 7 402 4.0E-130 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Gene3D G3DSA:3.40.50.300 417 619 1.9E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Gene3D G3DSA:3.90.1440.10 230 368 6.9E-48 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF52540 416 618 4.17E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF81767 230 368 1.15E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Pfam PF02810 SEC-C motif 888 906 1.6E-10 T 22-04-2016 IPR004027 SEC-C motif SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.3E-40 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF52540 368 415 2.82E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF52540 4 228 2.82E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.038 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Gene3D G3DSA:3.40.50.300 369 416 5.2E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Gene3D G3DSA:3.40.50.300 3 228 5.2E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PANTHER PTHR30612 550 908 0.0 T 22-04-2016 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PANTHER PTHR30612 5 520 0.0 T 22-04-2016 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SMART SM00958 228 358 9.6E-87 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 117 127 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 413 426 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 170 190 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 376 393 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 101 115 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 339 361 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 PRINTS PR00906 SecA protein signature 63 87 1.5E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.5E-68 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 Gene3D G3DSA:1.10.3060.10 648 831 6.4E-60 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF81886 620 840 1.27E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SAMA_RS01930 39b693f21ed36cd0b4a5edd45767b039 908 SUPERFAMILY SSF81886 884 896 1.27E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 Pfam PF01584 CheW-like domain 11 146 4.5E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 PANTHER PTHR22617 11 160 2.4E-56 T 22-04-2016 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 SUPERFAMILY SSF50341 8 148 8.11E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 PIRSF PIRSF002867 1 295 1.7E-86 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 SMART SM00260 6 144 1.7E-18 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 Pfam PF00072 Response regulator receiver domain 172 286 6.1E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 Gene3D G3DSA:3.40.50.2300 169 294 1.7E-26 T 22-04-2016 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 PANTHER PTHR22617:SF37 11 160 2.4E-56 T 22-04-2016 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 SUPERFAMILY SSF52172 166 294 6.97E-26 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 Gene3D G3DSA:2.30.30.40 80 138 2.1E-4 T 22-04-2016 SAMA_RS11490 af54c6f249c0d5b407ee17b83c8af70e 299 SMART SM00448 170 287 1.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 Gene3D G3DSA:3.40.30.10 20 217 1.2E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 226 246 6.8E-4 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 Pfam PF01323 DSBA-like thioredoxin domain 42 204 3.4E-9 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 PANTHER PTHR35891:SF2 1 115 3.3E-73 T 22-04-2016 SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 PANTHER PTHR35891:SF2 132 225 3.3E-73 T 22-04-2016 SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 SUPERFAMILY SSF52833 21 215 6.72E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 PANTHER PTHR35891 1 115 3.3E-73 T 22-04-2016 SAMA_RS15320 7a799642b8704eb396683ed3f99fcfa0 248 PANTHER PTHR35891 132 225 3.3E-73 T 22-04-2016 SAMA_RS01900 f770956d426e06114a88095a71ce7102 247 Pfam PF03799 Cell division protein FtsQ 118 230 2.0E-23 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB SAMA_RS01900 f770956d426e06114a88095a71ce7102 247 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 15 238 21.918 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 SAMA_RS01900 f770956d426e06114a88095a71ce7102 247 Pfam PF08478 POTRA domain, FtsQ-type 46 114 1.1E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SAMA_RS01900 f770956d426e06114a88095a71ce7102 247 PANTHER PTHR35851:SF1 9 247 6.3E-65 T 22-04-2016 SAMA_RS01900 f770956d426e06114a88095a71ce7102 247 PANTHER PTHR35851 9 247 6.3E-65 T 22-04-2016 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 Gene3D G3DSA:1.10.357.10 3 206 2.5E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 PANTHER PTHR30055 3 212 6.2E-47 T 22-04-2016 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 PANTHER PTHR30055:SF73 3 212 6.2E-47 T 22-04-2016 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 SUPERFAMILY SSF46689 3 68 6.67E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS09475 861953f97085d4f5fbdded1493a1b0f4 213 SUPERFAMILY SSF48498 81 211 5.34E-45 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 PANTHER PTHR10916 1 63 1.3E-29 T 22-04-2016 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 PANTHER PTHR10916:SF0 1 63 1.3E-29 T 22-04-2016 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.3E-24 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 SUPERFAMILY SSF46561 1 61 4.84E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 Gene3D G3DSA:1.10.287.310 1 60 2.1E-29 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.944 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01165 7f8ef0b90839c34ea050d44c913e2d39 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 Gene3D G3DSA:3.90.79.10 3 115 3.6E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 Pfam PF00293 NUDIX domain 8 110 1.4E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.4E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.4E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 SUPERFAMILY SSF55811 5 112 3.52E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS00075 5aba16a975edd13bdc72e9ed23011a40 133 PANTHER PTHR22769 8 110 1.6E-18 T 22-04-2016 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Pfam PF00583 Acetyltransferase (GNAT) family 809 879 1.8E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SUPERFAMILY SSF52210 136 293 2.22E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 PANTHER PTHR11117 15 713 8.3E-298 T 22-04-2016 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SMART SM00881 9 104 1.6E-30 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Gene3D G3DSA:3.40.50.720 1 136 6.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SUPERFAMILY SSF52210 300 460 6.28E-44 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 PANTHER PTHR11117:SF8 15 713 8.3E-298 T 22-04-2016 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SUPERFAMILY SSF56059 497 701 2.43E-27 T 22-04-2016 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Pfam PF13549 ATP-grasp domain 487 708 1.4E-73 T 22-04-2016 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Pfam PF13380 CoA binding domain 14 140 4.0E-22 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Gene3D G3DSA:3.40.50.261 301 452 2.7E-20 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SUPERFAMILY SSF51735 2 144 6.36E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Gene3D G3DSA:3.40.50.261 137 292 4.2E-28 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Gene3D G3DSA:3.40.630.30 734 894 3.8E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 292 1.5E-54 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SAMA_RS09175 607ec8c4f207497b709de871fa358f98 911 SUPERFAMILY SSF55729 740 887 1.53E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 Gene3D G3DSA:3.40.50.300 28 189 1.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 PANTHER PTHR11603 13 300 8.3E-171 T 22-04-2016 SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 43 173 6.8E-62 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 Gene3D G3DSA:1.10.8.300 205 296 1.2E-25 T 22-04-2016 SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 SUPERFAMILY SSF52540 12 286 1.33E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 PANTHER PTHR11603:SF155 13 300 8.3E-171 T 22-04-2016 SAMA_RS09930 5f8ca45fb3737a644c099f4170b8e157 309 PIRSF PIRSF002849 1 306 1.7E-117 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.0E-36 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.7E-14 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.7E-14 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 7.7E-14 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PANTHER PTHR11922:SF7 1 189 1.4E-85 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 Gene3D G3DSA:3.40.50.880 2 188 1.5E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 SUPERFAMILY SSF52317 1 189 4.59E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.9E-6 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.9E-6 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 1.1E-80 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 PANTHER PTHR11922 1 189 1.4E-85 T 22-04-2016 SAMA_RS15725 9912b2d5862e7b523b8e1361b3da55da 191 Pfam PF00117 Glutamine amidotransferase class-I 4 187 7.2E-50 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS00670 2d43d6c7f5baa5fce2009ef5acb090d1 208 Pfam PF02361 Cobalt transport protein 71 196 1.7E-6 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SAMA_RS02735 f87338842206d17364514f1effe7efed 654 PANTHER PTHR11935 238 473 1.3E-184 T 22-04-2016 SAMA_RS02735 f87338842206d17364514f1effe7efed 654 PANTHER PTHR11935 75 214 1.3E-184 T 22-04-2016 SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Gene3D G3DSA:3.60.15.10 111 212 1.8E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Gene3D G3DSA:3.60.15.10 254 378 1.8E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02735 f87338842206d17364514f1effe7efed 654 SUPERFAMILY SSF56281 24 525 1.96E-154 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Gene3D G3DSA:3.30.1050.10 542 644 2.4E-4 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Pfam PF14863 Alkyl sulfatase dimerisation 387 523 1.9E-60 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Pfam PF00753 Metallo-beta-lactamase superfamily 123 348 1.2E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02735 f87338842206d17364514f1effe7efed 654 SUPERFAMILY SSF55718 533 654 6.77E-31 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS02735 f87338842206d17364514f1effe7efed 654 PANTHER PTHR11935:SF93 238 473 1.3E-184 T 22-04-2016 SAMA_RS02735 f87338842206d17364514f1effe7efed 654 PANTHER PTHR11935:SF93 75 214 1.3E-184 T 22-04-2016 SAMA_RS02735 f87338842206d17364514f1effe7efed 654 SMART SM00849 126 348 9.7E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS02735 f87338842206d17364514f1effe7efed 654 Pfam PF14864 Alkyl sulfatase C-terminal 531 654 1.5E-36 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 PANTHER PTHR24220:SF542 5 215 1.5E-83 T 22-04-2016 SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 SUPERFAMILY SSF52540 4 210 4.23E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 PANTHER PTHR24220 5 215 1.5E-83 T 22-04-2016 SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 SMART SM00382 28 224 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 Pfam PF00005 ABC transporter 21 159 3.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 Gene3D G3DSA:3.40.50.300 6 210 3.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00615 787f96631c46b868b5dd9fd91d14cd98 230 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS00645 d4ea4333ecd2e1d003764094238ed817 219 PANTHER PTHR34300 1 210 3.3E-120 T 22-04-2016 SAMA_RS00645 d4ea4333ecd2e1d003764094238ed817 219 PANTHER PTHR34300:SF1 1 210 3.3E-120 T 22-04-2016 SAMA_RS00645 d4ea4333ecd2e1d003764094238ed817 219 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.2E-37 T 22-04-2016 IPR003744 Protein of unknown function DUF165 SAMA_RS00645 d4ea4333ecd2e1d003764094238ed817 219 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 204 2.2E-60 T 22-04-2016 IPR003744 Protein of unknown function DUF165 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 PANTHER PTHR30363:SF15 3 254 6.8E-134 T 22-04-2016 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 PANTHER PTHR30363 3 254 6.8E-134 T 22-04-2016 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 Gene3D G3DSA:3.40.50.1360 76 220 8.2E-15 T 22-04-2016 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 SUPERFAMILY SSF46785 7 74 4.77E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 Gene3D G3DSA:1.10.10.10 4 51 4.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 SMART SM01134 71 232 7.2E-56 T 22-04-2016 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 Pfam PF00455 DeoR C terminal sensor domain 77 231 4.3E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 SUPERFAMILY SSF100950 76 232 2.85E-32 T 22-04-2016 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 2.7E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 SMART SM00420 9 61 4.1E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.7E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS18925 fbd19814fef90414e01eb1336b5774ab 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.7E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 SUPERFAMILY SSF55920 308 565 2.88E-58 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Pfam PF00557 Metallopeptidase family M24 314 528 2.7E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 PANTHER PTHR10804 287 597 6.9E-258 T 22-04-2016 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 PANTHER PTHR10804 8 185 6.9E-258 T 22-04-2016 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Gene3D G3DSA:3.40.350.10 7 138 5.3E-21 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 SUPERFAMILY SSF53092 6 141 5.41E-14 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Gene3D G3DSA:3.90.230.10 306 566 1.8E-63 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 PANTHER PTHR10804:SF105 287 597 6.9E-258 T 22-04-2016 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 PANTHER PTHR10804:SF105 8 185 6.9E-258 T 22-04-2016 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 1.0E-26 T 22-04-2016 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 144 4.1E-22 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SAMA_RS03610 d1c86758b029e1b3716e57f9303c6b7b 599 Pfam PF16188 C-terminal region of peptidase_M24 540 599 5.2E-24 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain SAMA_RS03815 ea1a3486ab524c828fa1ade02cbcba5c 274 SUPERFAMILY SSF53187 48 267 6.62E-29 T 22-04-2016 SAMA_RS03815 ea1a3486ab524c828fa1ade02cbcba5c 274 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 65 129 2.9E-9 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SAMA_RS03815 ea1a3486ab524c828fa1ade02cbcba5c 274 Gene3D G3DSA:3.40.630.10 10 269 1.7E-43 T 22-04-2016 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PANTHER PTHR11390 1 515 6.8E-166 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PANTHER PTHR11390 533 618 6.8E-166 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 SUPERFAMILY SSF56712 1 618 4.45E-177 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 652 56.167 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 634 1.6E-227 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Gene3D G3DSA:1.10.460.10 158 217 1.4E-48 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Gene3D G3DSA:1.10.460.10 502 618 1.4E-48 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 SMART SM00493 1 124 5.0E-23 T 22-04-2016 IPR006171 Toprim domain SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 SMART SM00436 128 223 4.0E-30 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Pfam PF01131 DNA topoisomerase 157 604 1.7E-105 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.6E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.6E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 533 547 1.6E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 1.6E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.6E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Gene3D G3DSA:2.70.20.10 218 252 8.8E-38 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Gene3D G3DSA:2.70.20.10 370 500 8.8E-38 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Pfam PF01751 Toprim domain 3 120 1.4E-12 T 22-04-2016 IPR006171 Toprim domain SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 SMART SM00437 280 570 1.7E-69 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PANTHER PTHR11390:SF21 1 515 6.8E-166 T 22-04-2016 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 PANTHER PTHR11390:SF21 533 618 6.8E-166 T 22-04-2016 SAMA_RS11205 79a74069abf5b8ca5a197291c9ec11ec 670 Gene3D G3DSA:3.40.50.140 1 154 2.6E-43 T 22-04-2016 IPR006171 Toprim domain SAMA_RS05515 43cb8ae7ccc2278cd3b4887e3072ed85 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 79 8.4E-14 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SAMA_RS05515 43cb8ae7ccc2278cd3b4887e3072ed85 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 29.009 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 PANTHER PTHR10093:SF3 1 127 7.7E-100 T 22-04-2016 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 Gene3D G3DSA:3.90.1010.10 2 126 6.7E-56 T 22-04-2016 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 SUPERFAMILY SSF82649 1 125 9.94E-50 T 22-04-2016 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 PANTHER PTHR10093 1 127 7.7E-100 T 22-04-2016 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.2E-68 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 SAMA_RS06775 62f7e42f4b054e163e61d99ad420c296 127 Pfam PF01592 NifU-like N terminal domain 2 126 2.0E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SAMA_RS08725 7d3fb14ec361aed5a90f0dbc8c15296a 386 PANTHER PTHR30149 17 379 4.9E-188 T 22-04-2016 SAMA_RS08725 7d3fb14ec361aed5a90f0dbc8c15296a 386 Pfam PF01924 Hydrogenase formation hypA family 28 380 5.5E-147 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SAMA_RS08725 7d3fb14ec361aed5a90f0dbc8c15296a 386 PANTHER PTHR30149:SF0 17 379 4.9E-188 T 22-04-2016 SAMA_RS08725 7d3fb14ec361aed5a90f0dbc8c15296a 386 PIRSF PIRSF005622 16 385 1.5E-155 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SAMA_RS08725 7d3fb14ec361aed5a90f0dbc8c15296a 386 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 18 382 9.7E-147 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 SUPERFAMILY SSF53955 175 379 7.31E-68 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 758 3.4E-271 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Gene3D G3DSA:1.20.5.100 28 67 9.1E-11 T 22-04-2016 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 SUPERFAMILY SSF56601 334 356 5.07E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 SUPERFAMILY SSF56601 385 772 5.07E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Pfam PF14814 Bifunctional transglycosylase second domain 85 169 1.3E-21 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Gene3D G3DSA:1.10.3810.10 181 353 3.7E-64 T 22-04-2016 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Gene3D G3DSA:3.40.710.10 354 748 8.7E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 PANTHER PTHR32282 166 751 1.1E-247 T 22-04-2016 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Gene3D G3DSA:3.30.2060.10 83 171 2.3E-22 T 22-04-2016 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 PANTHER PTHR32282:SF11 166 751 1.1E-247 T 22-04-2016 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Pfam PF00912 Transglycosylase 182 351 6.3E-57 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 696 2.9E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SAMA_RS15505 796c4e56ebfc7ed5ee4e6fa0d1f68e5a 779 PIRSF PIRSF002799 4 778 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 SUPERFAMILY SSF56281 6 281 5.6E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 SMART SM00849 43 219 1.7E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 89 108 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 PANTHER PTHR11935 51 221 9.7E-16 T 22-04-2016 SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 Gene3D G3DSA:3.60.15.10 26 235 8.6E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07370 ac7ecc9bbd5df2ee24451dba23a11cc8 288 Pfam PF00753 Metallo-beta-lactamase superfamily 81 218 3.8E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 PIRSF PIRSF006188 14 85 9.7E-34 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 Gene3D G3DSA:1.10.3390.10 14 84 2.4E-33 T 22-04-2016 IPR023202 YejL-like domain SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 Pfam PF07208 Protein of unknown function (DUF1414) 39 82 7.9E-22 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 14 82 2.0E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 Hamap MF_00816 UPF0352 protein YejL [yejL]. 14 84 22.635 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 SAMA_RS08115 64cb5b3f1782429811c45b052c2f0b50 85 SUPERFAMILY SSF158651 14 84 1.7E-27 T 22-04-2016 SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 237 543 22.095 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 SUPERFAMILY SSF53335 260 538 7.59E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 PANTHER PTHR11558 271 502 2.0E-69 T 22-04-2016 SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 Gene3D G3DSA:3.40.50.150 311 538 2.4E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 PANTHER PTHR11558:SF26 271 502 2.0E-69 T 22-04-2016 SAMA_RS13970 cc8159fd49f0877d57c2149f803ff25e 571 Pfam PF01564 Spermine/spermidine synthase 299 506 1.5E-32 T 22-04-2016 SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 SUPERFAMILY SSF56281 1 209 2.71E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 7.5E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 Gene3D G3DSA:3.60.15.10 2 210 5.2E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 SMART SM00849 12 192 1.4E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 PANTHER PTHR11935:SF115 1 212 4.1E-118 T 22-04-2016 SAMA_RS11190 27a012d68826c74e10a3103ad3fefee8 214 PANTHER PTHR11935 1 212 4.1E-118 T 22-04-2016 SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 Pfam PF00270 DEAD/DEAH box helicase 25 196 4.6E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 PANTHER PTHR24031 2 422 4.6E-169 T 22-04-2016 SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 PANTHER PTHR24031:SF261 2 422 4.6E-169 T 22-04-2016 SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 SUPERFAMILY SSF52540 73 358 3.77E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 SMART SM00487 20 223 6.9E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 Gene3D G3DSA:3.40.50.300 221 370 6.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 Pfam PF00271 Helicase conserved C-terminal domain 237 341 6.9E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 Gene3D G3DSA:3.40.50.300 2 220 1.2E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06670 6562d2b6d9c454d05a91a5f21299b388 456 SMART SM00490 260 341 7.0E-31 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 Gene3D G3DSA:3.90.950.10 2 191 8.6E-69 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 Hamap MF_00528 Septum formation protein Maf [maf]. 2 194 31.452 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 PIRSF PIRSF006305 1 194 3.0E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 PANTHER PTHR11746 124 181 1.8E-18 T 22-04-2016 SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 SUPERFAMILY SSF52972 1 189 2.16E-61 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 188 4.0E-55 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS02520 5866dbcbf0a664effd34efb2d0d50482 194 Pfam PF02545 Maf-like protein 3 190 5.4E-58 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS04125 c0d64b7a85b5c1e2bb92c519b5a04772 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 2.9E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS04125 c0d64b7a85b5c1e2bb92c519b5a04772 169 PANTHER PTHR13256 4 148 7.1E-12 T 22-04-2016 SAMA_RS04125 c0d64b7a85b5c1e2bb92c519b5a04772 169 Gene3D G3DSA:3.40.630.30 3 148 6.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS04125 c0d64b7a85b5c1e2bb92c519b5a04772 169 SUPERFAMILY SSF55729 3 148 3.24E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 SUPERFAMILY SSF53901 3 252 4.84E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 Gene3D G3DSA:3.40.47.10 3 260 3.8E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 PIRSF PIRSF000447 1 412 3.0E-199 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.8E-61 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 Gene3D G3DSA:3.40.47.10 263 411 9.4E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 6.7E-200 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 7.3E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.2E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 PANTHER PTHR11712 3 411 1.4E-222 T 22-04-2016 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 SUPERFAMILY SSF53901 214 411 1.92E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10330 a93a2a85aa9a8b0cb6b0f63517906c63 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 PANTHER PTHR24095 41 569 1.7E-193 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Gene3D G3DSA:2.30.38.10 387 460 1.4E-24 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Gene3D G3DSA:3.40.50.980 234 377 2.2E-47 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Gene3D G3DSA:3.40.50.980 32 233 1.1E-39 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 ProSitePatterns PS00455 Putative AMP-binding domain signature. 219 230 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 SUPERFAMILY SSF56801 23 565 1.96E-155 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 553 7.2E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Gene3D G3DSA:3.30.300.30 466 568 4.1E-33 T 22-04-2016 SAMA_RS09965 9cf11a91070cdc196c7b4d7194a3d751 573 Pfam PF00501 AMP-binding enzyme 41 469 1.0E-106 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS03740 d05ea7ea78c00a73970f7513ad172fb1 287 Pfam PF00482 Type II secretion system (T2SS), protein F 150 276 1.7E-18 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS03740 d05ea7ea78c00a73970f7513ad172fb1 287 PANTHER PTHR35007 65 280 1.9E-40 T 22-04-2016 SAMA_RS03740 d05ea7ea78c00a73970f7513ad172fb1 287 PANTHER PTHR35007:SF2 65 280 1.9E-40 T 22-04-2016 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS18015 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS12605 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS03170 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS04795 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS06885 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS15360 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 SUPERFAMILY SSF143422 1 131 1.15E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360 2 146 8.0E-59 T 22-04-2016 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 SMART SM01321 11 130 3.7E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 Pfam PF01797 Transposase IS200 like 12 130 4.1E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 PANTHER PTHR33360:SF2 2 146 8.0E-59 T 22-04-2016 SAMA_RS13620 308d66a4ff10378b3c35188c9a88167b 148 Gene3D G3DSA:3.30.70.1290 1 132 1.9E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 Gene3D G3DSA:3.30.750.24 464 565 2.4E-14 T 22-04-2016 IPR002645 STAS domain SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 ProSitePatterns PS01130 SLC26A transporters signature. 59 80 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 PANTHER PTHR11814 23 236 3.0E-229 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 PANTHER PTHR11814 255 566 3.0E-229 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 Pfam PF01740 STAS domain 464 558 4.9E-10 T 22-04-2016 IPR002645 STAS domain SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 SUPERFAMILY SSF52091 464 565 1.1E-14 T 22-04-2016 IPR002645 STAS domain SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 Pfam PF00916 Sulfate permease family 30 415 1.4E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 PANTHER PTHR11814:SF112 23 236 3.0E-229 T 22-04-2016 SAMA_RS05595 15b4b54906d685a76e3f34a4708de02f 572 PANTHER PTHR11814:SF112 255 566 3.0E-229 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.627 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 2.7E-155 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 7.7E-46 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Gene3D G3DSA:3.40.50.800 327 422 1.0E-31 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Gene3D G3DSA:3.30.930.10 221 321 1.3E-96 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Gene3D G3DSA:3.30.930.10 4 185 1.3E-96 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 PIRSF PIRSF001549 2 423 1.7E-119 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 SUPERFAMILY SSF52954 327 423 2.13E-24 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 SUPERFAMILY SSF55681 5 321 2.68E-103 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 PANTHER PTHR11476:SF9 2 424 1.3E-222 T 22-04-2016 SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 Pfam PF03129 Anticodon binding domain 330 422 2.3E-11 T 22-04-2016 IPR004154 Anticodon-binding SAMA_RS12365 235f8931aefce34e89d10062860eb6ae 424 PANTHER PTHR11476 2 424 1.3E-222 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SAMA_RS05820 9adc03c80cc099225ba4c75cfae05985 234 Pfam PF13175 AAA ATPase domain 11 64 8.1E-11 T 22-04-2016 SAMA_RS05820 9adc03c80cc099225ba4c75cfae05985 234 SUPERFAMILY SSF52540 18 84 9.31E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05820 9adc03c80cc099225ba4c75cfae05985 234 Gene3D G3DSA:3.40.50.300 18 85 1.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 1008 8.2E-177 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.170.130.10 75 177 1.1E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 PANTHER PTHR40980:SF2 827 1008 6.4E-65 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 PANTHER PTHR40980:SF2 30 798 6.4E-65 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 SUPERFAMILY SSF56935 43 243 5.19E-85 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 SUPERFAMILY SSF56935 586 781 5.19E-85 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 SUPERFAMILY SSF56935 844 1008 5.19E-85 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 SUPERFAMILY SSF56935 306 523 5.19E-85 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 816 1008 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 681 780 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 178 246 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 283 422 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 458 537 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Gene3D G3DSA:2.40.170.20 596 643 5.2E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 PANTHER PTHR40980 827 1008 6.4E-65 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 PANTHER PTHR40980 30 798 6.4E-65 T 22-04-2016 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Pfam PF00593 TonB dependent receptor 689 1007 3.3E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07280 480f8378e3787e6ab5d5566d8fc6c35b 1008 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 174 2.2E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 Gene3D G3DSA:3.40.50.300 1 222 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 SUPERFAMILY SSF52540 2 223 5.02E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 Pfam PF00005 ABC transporter 18 162 3.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 PANTHER PTHR24220:SF571 3 243 7.5E-128 T 22-04-2016 SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 SMART SM00382 26 208 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06220 f2890c5f51b08751c090cd37f734d9f9 293 PANTHER PTHR24220 3 243 7.5E-128 T 22-04-2016 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 SMART SM00962 100 296 1.0E-116 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.4E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.0E-74 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 441 34.38 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Gene3D G3DSA:1.10.260.30 328 432 9.5E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 3.0E-178 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 SMART SM00382 99 247 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Gene3D G3DSA:1.20.120.140 2 88 2.5E-35 T 22-04-2016 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 SUPERFAMILY SSF52540 42 351 2.35E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Pfam PF02978 Signal peptide binding domain 328 428 7.1E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 PANTHER PTHR11564:SF7 1 437 2.8E-272 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 SUPERFAMILY SSF47446 298 432 2.22E-45 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 PANTHER PTHR11564 1 437 2.8E-272 T 22-04-2016 SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 Gene3D G3DSA:3.40.50.300 93 297 5.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04640 90ccf94fa6f0209183f7edfdacf8c9a5 457 SMART SM00963 1 86 1.4E-35 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 SUPERFAMILY SSF55658 1 57 3.49E-18 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 SUPERFAMILY SSF55653 61 149 1.7E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.146 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 Gene3D G3DSA:3.10.430.100 61 149 2.8E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 8.8E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.0E-52 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.4E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 Gene3D G3DSA:3.40.5.10 1 52 3.0E-24 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SAMA_RS15980 e3e953cc6420ef72c5ee3f34de15214d 149 PANTHER PTHR21368 1 149 1.9E-49 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1443 1542 5.75E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1755 1856 1.9E-14 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 2822 2842 4.7E-4 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 PANTHER PTHR34720 2192 2807 3.9E-26 T 22-04-2016 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1895 1998 7.85E-15 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1276 1367 1.28E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 PANTHER PTHR34720:SF1 2192 2807 3.9E-26 T 22-04-2016 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 863 908 6.93E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF51126 940 1230 1.82E-15 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 790 858 3.53E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 863 932 5.9E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1258 1277 5.9E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1821 1923 7.8E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1397 1503 1.4E-22 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1611 1714 2.0E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 2031 2139 5.9E-21 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1715 1820 8.1E-21 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1924 2030 2.7E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 789 854 1.3E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1504 1610 3.5E-23 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Gene3D G3DSA:4.10.1080.10 1280 1396 9.3E-24 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 Pfam PF02412 Thrombospondin type 3 repeat 1408 1438 0.022 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 2035 2140 1.83E-14 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1512 1614 1.83E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS19115 a41a20594beb6c4b7691db9ccee28033 2848 SUPERFAMILY SSF103647 1367 1439 4.97E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 272 4.4E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS12255 312e0461887f2ae6140d158057791830 370 PANTHER PTHR30469 40 364 1.6E-66 T 22-04-2016 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 PANTHER PTHR30469:SF11 40 364 1.6E-66 T 22-04-2016 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 363 6.4E-56 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 SUPERFAMILY SSF111369 56 272 2.48E-20 T 22-04-2016 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 Gene3D G3DSA:2.40.50.100 175 207 7.8E-11 T 22-04-2016 SAMA_RS12255 312e0461887f2ae6140d158057791830 370 Gene3D G3DSA:2.40.50.100 70 100 7.8E-11 T 22-04-2016 SAMA_RS14015 a779e38e6643babb6562d6631edc1eec 200 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 25 198 8.8E-44 T 22-04-2016 IPR016476 SH3 domain protein SAMA_RS14015 a779e38e6643babb6562d6631edc1eec 200 Pfam PF08239 Bacterial SH3 domain 33 83 9.3E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type SAMA_RS14015 a779e38e6643babb6562d6631edc1eec 200 PIRSF PIRSF006158 1 199 3.6E-54 T 22-04-2016 IPR016476 SH3 domain protein SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 SUPERFAMILY SSF58104 30 245 7.85E-40 T 22-04-2016 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 Gene3D G3DSA:1.10.287.950 68 244 1.2E-37 T 22-04-2016 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 PANTHER PTHR32089:SF1 96 243 1.7E-36 T 22-04-2016 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 PANTHER PTHR32089 96 243 1.7E-36 T 22-04-2016 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 240 2.2E-27 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 Pfam PF13682 Chemoreceptor zinc-binding domain 258 322 7.5E-15 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SAMA_RS16595 ef5b598bdf9e6b1d698023371aa52cf0 360 SMART SM00283 34 264 1.1E-10 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 262 34.865 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 PANTHER PTHR37838 1 265 1.3E-87 T 22-04-2016 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 PIRSF PIRSF009437 1 265 1.3E-101 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 PANTHER PTHR37838:SF1 1 265 1.3E-87 T 22-04-2016 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 SMART SM00900 149 250 5.5E-30 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 Pfam PF04205 FMN-binding domain 149 247 2.9E-11 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS13235 57a978a86345ae8aca94abac1967c715 265 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 257 3.2E-82 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 151 9.5E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 SUPERFAMILY SSF56935 29 691 3.14E-126 T 22-04-2016 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 Gene3D G3DSA:2.40.170.20 166 691 5.2E-124 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 688 8.0E-105 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 PANTHER PTHR32552:SF10 3 691 3.8E-117 T 22-04-2016 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 Gene3D G3DSA:2.170.130.10 44 159 5.4E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 PANTHER PTHR32552 3 691 3.8E-117 T 22-04-2016 SAMA_RS17755 8ddb58a1fae537e83508993ae0868d07 691 Pfam PF00593 TonB dependent receptor 454 689 2.1E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 Pfam PF00035 Double-stranded RNA binding motif 157 224 2.5E-13 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 Gene3D G3DSA:1.10.1520.10 7 148 2.4E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 SMART SM00358 157 225 6.3E-21 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 29.439 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 PANTHER PTHR11207 7 225 8.8E-94 T 22-04-2016 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 SUPERFAMILY SSF54768 110 224 8.64E-26 T 22-04-2016 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 Pfam PF14622 Ribonuclease-III-like 21 138 5.9E-34 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 SMART SM00535 22 150 6.4E-57 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 223 2.3E-73 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 Gene3D G3DSA:3.30.160.20 154 225 4.1E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS04600 9277f9452de7434d670df21e6f6f97c0 226 SUPERFAMILY SSF69065 5 159 1.31E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 Gene3D G3DSA:3.10.25.10 205 251 7.1E-7 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 SUPERFAMILY SSF50486 203 272 5.81E-11 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 Pfam PF02911 Formyl transferase, C-terminal domain 203 267 5.7E-8 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 PANTHER PTHR11138 54 253 1.3E-32 T 22-04-2016 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 SUPERFAMILY SSF53328 2 203 9.29E-38 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 Gene3D G3DSA:3.40.50.170 10 198 3.8E-35 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS11770 b61f01078c86d18e48dc65b04d80c477 276 Pfam PF00551 Formyl transferase 54 174 3.5E-20 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.520.10 435 592 1.3E-62 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.520.10 717 738 1.3E-62 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.420.10 251 274 3.1E-43 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.420.10 311 410 3.1E-43 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PANTHER PTHR30555 1 738 0.0 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Pfam PF00141 Peroxidase 83 398 1.4E-52 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Pfam PF00141 Peroxidase 406 712 3.0E-38 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PANTHER PTHR30555:SF5 1 738 0.0 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 SUPERFAMILY SSF48113 28 432 2.83E-147 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.520.10 227 250 5.2E-69 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.520.10 53 195 5.2E-69 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00458 Haem peroxidase superfamily signature 644 659 9.8E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00458 Haem peroxidase superfamily signature 174 186 9.8E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00458 Haem peroxidase superfamily signature 96 110 9.8E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 9.8E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00458 Haem peroxidase superfamily signature 156 173 9.8E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 483 509 5.1E-43 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 73 98 5.1E-43 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 58 71 5.1E-43 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 32 54 5.1E-43 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 5.1E-43 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Hamap MF_01961 Catalase-peroxidase [katG]. 19 738 40.751 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 23 738 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 Gene3D G3DSA:1.10.420.10 593 714 4.6E-45 T 22-04-2016 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 SUPERFAMILY SSF48113 433 737 5.01E-111 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 SAMA_RS03915 6fddf28dfa1544f6b7b13ccc1e27cbb5 738 ProSitePatterns PS00436 Peroxidases active site signature. 96 107 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 SUPERFAMILY SSF74653 275 357 5.76E-20 T 22-04-2016 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 Gene3D G3DSA:1.25.40.10 196 262 2.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 Gene3D G3DSA:1.25.40.10 127 146 2.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 PANTHER PTHR33446 213 361 6.3E-21 T 22-04-2016 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 282 358 6.4E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 283 359 2.8E-10 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS12765 e5e666c63172e37c39dc083c1b936523 361 Gene3D G3DSA:3.30.1150.10 280 360 2.2E-8 T 22-04-2016 SAMA_RS14405 74e082fad16e9936d394d07b34dfd881 246 Pfam PF04338 Protein of unknown function, DUF481 35 246 2.8E-68 T 22-04-2016 IPR007433 Protein of unknown function DUF481 SAMA_RS14405 74e082fad16e9936d394d07b34dfd881 246 Gene3D G3DSA:2.40.170.20 44 117 6.1E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS14405 74e082fad16e9936d394d07b34dfd881 246 Gene3D G3DSA:2.40.170.20 160 190 6.1E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PANTHER PTHR22594 372 571 6.1E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PANTHER PTHR22594 1 298 6.1E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.844 T 22-04-2016 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PANTHER PTHR22594:SF5 372 571 6.1E-252 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PANTHER PTHR22594:SF5 1 298 6.1E-252 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 SUPERFAMILY SSF50249 1 105 2.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Gene3D G3DSA:3.30.1360.30 278 415 7.5E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Gene3D G3DSA:2.40.50.140 1 106 3.7E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 SUPERFAMILY SSF55681 426 584 1.08E-104 T 22-04-2016 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 SUPERFAMILY SSF55681 114 293 1.08E-104 T 22-04-2016 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Pfam PF02938 GAD domain 309 408 2.5E-30 T 22-04-2016 IPR029351 GAD domain SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 SUPERFAMILY SSF55261 290 421 1.61E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 558 1.6E-106 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Gene3D G3DSA:3.30.930.10 416 583 1.9E-110 T 22-04-2016 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Gene3D G3DSA:3.30.930.10 133 277 1.9E-110 T 22-04-2016 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 6.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 6.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 3.8E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SAMA_RS09650 1a1e5cd8184d854b3693a4717f4bbbf7 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.5E-252 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 353 360 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PRINTS PR00481 Cytosol aminopeptidase signature 267 284 4.1E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PRINTS PR00481 Cytosol aminopeptidase signature 290 311 4.1E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PRINTS PR00481 Cytosol aminopeptidase signature 349 369 4.1E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PRINTS PR00481 Cytosol aminopeptidase signature 378 393 4.1E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PRINTS PR00481 Cytosol aminopeptidase signature 327 348 4.1E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 SUPERFAMILY SSF52949 25 180 2.94E-14 T 22-04-2016 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PANTHER PTHR11963 50 506 9.3E-164 T 22-04-2016 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 Gene3D G3DSA:3.40.630.10 181 504 2.7E-121 T 22-04-2016 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 PANTHER PTHR11963:SF13 50 506 9.3E-164 T 22-04-2016 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 SUPERFAMILY SSF53187 190 503 2.51E-108 T 22-04-2016 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 194 498 6.2E-113 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 24 507 32.259 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 49 161 4.0E-11 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS03275 084d3142b227b7543db36979d978f6ec 508 Gene3D G3DSA:3.40.220.10 27 168 1.2E-16 T 22-04-2016 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.823 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 Pfam PF01467 Cytidylyltransferase-like 6 134 2.0E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 1.3E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.008 T 22-04-2016 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 SUPERFAMILY SSF52374 4 154 4.02E-45 T 22-04-2016 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 155 5.7E-60 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PANTHER PTHR21342:SF1 1 156 1.8E-81 T 22-04-2016 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PANTHER PTHR21342 1 156 1.8E-81 T 22-04-2016 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SAMA_RS00555 683e3b60d56cb98e45ff141e9c36c490 161 Gene3D G3DSA:3.40.50.620 2 154 2.0E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 PANTHER PTHR21071 1 334 2.4E-164 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Gene3D G3DSA:3.30.465.10 72 229 6.7E-53 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 206 328 2.0E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 337 83.779 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Gene3D G3DSA:3.90.78.10 230 331 1.2E-44 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 SUPERFAMILY SSF56194 204 331 3.4E-48 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 328 1.3E-86 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 SUPERFAMILY SSF56176 4 195 3.98E-43 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 PANTHER PTHR21071:SF6 1 334 2.4E-164 T 22-04-2016 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Gene3D G3DSA:3.30.43.10 3 65 2.8E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SAMA_RS01020 4664b04279e172255fe976d56bd093f4 337 Pfam PF01565 FAD binding domain 21 140 2.5E-22 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SAMA_RS18780 4c4ca9b2cb440706246948292e4a16c3 221 PANTHER PTHR34227:SF4 1 206 1.0E-105 T 22-04-2016 SAMA_RS18780 4c4ca9b2cb440706246948292e4a16c3 221 PANTHER PTHR34227 1 206 1.0E-105 T 22-04-2016 SAMA_RS18780 4c4ca9b2cb440706246948292e4a16c3 221 SUPERFAMILY SSF89155 7 198 8.89E-55 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS18780 4c4ca9b2cb440706246948292e4a16c3 221 Pfam PF02613 Nitrate reductase delta subunit 45 163 4.4E-27 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS18780 4c4ca9b2cb440706246948292e4a16c3 221 Gene3D G3DSA:1.10.3480.10 9 195 1.2E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 Gene3D G3DSA:3.40.630.10 51 185 2.3E-9 T 22-04-2016 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 SUPERFAMILY SSF53187 10 340 8.06E-82 T 22-04-2016 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 10 340 7.9E-104 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 348 158.414 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 PANTHER PTHR15162 9 340 5.2E-68 T 22-04-2016 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 55 341 6.2E-65 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SAMA_RS08910 d1042568568af0a71ca70fe7e19629c5 348 PIRSF PIRSF017020 5 348 4.6E-129 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 PANTHER PTHR34134 1 131 1.0E-32 T 22-04-2016 SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 SUPERFAMILY SSF46785 7 126 6.23E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 Gene3D G3DSA:1.10.10.10 5 83 2.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 Pfam PF03965 Penicillinase repressor 9 122 2.0E-34 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 PANTHER PTHR34134:SF1 1 131 1.0E-32 T 22-04-2016 SAMA_RS17395 0bb3906cab8427324d9d6769c1beef72 131 PIRSF PIRSF019455 1 131 3.9E-40 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 Gene3D G3DSA:3.90.550.10 7 286 7.5E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 SUPERFAMILY SSF53448 6 288 4.06E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 PANTHER PTHR22572:SF118 8 298 6.8E-132 T 22-04-2016 SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 Pfam PF00483 Nucleotidyl transferase 8 279 1.2E-25 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 PANTHER PTHR22572 8 298 6.8E-132 T 22-04-2016 SAMA_RS11660 91da31a60a4df27ae7a9010e22c4fb6b 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 275 9.5E-112 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SAMA_RS11980 0b7fd32afb3152db6e8eae87a8014d10 124 PANTHER PTHR38766 8 105 6.9E-23 T 22-04-2016 SAMA_RS11980 0b7fd32afb3152db6e8eae87a8014d10 124 PANTHER PTHR38766:SF1 8 105 6.9E-23 T 22-04-2016 SAMA_RS11980 0b7fd32afb3152db6e8eae87a8014d10 124 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 101 3.8E-20 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SAMA_RS11980 0b7fd32afb3152db6e8eae87a8014d10 124 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 118 4.6E-14 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SAMA_RS19140 4fa1a0fad9517579bcd3517f1089b336 342 SUPERFAMILY SSF56112 154 327 3.96E-29 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS19140 4fa1a0fad9517579bcd3517f1089b336 342 SUPERFAMILY SSF56112 39 121 3.96E-29 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS19140 4fa1a0fad9517579bcd3517f1089b336 342 Pfam PF01636 Phosphotransferase enzyme family 41 291 1.2E-21 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS19140 4fa1a0fad9517579bcd3517f1089b336 342 Gene3D G3DSA:3.90.1200.10 178 331 1.4E-15 T 22-04-2016 SAMA_RS12650 20baea3c84cb3ccdfd933a648b1d4b56 129 Pfam PF11399 Protein of unknown function (DUF3192) 21 120 1.0E-41 T 22-04-2016 IPR021534 Protein of unknown function DUF3192 SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 SUPERFAMILY SSF52540 4 336 1.65E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 Gene3D G3DSA:3.40.50.300 101 344 9.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 Pfam PF00437 Type II/IV secretion system protein 105 270 2.3E-38 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 PANTHER PTHR30486:SF3 1 370 2.4E-170 T 22-04-2016 SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 PANTHER PTHR30486 1 370 2.4E-170 T 22-04-2016 SAMA_RS12920 4ad7b4ac72ba38e7ba0a4e6a942572a6 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 344 1.7E-132 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 PANTHER PTHR30109 2 552 2.7E-294 T 22-04-2016 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Gene3D G3DSA:1.20.1270.20 162 235 7.0E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 PIRSF PIRSF000076 1 553 1.2E-241 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.3E-164 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 6.5E-228 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Gene3D G3DSA:3.40.50.2030 237 382 1.0E-65 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 PANTHER PTHR30109:SF0 2 552 2.7E-294 T 22-04-2016 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Gene3D G3DSA:3.40.50.2030 383 550 9.4E-72 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Gene3D G3DSA:1.20.1270.20 2 109 9.9E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Gene3D G3DSA:1.20.1270.20 141 161 9.9E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 SUPERFAMILY SSF56821 1 552 5.34E-197 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 SAMA_RS04675 84d43d26e040f101601b54e3ac74673c 554 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.859 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.651 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 PANTHER PTHR21109 1 71 9.5E-25 T 22-04-2016 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 Pfam PF01165 Ribosomal protein S21 4 56 8.5E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.7E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.7E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.7E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.7E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 9.0E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.2E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SAMA_RS04330 36aabed2793c6ff066e236c4b6b8c75a 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 Gene3D G3DSA:3.40.50.2300 2 120 1.9E-35 T 22-04-2016 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 220 4.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 SMART SM00862 144 220 5.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 PANTHER PTHR26402 3 221 6.1E-84 T 22-04-2016 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 SMART SM00448 3 113 2.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 Pfam PF00072 Response regulator receiver domain 5 114 3.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 Gene3D G3DSA:1.10.10.10 130 221 9.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 SUPERFAMILY SSF52172 4 119 5.83E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 PANTHER PTHR26402:SF530 3 221 6.1E-84 T 22-04-2016 SAMA_RS05780 19029d06d796c108a12d47bd5bd1be97 222 SUPERFAMILY SSF46894 130 221 9.43E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.301 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 PANTHER PTHR30335 2 202 1.8E-139 T 22-04-2016 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 200 3.3E-103 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 PIRSF PIRSF006102 1 202 2.8E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 PANTHER PTHR30335:SF1 2 202 1.8E-139 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13225 84b2bf7cb6378437cc2661bb1323f1ee 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 1.8E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 Gene3D G3DSA:1.10.10.60 119 174 5.2E-26 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 Pfam PF02954 Bacterial regulatory protein, Fis family 135 172 1.5E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 Pfam PF00072 Response regulator receiver domain 5 113 7.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 SUPERFAMILY SSF52172 1 114 1.85E-27 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 SMART SM00448 2 113 7.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 PANTHER PTHR26402:SF344 2 113 2.1E-33 T 22-04-2016 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 Gene3D G3DSA:3.40.50.2300 2 113 6.6E-25 T 22-04-2016 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 SUPERFAMILY SSF46689 85 172 5.02E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 PANTHER PTHR26402 2 113 2.1E-33 T 22-04-2016 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 156 175 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS16600 113a9ff70793aebd5d81217335e2ea3f 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 139 156 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 Gene3D G3DSA:1.10.3860.10 7 413 2.3E-139 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 Pfam PF00375 Sodium:dicarboxylate symporter family 11 407 7.9E-138 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 SUPERFAMILY SSF118215 11 409 4.97E-126 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PANTHER PTHR11958 8 419 4.4E-171 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 335 354 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 198 217 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 362 382 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06890 010f1695047348e87766febf126b06fc 437 PRINTS PR00173 Glutamate-aspartate symporter signature 300 326 2.3E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 PANTHER PTHR37839 1 444 8.4E-205 T 22-04-2016 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 254 2.2E-110 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 444 2.0E-179 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 Pfam PF11973 NQRA C-terminal domain 259 308 1.5E-17 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 444 44.974 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS13245 40cf7d3b33964bd0b3051d9710039bad 444 PANTHER PTHR37839:SF1 1 444 8.4E-205 T 22-04-2016 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 27 43 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 273 288 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 294 311 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 346 359 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 199 226 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 162 173 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 127 139 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PRINTS PR00992 Alanine racemase signature 256 271 5.6E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 Gene3D G3DSA:3.20.20.10 13 218 1.5E-75 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 Gene3D G3DSA:2.40.37.10 219 360 1.2E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PANTHER PTHR30511:SF4 5 361 1.5E-213 T 22-04-2016 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 Pfam PF01168 Alanine racemase, N-terminal domain 9 226 4.0E-72 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 Hamap MF_01201 Alanine racemase. 2 364 35.206 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 SUPERFAMILY SSF51419 9 241 1.03E-68 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 TIGRFAM TIGR00492 alr: alanine racemase 7 361 5.5E-125 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 SUPERFAMILY SSF50621 233 360 4.19E-46 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 Pfam PF00842 Alanine racemase, C-terminal domain 240 360 6.3E-39 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 PANTHER PTHR30511 5 361 1.5E-213 T 22-04-2016 SAMA_RS15960 e796ed25597caadb1c4b1805cf296f79 364 SMART SM01005 240 364 5.5E-64 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 SUPERFAMILY SSF50621 252 390 2.3E-29 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 389 1.6E-16 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PANTHER PTHR11482:SF6 3 390 8.5E-125 T 22-04-2016 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 275 3.3E-55 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 5.1E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 5.1E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 5.1E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 181 194 5.1E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 Gene3D G3DSA:3.20.20.10 41 261 6.0E-63 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 SUPERFAMILY SSF51419 30 277 7.66E-63 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01182 Ornithine decarboxylase signature 56 83 1.4E-16 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01182 Ornithine decarboxylase signature 30 54 1.4E-16 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01182 Ornithine decarboxylase signature 100 124 1.4E-16 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01182 Ornithine decarboxylase signature 333 343 1.4E-16 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PRINTS PR01182 Ornithine decarboxylase signature 130 152 1.4E-16 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 220 233 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 PANTHER PTHR11482 3 390 8.5E-125 T 22-04-2016 SAMA_RS02215 8f871ce18eccba09af7c2acb949211cc 391 Gene3D G3DSA:2.40.37.10 262 390 7.9E-27 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 SUPERFAMILY SSF46689 8 72 9.48E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 PANTHER PTHR30055:SF27 3 168 2.7E-31 T 22-04-2016 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 Gene3D G3DSA:1.10.357.10 8 204 2.1E-51 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 PANTHER PTHR30055 3 168 2.7E-31 T 22-04-2016 SAMA_RS12250 01efcaef3f1e136745bee005a95adde8 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 5.8E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 223 6.0E-69 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 SMART SM00479 9 187 7.8E-45 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 Gene3D G3DSA:3.30.420.10 7 187 3.1E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 SUPERFAMILY SSF53098 6 188 1.9E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 PANTHER PTHR30231 1 241 1.1E-115 T 22-04-2016 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 Pfam PF00929 Exonuclease 11 178 5.5E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 9 241 3.5E-86 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09845 3eb2ebfa9c777e2d70354a0c3799580a 242 PANTHER PTHR30231:SF0 1 241 1.1E-115 T 22-04-2016 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 Gene3D G3DSA:3.40.50.1100 43 134 7.2E-38 T 22-04-2016 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 Gene3D G3DSA:3.40.50.1100 135 312 5.8E-72 T 22-04-2016 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.0E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 PANTHER PTHR10314:SF110 3 312 2.0E-159 T 22-04-2016 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 SUPERFAMILY SSF53686 4 310 7.99E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 PANTHER PTHR10314 3 312 2.0E-159 T 22-04-2016 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 2.8E-135 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SAMA_RS07845 94d73f176c86edaa578bc04355cfcd8a 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.2E-143 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 Gene3D G3DSA:3.30.360.10 163 318 3.3E-67 T 22-04-2016 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 5.0E-125 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 154 1.3E-57 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PANTHER PTHR10836:SF50 1 335 5.8E-190 T 22-04-2016 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 SUPERFAMILY SSF55347 154 317 3.27E-64 T 22-04-2016 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 5.2E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.2E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 5.2E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 5.2E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 5.2E-36 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 Gene3D G3DSA:3.40.50.720 1 162 5.5E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PANTHER PTHR10836 1 335 5.8E-190 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 SUPERFAMILY SSF51735 1 179 2.67E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 PIRSF PIRSF000149 1 337 5.5E-137 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 316 4.8E-60 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09435 09f8852fb364f0443e26f274d5f7473d 337 SMART SM00846 3 154 1.0E-91 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 Pfam PF01739 CheR methyltransferase, SAM binding domain 69 257 6.3E-66 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 SUPERFAMILY SSF53335 69 258 9.3E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 56 6.0E-16 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PIRSF PIRSF000410 1 261 2.3E-102 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 SUPERFAMILY SSF47757 1 68 3.53E-19 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 Gene3D G3DSA:1.10.155.10 1 67 2.4E-23 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 SMART SM00138 3 261 1.0E-103 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 Gene3D G3DSA:3.40.50.150 68 258 5.3E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PANTHER PTHR24422 1 258 1.5E-99 T 22-04-2016 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 201 215 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 220 243 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 62 74 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 100 120 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 1.8E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS18190 d2befa7f23435d28aa2e1cddd7739859 273 PANTHER PTHR24422:SF13 1 258 1.5E-99 T 22-04-2016 SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 SMART SM00487 20 221 1.9E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 SUPERFAMILY SSF52540 73 359 7.16E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 Pfam PF00270 DEAD/DEAH box helicase 26 193 1.6E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 Gene3D G3DSA:3.40.50.300 1 210 6.8E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 PANTHER PTHR24031:SF0 1 481 4.6E-196 T 22-04-2016 SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 524 48.956 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 SMART SM00490 257 338 8.8E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 Pfam PF00271 Helicase conserved C-terminal domain 234 338 1.3E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 PANTHER PTHR24031 1 481 4.6E-196 T 22-04-2016 SAMA_RS14075 6e81ec810558428ae46d06d6f1a2c717 533 Gene3D G3DSA:3.40.50.300 211 372 6.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 7.3E-56 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Pfam PF03471 Transporter associated domain 496 560 6.4E-7 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 SMART SM01091 492 571 9.5E-9 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Gene3D G3DSA:3.30.465.10 498 559 1.9E-6 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Pfam PF02080 TrkA-C domain 417 483 3.2E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 572 50.007 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 SUPERFAMILY SSF116726 409 483 3.14E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 PANTHER PTHR32507:SF7 1 569 3.9E-253 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 Gene3D G3DSA:3.30.70.1450 414 484 1.6E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 PANTHER PTHR32507 1 569 3.9E-253 T 22-04-2016 SAMA_RS03835 e9aa1a8ccb7022b0dd065b48c9e2783d 572 SUPERFAMILY SSF56176 498 564 1.88E-6 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS12860 a49a444b6dd3350d642690644848ea39 210 Pfam PF03458 UPF0126 domain 10 83 2.4E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SAMA_RS12860 a49a444b6dd3350d642690644848ea39 210 Pfam PF03458 UPF0126 domain 95 167 1.7E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SAMA_RS12860 a49a444b6dd3350d642690644848ea39 210 PANTHER PTHR30506 1 210 2.4E-109 T 22-04-2016 SAMA_RS12860 a49a444b6dd3350d642690644848ea39 210 PANTHER PTHR30506:SF2 1 210 2.4E-109 T 22-04-2016 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PANTHER PTHR30485:SF0 8 218 1.8E-63 T 22-04-2016 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PANTHER PTHR30485 8 218 1.8E-63 T 22-04-2016 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 SUPERFAMILY SSF81342 8 216 6.44E-31 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 17 34 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 205 218 7.5E-31 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 174 196 7.5E-31 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 125 144 7.5E-31 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 14 37 7.5E-31 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 51 75 7.5E-31 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 Gene3D G3DSA:1.20.950.20 11 214 4.8E-30 T 22-04-2016 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 218 7.2E-74 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SAMA_RS08755 64b928c194911225a0bdeca6d9ba83d1 219 Pfam PF01292 Prokaryotic cytochrome b561 13 213 5.8E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 SUPERFAMILY SSF52096 15 195 1.17E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 SUPERFAMILY SSF52096 264 340 1.17E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 352 3.7E-111 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 PANTHER PTHR11941:SF53 264 337 2.2E-100 T 22-04-2016 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 PANTHER PTHR11941:SF53 17 195 2.2E-100 T 22-04-2016 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 PANTHER PTHR11941 264 337 2.2E-100 T 22-04-2016 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 PANTHER PTHR11941 17 195 2.2E-100 T 22-04-2016 SAMA_RS07190 ba81066b70e031c6d4af86adb223e4f9 368 Gene3D G3DSA:3.90.226.10 12 207 4.8E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 SMART SM00089 617 695 8.9E-21 T 22-04-2016 IPR022409 PKD/Chitinase domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 SUPERFAMILY SSF49299 613 692 5.23E-22 T 22-04-2016 IPR000601 PKD domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 346 490 1.2E-35 T 22-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 205 343 2.1E-39 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 525 589 1.4E-9 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Gene3D G3DSA:3.10.170.10 198 347 2.1E-50 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Gene3D G3DSA:2.60.40.670 614 696 8.9E-22 T 22-04-2016 IPR000601 PKD domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PANTHER PTHR33794:SF1 50 605 9.1E-126 T 22-04-2016 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Gene3D G3DSA:1.10.390.10 348 492 3.4E-48 T 22-04-2016 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF03413 Peptidase propeptide and YPEB domain 114 188 1.0E-9 T 22-04-2016 IPR025711 PepSY domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 417 433 3.1E-26 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 334 350 3.1E-26 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 300 320 3.1E-26 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 355 366 3.1E-26 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF00801 PKD domain 625 683 8.6E-13 T 22-04-2016 IPR000601 PKD domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 51 90 1.5E-4 T 22-04-2016 IPR011096 FTP domain SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 PANTHER PTHR33794 50 605 9.1E-126 T 22-04-2016 SAMA_RS02310 3fe42c47b7ec29081547a6ec1bd86de1 775 SUPERFAMILY SSF55486 198 491 4.94E-87 T 22-04-2016 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 PANTHER PTHR30146 9 337 3.0E-91 T 22-04-2016 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 Gene3D G3DSA:1.10.260.40 10 61 1.1E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 Gene3D G3DSA:3.40.50.2300 181 312 1.3E-40 T 22-04-2016 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 1.8E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 SUPERFAMILY SSF47413 8 68 1.69E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 Gene3D G3DSA:3.40.50.2300 62 180 5.7E-33 T 22-04-2016 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 SMART SM00354 9 79 5.7E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 70 311 1.3E-30 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SAMA_RS03010 0304918e6d7590ab3e1f95a6b46fc66c 339 SUPERFAMILY SSF53822 66 329 4.04E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS09935 f85c9390aefb0dcc6f7c1d36d8dc5cbf 308 PANTHER PTHR34351 9 305 4.1E-49 T 22-04-2016 SAMA_RS09935 f85c9390aefb0dcc6f7c1d36d8dc5cbf 308 PANTHER PTHR34351:SF1 9 305 4.1E-49 T 22-04-2016 SAMA_RS09935 f85c9390aefb0dcc6f7c1d36d8dc5cbf 308 Pfam PF01882 Protein of unknown function DUF58 210 281 4.2E-6 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 SUPERFAMILY SSF52467 189 363 1.33E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Gene3D G3DSA:3.40.50.1220 190 358 2.4E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 SUPERFAMILY SSF52518 3 180 3.85E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.2E-276 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 2.4E-51 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Gene3D G3DSA:3.40.50.970 359 557 3.8E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Gene3D G3DSA:3.40.50.970 2 179 2.6E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 2.2E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 PANTHER PTHR18968 2 573 0.0 T 22-04-2016 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 330 4.0E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 SUPERFAMILY SSF52518 369 569 4.65E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 PANTHER PTHR18968:SF116 2 573 0.0 T 22-04-2016 SAMA_RS10530 8638b03c37760184368add83229d9e8d 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SAMA_RS10610 8d6fda9dd538d631881a0684c00740c2 202 SUPERFAMILY SSF53335 35 188 1.53E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10610 8d6fda9dd538d631881a0684c00740c2 202 PANTHER PTHR10108:SF820 26 189 8.8E-28 T 22-04-2016 SAMA_RS10610 8d6fda9dd538d631881a0684c00740c2 202 Pfam PF08241 Methyltransferase domain 43 138 2.4E-24 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SAMA_RS10610 8d6fda9dd538d631881a0684c00740c2 202 PANTHER PTHR10108 26 189 8.8E-28 T 22-04-2016 SAMA_RS10610 8d6fda9dd538d631881a0684c00740c2 202 Gene3D G3DSA:3.40.50.150 26 186 2.0E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 SUPERFAMILY SSF141868 555 803 5.36E-83 T 22-04-2016 IPR001633 EAL domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 SUPERFAMILY SSF55073 384 542 3.69E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 PANTHER PTHR10799:SF774 268 650 4.3E-67 T 22-04-2016 SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 Pfam PF00563 EAL domain 556 791 4.8E-70 T 22-04-2016 IPR001633 EAL domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 Gene3D G3DSA:3.20.20.450 554 802 1.6E-89 T 22-04-2016 IPR001633 EAL domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 Gene3D G3DSA:3.30.70.270 381 547 4.9E-54 T 22-04-2016 SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 SMART SM00267 368 540 9.4E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 535 1.1E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 PANTHER PTHR10799 268 650 4.3E-67 T 22-04-2016 SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 SMART SM00052 550 796 3.6E-102 T 22-04-2016 IPR001633 EAL domain SAMA_RS03045 ccf31d7e7ce8f5f3e4e9b1579e042e4f 824 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 539 4.1E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 PANTHER PTHR18901 1 215 1.9E-98 T 22-04-2016 SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 184 7.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 PANTHER PTHR18901:SF7 1 215 1.9E-98 T 22-04-2016 SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 SUPERFAMILY SSF56784 1 212 2.0E-39 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 Gene3D G3DSA:3.40.50.1000 6 184 1.7E-25 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00920 8dbd694f3c73abfc54a2032efd0e5440 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 185 1.3E-8 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS05120 7996e3b5770f798974b7c9b770be7b8f 792 SUPERFAMILY SSF141371 470 555 2.75E-10 T 22-04-2016 SAMA_RS05120 7996e3b5770f798974b7c9b770be7b8f 792 Pfam PF07238 PilZ domain 475 590 2.4E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SAMA_RS05120 7996e3b5770f798974b7c9b770be7b8f 792 Pfam PF07238 PilZ domain 144 227 7.1E-7 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SAMA_RS05120 7996e3b5770f798974b7c9b770be7b8f 792 Gene3D G3DSA:2.40.10.220 474 555 4.7E-5 T 22-04-2016 SAMA_RS05120 7996e3b5770f798974b7c9b770be7b8f 792 SUPERFAMILY SSF141371 144 199 6.67E-6 T 22-04-2016 SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 PANTHER PTHR30024:SF1 1 294 5.7E-36 T 22-04-2016 SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 Pfam PF09084 NMT1/THI5 like 43 252 5.7E-18 T 22-04-2016 IPR015168 SsuA/THI5-like SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 PANTHER PTHR30024 1 294 5.7E-36 T 22-04-2016 SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 SMART SM00062 32 263 1.9E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 SUPERFAMILY SSF53850 32 258 9.49E-34 T 22-04-2016 SAMA_RS09895 6bb19e948f2c7cb151bb21ec33725aa5 328 Gene3D G3DSA:3.40.190.10 113 202 5.5E-17 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 Gene3D G3DSA:3.30.70.20 112 167 6.3E-20 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 PANTHER PTHR11938 3 161 4.8E-83 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 PANTHER PTHR11938:SF110 3 161 4.8E-83 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 SUPERFAMILY SSF54862 3 182 1.15E-62 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 Gene3D G3DSA:3.30.70.20 3 71 9.0E-14 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 Gene3D G3DSA:3.30.70.20 72 111 3.6E-24 T 22-04-2016 SAMA_RS16550 442a7a22ec5d91503782e0f58c1c6b2b 188 Pfam PF13247 4Fe-4S dicluster domain 54 148 4.1E-20 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.0E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 1.0E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 1.0E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 Gene3D G3DSA:3.40.50.1370 3 143 2.9E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 315 4.4E-27 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PANTHER PTHR11405:SF16 3 335 1.9E-174 T 22-04-2016 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PANTHER PTHR11405 3 335 1.9E-174 T 22-04-2016 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 Gene3D G3DSA:3.40.50.1370 144 304 1.9E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 SUPERFAMILY SSF53671 1 318 1.3E-90 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 316 1.8E-95 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 7.2E-32 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 231 240 7.2E-32 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 7.2E-32 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 7.2E-32 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 298 312 7.2E-32 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS04400 2a55eb1a23eeb212f13a72b5daea0a5b 339 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.2E-42 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SMART SM00448 713 821 7.8E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 693 7.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SMART SM00304 370 422 3.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 PIRSF PIRSF036437 5 969 2.7E-229 T 22-04-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 10 968 1.7E-239 T 22-04-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Pfam PF01627 Hpt domain 882 967 3.0E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Gene3D G3DSA:1.10.287.130 457 527 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SUPERFAMILY SSF52172 711 826 2.7E-22 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Pfam PF00512 His Kinase A (phospho-acceptor) domain 465 531 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SUPERFAMILY SSF47226 858 969 6.15E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SMART SM00388 465 531 4.8E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Gene3D G3DSA:3.40.50.2300 712 823 1.1E-19 T 22-04-2016 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SMART SM00073 870 969 1.5E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SUPERFAMILY SSF55874 520 697 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 PANTHER PTHR24423:SF382 444 866 8.2E-93 T 22-04-2016 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Gene3D G3DSA:1.20.120.160 873 970 1.5E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Gene3D G3DSA:3.30.565.10 532 700 7.2E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SUPERFAMILY SSF47384 451 532 1.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 SMART SM00387 577 695 2.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Pfam PF00072 Response regulator receiver domain 715 817 2.7E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 Pfam PF00672 HAMP domain 350 413 2.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05145 df0acfef41bc990503e606db87deb250 973 PANTHER PTHR24423 444 866 8.2E-93 T 22-04-2016 SAMA_RS06345 dfb1e4c9c8f2b1341de504ae0bb9c8b5 698 Gene3D G3DSA:2.40.160.20 520 641 4.6E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS06345 dfb1e4c9c8f2b1341de504ae0bb9c8b5 698 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 58 698 1.5E-158 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB SAMA_RS06345 dfb1e4c9c8f2b1341de504ae0bb9c8b5 698 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 65 698 1.2E-187 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB SAMA_RS06345 dfb1e4c9c8f2b1341de504ae0bb9c8b5 698 SUPERFAMILY SSF56935 340 433 2.33E-8 T 22-04-2016 SAMA_RS06345 dfb1e4c9c8f2b1341de504ae0bb9c8b5 698 SUPERFAMILY SSF56935 480 696 2.33E-8 T 22-04-2016 SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 67 226 3.0E-24 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 PIRSF PIRSF005624 30 256 6.8E-87 T 22-04-2016 SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 2 24 - T 22-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 SUPERFAMILY SSF52540 36 248 3.09E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 PANTHER PTHR30134 1 246 8.8E-135 T 22-04-2016 SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 Gene3D G3DSA:3.40.50.300 66 140 1.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 PANTHER PTHR30134:SF0 1 246 8.8E-135 T 22-04-2016 SAMA_RS08735 06d5864c8e66555b7bb6733d93e3abaa 258 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 41 247 1.4E-78 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 13 224 1.8E-56 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 Pfam PF00814 Glycoprotease family 40 153 8.2E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 Gene3D G3DSA:3.30.420.40 13 140 4.8E-40 T 22-04-2016 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 PANTHER PTHR11735 13 142 3.2E-47 T 22-04-2016 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 SUPERFAMILY SSF53067 13 113 5.61E-28 T 22-04-2016 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 SUPERFAMILY SSF53067 119 222 1.55E-21 T 22-04-2016 SAMA_RS10140 57f53c59b25f08c807c2b595d0a8fab3 236 PANTHER PTHR11735:SF11 13 142 3.2E-47 T 22-04-2016 SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 Pfam PF00348 Polyprenyl synthetase 32 271 1.3E-74 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 PANTHER PTHR12001 6 323 9.0E-125 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 Gene3D G3DSA:1.10.600.10 4 322 1.4E-104 T 22-04-2016 IPR008949 Isoprenoid synthase domain SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 SUPERFAMILY SSF48576 6 322 2.88E-102 T 22-04-2016 IPR008949 Isoprenoid synthase domain SAMA_RS14785 80eab45e567e85080a4824cad4990240 323 PANTHER PTHR12001:SF47 6 323 9.0E-125 T 22-04-2016 SAMA_RS07050 9ffd7657e8ce8991ab0dcd1ed39e4c22 384 SUPERFAMILY SSF56601 27 357 9.18E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS07050 9ffd7657e8ce8991ab0dcd1ed39e4c22 384 Gene3D G3DSA:3.40.710.10 35 370 2.7E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS07050 9ffd7657e8ce8991ab0dcd1ed39e4c22 384 Pfam PF00144 Beta-lactamase 29 353 7.3E-53 T 22-04-2016 IPR001466 Beta-lactamase-related SAMA_RS07050 9ffd7657e8ce8991ab0dcd1ed39e4c22 384 PANTHER PTHR22935 21 349 8.3E-49 T 22-04-2016 SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 SMART SM00052 7 246 1.7E-19 T 22-04-2016 IPR001633 EAL domain SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 Pfam PF00563 EAL domain 24 241 7.5E-42 T 22-04-2016 IPR001633 EAL domain SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 PANTHER PTHR33121:SF15 25 258 1.0E-61 T 22-04-2016 SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 SUPERFAMILY SSF141868 25 242 2.09E-53 T 22-04-2016 IPR001633 EAL domain SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 Gene3D G3DSA:3.20.20.450 24 244 4.7E-43 T 22-04-2016 IPR001633 EAL domain SAMA_RS14290 e1695be409ff3260d91effdfa1e2f337 259 PANTHER PTHR33121 25 258 1.0E-61 T 22-04-2016 SAMA_RS06175 0fe20535f4aa7ef505bb9102403928e7 238 Pfam PF00753 Metallo-beta-lactamase superfamily 47 215 9.3E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06175 0fe20535f4aa7ef505bb9102403928e7 238 PANTHER PTHR11935 47 216 5.9E-18 T 22-04-2016 SAMA_RS06175 0fe20535f4aa7ef505bb9102403928e7 238 SUPERFAMILY SSF56281 22 234 1.25E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06175 0fe20535f4aa7ef505bb9102403928e7 238 SMART SM00849 47 215 2.6E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06175 0fe20535f4aa7ef505bb9102403928e7 238 Gene3D G3DSA:3.60.15.10 19 230 2.2E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 Gene3D G3DSA:1.10.10.10 2 86 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 Pfam PF03466 LysR substrate binding domain 87 287 3.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 Gene3D G3DSA:3.40.190.10 97 175 5.0E-13 T 22-04-2016 SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 Gene3D G3DSA:3.40.190.10 176 253 8.7E-7 T 22-04-2016 SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 PANTHER PTHR30537 2 301 1.2E-61 T 22-04-2016 SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 PANTHER PTHR30537:SF5 2 301 1.2E-61 T 22-04-2016 SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 SUPERFAMILY SSF46785 2 86 9.91E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14270 77b8ea412ea16479029852b242b2822f 304 SUPERFAMILY SSF53850 89 290 3.98E-25 T 22-04-2016 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 Pfam PF06574 FAD synthetase 13 167 2.7E-55 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 Gene3D G3DSA:2.40.30.30 180 307 4.1E-41 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 SUPERFAMILY SSF52374 15 178 4.38E-33 T 22-04-2016 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 Pfam PF01687 Riboflavin kinase 184 306 6.6E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 PANTHER PTHR22749:SF0 1 308 8.0E-139 T 22-04-2016 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 SUPERFAMILY SSF82114 174 307 4.58E-45 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 3.4E-100 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 Gene3D G3DSA:3.40.50.620 1 179 1.8E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04820 32810116306bad3abbd468be2749f693 311 PIRSF PIRSF004491 1 311 4.4E-106 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 PANTHER PTHR22749 1 308 8.0E-139 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SAMA_RS04820 32810116306bad3abbd468be2749f693 311 SMART SM00904 183 307 2.3E-61 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 2.1E-82 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PANTHER PTHR30381 1 363 2.5E-215 T 22-04-2016 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 38.435 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 PANTHER PTHR30381:SF1 1 363 2.5E-215 T 22-04-2016 SAMA_RS12095 99be7c954374e3f18a2f4e7ed91f577c 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.3E-136 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 Pfam PF00072 Response regulator receiver domain 3 110 6.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 Gene3D G3DSA:1.10.10.10 124 218 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 SUPERFAMILY SSF52172 2 119 4.98E-39 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 SUPERFAMILY SSF46894 123 218 9.07E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 PANTHER PTHR26402:SF552 1 218 7.2E-66 T 22-04-2016 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 PANTHER PTHR26402 1 218 7.2E-66 T 22-04-2016 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 Gene3D G3DSA:3.40.50.2300 2 116 2.3E-35 T 22-04-2016 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 SMART SM00448 1 110 1.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 SMART SM00862 144 218 6.3E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS00740 38f3280e90be57f88282b40f250f0b21 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 4.4E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS09375 a5b1aa1488d8803899f18e498f854a95 231 PANTHER PTHR42208:SF1 1 231 7.1E-67 T 22-04-2016 SAMA_RS09375 a5b1aa1488d8803899f18e498f854a95 231 PANTHER PTHR42208 1 231 7.1E-67 T 22-04-2016 SAMA_RS09375 a5b1aa1488d8803899f18e498f854a95 231 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 220 1.2E-54 T 22-04-2016 SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 Gene3D G3DSA:2.40.320.10 2 208 1.1E-29 T 22-04-2016 IPR023577 CYTH domain SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 PANTHER PTHR39569 2 492 2.2E-93 T 22-04-2016 SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 SUPERFAMILY SSF55154 1 214 1.29E-43 T 22-04-2016 IPR033469 CYTH-like domain SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 PANTHER PTHR39569:SF1 2 492 2.2E-93 T 22-04-2016 SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 Pfam PF01928 CYTH domain 3 197 2.5E-25 T 22-04-2016 IPR023577 CYTH domain SAMA_RS14000 00c8e2a323f1e280568718fcfb804515 492 SMART SM01118 2 203 1.8E-39 T 22-04-2016 IPR023577 CYTH domain SAMA_RS16360 16553a2926523cf30524a4f677035977 319 Gene3D G3DSA:3.30.70.270 158 319 4.3E-55 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 SUPERFAMILY SSF55073 161 318 3.77E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16360 16553a2926523cf30524a4f677035977 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 313 2.4E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16360 16553a2926523cf30524a4f677035977 319 PANTHER PTHR10799:SF750 189 317 4.0E-29 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 PANTHER PTHR10799:SF750 1 78 4.0E-29 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 Gene3D G3DSA:3.30.450.20 12 129 1.4E-12 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 Pfam PF00989 PAS fold 17 83 1.4E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 PANTHER PTHR10799 189 317 4.0E-29 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 PANTHER PTHR10799 1 78 4.0E-29 T 22-04-2016 SAMA_RS16360 16553a2926523cf30524a4f677035977 319 SUPERFAMILY SSF55785 6 101 1.03E-11 T 22-04-2016 IPR000014 PAS domain SAMA_RS16360 16553a2926523cf30524a4f677035977 319 SMART SM00267 145 317 1.9E-67 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16360 16553a2926523cf30524a4f677035977 319 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 137 1.7E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS16360 16553a2926523cf30524a4f677035977 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 316 2.0E-55 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 PANTHER PTHR11773:SF1 8 962 0.0 T 22-04-2016 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 PANTHER PTHR11773 8 962 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 Pfam PF02347 Glycine cleavage system P-protein 18 439 1.3E-175 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 Pfam PF02347 Glycine cleavage system P-protein 463 751 2.7E-13 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 18 955 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 Gene3D G3DSA:3.40.640.10 93 318 1.5E-10 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 Gene3D G3DSA:3.40.640.10 505 742 3.5E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 9 961 25.137 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 SUPERFAMILY SSF53383 463 890 2.61E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 SUPERFAMILY SSF53383 934 956 2.61E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS14230 8414ee3d06b7f2c687dcf3e7ea81b274 962 SUPERFAMILY SSF53383 18 441 3.89E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 Pfam PF00467 KOW motif 132 162 1.2E-9 T 22-04-2016 IPR005824 KOW SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 Pfam PF02357 Transcription termination factor nusG 9 114 3.5E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 PANTHER PTHR30265 1 182 3.4E-83 T 22-04-2016 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 11 182 5.3E-69 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 SMART SM00739 129 156 7.5E-6 T 22-04-2016 IPR005824 KOW SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 8 183 25.176 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 SMART SM00738 8 117 2.5E-49 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 SUPERFAMILY SSF50104 128 182 1.1E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 Gene3D G3DSA:3.30.70.940 8 119 1.3E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 SUPERFAMILY SSF82679 8 119 1.96E-39 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 PRINTS PR00338 Transcription termination factor NUSG signature 63 75 4.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 PRINTS PR00338 Transcription termination factor NUSG signature 141 156 4.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 4.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SAMA_RS01065 f4de9cdb016e5b0df8defb62c8e20005 183 Gene3D G3DSA:2.30.30.30 122 182 2.7E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 PANTHER PTHR30522 5 274 2.5E-126 T 22-04-2016 SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 TIGRFAM TIGR00444 mazG: MazG family protein 21 268 3.7E-102 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 SUPERFAMILY SSF101386 146 243 3.93E-25 T 22-04-2016 SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 PANTHER PTHR30522:SF0 5 274 2.5E-126 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 178 237 3.9E-8 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 5.1E-26 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 Gene3D G3DSA:1.10.287.1080 30 82 5.7E-6 T 22-04-2016 SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 Gene3D G3DSA:1.10.287.1080 143 232 1.4E-13 T 22-04-2016 SAMA_RS05390 03d6955b78800517e4e84a5002af35f4 275 SUPERFAMILY SSF101386 13 115 3.11E-24 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 Pfam PF00571 CBS domain 202 258 0.0066 T 22-04-2016 IPR000644 CBS domain SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 Pfam PF00571 CBS domain 270 322 3.8E-7 T 22-04-2016 IPR000644 CBS domain SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 SMART SM00116 276 324 2.5 T 22-04-2016 IPR000644 CBS domain SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 SMART SM00116 211 259 5.9 T 22-04-2016 IPR000644 CBS domain SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 PIRSF PIRSF004692 1 325 9.9E-129 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 315 3.4E-108 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 SUPERFAMILY SSF53697 13 320 1.22E-67 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 PANTHER PTHR38418 14 319 2.5E-40 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 PANTHER PTHR38418:SF1 14 319 2.5E-40 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 Gene3D G3DSA:3.10.580.10 193 322 7.8E-37 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 Gene3D G3DSA:3.40.50.10490 13 192 6.8E-53 T 22-04-2016 SAMA_RS16085 e9ec769bc697fac9c90a93dfd96a7793 325 Pfam PF01380 SIS domain 42 173 2.9E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 Gene3D G3DSA:3.40.1190.20 1 321 1.9E-84 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 SUPERFAMILY SSF53613 1 315 1.15E-78 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 PANTHER PTHR10584:SF161 1 320 4.0E-91 T 22-04-2016 SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 Pfam PF00294 pfkB family carbohydrate kinase 1 306 2.4E-58 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS01570 f8ab47449f941d0f23f35c2152233eef 337 PANTHER PTHR10584 1 320 4.0E-91 T 22-04-2016 SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 PANTHER PTHR11959 1 345 5.9E-117 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 Gene3D G3DSA:3.10.180.10 4 143 3.5E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 300 5.0E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 SUPERFAMILY SSF54593 5 332 8.96E-70 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 PANTHER PTHR11959:SF1 1 345 5.9E-117 T 22-04-2016 SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 138 5.5E-43 T 22-04-2016 SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 Gene3D G3DSA:3.10.180.10 151 345 2.6E-65 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 345 4.0E-120 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SAMA_RS08175 9c8f397a144d1585ee91f29fec1d9b0b 345 PIRSF PIRSF009283 1 345 5.7E-109 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PIRSF PIRSF001336 1 636 1.0E-257 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 2.5E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 2.5E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 2.5E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 2.5E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 635 42.232 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 6.4E-66 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Gene3D G3DSA:2.40.37.10 458 590 2.3E-14 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Gene3D G3DSA:2.40.37.10 333 359 2.3E-14 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PANTHER PTHR11482 1 369 7.1E-261 T 22-04-2016 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PANTHER PTHR11482 442 600 7.1E-261 T 22-04-2016 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Gene3D G3DSA:3.20.20.10 69 332 2.2E-59 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 634 3.7E-262 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PANTHER PTHR11482:SF36 1 369 7.1E-261 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 PANTHER PTHR11482:SF36 442 600 7.1E-261 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 439 563 1.5E-21 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 89 347 2.3E-53 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SAMA_RS10260 30b6ff81bef564a9a549705675b80696 636 SUPERFAMILY SSF51419 66 348 2.8E-66 T 22-04-2016 IPR029066 PLP-binding barrel SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 SMART SM00965 298 346 2.1E-10 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 Pfam PF03958 Bacterial type II/III secretion system short domain 374 436 3.8E-13 T 22-04-2016 IPR005644 NolW-like SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 627 660 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PANTHER PTHR30604 148 683 8.0E-129 T 22-04-2016 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 669 683 4.1E-21 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 646 664 4.1E-21 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 436 446 4.1E-21 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 519 543 4.1E-21 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 554 564 4.1E-21 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 273 681 6.3E-156 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 Pfam PF00263 Bacterial type II and III secretion system protein 523 681 1.9E-47 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR01032 Gene IV protein signature 503 526 5.1E-5 T 22-04-2016 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR01032 Gene IV protein signature 662 684 5.1E-5 T 22-04-2016 SAMA_RS17535 30c758ff4293d8d05e4e1fb61a98613d 685 PRINTS PR01032 Gene IV protein signature 609 637 5.1E-5 T 22-04-2016 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 Gene3D G3DSA:3.30.1330.10 2 140 1.7E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 SUPERFAMILY SSF56042 142 306 2.24E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 316 31.858 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 137 7.9E-25 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 303 1.0E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 SUPERFAMILY SSF55326 3 137 7.15E-36 T 22-04-2016 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 PIRSF PIRSF005303 1 319 5.0E-93 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 Gene3D G3DSA:3.90.650.10 145 319 1.4E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 PANTHER PTHR30270:SF0 2 319 2.5E-136 T 22-04-2016 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 PANTHER PTHR30270 2 319 2.5E-136 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SAMA_RS05325 e653fe2cc323782b47642c1539723f09 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 319 3.6E-108 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SAMA_RS02295 f816d754419db310202a758d2527c527 232 Pfam PF00175 Oxidoreductase NAD-binding domain 107 210 1.7E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 125 1.3E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 90 99 1.3E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 140 1.3E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.3E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.3E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 SUPERFAMILY SSF52343 99 229 4.98E-33 T 22-04-2016 SAMA_RS02295 f816d754419db310202a758d2527c527 232 Gene3D G3DSA:2.40.30.10 4 97 3.3E-26 T 22-04-2016 SAMA_RS02295 f816d754419db310202a758d2527c527 232 SUPERFAMILY SSF63380 4 96 6.27E-18 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PANTHER PTHR19370:SF119 4 231 5.1E-128 T 22-04-2016 SAMA_RS02295 f816d754419db310202a758d2527c527 232 PANTHER PTHR19370 4 231 5.1E-128 T 22-04-2016 SAMA_RS02295 f816d754419db310202a758d2527c527 232 Gene3D G3DSA:3.40.50.80 99 229 2.0E-34 T 22-04-2016 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 PANTHER PTHR24221:SF261 1 589 1.1E-281 T 22-04-2016 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 Pfam PF00664 ABC transporter transmembrane region 24 292 6.7E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 PANTHER PTHR24221 1 589 1.1E-281 T 22-04-2016 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 Gene3D G3DSA:3.40.50.300 347 571 9.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 SUPERFAMILY SSF52540 341 577 4.88E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 24 552 6.8E-176 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 Pfam PF00005 ABC transporter 366 508 4.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 Gene3D G3DSA:1.20.1560.10 22 329 1.9E-46 T 22-04-2016 SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 SMART SM00382 372 556 1.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14035 b0d1f4daf3b7331efaff5fa226510fa4 597 SUPERFAMILY SSF90123 20 331 5.23E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 Gene3D G3DSA:1.10.1660.10 60 133 4.5E-28 T 22-04-2016 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 SMART SM00422 5 74 6.9E-30 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 Gene3D G3DSA:1.10.1660.10 2 59 2.0E-27 T 22-04-2016 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 PANTHER PTHR30204 1 131 1.5E-50 T 22-04-2016 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.5E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.5E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.5E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 Pfam PF13411 MerR HTH family regulatory protein 6 71 1.9E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 PANTHER PTHR30204:SF16 1 131 1.5E-50 T 22-04-2016 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 6 130 1.9E-47 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 SAMA_RS09305 3531a3422d3de956d84dd928d9bbcd02 134 SUPERFAMILY SSF46955 5 130 1.25E-36 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 PANTHER PTHR35089 1 163 2.8E-48 T 22-04-2016 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 SUPERFAMILY SSF111384 20 161 9.55E-34 T 22-04-2016 IPR024930 Skp domain SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 SMART SM00935 8 162 5.7E-49 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 Pfam PF03938 Outer membrane protein (OmpH-like) 9 161 2.2E-29 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 PANTHER PTHR35089:SF1 1 163 2.8E-48 T 22-04-2016 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 Gene3D G3DSA:3.30.910.20 9 56 5.6E-32 T 22-04-2016 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 Gene3D G3DSA:3.30.910.20 94 161 5.6E-32 T 22-04-2016 SAMA_RS06015 04f296b937c031d9738ede67d3e58a73 165 PIRSF PIRSF002094 1 165 4.7E-48 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 PANTHER PTHR33449 1 109 1.2E-51 T 22-04-2016 SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 Gene3D G3DSA:3.30.1310.10 1 109 1.1E-49 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 SUPERFAMILY SSF82607 11 103 1.12E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 PIRSF PIRSF004555 3 109 8.5E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 PANTHER PTHR33449:SF1 1 109 1.2E-51 T 22-04-2016 SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 3.6E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS06850 4a48bf0eb59d302bd07f53efaf35da6f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 22.813 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 296 315 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 22 45 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 94 114 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 159 179 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 351 370 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 235 254 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 330 348 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 196 218 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PRINTS PR00166 Aromatic amino acid permease signature 49 68 1.6E-94 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PANTHER PTHR32195 3 414 1.2E-185 T 22-04-2016 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 PANTHER PTHR32195:SF18 3 414 1.2E-185 T 22-04-2016 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 19 399 1.7E-137 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 SAMA_RS18095 8341e9483edd95c77946ff87215727c5 418 Pfam PF03222 Tryptophan/tyrosine permease family 13 406 1.8E-135 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PANTHER PTHR32063 1 1006 3.4E-213 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Gene3D G3DSA:3.30.2090.10 187 269 1.4E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Gene3D G3DSA:3.30.2090.10 699 786 4.9E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82693 40 129 3.66E-17 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82714 700 784 1.96E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82866 292 495 8.5E-38 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Gene3D G3DSA:3.30.70.1430 40 129 8.9E-18 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Gene3D G3DSA:1.10.3850.10 276 495 2.3E-50 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Gene3D G3DSA:1.10.3850.10 790 1010 1.8E-51 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PANTHER PTHR32063:SF0 1 1006 3.4E-213 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82693 144 186 3.49E-10 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82693 270 328 3.49E-10 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82866 781 1012 3.01E-39 T 22-04-2016 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 SUPERFAMILY SSF82714 188 266 4.45E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.9E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS00710 e1a7230d70aeac7f835590c6bd0f81e3 1026 Pfam PF00873 AcrB/AcrD/AcrF family 8 1009 9.4E-172 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS11335 6d71ed4e1e837b3b7f5d083fc52470e9 318 PANTHER PTHR33608:SF6 15 317 6.1E-115 T 22-04-2016 SAMA_RS11335 6d71ed4e1e837b3b7f5d083fc52470e9 318 Pfam PF01882 Protein of unknown function DUF58 62 146 2.4E-21 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SAMA_RS11335 6d71ed4e1e837b3b7f5d083fc52470e9 318 PANTHER PTHR33608 15 317 6.1E-115 T 22-04-2016 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 Pfam PF01514 Secretory protein of YscJ/FliF family 39 225 3.1E-53 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 27 559 1.8E-79 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PRINTS PR01009 Flagellar M-ring protein signature 201 219 7.9E-23 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PRINTS PR01009 Flagellar M-ring protein signature 350 374 7.9E-23 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PRINTS PR01009 Flagellar M-ring protein signature 127 145 7.9E-23 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PRINTS PR01009 Flagellar M-ring protein signature 159 173 7.9E-23 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PRINTS PR01009 Flagellar M-ring protein signature 271 289 7.9E-23 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 Pfam PF08345 Flagellar M-ring protein C-terminal 258 427 1.1E-45 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PANTHER PTHR30046 8 561 1.8E-181 T 22-04-2016 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PANTHER PTHR30046:SF0 8 561 1.8E-181 T 22-04-2016 SAMA_RS12025 2fa4f2b454e1bd15310f7be93116d488 561 PIRSF PIRSF004862 8 561 2.9E-124 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.3E-193 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 135 3.4E-46 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 SUPERFAMILY SSF53738 156 256 3.92E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.659 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Gene3D G3DSA:3.40.120.10 176 250 7.7E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 PANTHER PTHR22573 1 443 1.0E-174 T 22-04-2016 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.6E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 PANTHER PTHR22573:SF15 1 443 1.0E-174 T 22-04-2016 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Gene3D G3DSA:3.40.120.10 252 367 6.0E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 6.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Gene3D G3DSA:3.40.120.10 4 153 6.5E-50 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 SUPERFAMILY SSF53738 3 181 6.67E-50 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 SUPERFAMILY SSF53738 258 365 7.85E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 365 2.1E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 Gene3D G3DSA:3.30.310.50 369 443 3.9E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS04995 a7b7f1ca3ead4fc7751f7c991ecd4647 445 SUPERFAMILY SSF55957 358 444 8.24E-23 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 SMART SM00486 166 577 6.6E-55 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 511 523 2.4E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 563 571 2.4E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 438 451 2.4E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 Pfam PF03104 DNA polymerase family B, exonuclease domain 187 319 7.1E-10 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 Gene3D G3DSA:3.30.420.10 167 389 1.2E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 PANTHER PTHR10322 217 786 3.1E-133 T 22-04-2016 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 SUPERFAMILY SSF53098 23 412 1.08E-74 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 Gene3D G3DSA:3.90.1600.10 424 454 4.3E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 Gene3D G3DSA:3.90.1600.10 534 656 4.3E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 ProSitePatterns PS00116 DNA polymerase family B signature. 565 573 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 SUPERFAMILY SSF56672 408 792 8.34E-104 T 22-04-2016 SAMA_RS06550 afbcc57d48f562fc883519f9a2e66ddd 801 Pfam PF00136 DNA polymerase family B 401 755 4.7E-40 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Gene3D G3DSA:3.40.50.970 4 320 1.5E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Pfam PF02780 Transketolase, C-terminal domain 539 654 1.6E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 332 4.2E-167 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 PANTHER PTHR11624 327 662 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 PANTHER PTHR11624 1 308 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 4.8E-45 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Gene3D G3DSA:3.40.50.970 326 532 7.6E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 PANTHER PTHR11624:SF1 327 662 0.0 T 22-04-2016 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 PANTHER PTHR11624:SF1 1 308 0.0 T 22-04-2016 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 SUPERFAMILY SSF52518 4 327 1.97E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 Gene3D G3DSA:3.40.50.920 537 662 3.5E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 SMART SM00861 353 524 7.8E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 SUPERFAMILY SSF52922 532 663 9.29E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS14430 c34935cacf30f85444c902518bc1bfdf 663 SUPERFAMILY SSF52518 344 526 1.21E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 SUPERFAMILY SSF54534 82 158 3.53E-24 T 22-04-2016 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Gene3D G3DSA:3.10.50.30 78 158 1.8E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 8.3E-22 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 PIRSF PIRSF006092 1 159 9.5E-49 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 SUPERFAMILY SSF46557 6 80 9.16E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 156 28.047 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 PANTHER PTHR30437 1 165 5.9E-97 T 22-04-2016 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Gene3D G3DSA:1.10.287.180 4 77 1.6E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.0E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 3 158 51.378 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 PANTHER PTHR30437:SF6 1 165 5.9E-97 T 22-04-2016 SAMA_RS18245 4cf7eb89c7301b1fe9605c6c88156adf 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 5 158 6.3E-73 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Gene3D G3DSA:3.30.450.40 20 139 3.4E-12 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 PANTHER PTHR33121:SF13 266 622 8.6E-84 T 22-04-2016 SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 357 9.7E-23 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Pfam PF01590 GAF domain 20 139 1.4E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 SUPERFAMILY SSF55781 20 159 3.43E-20 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Gene3D G3DSA:3.20.20.450 376 622 9.5E-91 T 22-04-2016 IPR001633 EAL domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 SUPERFAMILY SSF141868 377 623 7.19E-84 T 22-04-2016 IPR001633 EAL domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 PANTHER PTHR33121 266 622 8.6E-84 T 22-04-2016 SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 SMART SM00267 192 363 8.6E-28 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Pfam PF00563 EAL domain 379 613 3.0E-72 T 22-04-2016 IPR001633 EAL domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Gene3D G3DSA:3.30.70.270 205 369 1.4E-35 T 22-04-2016 SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 SUPERFAMILY SSF55073 208 356 1.02E-30 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 SMART SM00052 372 619 1.8E-112 T 22-04-2016 IPR001633 EAL domain SAMA_RS16160 c9f1c4ab669ac8d7a7966e56a601a265 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 356 2.7E-31 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 PANTHER PTHR30154:SF0 4 166 5.3E-102 T 22-04-2016 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 9.7E-20 T 22-04-2016 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 SMART SM00344 12 121 4.5E-52 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 SUPERFAMILY SSF46785 12 71 1.29E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 Gene3D G3DSA:3.30.70.920 65 160 1.7E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.0E-22 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.0E-22 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.0E-22 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 8.5E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 SUPERFAMILY SSF54909 74 157 2.28E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 Gene3D G3DSA:1.10.10.10 13 64 7.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 PANTHER PTHR30154 4 166 5.3E-102 T 22-04-2016 SAMA_RS09240 6c3493100a5b00a28355f04a70f16807 167 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SAMA_RS02185 21f49f04e15db38d5973f527b2cf2185 151 PANTHER PTHR23091:SF275 8 146 4.0E-42 T 22-04-2016 SAMA_RS02185 21f49f04e15db38d5973f527b2cf2185 151 SUPERFAMILY SSF55729 3 148 1.28E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS02185 21f49f04e15db38d5973f527b2cf2185 151 Gene3D G3DSA:3.40.630.30 3 146 9.0E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS02185 21f49f04e15db38d5973f527b2cf2185 151 PANTHER PTHR23091 8 146 4.0E-42 T 22-04-2016 SAMA_RS02185 21f49f04e15db38d5973f527b2cf2185 151 Pfam PF13673 Acetyltransferase (GNAT) domain 45 146 1.1E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 Pfam PF00293 NUDIX domain 47 170 7.1E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 PANTHER PTHR11839 4 183 7.2E-94 T 22-04-2016 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 SUPERFAMILY SSF55811 8 180 3.25E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 PANTHER PTHR11839:SF12 4 183 7.2E-94 T 22-04-2016 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SAMA_RS00925 5e4a03beed667d49adf8229d1abc0e1c 183 Gene3D G3DSA:3.90.79.10 9 180 1.7E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 280 43.294 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 PANTHER PTHR18895 22 285 1.2E-105 T 22-04-2016 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 276 5.4E-89 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 SUPERFAMILY SSF53335 6 278 1.31E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 Pfam PF13847 Methyltransferase domain 114 245 2.2E-19 T 22-04-2016 IPR025714 Methyltransferase domain SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 281 5.1E-83 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 Gene3D G3DSA:1.10.8.10 6 89 1.6E-30 T 22-04-2016 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 Gene3D G3DSA:3.40.50.150 91 279 2.0E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS13375 1b6a1d41af52634b8c1a820adc7c5170 285 PANTHER PTHR18895:SF64 22 285 1.2E-105 T 22-04-2016 SAMA_RS07865 aeaafafb4fa24c66cfa14205c07df094 788 SUPERFAMILY SSF49344 41 234 6.67E-37 T 22-04-2016 SAMA_RS07865 aeaafafb4fa24c66cfa14205c07df094 788 Gene3D G3DSA:2.60.40.1190 44 225 6.0E-29 T 22-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 SAMA_RS07865 aeaafafb4fa24c66cfa14205c07df094 788 Pfam PF06452 Carbohydrate family 9 binding domain-like 50 216 8.8E-10 T 22-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PANTHER PTHR10836 1 331 2.4E-221 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 SMART SM00846 4 153 3.0E-67 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.4E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.4E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.4E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.4E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.4E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PANTHER PTHR10836:SF37 1 331 2.4E-221 T 22-04-2016 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 PIRSF PIRSF000149 2 335 1.5E-114 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 Gene3D G3DSA:3.40.50.720 3 161 4.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 153 4.4E-47 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 Gene3D G3DSA:3.30.360.10 162 316 3.3E-68 T 22-04-2016 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 SUPERFAMILY SSF51735 3 181 1.35E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 SUPERFAMILY SSF55347 153 315 7.48E-65 T 22-04-2016 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 325 3.8E-117 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS02650 c7374ff6199b3ab093842ca9635bb5fb 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 4.7E-60 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Pfam PF00694 Aconitase C-terminal domain 656 787 1.6E-29 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Gene3D G3DSA:3.30.499.10 361 545 1.0E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Gene3D G3DSA:3.20.19.10 604 857 4.5E-64 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 191 204 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 162 170 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 138 151 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 267 280 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 205 220 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 464 477 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 360 374 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 281 294 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PRINTS PR00415 Aconitase family signature 402 413 2.5E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PANTHER PTHR11670:SF43 720 861 0.0 T 22-04-2016 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PANTHER PTHR11670:SF43 8 676 0.0 T 22-04-2016 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 22-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 SUPERFAMILY SSF53732 23 587 3.66E-184 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 SUPERFAMILY SSF52016 598 857 3.34E-67 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Gene3D G3DSA:3.30.499.10 26 226 2.2E-59 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PANTHER PTHR11670 720 861 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 PANTHER PTHR11670 8 676 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 1.3E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS17175 ed6a9bf302008d2d6deb28da7abf74d9 861 Gene3D G3DSA:3.40.1060.10 227 360 5.6E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 SMART SM00342 253 336 1.1E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 SUPERFAMILY SSF46689 236 287 5.82E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 Gene3D G3DSA:1.10.10.60 290 340 1.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 Gene3D G3DSA:1.10.10.60 243 289 1.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 Pfam PF01965 DJ-1/PfpI family 100 198 1.0E-9 T 22-04-2016 IPR002818 DJ-1/PfpI SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 Pfam PF12833 Helix-turn-helix domain 259 337 2.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 SUPERFAMILY SSF46689 289 340 7.17E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 PANTHER PTHR11019 67 344 2.6E-48 T 22-04-2016 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 PANTHER PTHR11019:SF68 67 344 2.6E-48 T 22-04-2016 SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 SUPERFAMILY SSF52317 16 218 2.29E-30 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS18665 4ce6d1287a35800079cd9921f717a835 348 Gene3D G3DSA:3.40.50.880 17 242 1.5E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 SMART SM00421 143 200 8.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 Gene3D G3DSA:1.10.10.10 106 197 1.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 198 4.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03685 4893e2f78883dd97b5505afbd25f16a6 200 SUPERFAMILY SSF46894 142 198 5.78E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Gene3D G3DSA:1.25.40.20 605 778 2.5E-38 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SUPERFAMILY SSF48403 395 559 4.46E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SUPERFAMILY SSF48403 254 336 4.46E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Pfam PF12796 Ankyrin repeats (3 copies) 671 763 1.9E-10 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Pfam PF12796 Ankyrin repeats (3 copies) 492 560 1.1E-10 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SUPERFAMILY SSF48403 114 229 1.19E-8 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 PANTHER PTHR24198 596 781 7.0E-52 T 22-04-2016 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 PANTHER PTHR24198 495 559 7.0E-52 T 22-04-2016 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 PANTHER PTHR24198 79 170 7.0E-52 T 22-04-2016 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 PANTHER PTHR24198 35 47 7.0E-52 T 22-04-2016 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Gene3D G3DSA:1.25.40.20 493 561 6.0E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SUPERFAMILY SSF48403 496 774 3.15E-38 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Pfam PF13637 Ankyrin repeats (many copies) 604 655 3.2E-8 T 22-04-2016 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Gene3D G3DSA:1.25.40.20 154 219 1.9E-5 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 736 765 83.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 402 431 820.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 140 170 4.3 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 498 527 4.9 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 666 695 3.1 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 600 630 0.29 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 634 663 0.27 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 531 560 4.4E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 SMART SM00248 700 732 0.66 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Gene3D G3DSA:1.25.40.20 397 442 1.2E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS03625 d30543571efcf054de00ec31c77b3421 902 Gene3D G3DSA:1.25.40.20 117 153 1.2E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 SUPERFAMILY SSF56037 400 478 1.23E-18 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 430 462 6.5E-9 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 Pfam PF11734 TilS substrate C-terminal domain 420 485 3.4E-21 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 PANTHER PTHR11807 28 493 9.5E-67 T 22-04-2016 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 SUPERFAMILY SSF82829 262 332 1.07E-16 T 22-04-2016 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 Pfam PF01171 PP-loop family 30 209 2.9E-46 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 SUPERFAMILY SSF52402 27 241 1.21E-50 T 22-04-2016 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 18 322 20.588 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 SMART SM00977 416 489 8.9E-19 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 29 213 5.3E-47 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 Pfam PF09179 TilS substrate binding domain 263 330 1.1E-12 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 Gene3D G3DSA:3.40.50.620 18 189 8.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06050 aebc1285d857fe1d7cb45f28dff8a014 497 PANTHER PTHR11807:SF2 28 493 9.5E-67 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SAMA_RS12710 8e635963d86d725ef5c966a0fc4664b8 255 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SAMA_RS12710 8e635963d86d725ef5c966a0fc4664b8 255 PANTHER PTHR30433 2 255 1.1E-125 T 22-04-2016 SAMA_RS12710 8e635963d86d725ef5c966a0fc4664b8 255 PANTHER PTHR30433:SF2 2 255 1.1E-125 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SAMA_RS12710 8e635963d86d725ef5c966a0fc4664b8 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 214 2.8E-24 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SAMA_RS03480 120de35c9aa9670a370135d39d8ff8fa 285 Gene3D G3DSA:3.40.50.1820 25 265 1.8E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03480 120de35c9aa9670a370135d39d8ff8fa 285 SUPERFAMILY SSF53474 27 219 1.65E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 SUPERFAMILY SSF54752 271 327 3.79E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 Hamap MF_00268 Protein RecA [recA]. 7 331 50.506 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 Gene3D G3DSA:3.30.250.10 270 328 1.4E-27 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PANTHER PTHR22942 1 337 9.2E-205 T 22-04-2016 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 6.6E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 Gene3D G3DSA:3.40.50.300 29 269 6.7E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 SMART SM00382 59 230 6.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PANTHER PTHR22942:SF1 1 337 9.2E-205 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 SUPERFAMILY SSF52540 6 269 6.99E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 Pfam PF00154 recA bacterial DNA recombination protein 9 270 7.4E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 212 240 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 95 124 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 167 196 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 245 274 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 299 316 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS05450 4ebf2acae7ba67b07bc50a00a89088ff 355 PRINTS PR00142 RecA protein signature 129 158 1.3E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 SUPERFAMILY SSF55811 2 199 6.77E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 PANTHER PTHR11839 6 202 2.9E-98 T 22-04-2016 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 Gene3D G3DSA:3.90.79.10 10 197 8.2E-58 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 194 5.7E-62 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 ProSitePatterns PS00893 Nudix box signature. 92 113 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 Pfam PF00293 NUDIX domain 52 171 2.9E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS15910 47ca930deb34174157993633197b0d78 204 PANTHER PTHR11839:SF5 6 202 2.9E-98 T 22-04-2016 SAMA_RS15625 234271e2eb1b253a82e05a1e864a1495 65 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 53 1.6E-24 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 SAMA_RS15625 234271e2eb1b253a82e05a1e864a1495 65 Gene3D G3DSA:2.20.25.10 6 53 1.2E-5 T 22-04-2016 SAMA_RS15625 234271e2eb1b253a82e05a1e864a1495 65 SUPERFAMILY SSF57783 8 52 3.03E-6 T 22-04-2016 SAMA_RS15625 234271e2eb1b253a82e05a1e864a1495 65 Pfam PF09526 Probable metal-binding protein (DUF2387) 5 52 1.8E-17 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 278 1.4E-120 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 SUPERFAMILY SSF48150 12 229 8.01E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 PANTHER PTHR10359 17 348 1.3E-104 T 22-04-2016 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 Pfam PF14815 NUDIX domain 238 349 6.6E-20 T 22-04-2016 IPR029119 MutY, C-terminal SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 172 1.2E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 SMART SM00525 195 215 0.0051 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 SMART SM00478 43 194 4.7E-50 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 Gene3D G3DSA:1.10.1670.10 127 228 3.2E-39 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 ProSitePatterns PS01155 Endonuclease III family signature. 106 135 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 Gene3D G3DSA:1.10.340.30 26 126 1.4E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 SUPERFAMILY SSF55811 224 351 7.1E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS12995 1b03b331d111c4a274986140944f1389 368 Gene3D G3DSA:3.90.79.10 237 356 4.1E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Pfam PF05922 Peptidase inhibitor I9 86 193 3.8E-5 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PRINTS PR00723 Subtilisin serine protease family (S8) signature 220 239 1.8E-16 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PRINTS PR00723 Subtilisin serine protease family (S8) signature 685 701 1.8E-16 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PRINTS PR00723 Subtilisin serine protease family (S8) signature 303 316 1.8E-16 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 307 317 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Pfam PF02225 PA domain 494 590 7.1E-6 T 22-04-2016 IPR003137 PA domain SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 225 236 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1678 1699 0.0032 T 22-04-2016 IPR020008 GlyGly-CTERM domain SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795:SF419 152 480 6.9E-148 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795:SF419 1653 1671 6.9E-148 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795:SF419 82 126 6.9E-148 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795:SF419 530 868 6.9E-148 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Gene3D G3DSA:3.40.50.200 280 459 1.3E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Gene3D G3DSA:3.40.50.200 632 759 1.3E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Gene3D G3DSA:3.40.50.200 168 241 1.3E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Pfam PF00082 Subtilase family 220 723 4.0E-42 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795 152 480 6.9E-148 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795 1653 1671 6.9E-148 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795 82 126 6.9E-148 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PANTHER PTHR10795 530 868 6.9E-148 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 PIRSF PIRSF037895 1 1700 0.0 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 SUPERFAMILY SSF52743 196 259 5.24E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 SUPERFAMILY SSF52743 300 463 5.24E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 SUPERFAMILY SSF52743 636 758 5.24E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 Gene3D G3DSA:3.50.30.30 488 589 1.7E-5 T 22-04-2016 SAMA_RS03370 874953f3f49aeaa9d316d0a9e629dd16 1702 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 686 696 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Gene3D G3DSA:3.30.70.1170 168 224 5.0E-19 T 22-04-2016 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PANTHER PTHR22807 34 424 3.7E-123 T 22-04-2016 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 SUPERFAMILY SSF48013 1 144 4.32E-34 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Gene3D G3DSA:3.40.50.150 228 424 6.3E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 2.8E-142 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 SUPERFAMILY SSF53335 135 424 1.51E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 309 320 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Gene3D G3DSA:1.10.940.10 1 143 1.2E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 360 376 1.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 216 230 1.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 245 255 1.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 310 322 1.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 234 423 8.4E-68 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Pfam PF01029 NusB family 1 124 9.1E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 PANTHER PTHR22807:SF30 34 424 3.7E-123 T 22-04-2016 SAMA_RS00195 b8abdc7fcc4555244b0a5a5383fa8a03 427 Gene3D G3DSA:1.10.287.730 144 167 1.2E-12 T 22-04-2016 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 SMART SM00862 152 228 1.1E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 1.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 Gene3D G3DSA:3.40.50.2300 6 127 3.6E-29 T 22-04-2016 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 PANTHER PTHR26402:SF292 7 228 8.3E-60 T 22-04-2016 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 Gene3D G3DSA:1.10.10.10 129 229 8.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 Pfam PF00072 Response regulator receiver domain 10 117 9.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 PANTHER PTHR26402 7 228 8.3E-60 T 22-04-2016 SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 SUPERFAMILY SSF52172 7 186 3.92E-32 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03355 840636edee6cbcc0df3b1e474d2ced26 235 SMART SM00448 7 117 1.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 Gene3D G3DSA:3.40.1160.10 3 240 3.7E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 PIRSF PIRSF005650 4 241 1.8E-87 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 Pfam PF00696 Amino acid kinase family 11 219 3.4E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 SUPERFAMILY SSF53633 8 239 1.83E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.588 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 PANTHER PTHR21499 2 239 5.7E-110 T 22-04-2016 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 PANTHER PTHR21499:SF23 2 239 5.7E-110 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SAMA_RS05980 e9f9c477eab9fee400537c188bbb7dc6 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 2.3E-101 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 PANTHER PTHR11938 1 183 1.3E-88 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 3.0E-85 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.7E-17 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 PIRSF PIRSF005784 3 188 5.8E-86 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 SUPERFAMILY SSF54862 38 173 1.3E-30 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 Gene3D G3DSA:3.30.70.20 47 118 5.3E-8 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 Pfam PF04060 Putative Fe-S cluster 44 75 3.2E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 PANTHER PTHR11938:SF64 1 183 1.3E-88 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 Gene3D G3DSA:3.30.70.20 119 173 2.4E-16 T 22-04-2016 SAMA_RS09590 1eeefaaed2ea714b094026648367e00f 189 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.548 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 SMART SM00866 89 226 2.4E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 SUPERFAMILY SSF64288 56 231 2.36E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.2E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.2E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 Gene3D G3DSA:3.40.1410.10 86 222 7.7E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 PANTHER PTHR11751:SF364 2 92 2.1E-33 T 22-04-2016 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 Gene3D G3DSA:1.10.10.10 5 75 3.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 Pfam PF07702 UTRA domain 90 226 1.5E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 232 2.3E-94 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 PANTHER PTHR11751 2 92 2.1E-33 T 22-04-2016 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 SUPERFAMILY SSF46785 5 72 1.42E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 1.9E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS00410 9dd83fd357ecef9350e1a93ae0725c61 234 SMART SM00345 9 68 5.1E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 SUPERFAMILY SSF46894 118 221 5.39E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 SMART SM00862 145 220 5.2E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 Gene3D G3DSA:3.40.50.2300 1 120 1.8E-34 T 22-04-2016 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 PANTHER PTHR26402:SF316 1 220 1.9E-95 T 22-04-2016 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 PANTHER PTHR26402 1 220 1.9E-95 T 22-04-2016 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 SUPERFAMILY SSF52172 1 118 4.41E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 Gene3D G3DSA:1.10.10.10 122 221 4.2E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 9.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS17210 e3c770324d7b8e7022f0994dddbe41c6 224 SMART SM00448 1 112 8.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS00540 9241155213478c1215757e023541f6b5 527 SUPERFAMILY SSF56112 230 441 1.69E-11 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS00540 9241155213478c1215757e023541f6b5 527 Gene3D G3DSA:3.90.1200.10 341 430 5.4E-4 T 22-04-2016 SAMA_RS00540 9241155213478c1215757e023541f6b5 527 SUPERFAMILY SSF53448 18 222 3.45E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS01055 eadea286965748103a02c3f359263037 394 SUPERFAMILY SSF50447 205 301 1.49E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS01055 eadea286965748103a02c3f359263037 394 SUPERFAMILY SSF50465 298 393 6.91E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SAMA_RS01055 eadea286965748103a02c3f359263037 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.4E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SAMA_RS01055 eadea286965748103a02c3f359263037 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.3E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PANTHER PTHR23115 1 392 2.0E-294 T 22-04-2016 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Gene3D G3DSA:3.40.50.300 5 211 7.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01055 eadea286965748103a02c3f359263037 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SAMA_RS01055 eadea286965748103a02c3f359263037 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 4.6E-234 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS01055 eadea286965748103a02c3f359263037 394 SUPERFAMILY SSF52540 6 219 1.68E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01055 eadea286965748103a02c3f359263037 394 PANTHER PTHR23115:SF151 1 392 2.0E-294 T 22-04-2016 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Gene3D G3DSA:2.40.30.10 212 298 1.6E-36 T 22-04-2016 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-60 T 22-04-2016 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Gene3D G3DSA:2.40.30.10 300 392 8.8E-47 T 22-04-2016 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.5E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SAMA_RS01055 eadea286965748103a02c3f359263037 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.263 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 Gene3D G3DSA:1.10.10.10 140 210 2.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 SUPERFAMILY SSF52172 1 147 1.99E-26 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.9E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.9E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.9E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 Pfam PF00072 Response regulator receiver domain 6 118 2.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 SMART SM00421 151 208 4.1E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 SUPERFAMILY SSF46894 141 210 1.22E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 PANTHER PTHR26402:SF474 4 204 2.0E-62 T 22-04-2016 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 Gene3D G3DSA:3.40.50.2300 1 130 6.9E-29 T 22-04-2016 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 PANTHER PTHR26402 4 204 2.0E-62 T 22-04-2016 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 204 8.3E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS02790 318cfdc45f7594336b25a4f4b2c7ce6c 223 SMART SM00448 4 118 1.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Gene3D G3DSA:3.40.50.1820 433 681 2.3E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Gene3D G3DSA:2.120.10.30 49 161 1.0E-45 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Gene3D G3DSA:2.120.10.30 202 385 1.0E-45 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 SUPERFAMILY SSF82171 204 426 1.31E-39 T 22-04-2016 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 SUPERFAMILY SSF82171 46 163 1.31E-39 T 22-04-2016 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 SUPERFAMILY SSF53474 433 681 8.6E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Pfam PF00326 Prolyl oligopeptidase family 481 681 4.1E-56 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Pfam PF07676 WD40-like Beta Propeller Repeat 285 305 7.1E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 Pfam PF07676 WD40-like Beta Propeller Repeat 99 127 2.1E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 526 556 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 PANTHER PTHR11731:SF150 200 682 1.5E-106 T 22-04-2016 SAMA_RS03965 7dedcb835b633191b844825ab406b647 688 PANTHER PTHR11731 200 682 1.5E-106 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 33 751 4.1E-212 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 Gene3D G3DSA:1.20.1050.60 375 463 2.4E-29 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 Gene3D G3DSA:1.20.1610.10 465 616 1.2E-61 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 Gene3D G3DSA:2.70.98.10 42 351 4.5E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 Pfam PF07971 Glycosyl hydrolase family 92 272 748 4.5E-163 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 PANTHER PTHR12143:SF22 415 751 1.3E-204 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 PANTHER PTHR12143:SF22 32 399 1.3E-204 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 PANTHER PTHR12143 415 751 1.3E-204 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 PANTHER PTHR12143 32 399 1.3E-204 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 Gene3D G3DSA:3.30.2080.10 617 751 2.9E-60 T 22-04-2016 SAMA_RS01560 f102d0f5b893327fe5086c7708a4e7f7 751 SUPERFAMILY SSF48208 301 743 1.96E-34 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 Gene3D G3DSA:1.10.287.950 389 606 1.8E-59 T 22-04-2016 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 SUPERFAMILY SSF58104 327 636 4.97E-80 T 22-04-2016 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 PANTHER PTHR32089:SF39 163 636 2.0E-213 T 22-04-2016 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 634 6.0E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 PANTHER PTHR32089 163 636 2.0E-213 T 22-04-2016 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 Pfam PF02743 Cache domain 52 267 4.9E-12 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 SMART SM00283 374 635 6.8E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 Gene3D G3DSA:3.30.450.20 173 280 1.1E-16 T 22-04-2016 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 Pfam PF00672 HAMP domain 286 355 2.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18310 5fd4d7784ad7cbb75050609dd19e1568 636 SMART SM00304 305 359 1.5E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 PANTHER PTHR26402 7 232 2.4E-135 T 22-04-2016 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 SMART SM00862 153 229 1.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 Gene3D G3DSA:3.40.50.2300 6 126 3.5E-34 T 22-04-2016 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 Gene3D G3DSA:1.10.10.10 129 232 6.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 PANTHER PTHR26402:SF548 7 232 2.4E-135 T 22-04-2016 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 SUPERFAMILY SSF52172 7 184 5.51E-36 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 2.4E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 SMART SM00448 7 117 1.8E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS14635 e1ea3c22090f8627f9831ac570502a08 236 Pfam PF00072 Response regulator receiver domain 9 118 3.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 Gene3D G3DSA:3.30.70.260 4 70 2.3E-9 T 22-04-2016 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 PANTHER PTHR34875 1 157 6.8E-12 T 22-04-2016 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 Pfam PF01842 ACT domain 89 158 1.6E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 Pfam PF13740 ACT domain 5 68 2.5E-10 T 22-04-2016 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 SUPERFAMILY SSF55021 86 163 9.16E-8 T 22-04-2016 SAMA_RS13280 acb6ffd782f0493d349833fb18bce6d4 175 Gene3D G3DSA:3.30.70.260 86 164 2.3E-10 T 22-04-2016 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 164 33.594 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 PANTHER PTHR10173 9 163 5.6E-73 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 9 156 6.1E-56 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 SUPERFAMILY SSF55068 4 162 2.88E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 Gene3D G3DSA:3.30.1060.10 3 160 4.1E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 PANTHER PTHR10173:SF6 9 163 5.6E-73 T 22-04-2016 SAMA_RS08905 759864b66f72311893b3230d958b326c 164 Pfam PF01625 Peptide methionine sulfoxide reductase 9 160 7.2E-59 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 374 452 1.0E-14 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 Pfam PF07559 Flagellar basal body protein FlaE 182 333 2.2E-26 T 22-04-2016 IPR011491 Flagellar hook protein FlgE SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 435 2.2E-101 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 PANTHER PTHR30435 331 453 3.8E-96 T 22-04-2016 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 PANTHER PTHR30435 1 126 3.8E-96 T 22-04-2016 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 Pfam PF00460 Flagella basal body rod protein 3 33 1.0E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 PANTHER PTHR30435:SF1 331 453 3.8E-96 T 22-04-2016 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 PANTHER PTHR30435:SF1 1 126 3.8E-96 T 22-04-2016 SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SAMA_RS12115 ca16f7d6e4913424d816fdc027f1877a 453 SUPERFAMILY SSF117143 80 414 5.89E-72 T 22-04-2016 SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Pfam PF00754 F5/8 type C domain 670 786 1.3E-8 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Pfam PF00754 F5/8 type C domain 520 629 2.4E-10 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Pfam PF00754 F5/8 type C domain 367 488 3.5E-12 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Pfam PF00754 F5/8 type C domain 821 902 7.7E-10 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 SUPERFAMILY SSF49785 363 492 1.21E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Gene3D G3DSA:2.60.120.260 814 951 8.6E-20 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Gene3D G3DSA:2.60.120.260 670 798 1.5E-17 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Gene3D G3DSA:2.60.120.260 370 493 7.8E-19 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 Gene3D G3DSA:2.60.120.260 519 646 1.5E-16 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 SUPERFAMILY SSF49785 813 950 2.34E-21 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 SUPERFAMILY SSF49785 510 645 8.51E-21 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01595 a01af29bbe967ec369bd5481f103fa2e 954 SUPERFAMILY SSF49785 663 797 1.28E-21 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 Pfam PF00571 CBS domain 6 60 8.9E-12 T 22-04-2016 IPR000644 CBS domain SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 Pfam PF00571 CBS domain 80 134 1.3E-14 T 22-04-2016 IPR000644 CBS domain SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 Gene3D G3DSA:3.10.580.10 3 135 1.8E-33 T 22-04-2016 SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 PANTHER PTHR11911 2 132 2.3E-32 T 22-04-2016 SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 SMART SM00116 87 134 3.3E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 SMART SM00116 12 60 5.0E-10 T 22-04-2016 IPR000644 CBS domain SAMA_RS05170 adede4c2a2e9ce12ba3a1b7ca5e83c4a 140 SUPERFAMILY SSF54631 3 133 3.79E-34 T 22-04-2016 SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 PANTHER PTHR18901 1 210 8.5E-59 T 22-04-2016 SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 2.7E-34 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 Gene3D G3DSA:3.40.50.1000 77 214 2.4E-37 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 Gene3D G3DSA:1.10.150.240 22 76 1.1E-10 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 179 7.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 SUPERFAMILY SSF56784 4 214 1.65E-56 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 PANTHER PTHR18901:SF40 1 210 8.5E-59 T 22-04-2016 SAMA_RS10375 9f6c60fdd31695ef32e0797e8ef0fcfb 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 185 2.0E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 Gene3D G3DSA:1.10.10.10 7 88 8.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 72 1.4E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 Pfam PF03466 LysR substrate binding domain 116 236 2.3E-10 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 SUPERFAMILY SSF46785 12 87 1.58E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 Gene3D G3DSA:3.40.190.10 131 236 3.4E-7 T 22-04-2016 SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 SUPERFAMILY SSF53850 128 275 2.71E-11 T 22-04-2016 SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 PANTHER PTHR30118:SF6 3 279 1.7E-41 T 22-04-2016 SAMA_RS11680 6d39a1719e0924f5d4cf55bfefe5f9ac 330 PANTHER PTHR30118 3 279 1.7E-41 T 22-04-2016 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 PANTHER PTHR22936:SF30 65 277 1.1E-72 T 22-04-2016 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 PANTHER PTHR22936 65 277 1.1E-72 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 SUPERFAMILY SSF144091 97 276 3.14E-37 T 22-04-2016 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 5 84 6.7E-22 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 Pfam PF01694 Rhomboid family 135 275 1.1E-28 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 Gene3D G3DSA:1.20.1540.10 98 272 2.7E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS00480 b19ed1e7804aad2601b0fda6a0cfa399 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 5 275 7.0E-112 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 SMART SM00382 153 297 3.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Gene3D G3DSA:1.10.8.60 306 377 2.0E-19 T 22-04-2016 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Pfam PF06490 Flagellar regulatory protein FleQ 7 111 8.8E-28 T 22-04-2016 IPR010518 Flagellar regulatory FleQ SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 SUPERFAMILY SSF46689 421 473 8.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 SUPERFAMILY SSF46689 345 388 8.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Pfam PF02954 Bacterial regulatory protein, Fis family 431 471 2.7E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Gene3D G3DSA:3.40.50.300 130 304 6.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 157 170 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 PANTHER PTHR32071 1 476 2.1E-203 T 22-04-2016 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Gene3D G3DSA:1.10.10.60 421 473 3.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 2.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 2.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 SUPERFAMILY SSF52540 133 374 1.07E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 PANTHER PTHR32071:SF36 1 476 2.1E-203 T 22-04-2016 SAMA_RS12045 81130ff925e27137643e4aec71ea11fa 476 Pfam PF00158 Sigma-54 interaction domain 133 300 2.1E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 PANTHER PTHR10681 18 122 1.7E-28 T 22-04-2016 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 PANTHER PTHR10681 151 177 1.7E-28 T 22-04-2016 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 Gene3D G3DSA:3.40.30.10 15 188 4.8E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 Pfam PF00578 AhpC/TSA family 18 166 1.7E-25 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 PANTHER PTHR10681:SF70 18 122 1.7E-28 T 22-04-2016 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 PANTHER PTHR10681:SF70 151 177 1.7E-28 T 22-04-2016 SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 SUPERFAMILY SSF52833 13 117 1.05E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS04230 3469b9ba3105e1cfc7b900dbdfd7b94a 194 SUPERFAMILY SSF52833 144 183 1.05E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 Gene3D G3DSA:2.30.130.30 3 103 1.5E-44 T 22-04-2016 SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 30.549 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 SMART SM01022 6 104 3.8E-31 T 22-04-2016 IPR007374 ASCH domain SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 PANTHER PTHR38088 2 104 3.6E-51 T 22-04-2016 SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 Pfam PF04266 ASCH domain 7 98 8.5E-16 T 22-04-2016 IPR007374 ASCH domain SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 PANTHER PTHR38088:SF2 2 104 3.6E-51 T 22-04-2016 SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 PIRSF PIRSF029143 1 105 3.9E-46 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 SAMA_RS14095 db90cf8af5e7431181c9968c20493835 109 SUPERFAMILY SSF88697 3 103 4.8E-34 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 SUPERFAMILY SSF55021 3 65 2.25E-11 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 SUPERFAMILY SSF55021 89 158 6.11E-9 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 PANTHER PTHR34875 1 164 6.1E-77 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 PIRSF PIRSF028103 1 166 2.1E-40 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 Gene3D G3DSA:3.30.70.260 89 162 1.6E-10 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 Gene3D G3DSA:3.30.70.260 2 66 4.4E-15 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 Pfam PF13740 ACT domain 5 64 4.7E-11 T 22-04-2016 SAMA_RS07330 570a118aa6a27db705b27b57f6d1243c 166 PANTHER PTHR34875:SF1 1 164 6.1E-77 T 22-04-2016 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 SUPERFAMILY SSF143034 2 63 1.7E-21 T 22-04-2016 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.92 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 PANTHER PTHR33343 1 64 6.4E-25 T 22-04-2016 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.4E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 4.4E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 4.4E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 Pfam PF01632 Ribosomal protein L35 2 59 7.5E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS09220 ffafab7baebc9e864d5b77e3c3b6d31d 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 4.4E-24 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SAMA_RS16240 e5b54d800f45c0209b671065d63ba271 218 SUPERFAMILY SSF49503 57 174 8.72E-17 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS16240 e5b54d800f45c0209b671065d63ba271 218 Gene3D G3DSA:2.60.40.420 50 141 3.3E-8 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS17760 de519e3eb030879706c2a4e90119fa0e 356 PANTHER PTHR34219 1 355 1.5E-65 T 22-04-2016 SAMA_RS17760 de519e3eb030879706c2a4e90119fa0e 356 Pfam PF03929 PepSY-associated TM region 6 348 6.7E-52 T 22-04-2016 IPR005625 PepSY-associated TM protein SAMA_RS17760 de519e3eb030879706c2a4e90119fa0e 356 PANTHER PTHR34219:SF3 1 355 1.5E-65 T 22-04-2016 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 PANTHER PTHR21499 10 409 1.1E-130 T 22-04-2016 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 Gene3D G3DSA:3.40.1160.10 9 252 8.6E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 PIRSF PIRSF000726 67 410 1.1E-99 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 SUPERFAMILY SSF53633 12 249 1.44E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 Pfam PF00696 Amino acid kinase family 11 237 5.9E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 ProSitePatterns PS00324 Aspartokinase signature. 13 21 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 SUPERFAMILY SSF55021 335 407 1.07E-11 T 22-04-2016 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 71 405 3.6E-99 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 PANTHER PTHR21499:SF27 10 409 1.1E-130 T 22-04-2016 SAMA_RS05465 e7d3942a841919481a74bdaed8e4adf1 410 SUPERFAMILY SSF55021 261 331 1.3E-6 T 22-04-2016 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 SUPERFAMILY SSF75620 12 355 1.24E-135 T 22-04-2016 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 PANTHER PTHR11075:SF9 1 358 1.2E-174 T 22-04-2016 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 SMART SM00937 67 180 2.6E-70 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.928 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 Pfam PF00472 RF-1 domain 215 323 2.4E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 Gene3D G3DSA:1.20.58.410 7 95 4.3E-23 T 22-04-2016 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 Gene3D G3DSA:3.30.160.20 215 290 1.9E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 Pfam PF03462 PCRF domain 14 205 1.4E-74 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 4.3E-170 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 PANTHER PTHR11075 1 358 1.2E-174 T 22-04-2016 SAMA_RS13380 587ac843ebd06da8cd547767524ee6fd 363 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 438 5.5E-117 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Pfam PF08245 Mur ligase middle domain 118 284 3.3E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 440 33.235 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 368 1.1E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 SUPERFAMILY SSF53244 303 439 2.96E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 SUPERFAMILY SSF51984 12 99 6.02E-16 T 22-04-2016 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Gene3D G3DSA:3.90.190.20 305 435 4.9E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 SUPERFAMILY SSF53623 113 301 3.21E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 PANTHER PTHR23135 1 443 2.6E-145 T 22-04-2016 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Gene3D G3DSA:3.40.1190.10 99 303 3.4E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 PANTHER PTHR23135:SF2 1 443 2.6E-145 T 22-04-2016 SAMA_RS01880 fa48e61d608bb72bc93b256ab4edaca4 443 Gene3D G3DSA:3.40.50.720 12 98 2.3E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13300 a4adec1b633f8f7fa510d8a701e00328 287 PANTHER PTHR21624 13 280 2.7E-107 T 22-04-2016 SAMA_RS13300 a4adec1b633f8f7fa510d8a701e00328 287 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 2.0E-31 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 SAMA_RS13300 a4adec1b633f8f7fa510d8a701e00328 287 PANTHER PTHR21624:SF2 13 280 2.7E-107 T 22-04-2016 SAMA_RS01600 9bd16cd487a6499f0a45fd3edab622d5 348 PANTHER PTHR13572 3 334 6.3E-137 T 22-04-2016 IPR026071 Glycosyl hydrolase family 99 SAMA_RS01600 9bd16cd487a6499f0a45fd3edab622d5 348 Pfam PF16317 Glycosyl hydrolase family 99 4 335 6.4E-175 T 22-04-2016 IPR026071 Glycosyl hydrolase family 99 SAMA_RS01600 9bd16cd487a6499f0a45fd3edab622d5 348 SUPERFAMILY SSF51445 51 146 3.98E-7 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS01600 9bd16cd487a6499f0a45fd3edab622d5 348 SUPERFAMILY SSF51445 256 315 3.98E-7 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 456 4.5E-133 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 SUPERFAMILY SSF50156 88 183 2.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 Pfam PF02163 Peptidase family M50 11 444 1.5E-87 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 Gene3D G3DSA:2.30.42.10 95 181 5.4E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 Gene3D G3DSA:2.30.42.10 206 295 4.2E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 PANTHER PTHR22939:SF78 48 456 8.0E-87 T 22-04-2016 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 Pfam PF13180 PDZ domain 229 291 1.7E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 SMART SM00228 216 285 4.9E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 SUPERFAMILY SSF50156 197 295 2.5E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS06005 61540cc203ee6a38871d8eeaf33eab38 456 PANTHER PTHR22939 48 456 8.0E-87 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 28.84 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PRINTS PR01100 Shikimate kinase family signature 7 22 9.3E-28 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PRINTS PR01100 Shikimate kinase family signature 77 86 9.3E-28 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PRINTS PR01100 Shikimate kinase family signature 98 115 9.3E-28 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PRINTS PR01100 Shikimate kinase family signature 59 67 9.3E-28 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PRINTS PR01100 Shikimate kinase family signature 31 44 9.3E-28 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 Pfam PF01202 Shikimate kinase 13 169 5.0E-56 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 SUPERFAMILY SSF52540 4 169 9.46E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 PANTHER PTHR21087 1 169 1.6E-71 T 22-04-2016 SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 Gene3D G3DSA:3.40.50.300 2 169 2.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17530 92e7511e7237ead77c9db40ca5270335 171 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS16115 dac456fc7d2784d9096b724025718c1e 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.8E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS16115 dac456fc7d2784d9096b724025718c1e 95 Gene3D G3DSA:3.30.160.100 1 95 6.9E-38 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS16115 dac456fc7d2784d9096b724025718c1e 95 SUPERFAMILY SSF69754 1 95 7.98E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS16115 dac456fc7d2784d9096b724025718c1e 95 PANTHER PTHR33231 1 95 5.9E-40 T 22-04-2016 SAMA_RS16115 dac456fc7d2784d9096b724025718c1e 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 8.5E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 37 56 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 185 207 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 316 334 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 224 243 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 82 102 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 337 356 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 148 168 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 10 33 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PRINTS PR00166 Aromatic amino acid permease signature 282 301 4.8E-68 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PANTHER PTHR32195 4 395 2.5E-159 T 22-04-2016 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 PANTHER PTHR32195:SF17 4 395 2.5E-159 T 22-04-2016 SAMA_RS15345 4e6bcde06b321eb53dca4bde499887c5 395 Pfam PF03222 Tryptophan/tyrosine permease family 4 388 2.0E-97 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 163 4.4E-18 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 SUPERFAMILY SSF52540 1 213 1.02E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 PIRSF PIRSF009320 1 214 1.3E-35 T 22-04-2016 SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 PANTHER PTHR13696:SF54 1 222 1.2E-89 T 22-04-2016 SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 PANTHER PTHR13696 1 222 1.2E-89 T 22-04-2016 SAMA_RS06730 996f52318efb018462cfb26c417cca63 222 Gene3D G3DSA:3.40.50.300 1 213 9.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 Pfam PF00263 Bacterial type II and III secretion system protein 458 620 8.1E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 478 1.8E-38 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 362 1.8E-38 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 602 1.8E-38 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 607 621 1.8E-38 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PRINTS PR00811 Bacterial general secretion pathway protein D signature 489 499 1.8E-38 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PANTHER PTHR30332:SF3 15 693 2.2E-297 T 22-04-2016 SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 38 628 1.5E-160 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 PANTHER PTHR30332 15 693 2.2E-297 T 22-04-2016 SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 Pfam PF03958 Bacterial type II/III secretion system short domain 133 194 2.0E-9 T 22-04-2016 IPR005644 NolW-like SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 Pfam PF03958 Bacterial type II/III secretion system short domain 199 268 6.6E-14 T 22-04-2016 IPR005644 NolW-like SAMA_RS00855 ddfad7fe86f5153c1882e1df5d412d0f 703 Pfam PF03958 Bacterial type II/III secretion system short domain 273 352 7.0E-18 T 22-04-2016 IPR005644 NolW-like SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PANTHER PTHR32063:SF28 1 1022 0.0 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PANTHER PTHR32063 1 1022 0.0 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.6E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:3.30.2090.10 700 787 1.5E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82714 182 263 2.35E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82866 782 1012 2.22E-43 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82866 290 489 3.27E-48 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82693 41 130 5.23E-21 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:1.10.3850.10 275 490 1.2E-56 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:1.10.3850.10 792 1011 9.0E-54 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:3.30.70.1430 41 140 1.3E-25 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 2.2E-265 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82693 267 323 2.44E-21 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82693 137 181 2.44E-21 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:3.30.70.1430 555 650 9.3E-12 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82693 553 650 2.88E-16 T 22-04-2016 SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 SUPERFAMILY SSF82714 701 783 7.06E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS17035 a209cef808074d7c0a31c78d237904c1 1023 Gene3D G3DSA:3.30.2090.10 181 263 4.7E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 126 2.6E-19 T 22-04-2016 IPR029095 NarX-like, N-terminal SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 SMART SM00304 173 225 1.8E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 Gene3D G3DSA:3.30.565.10 432 565 2.4E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 PIRSF PIRSF003167 1 570 3.4E-174 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 SMART SM00387 470 564 4.9E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 Pfam PF07730 Histidine kinase 364 429 1.8E-16 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 Pfam PF00672 HAMP domain 155 221 2.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 PANTHER PTHR24421 359 565 4.9E-211 T 22-04-2016 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 PANTHER PTHR24421 1 284 4.9E-211 T 22-04-2016 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 SUPERFAMILY SSF55874 438 562 3.41E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 563 2.5E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 PANTHER PTHR24421:SF25 359 565 4.9E-211 T 22-04-2016 SAMA_RS03430 5eeec127ae9172f97ecd3f612931cb84 570 PANTHER PTHR24421:SF25 1 284 4.9E-211 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 34 420 4.1E-115 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 186 201 7.9E-21 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 7.9E-21 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 7.9E-21 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 7.9E-21 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PANTHER PTHR13789:SF233 7 421 2.5E-194 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 PANTHER PTHR13789 7 421 2.5E-194 T 22-04-2016 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 Gene3D G3DSA:3.50.50.60 298 385 2.9E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 Gene3D G3DSA:3.50.50.60 33 212 2.9E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 Pfam PF01494 FAD binding domain 33 370 7.0E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 SUPERFAMILY SSF51905 297 414 1.41E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13445 e3ed04a05276bfe8d115969eb3cc120e 422 SUPERFAMILY SSF51905 33 207 1.41E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 190 2.1E-36 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 SUPERFAMILY SSF89392 21 201 4.71E-44 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 200 25.772 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 11 202 2.0E-37 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 Gene3D G3DSA:2.50.20.10 22 201 3.1E-42 T 22-04-2016 SAMA_RS09250 2044503c46b81077ebef065bf0f79751 203 PANTHER PTHR35869 5 203 6.8E-37 T 22-04-2016 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 PANTHER PTHR30246 1 214 2.1E-127 T 22-04-2016 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 211 1.9E-83 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 Gene3D G3DSA:3.20.20.70 8 211 5.7E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 SUPERFAMILY SSF51569 8 211 1.01E-68 T 22-04-2016 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 130 143 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 Pfam PF01081 KDPG and KHG aldolase 12 204 3.0E-81 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 SAMA_RS09440 36103af45c60947aee5d96f7edcc961e 214 PANTHER PTHR30246:SF0 1 214 2.1E-127 T 22-04-2016 SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 PANTHER PTHR10953 1 242 3.0E-73 T 22-04-2016 SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 32 60 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 Pfam PF00899 ThiF family 10 238 5.2E-57 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 Gene3D G3DSA:3.40.50.720 4 242 2.9E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 PANTHER PTHR10953:SF158 1 242 3.0E-73 T 22-04-2016 SAMA_RS09730 ef16892de20ac883e61cac96e8c6c7f2 250 SUPERFAMILY SSF69572 5 243 4.58E-75 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 Gene3D G3DSA:3.20.20.70 3 291 5.8E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 SMART SM00729 13 207 4.8E-14 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 PANTHER PTHR22960 4 280 3.3E-119 T 22-04-2016 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 SUPERFAMILY SSF102114 4 275 1.16E-74 T 22-04-2016 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 311 1.7E-39 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 Pfam PF04055 Radical SAM superfamily 18 177 1.5E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 327 40.291 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 Pfam PF13353 4Fe-4S single cluster domain 20 119 4.8E-7 T 22-04-2016 SAMA_RS00600 1677e87fed1d15024f9442b28f79575a 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 327 1.1E-113 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 PANTHER PTHR37480 2 400 4.1E-256 T 22-04-2016 SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.5E-35 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.842 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Gene3D G3DSA:3.40.50.720 177 281 7.0E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Gene3D G3DSA:3.40.50.720 42 144 7.0E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.1E-110 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS06450 b94c1caf881c2e74c19431830228dcd3 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 7.0E-30 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 Gene3D G3DSA:1.10.287.950 298 515 6.0E-57 T 22-04-2016 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 2.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 2.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 2.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 2.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 SMART SM00304 215 269 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 SMART SM00283 284 545 6.7E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 Pfam PF00672 HAMP domain 196 266 1.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 544 3.7E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 PANTHER PTHR32089 145 546 1.6E-103 T 22-04-2016 SAMA_RS04030 eb2e72ed46058ab1190b0f48101842f9 546 SUPERFAMILY SSF58104 237 544 8.11E-74 T 22-04-2016 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 Pfam PF07732 Multicopper oxidase 97 212 7.4E-13 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 65 389 1.7E-145 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 174 189 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 193 209 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 132 149 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 114 130 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 88 106 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 PRINTS PR00695 Copper containing nitrite reductase signature 149 168 7.8E-52 T 22-04-2016 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 44 5.7E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 SUPERFAMILY SSF49503 218 387 1.48E-69 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 Gene3D G3DSA:2.60.40.420 62 206 2.9E-27 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 Pfam PF00394 Multicopper oxidase 227 378 9.3E-15 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 Gene3D G3DSA:2.60.40.420 207 363 1.1E-68 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS14045 97f50652145219c4be9bec60751b9491 393 SUPERFAMILY SSF49503 63 218 3.23E-36 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 SUPERFAMILY SSF56655 11 259 6.15E-73 T 22-04-2016 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 PANTHER PTHR20854 1 250 7.3E-80 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 Gene3D G3DSA:3.40.190.80 158 257 7.8E-41 T 22-04-2016 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 PANTHER PTHR20854:SF5 1 250 7.3E-80 T 22-04-2016 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 5.6E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 5.6E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 5.6E-8 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 Gene3D G3DSA:3.30.540.10 12 157 1.2E-41 T 22-04-2016 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 256 5.0E-92 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 SAMA_RS11705 54eec765e04dc28ef9e1f5b782b44517 263 Pfam PF00459 Inositol monophosphatase family 16 248 1.0E-46 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 PANTHER PTHR12715:SF8 1 292 2.1E-54 T 22-04-2016 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 Pfam PF00892 EamA-like transporter family 146 277 7.4E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 Pfam PF00892 EamA-like transporter family 2 136 1.4E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 SUPERFAMILY SSF103481 182 279 7.72E-14 T 22-04-2016 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 SUPERFAMILY SSF103481 31 139 9.94E-9 T 22-04-2016 SAMA_RS07325 5891ce3e8a00a080e5571f6418c95402 294 PANTHER PTHR12715 1 292 2.1E-54 T 22-04-2016 SAMA_RS07450 712641c0f24ea1952c6c0e601358ab4c 305 PANTHER PTHR31752:SF13 86 303 2.9E-27 T 22-04-2016 SAMA_RS07450 712641c0f24ea1952c6c0e601358ab4c 305 PANTHER PTHR31752 86 303 2.9E-27 T 22-04-2016 SAMA_RS07450 712641c0f24ea1952c6c0e601358ab4c 305 Pfam PF03547 Membrane transport protein 158 301 4.9E-15 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SAMA_RS07450 712641c0f24ea1952c6c0e601358ab4c 305 Pfam PF03547 Membrane transport protein 3 129 2.7E-16 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 PANTHER PTHR14226 178 373 5.3E-165 T 22-04-2016 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 PANTHER PTHR14226:SF34 178 373 5.3E-165 T 22-04-2016 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 Gene3D G3DSA:3.40.1090.10 7 212 4.5E-8 T 22-04-2016 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 SUPERFAMILY SSF52151 5 247 2.88E-46 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 PANTHER PTHR14226 1 160 5.3E-165 T 22-04-2016 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 PANTHER PTHR14226:SF34 1 160 5.3E-165 T 22-04-2016 SAMA_RS06075 082e5ed6a4aab86c1dc110d243b18bb7 374 Pfam PF01734 Patatin-like phospholipase 7 212 3.4E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SAMA_RS17650 5f18e29f1d434e2df0b0d760dc24c730 167 SUPERFAMILY SSF54637 17 153 7.08E-25 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17650 5f18e29f1d434e2df0b0d760dc24c730 167 PIRSF PIRSF020565 9 162 6.2E-54 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted SAMA_RS17650 5f18e29f1d434e2df0b0d760dc24c730 167 Gene3D G3DSA:3.10.129.10 10 148 8.6E-21 T 22-04-2016 IPR029069 HotDog domain SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 SUPERFAMILY SSF58104 354 663 3.14E-72 T 22-04-2016 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 PANTHER PTHR32089 307 665 1.2E-104 T 22-04-2016 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 660 9.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 SMART SM00283 394 662 1.1E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 452 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 Pfam PF08376 Nitrate and nitrite sensing 60 295 7.5E-51 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 PANTHER PTHR32089:SF34 307 665 1.2E-104 T 22-04-2016 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 Pfam PF00672 HAMP domain 316 379 1.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 SMART SM00304 333 386 0.0037 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS08935 1f90fbd84235631d7d09dac09ea7ce0c 666 Gene3D G3DSA:1.10.287.950 418 633 6.9E-55 T 22-04-2016 SAMA_RS11805 3e7ea5054cd29862ac9bcde0c51c8b07 257 Pfam PF00534 Glycosyl transferases group 1 79 189 1.5E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SAMA_RS11805 3e7ea5054cd29862ac9bcde0c51c8b07 257 SUPERFAMILY SSF53756 14 256 4.21E-22 T 22-04-2016 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 13 259 1.1E-114 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 260 438 3.0E-90 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 PANTHER PTHR21631 5 439 1.9E-174 T 22-04-2016 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 Pfam PF00463 Isocitrate lyase family 261 438 1.3E-51 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 Pfam PF00463 Isocitrate lyase family 16 259 1.5E-59 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 PIRSF PIRSF001362 2 439 1.9E-226 T 22-04-2016 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 ProSitePatterns PS00161 Isocitrate lyase signature. 197 202 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 SUPERFAMILY SSF51621 9 438 2.29E-155 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS12445 2b48ab6ef76117b0354972c9daf1111f 439 Gene3D G3DSA:3.20.20.60 9 421 1.3E-169 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 Gene3D G3DSA:3.20.20.70 30 132 8.8E-10 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 34.706 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 4.8E-124 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 Pfam PF04551 GcpE protein 14 354 6.1E-132 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 PANTHER PTHR30454 1 364 9.4E-220 T 22-04-2016 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 SUPERFAMILY SSF56014 265 354 1.15E-11 T 22-04-2016 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 SUPERFAMILY SSF51717 15 208 1.18E-10 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SAMA_RS12370 ba963621e4cece628cdf021abb4a42a8 372 PIRSF PIRSF004640 1 363 1.2E-145 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SAMA_RS14800 4322acc100ed1db1ed8569fbe0d29bf1 208 Pfam PF01810 LysE type translocator 16 201 3.1E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS14800 4322acc100ed1db1ed8569fbe0d29bf1 208 PANTHER PTHR30086:SF9 1 208 2.6E-119 T 22-04-2016 SAMA_RS14800 4322acc100ed1db1ed8569fbe0d29bf1 208 PANTHER PTHR30086 1 208 2.6E-119 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 Gene3D G3DSA:2.40.160.10 346 391 1.5E-15 T 22-04-2016 IPR023614 Porin domain SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 Gene3D G3DSA:2.40.160.10 47 306 1.5E-15 T 22-04-2016 IPR023614 Porin domain SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 SUPERFAMILY SSF56935 197 314 1.36E-34 T 22-04-2016 SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 SUPERFAMILY SSF56935 17 167 1.36E-34 T 22-04-2016 SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 SUPERFAMILY SSF56935 346 393 1.36E-34 T 22-04-2016 SAMA_RS08590 ac2e9d93154615262dda22120b4f442d 393 Pfam PF13609 Gram-negative porin 8 376 3.6E-11 T 22-04-2016 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PANTHER PTHR33751 120 322 3.9E-107 T 22-04-2016 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PANTHER PTHR33751 25 80 3.9E-107 T 22-04-2016 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 SUPERFAMILY SSF46626 56 79 1.12E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 SUPERFAMILY SSF46626 134 238 1.12E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Gene3D G3DSA:1.10.760.10 149 243 1.0E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Gene3D G3DSA:1.10.760.10 61 83 1.0E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Gene3D G3DSA:1.10.760.10 244 323 6.4E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 SUPERFAMILY SSF46626 238 322 1.63E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 229 2.1E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 317 5.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PIRSF PIRSF000006 1 323 3.2E-108 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PRINTS PR00605 Class IC cytochrome C signature 164 175 1.2E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.2E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 84 7.4E-25 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PANTHER PTHR33751:SF1 120 322 3.9E-107 T 22-04-2016 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 PANTHER PTHR33751:SF1 25 80 3.9E-107 T 22-04-2016 SAMA_RS09355 09861997811a5f694ea9511da0cff0d8 323 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 120 323 2.1E-61 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 SAMA_RS08700 351a57002f125b87c9a147180ca97bbc 92 SUPERFAMILY SSF54534 3 87 7.2E-28 T 22-04-2016 SAMA_RS08700 351a57002f125b87c9a147180ca97bbc 92 Gene3D G3DSA:3.10.50.40 4 91 1.8E-32 T 22-04-2016 SAMA_RS08700 351a57002f125b87c9a147180ca97bbc 92 Pfam PF13616 PPIC-type PPIASE domain 12 89 1.6E-20 T 22-04-2016 SAMA_RS08700 351a57002f125b87c9a147180ca97bbc 92 PANTHER PTHR10657 6 87 4.9E-35 T 22-04-2016 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Gene3D G3DSA:1.10.10.60 411 468 1.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Pfam PF02954 Bacterial regulatory protein, Fis family 422 466 1.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Pfam PF13426 PAS domain 20 126 3.4E-16 T 22-04-2016 IPR000014 PAS domain SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 382 391 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 255 270 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 SUPERFAMILY SSF55785 20 137 2.09E-26 T 22-04-2016 IPR000014 PAS domain SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Gene3D G3DSA:3.30.450.20 12 126 2.1E-27 T 22-04-2016 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 SUPERFAMILY SSF46689 380 468 8.51E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 SMART SM00091 9 75 9.5E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 PANTHER PTHR32071:SF16 118 472 7.8E-154 T 22-04-2016 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 SUPERFAMILY SSF52540 169 409 4.82E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Pfam PF00158 Sigma-54 interaction domain 169 335 9.9E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 SMART SM00382 189 333 4.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Gene3D G3DSA:1.10.8.60 342 410 4.2E-20 T 22-04-2016 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 PANTHER PTHR32071 118 472 7.8E-154 T 22-04-2016 SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 Gene3D G3DSA:3.40.50.300 167 341 4.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14805 85db44da6a99b4f1e18ea13267d04c18 474 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 135 8.6E-21 T 22-04-2016 IPR000014 PAS domain SAMA_RS15525 28957147a0ed0100f3bd0e1bae88a9e6 164 SUPERFAMILY SSF55729 1 160 9.12E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS15525 28957147a0ed0100f3bd0e1bae88a9e6 164 PANTHER PTHR23091 1 161 8.3E-15 T 22-04-2016 SAMA_RS15525 28957147a0ed0100f3bd0e1bae88a9e6 164 Pfam PF13673 Acetyltransferase (GNAT) domain 52 138 8.9E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS15525 28957147a0ed0100f3bd0e1bae88a9e6 164 Gene3D G3DSA:3.40.630.30 1 163 6.3E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 PANTHER PTHR38469:SF1 1 623 1.0E-200 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 PANTHER PTHR38469:SF1 646 729 1.0E-200 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 PANTHER PTHR38469 1 623 1.0E-200 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 PANTHER PTHR38469 646 729 1.0E-200 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 Gene3D G3DSA:2.40.10.10 650 709 1.4E-14 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 Gene3D G3DSA:2.40.10.10 585 597 1.4E-14 T 22-04-2016 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 SUPERFAMILY SSF50494 651 722 2.63E-25 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 SUPERFAMILY SSF50494 46 94 2.63E-25 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 SUPERFAMILY SSF50494 171 280 2.63E-25 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 Pfam PF10459 Peptidase S46 18 725 1.6E-277 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SAMA_RS15970 71e403ac8c91854d0c285590f1932993 729 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 658 668 - T 22-04-2016 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 PANTHER PTHR10909 383 469 4.0E-238 T 22-04-2016 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 PANTHER PTHR10909 1 366 4.0E-238 T 22-04-2016 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 441 6.6E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 SUPERFAMILY SSF47203 284 452 3.87E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 SUPERFAMILY SSF56645 38 289 7.33E-57 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 456 574 2.2E-18 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 28 9.0E-5 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Gene3D G3DSA:1.10.540.10 39 160 1.5E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 268 2.3E-19 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 PANTHER PTHR10909:SF296 383 469 4.0E-238 T 22-04-2016 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 PANTHER PTHR10909:SF296 1 366 4.0E-238 T 22-04-2016 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 159 6.1E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Gene3D G3DSA:1.20.140.10 270 452 2.7E-51 T 22-04-2016 SAMA_RS09085 ee3adc0b966ac83f8f97b5592be7c117 578 Gene3D G3DSA:2.40.110.10 162 269 3.9E-27 T 22-04-2016 SAMA_RS07750 e9691b68541d99d464fae74de73682a1 341 Pfam PF01594 Domain of unknown function DUF20 2 311 1.9E-66 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SAMA_RS07750 e9691b68541d99d464fae74de73682a1 341 PANTHER PTHR21716 1 325 7.6E-189 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SAMA_RS07750 e9691b68541d99d464fae74de73682a1 341 PANTHER PTHR21716:SF17 1 325 7.6E-189 T 22-04-2016 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 2.0E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 Gene3D G3DSA:1.10.10.10 2 97 1.9E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 48 1.8E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.8E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 1.8E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 1.8E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 SMART SM00418 15 94 3.4E-28 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PANTHER PTHR33154 1 97 1.1E-29 T 22-04-2016 SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 SUPERFAMILY SSF46785 6 97 1.89E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04805 a80196823aa84a6ea201fdd8da671f65 98 PANTHER PTHR33154:SF10 1 97 1.1E-29 T 22-04-2016 SAMA_RS02875 efa74339a848d36d87d30df54dff4df6 106 SUPERFAMILY SSF54913 1 105 4.82E-38 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SAMA_RS02875 efa74339a848d36d87d30df54dff4df6 106 PANTHER PTHR23419 4 106 2.6E-38 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SAMA_RS02875 efa74339a848d36d87d30df54dff4df6 106 Gene3D G3DSA:3.30.70.830 2 105 5.5E-40 T 22-04-2016 SAMA_RS02875 efa74339a848d36d87d30df54dff4df6 106 Pfam PF03091 CutA1 divalent ion tolerance protein 5 102 2.9E-35 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 299 364 3.9E-15 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PANTHER PTHR22617 1 683 5.7E-233 T 22-04-2016 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SUPERFAMILY SSF47384 300 365 2.59E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:2.40.50.180 574 637 1.6E-9 T 22-04-2016 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SUPERFAMILY SSF55874 367 548 3.41E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:1.10.287.560 299 365 1.8E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SMART SM00073 4 102 1.1E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:1.20.120.160 2 141 3.7E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 PANTHER PTHR22617:SF20 1 683 5.7E-233 T 22-04-2016 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SUPERFAMILY SSF47226 5 129 2.62E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Pfam PF01627 Hpt domain 9 105 9.0E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:2.30.30.40 550 571 3.8E-23 T 22-04-2016 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:2.30.30.40 638 682 3.8E-23 T 22-04-2016 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 549 2.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Pfam PF01584 CheW-like domain 557 683 3.5E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SMART SM00387 409 550 3.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SMART SM01231 299 364 1.1E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SMART SM00260 542 682 2.6E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 SUPERFAMILY SSF50341 549 682 6.8E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18175 f85e9557c7a558a0fc6d0e9258a59249 695 Gene3D G3DSA:3.30.565.10 366 549 1.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 564 5.3E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 403 561 1.9E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 SMART SM00267 391 566 1.1E-52 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 SUPERFAMILY SSF55073 407 565 4.63E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 Gene3D G3DSA:3.30.70.270 404 566 1.8E-48 T 22-04-2016 SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 PANTHER PTHR10799 257 561 2.5E-18 T 22-04-2016 SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 PANTHER PTHR10799 13 30 2.5E-18 T 22-04-2016 SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 PANTHER PTHR10799:SF710 257 561 2.5E-18 T 22-04-2016 SAMA_RS12425 9457726dd91b108d872e4538b72e50b0 581 PANTHER PTHR10799:SF710 13 30 2.5E-18 T 22-04-2016 SAMA_RS17370 a5567e9c6d33eb55d3ca174bd303a4dc 384 Gene3D G3DSA:2.40.160.10 23 384 4.0E-50 T 22-04-2016 IPR023614 Porin domain SAMA_RS17370 a5567e9c6d33eb55d3ca174bd303a4dc 384 SUPERFAMILY SSF56935 23 384 4.88E-43 T 22-04-2016 SAMA_RS17370 a5567e9c6d33eb55d3ca174bd303a4dc 384 Pfam PF00267 Gram-negative porin 99 384 3.3E-12 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SAMA_RS17370 a5567e9c6d33eb55d3ca174bd303a4dc 384 PANTHER PTHR34501 2 384 1.4E-137 T 22-04-2016 SAMA_RS17370 a5567e9c6d33eb55d3ca174bd303a4dc 384 PANTHER PTHR34501:SF2 2 384 1.4E-137 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 753 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 Gene3D G3DSA:3.20.20.210 390 755 2.7E-128 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 Gene3D G3DSA:3.20.20.210 5 385 4.6E-136 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 754 35.696 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 PIRSF PIRSF000382 1 756 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 PANTHER PTHR30519:SF0 1 755 0.0 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 SUPERFAMILY SSF51726 392 753 1.19E-118 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 311 3.1E-115 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 749 1.3E-145 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 SUPERFAMILY SSF51726 5 374 1.83E-104 T 22-04-2016 SAMA_RS13765 25502df02e9bdb1674074c39374a3ab4 756 PANTHER PTHR30519 1 755 0.0 T 22-04-2016 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 Pfam PF08281 Sigma-70, region 4 134 180 1.2E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.7E-98 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 SUPERFAMILY SSF88946 2 108 1.29E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 Gene3D G3DSA:1.10.1740.10 3 111 8.4E-38 T 22-04-2016 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 PANTHER PTHR30173:SF1 1 187 1.1E-54 T 22-04-2016 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 Gene3D G3DSA:1.10.10.10 123 188 7.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 SUPERFAMILY SSF88659 124 186 2.99E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 1.8E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 PANTHER PTHR30173 1 187 1.1E-54 T 22-04-2016 SAMA_RS04570 25f819d4cf69dd9a18a6ee43ca15ddf0 192 Pfam PF04542 Sigma-70 region 2 25 92 1.2E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 PIRSF PIRSF000296 5 332 5.7E-70 T 22-04-2016 IPR024168 Catalase, SrpA-type, predicted SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 SMART SM01060 35 332 0.0033 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 PANTHER PTHR11465 13 332 2.3E-36 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 Gene3D G3DSA:2.40.180.10 9 332 2.2E-63 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 Pfam PF00199 Catalase 57 330 4.0E-14 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 SUPERFAMILY SSF56634 6 332 2.22E-68 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS03940 439e74e0ce9454f20c878c1cd8c59b22 332 PANTHER PTHR11465:SF16 13 332 2.3E-36 T 22-04-2016 SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 181 2.2E-85 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 181 1.9E-88 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 PANTHER PTHR10422:SF23 21 161 1.9E-91 T 22-04-2016 SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 SUPERFAMILY SSF46626 17 197 1.66E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 PANTHER PTHR10422 21 161 1.9E-91 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09345 4283d0a859fb32be3f307b1c5865026d 201 Gene3D G3DSA:1.10.760.10 17 197 3.2E-37 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 PANTHER PTHR12586 2 436 1.7E-219 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 Pfam PF00614 Phospholipase D Active site motif 121 146 1.1E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 SUPERFAMILY SSF56024 214 415 1.39E-27 T 22-04-2016 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 Gene3D G3DSA:3.30.870.10 14 178 4.0E-13 T 22-04-2016 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 Gene3D G3DSA:3.30.870.10 235 395 4.4E-18 T 22-04-2016 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 PANTHER PTHR12586:SF3 2 436 1.7E-219 T 22-04-2016 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 SMART SM00155 338 365 0.72 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 SMART SM00155 120 146 0.0028 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 SUPERFAMILY SSF56024 11 184 4.71E-28 T 22-04-2016 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 PIRSF PIRSF000850 1 437 5.2E-167 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SAMA_RS09105 cb56ed0150fcc88c10c99424c32daba1 437 Pfam PF13091 PLD-like domain 243 382 1.4E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Gene3D G3DSA:3.20.20.220 192 535 5.0E-104 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 76 189 3.2E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Pfam PF00171 Aldehyde dehydrogenase family 579 1037 1.7E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 PANTHER PTHR11699 545 1042 7.4E-190 T 22-04-2016 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Pfam PF01619 Proline dehydrogenase 201 492 3.8E-89 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 SUPERFAMILY SSF53720 554 1039 1.57E-132 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Gene3D G3DSA:3.40.309.10 826 1013 8.9E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 PANTHER PTHR11699:SF18 545 1042 7.4E-190 T 22-04-2016 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1034 2.1E-214 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 SUPERFAMILY SSF81935 17 191 1.31E-63 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 SUPERFAMILY SSF51730 192 536 6.67E-111 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Gene3D G3DSA:3.40.605.10 573 825 2.1E-76 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 Gene3D G3DSA:1.10.2060.10 73 190 3.3E-51 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SAMA_RS14020 032353866c9ddbb1fbf70d31ab73e51a 1058 PIRSF PIRSF000197 8 1053 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SAMA_RS13525 cacfa671704e0b695d6e0b7cefe0edc8 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SAMA_RS13525 cacfa671704e0b695d6e0b7cefe0edc8 368 PANTHER PTHR30474 1 368 4.8E-173 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SAMA_RS13525 cacfa671704e0b695d6e0b7cefe0edc8 368 Pfam PF01098 Cell cycle protein 22 364 8.6E-115 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SAMA_RS13525 cacfa671704e0b695d6e0b7cefe0edc8 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.8E-136 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SAMA_RS13525 cacfa671704e0b695d6e0b7cefe0edc8 368 PANTHER PTHR30474:SF1 1 368 4.8E-173 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PANTHER PTHR11963:SF20 43 425 2.7E-210 T 22-04-2016 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 Pfam PF12404 Peptidase 5 80 8.0E-28 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PRINTS PR00481 Cytosol aminopeptidase signature 209 230 1.6E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PRINTS PR00481 Cytosol aminopeptidase signature 187 204 1.6E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PRINTS PR00481 Cytosol aminopeptidase signature 268 288 1.6E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 1.6E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PRINTS PR00481 Cytosol aminopeptidase signature 296 311 1.6E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 Gene3D G3DSA:3.40.630.10 93 425 5.3E-107 T 22-04-2016 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 272 279 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 SUPERFAMILY SSF53187 102 425 1.0E-95 T 22-04-2016 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PIRSF PIRSF036388 1 427 8.5E-197 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 107 419 9.4E-94 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SAMA_RS04105 bd9d4e8aa9e7baecacdf680f9e4a69e8 427 PANTHER PTHR11963 43 425 2.7E-210 T 22-04-2016 SAMA_RS15850 390c1f44abdc6c84c671fe860987e05f 293 SUPERFAMILY SSF103481 38 137 2.09E-10 T 22-04-2016 SAMA_RS15850 390c1f44abdc6c84c671fe860987e05f 293 Pfam PF00892 EamA-like transporter family 148 275 2.1E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS15850 390c1f44abdc6c84c671fe860987e05f 293 Pfam PF00892 EamA-like transporter family 11 136 7.3E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS15850 390c1f44abdc6c84c671fe860987e05f 293 PANTHER PTHR22911 7 291 2.9E-47 T 22-04-2016 SAMA_RS15850 390c1f44abdc6c84c671fe860987e05f 293 SUPERFAMILY SSF103481 182 276 8.89E-14 T 22-04-2016 SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 Gene3D G3DSA:3.90.230.10 181 437 5.2E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 Pfam PF05195 Aminopeptidase P, N-terminal domain 10 127 1.0E-31 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 Pfam PF00557 Metallopeptidase family M24 183 416 7.1E-61 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 SMART SM01011 5 138 1.8E-45 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 Gene3D G3DSA:3.40.350.10 9 180 2.2E-43 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 PANTHER PTHR10804 10 438 2.2E-135 T 22-04-2016 SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 PANTHER PTHR10804:SF17 10 438 2.2E-135 T 22-04-2016 SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 SUPERFAMILY SSF55920 177 438 8.77E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS07975 7686ed5b212402ad598200bfacad5a4d 441 SUPERFAMILY SSF53092 6 176 7.85E-39 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 360 3.8E-84 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 224 360 8.7E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 SMART SM00047 203 372 4.8E-27 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 PANTHER PTHR33308:SF3 196 359 3.7E-29 T 22-04-2016 SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 PANTHER PTHR33308 196 359 3.7E-29 T 22-04-2016 SAMA_RS12090 be9ed5620711ef87d70ff6a9ce00f5ac 372 Pfam PF10135 Rod binding protein 48 98 4.4E-13 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 PANTHER PTHR30386:SF7 15 343 6.7E-59 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 SUPERFAMILY SSF111369 45 95 1.11E-7 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 Gene3D G3DSA:2.40.50.100 46 78 5.7E-16 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 Gene3D G3DSA:2.40.50.100 198 230 5.7E-16 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 SUPERFAMILY SSF111369 179 250 3.4E-6 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 PANTHER PTHR30386 15 343 6.7E-59 T 22-04-2016 SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 274 3.5E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS05220 c5d8d861d587c51ddb0af3d97826582f 354 SUPERFAMILY SSF111369 108 165 4.05E-6 T 22-04-2016 SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 Pfam PF00156 Phosphoribosyl transferase domain 30 164 1.9E-16 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 PANTHER PTHR32315 1 181 3.6E-83 T 22-04-2016 SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 Gene3D G3DSA:3.40.50.2020 6 179 3.0E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 5.1E-72 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.799 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SAMA_RS06840 c7077fea0a3259849e8fb0e4d305e5ee 181 SUPERFAMILY SSF53271 11 177 7.24E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS04150 b9197ce99f55d50a674d01d0cf24aec7 151 SUPERFAMILY SSF102400 1 142 1.44E-44 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SAMA_RS04150 b9197ce99f55d50a674d01d0cf24aec7 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 138 9.5E-36 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SAMA_RS04150 b9197ce99f55d50a674d01d0cf24aec7 151 Gene3D G3DSA:3.40.50.10110 1 143 1.2E-45 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SAMA_RS04150 b9197ce99f55d50a674d01d0cf24aec7 151 PANTHER PTHR38767 2 146 1.7E-49 T 22-04-2016 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 PANTHER PTHR22911 2 292 9.8E-150 T 22-04-2016 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 Pfam PF00892 EamA-like transporter family 9 143 7.0E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 PANTHER PTHR22911:SF41 2 292 9.8E-150 T 22-04-2016 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 TIGRFAM TIGR00688 rarD: protein RarD 9 262 1.3E-86 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 SUPERFAMILY SSF103481 48 145 9.68E-13 T 22-04-2016 SAMA_RS01780 17118355e3b69dbe0161dc6dd1f936e9 293 SUPERFAMILY SSF103481 203 286 4.05E-6 T 22-04-2016 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 PANTHER PTHR30390 1 196 2.7E-131 T 22-04-2016 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.683 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 Pfam PF13580 SIS domain 9 144 1.3E-37 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 Gene3D G3DSA:3.40.50.10490 1 191 1.5E-64 T 22-04-2016 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 PANTHER PTHR30390:SF5 1 196 2.7E-131 T 22-04-2016 SAMA_RS17470 69d3a4d2a1377cd650a3efafc1979223 197 SUPERFAMILY SSF53697 1 191 5.26E-60 T 22-04-2016 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 PIRSF PIRSF002134 1 118 1.7E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 PANTHER PTHR10871 2 118 1.6E-68 T 22-04-2016 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 Gene3D G3DSA:1.10.8.50 2 71 5.0E-29 T 22-04-2016 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.2E-54 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 SUPERFAMILY SSF46946 2 114 1.85E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.8E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.648 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01230 76ebac4bad145298aac40390897fceda 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 PANTHER PTHR10799:SF774 694 927 1.6E-35 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 574 660 2.2E-6 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SUPERFAMILY SSF53850 252 467 1.95E-31 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SUPERFAMILY SSF55073 776 930 4.71E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SUPERFAMILY SSF53850 26 246 1.09E-35 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 429 467 7.8E-12 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 23 110 4.3E-24 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 252 336 7.8E-12 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 677 715 2.9E-25 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 495 573 2.9E-25 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 206 246 4.3E-24 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 PANTHER PTHR10799 694 927 1.6E-35 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SMART SM00267 760 932 4.4E-59 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SMART SM00062 251 469 1.6E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SMART SM00062 496 717 9.4E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SMART SM00062 27 246 8.5E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 SUPERFAMILY SSF53850 497 716 2.59E-43 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 244 2.5E-26 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 253 466 7.3E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 497 714 9.1E-36 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.30.70.270 773 930 2.3E-53 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Gene3D G3DSA:3.40.190.10 347 410 1.8E-5 T 22-04-2016 SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 Pfam PF00990 Diguanylate cyclase, GGDEF domain 771 927 3.6E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09655 66164b24947db17ffc85b866ddcde5a4 932 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 768 929 3.8E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 SUPERFAMILY SSF81296 1165 1238 1.28E-8 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Pfam PF01833 IPT/TIG domain 1165 1238 7.2E-5 T 22-04-2016 IPR002909 IPT domain GO:0005515 SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Pfam PF01833 IPT/TIG domain 467 522 7.9E-5 T 22-04-2016 IPR002909 IPT domain GO:0005515 SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Gene3D G3DSA:4.10.1080.10 234 347 1.1E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Gene3D G3DSA:2.60.40.10 460 531 3.6E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Gene3D G3DSA:2.60.40.10 1165 1238 5.5E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 Gene3D G3DSA:2.60.120.380 90 209 3.0E-7 T 22-04-2016 SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 ProSitePatterns PS00018 EF-hand calcium-binding domain. 235 247 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS03760 2515147e98eed8e72a68c2586b972841 1387 SUPERFAMILY SSF81296 460 535 3.31E-9 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 Gene3D G3DSA:3.40.50.150 74 211 4.1E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 PIRSF PIRSF018249 1 278 4.9E-75 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 PANTHER PTHR10108:SF886 28 279 3.7E-52 T 22-04-2016 SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 Pfam PF13847 Methyltransferase domain 93 206 7.4E-13 T 22-04-2016 IPR025714 Methyltransferase domain SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 PANTHER PTHR10108 28 279 3.7E-52 T 22-04-2016 SAMA_RS10295 835ca7e3f585c41e62d6aa93acd3e371 279 SUPERFAMILY SSF53335 12 259 5.32E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.799 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 Gene3D G3DSA:3.50.80.10 3 144 3.7E-55 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 SUPERFAMILY SSF69500 2 144 1.31E-55 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 5.2E-64 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 5.3E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SAMA_RS17705 212e268edc63f1383bc7e281be957db8 145 PANTHER PTHR10472 2 144 6.5E-72 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SAMA_RS03300 001b8b6d959ba1f7f110fd893b189185 135 Gene3D G3DSA:3.40.190.10 20 133 4.4E-12 T 22-04-2016 SAMA_RS03300 001b8b6d959ba1f7f110fd893b189185 135 SUPERFAMILY SSF53850 16 133 9.77E-15 T 22-04-2016 SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 200 42.597 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 189 9.8E-81 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 PANTHER PTHR11670:SF27 1 201 7.4E-107 T 22-04-2016 SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 Gene3D G3DSA:3.20.19.10 1 195 6.5E-45 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 SUPERFAMILY SSF52016 1 194 3.14E-55 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 Pfam PF00694 Aconitase C-terminal domain 1 125 1.9E-35 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS01810 44f593c04ca70b598f3b2194eacabfad 201 PANTHER PTHR11670 1 201 7.4E-107 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 Pfam PF02872 5'-nucleotidase, C-terminal domain 378 580 6.2E-18 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PANTHER PTHR11575:SF6 1 683 8.2E-273 T 22-04-2016 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 Pfam PF00149 Calcineurin-like phosphoesterase 35 281 1.8E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PRINTS PR01607 Apyrase family signature 235 252 1.6E-18 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PRINTS PR01607 Apyrase family signature 305 325 1.6E-18 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PRINTS PR01607 Apyrase family signature 33 51 1.6E-18 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PRINTS PR01607 Apyrase family signature 265 288 1.6E-18 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PRINTS PR01607 Apyrase family signature 451 474 1.6E-18 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 PANTHER PTHR11575 1 683 8.2E-273 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 33 684 1.1E-270 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 Gene3D G3DSA:3.60.21.10 32 375 2.0E-87 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 SUPERFAMILY SSF55816 377 613 2.22E-29 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 SUPERFAMILY SSF56300 33 375 2.48E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 Gene3D G3DSA:3.90.780.10 377 633 1.2E-34 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS08150 65c615b88002df5ceee2198aa89680cd 684 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PANTHER PTHR30128:SF10 11 289 2.9E-65 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PANTHER PTHR30128 11 289 2.9E-65 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 Gene3D G3DSA:3.30.1330.60 180 286 1.4E-28 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 101 118 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 25 41 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 42 60 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 248 267 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 120 142 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 268 288 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 82 100 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 145 164 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 198 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 230 247 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 227 6.6E-58 T 22-04-2016 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 SUPERFAMILY SSF103088 159 285 4.58E-27 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 Pfam PF00691 OmpA family 184 279 4.7E-19 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01021 OMPA domain signature 215 230 4.4E-5 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10940 ec185b5998b7b893e1e2b0d7bd47213a 289 PRINTS PR01021 OMPA domain signature 230 246 4.4E-5 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 PIRSF PIRSF005917 1 280 1.2E-104 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 Gene3D G3DSA:3.40.1010.10 7 113 1.9E-11 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 SUPERFAMILY SSF53790 5 225 1.7E-82 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 PANTHER PTHR21091 5 217 8.1E-92 T 22-04-2016 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 PANTHER PTHR21091:SF18 5 217 8.1E-92 T 22-04-2016 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.433 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 Gene3D G3DSA:3.30.950.10 114 227 5.8E-44 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 2.9E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS17455 27f868d95998fac86843d827589e8c78 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 277 4.4E-99 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SAMA_RS06955 b64fdc7c39d0b1351da9edc4497dfb28 411 Pfam PF02687 FtsX-like permease family 279 404 4.4E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS06955 b64fdc7c39d0b1351da9edc4497dfb28 411 PANTHER PTHR30489:SF8 1 411 1.9E-175 T 22-04-2016 SAMA_RS06955 b64fdc7c39d0b1351da9edc4497dfb28 411 PANTHER PTHR30489 1 411 1.9E-175 T 22-04-2016 SAMA_RS06955 b64fdc7c39d0b1351da9edc4497dfb28 411 Pfam PF12704 MacB-like periplasmic core domain 27 243 3.6E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SAMA_RS06955 b64fdc7c39d0b1351da9edc4497dfb28 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 411 2.5E-133 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 PANTHER PTHR30578:SF1 10 404 1.6E-181 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 18 398 1.5E-121 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 PIRSF PIRSF016055 1 404 1.8E-180 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 Pfam PF03116 NQR2, RnfD, RnfE family 37 394 4.0E-97 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 402 29.595 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS15550 36b0bc247ec58447f2596c77d89981e0 404 PANTHER PTHR30578 10 404 1.6E-181 T 22-04-2016 SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 182 3.0E-56 T 22-04-2016 SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 Gene3D G3DSA:1.10.3210.10 2 192 6.1E-46 T 22-04-2016 IPR006674 HD domain SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 SMART SM00471 24 149 0.0046 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 Pfam PF13023 HD domain 9 157 3.1E-16 T 22-04-2016 IPR006674 HD domain SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 SUPERFAMILY SSF109604 1 182 2.2E-44 T 22-04-2016 SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 42.281 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 SAMA_RS08850 c3582f4f78e3484b63c6b60fe9c01265 195 PANTHER PTHR11845 1 188 2.5E-34 T 22-04-2016 SAMA_RS17440 30ee094689a6b8a6f59cd76feadba7f2 134 Gene3D G3DSA:1.20.120.550 5 124 1.1E-21 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain SAMA_RS17440 30ee094689a6b8a6f59cd76feadba7f2 134 PANTHER PTHR35814:SF2 1 125 5.4E-36 T 22-04-2016 SAMA_RS17440 30ee094689a6b8a6f59cd76feadba7f2 134 SUPERFAMILY SSF161084 3 126 7.46E-28 T 22-04-2016 SAMA_RS17440 30ee094689a6b8a6f59cd76feadba7f2 134 Pfam PF01124 MAPEG family 6 125 1.0E-26 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein SAMA_RS17440 30ee094689a6b8a6f59cd76feadba7f2 134 PANTHER PTHR35814 1 125 5.4E-36 T 22-04-2016 SAMA_RS04000 c060027f10c0d821905c274899cee68b 341 Gene3D G3DSA:1.10.3470.10 7 340 4.6E-93 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SAMA_RS04000 c060027f10c0d821905c274899cee68b 341 PANTHER PTHR30472:SF32 7 341 2.1E-109 T 22-04-2016 SAMA_RS04000 c060027f10c0d821905c274899cee68b 341 Pfam PF01032 FecCD transport family 20 335 2.3E-81 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SAMA_RS04000 c060027f10c0d821905c274899cee68b 341 PANTHER PTHR30472 7 341 2.1E-109 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SAMA_RS04000 c060027f10c0d821905c274899cee68b 341 SUPERFAMILY SSF81345 7 336 2.88E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SAMA_RS09140 c408449286b62f938929a373f19102e6 225 PANTHER PTHR12029 2 177 6.3E-51 T 22-04-2016 SAMA_RS09140 c408449286b62f938929a373f19102e6 225 Gene3D G3DSA:3.40.1280.10 1 152 1.0E-25 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS09140 c408449286b62f938929a373f19102e6 225 PIRSF PIRSF004808 1 225 5.5E-52 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS09140 c408449286b62f938929a373f19102e6 225 SUPERFAMILY SSF75217 2 152 2.49E-30 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS09140 c408449286b62f938929a373f19102e6 225 Pfam PF00588 SpoU rRNA Methylase family 2 150 1.1E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS09140 c408449286b62f938929a373f19102e6 225 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 194 8.0E-59 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS09140 c408449286b62f938929a373f19102e6 225 PANTHER PTHR12029:SF54 2 177 6.3E-51 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 PANTHER PTHR12143 21 778 0.0 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 PANTHER PTHR12143:SF22 21 778 0.0 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 33 762 3.9E-241 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 Gene3D G3DSA:1.20.1050.60 368 454 1.4E-32 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 Gene3D G3DSA:1.20.1610.10 463 621 8.6E-64 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 Pfam PF07971 Glycosyl hydrolase family 92 258 757 1.8E-170 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 Gene3D G3DSA:3.30.2080.10 622 768 4.5E-69 T 22-04-2016 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 Gene3D G3DSA:2.70.98.10 42 341 1.5E-100 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS01580 dc2ca310ea6157a2e20672e1da563980 782 SUPERFAMILY SSF48208 284 745 3.2E-40 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS09795 f6eae090d6cb06f197a66610b4e7a00c 666 Gene3D G3DSA:3.40.50.720 393 452 7.0E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09795 f6eae090d6cb06f197a66610b4e7a00c 666 PANTHER PTHR32507:SF0 1 634 2.6E-249 T 22-04-2016 SAMA_RS09795 f6eae090d6cb06f197a66610b4e7a00c 666 PANTHER PTHR32507 1 634 2.6E-249 T 22-04-2016 SAMA_RS09795 f6eae090d6cb06f197a66610b4e7a00c 666 Pfam PF00999 Sodium/hydrogen exchanger family 11 385 3.6E-36 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 1 233 51.592 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 PANTHER PTHR18895:SF73 22 223 1.5E-53 T 22-04-2016 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 Pfam PF05175 Methyltransferase small domain 35 115 1.9E-9 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 PANTHER PTHR18895 22 223 1.5E-53 T 22-04-2016 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 107 113 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 Gene3D G3DSA:3.40.50.150 22 227 4.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS14340 5ce46482160279e3af46b45740dc8fa1 233 SUPERFAMILY SSF53335 3 176 1.08E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12170 518e8ab09f0b97171469fcebf49fb529 391 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 22 108 8.5E-21 T 22-04-2016 IPR032370 Flagellar assembly protein T, N-terminal SAMA_RS12170 518e8ab09f0b97171469fcebf49fb529 391 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 309 385 6.6E-23 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal SAMA_RS12170 518e8ab09f0b97171469fcebf49fb529 391 Pfam PF16539 Flagellar assembly protein T, middle domain 113 265 1.7E-44 T 22-04-2016 IPR032386 Flagellar assembly protein T, middle domain SAMA_RS02490 155154a7c7f0f94471a548dadf11be60 282 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 30 2.4E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02490 155154a7c7f0f94471a548dadf11be60 282 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02490 155154a7c7f0f94471a548dadf11be60 282 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.0E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 SUPERFAMILY SSF52540 84 363 9.91E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 PANTHER PTHR24031 1 437 3.1E-258 T 22-04-2016 SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 SMART SM00487 28 234 2.2E-50 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.038 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.7E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 Pfam PF00271 Helicase conserved C-terminal domain 242 351 5.4E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 PANTHER PTHR24031:SF173 1 437 3.1E-258 T 22-04-2016 SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 Gene3D G3DSA:3.40.50.300 224 384 1.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 Gene3D G3DSA:3.40.50.300 8 223 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16745 23c7144f35549f25f958de55eed221a1 439 SMART SM00490 270 351 1.3E-30 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 SUPERFAMILY SSF52922 704 897 2.44E-55 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 Gene3D G3DSA:3.40.50.970 478 707 1.2E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 SUPERFAMILY SSF52518 479 703 4.83E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 897 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PIRSF PIRSF000156 1 898 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624:SF67 364 453 0.0 T 22-04-2016 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624:SF67 76 295 0.0 T 22-04-2016 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624:SF67 483 538 0.0 T 22-04-2016 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624:SF67 556 779 0.0 T 22-04-2016 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624:SF67 798 880 0.0 T 22-04-2016 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624 364 453 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624 76 295 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624 483 538 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624 556 779 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 PANTHER PTHR11624 798 880 0.0 T 22-04-2016 IPR033247 Transketolase family SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 Gene3D G3DSA:3.40.50.920 709 897 4.0E-70 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 SUPERFAMILY SSF52518 59 472 1.93E-140 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 Gene3D G3DSA:3.40.50.970 58 472 1.3E-154 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 363 429 8.6E-5 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS02040 5b8ead16d3bfea000ea6a7851e2917f5 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 2.3E-10 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 Pfam PF03315 Serine dehydratase beta chain 3 155 1.9E-57 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 PANTHER PTHR30182 1 456 1.0E-240 T 22-04-2016 SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 Pfam PF03313 Serine dehydratase alpha chain 188 452 4.0E-102 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 SUPERFAMILY SSF143548 16 157 2.48E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 Gene3D G3DSA:3.30.1330.90 10 157 1.6E-53 T 22-04-2016 IPR029009 Allosteric substrate binding domain SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 455 5.5E-214 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SAMA_RS06920 3043e4566d0d062ea4cc507a55c0f620 458 PANTHER PTHR30182:SF1 1 456 1.0E-240 T 22-04-2016 SAMA_RS02905 ce4cce31a382246df51f276372e646f0 355 SUPERFAMILY SSF56935 27 355 5.19E-51 T 22-04-2016 SAMA_RS02905 ce4cce31a382246df51f276372e646f0 355 Pfam PF13609 Gram-negative porin 9 332 5.8E-47 T 22-04-2016 SAMA_RS02905 ce4cce31a382246df51f276372e646f0 355 Gene3D G3DSA:2.40.160.10 28 355 8.1E-46 T 22-04-2016 IPR023614 Porin domain SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 Gene3D G3DSA:1.20.1250.20 245 456 8.5E-12 T 22-04-2016 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 Gene3D G3DSA:1.20.1250.20 16 213 4.4E-17 T 22-04-2016 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 237 456 7.7E-48 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 231 1.0E-59 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 PANTHER PTHR11654 1 488 6.6E-193 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 Pfam PF00854 POT family 90 211 1.2E-26 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 Pfam PF00854 POT family 244 417 3.7E-33 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 SUPERFAMILY SSF103473 11 452 2.35E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS11870 a033dad732517d8b3b23fb28a43b9e14 490 PANTHER PTHR11654:SF119 1 488 6.6E-193 T 22-04-2016 SAMA_RS04960 e32f8508c39eceaed9587b1507687626 181 PANTHER PTHR30529:SF5 1 180 1.2E-59 T 22-04-2016 SAMA_RS04960 e32f8508c39eceaed9587b1507687626 181 Gene3D G3DSA:1.20.950.20 88 168 1.5E-4 T 22-04-2016 SAMA_RS04960 e32f8508c39eceaed9587b1507687626 181 PANTHER PTHR30529 1 180 1.2E-59 T 22-04-2016 SAMA_RS04960 e32f8508c39eceaed9587b1507687626 181 SUPERFAMILY SSF81342 4 176 3.3E-32 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS04960 e32f8508c39eceaed9587b1507687626 181 Pfam PF01292 Prokaryotic cytochrome b561 9 176 1.0E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.443 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 SUPERFAMILY SSF54565 1 76 8.76E-30 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 PANTHER PTHR12919 1 78 2.0E-41 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 Gene3D G3DSA:3.30.1320.10 1 78 4.6E-34 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.8E-30 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS04645 94bd5ef7a8faf595081eb8f6fbe1c2c0 83 Pfam PF00886 Ribosomal protein S16 8 68 6.2E-25 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 10 390 5.5E-155 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 Gene3D G3DSA:3.90.1150.10 259 388 1.2E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 388 7.9E-112 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 SUPERFAMILY SSF53383 26 388 3.09E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 Gene3D G3DSA:3.40.640.10 9 258 4.3E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 PIRSF PIRSF001434 1 392 2.8E-126 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 PANTHER PTHR11808 5 393 1.3E-248 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS10480 06d6d1a634a62c1f1a97f6d2bbc20d1f 401 PANTHER PTHR11808:SF45 5 393 1.3E-248 T 22-04-2016 SAMA_RS11850 aac6e4673c11ef8b7b4d65f1bda11be4 327 PANTHER PTHR32309:SF14 3 249 4.6E-36 T 22-04-2016 SAMA_RS11850 aac6e4673c11ef8b7b4d65f1bda11be4 327 PANTHER PTHR32309 3 249 4.6E-36 T 22-04-2016 SAMA_RS11850 aac6e4673c11ef8b7b4d65f1bda11be4 327 Pfam PF13807 G-rich domain on putative tyrosine kinase 283 321 8.2E-9 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain SAMA_RS11850 aac6e4673c11ef8b7b4d65f1bda11be4 327 Pfam PF02706 Chain length determinant protein 27 221 1.5E-28 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SAMA_RS12435 da1a6583a203641065a1c7fd16c1acbb 156 Gene3D G3DSA:3.10.450.50 24 130 2.6E-4 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS12435 da1a6583a203641065a1c7fd16c1acbb 156 Pfam PF13474 SnoaL-like domain 28 135 1.7E-28 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SAMA_RS12435 da1a6583a203641065a1c7fd16c1acbb 156 SUPERFAMILY SSF54427 22 135 1.43E-17 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Pfam PF00108 Thiolase, N-terminal domain 5 254 7.8E-80 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Gene3D G3DSA:3.40.47.10 143 183 3.3E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Gene3D G3DSA:3.40.47.10 268 386 3.3E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.869 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Gene3D G3DSA:3.40.47.10 4 126 3.2E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Gene3D G3DSA:3.40.47.10 184 267 3.2E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 1.2E-220 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 PANTHER PTHR18919 1 387 1.9E-200 T 22-04-2016 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 PANTHER PTHR18919:SF69 1 387 1.9E-200 T 22-04-2016 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 SUPERFAMILY SSF53901 263 386 1.12E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.8E-137 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 PIRSF PIRSF000429 1 387 2.7E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 5.7E-48 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 SUPERFAMILY SSF53901 1 258 3.26E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS00145 f6de3b27742b9d9f83880135898921f0 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 SUPERFAMILY SSF50249 3 68 7.05E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 PANTHER PTHR11544 1 69 1.2E-39 T 22-04-2016 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 PIRSF PIRSF002599 1 69 2.6E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 Gene3D G3DSA:2.40.50.140 4 67 2.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 22-04-2016 IPR019844 Cold-shock conserved site SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 67 9.4E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 SMART SM00357 5 68 4.4E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 PRINTS PR00050 Cold shock protein signature 26 35 2.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 PRINTS PR00050 Cold shock protein signature 6 21 2.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10290 f3a7d65f896e5910c3b746a9ec086794 69 PRINTS PR00050 Cold shock protein signature 41 59 2.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 SUPERFAMILY SSF111038 1 139 2.09E-45 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 2.0E-35 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 139 5.0E-41 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 PIRSF PIRSF004681 1 139 1.6E-42 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 Gene3D G3DSA:2.60.120.460 1 139 7.5E-54 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 PANTHER PTHR30615 1 139 7.8E-75 T 22-04-2016 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 SAMA_RS08695 ff525847e17c9e5dd5032656df860278 139 PANTHER PTHR30615:SF5 1 139 7.8E-75 T 22-04-2016 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PANTHER PTHR22778:SF16 1 159 2.3E-46 T 22-04-2016 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 Pfam PF00186 Dihydrofolate reductase 3 156 9.0E-61 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 Gene3D G3DSA:3.40.430.10 1 159 1.5E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PANTHER PTHR22778 1 159 2.3E-46 T 22-04-2016 SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 SUPERFAMILY SSF53597 2 159 4.71E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SAMA_RS14755 ef89c20d0caf834dd46f538c090782a2 160 PIRSF PIRSF000194 1 160 6.4E-65 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 Pfam PF01564 Spermine/spermidine synthase 12 240 8.6E-77 T 22-04-2016 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 PANTHER PTHR11558 7 283 5.8E-112 T 22-04-2016 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 Gene3D G3DSA:3.40.50.150 57 284 4.7E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 TIGRFAM TIGR00417 speE: spermidine synthase 8 278 2.2E-103 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 Gene3D G3DSA:2.30.140.10 4 56 2.7E-15 T 22-04-2016 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.38 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SAMA_RS10265 4d5763c19c6d8c9ba74040556e7aac22 291 SUPERFAMILY SSF53335 6 283 1.59E-85 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10000 0a25c4f61d199425b22c09412f90451b 372 Pfam PF01594 Domain of unknown function DUF20 20 346 1.3E-71 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SAMA_RS10000 0a25c4f61d199425b22c09412f90451b 372 PANTHER PTHR21716 1 348 9.6E-138 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SAMA_RS10000 0a25c4f61d199425b22c09412f90451b 372 PANTHER PTHR21716:SF19 1 348 9.6E-138 T 22-04-2016 SAMA_RS03065 9ffb3cf60b6d6d4b74adb05813543543 242 SUPERFAMILY SSF54060 23 230 7.3E-85 T 22-04-2016 SAMA_RS03065 9ffb3cf60b6d6d4b74adb05813543543 242 Pfam PF04231 Endonuclease I 59 229 6.5E-44 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 SAMA_RS03065 9ffb3cf60b6d6d4b74adb05813543543 242 PANTHER PTHR33607 26 227 2.3E-43 T 22-04-2016 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 3.3E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 SUPERFAMILY SSF56645 6 237 4.32E-77 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Gene3D G3DSA:2.40.110.10 134 225 5.3E-33 T 22-04-2016 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 PANTHER PTHR10909:SF307 1 390 1.6E-267 T 22-04-2016 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 225 8.7E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 PANTHER PTHR10909 1 390 1.6E-267 T 22-04-2016 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 383 1.6E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 SUPERFAMILY SSF47203 241 388 5.64E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Gene3D G3DSA:1.20.140.10 226 386 1.6E-38 T 22-04-2016 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SAMA_RS14615 504510589b5a5cd2d84416b0c6541f4e 391 Gene3D G3DSA:1.10.540.10 4 133 9.8E-44 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 320 5.0E-148 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.4E-159 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.688 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 PANTHER PTHR10108 48 324 8.3E-142 T 22-04-2016 SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 PANTHER PTHR10108:SF847 48 324 8.3E-142 T 22-04-2016 SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 SUPERFAMILY SSF53335 91 323 8.06E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09665 3aa04c941bac1cc8a29f3d95fb5aab49 330 Gene3D G3DSA:3.40.50.150 111 307 1.1E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS14905 e18993609f522c1a45e7795683ae0b23 127 Gene3D G3DSA:3.40.50.10600 2 125 1.2E-41 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS14905 e18993609f522c1a45e7795683ae0b23 127 SUPERFAMILY SSF52091 1 125 2.35E-38 T 22-04-2016 IPR002645 STAS domain SAMA_RS14905 e18993609f522c1a45e7795683ae0b23 127 Pfam PF11964 SpoIIAA-like 22 125 3.7E-21 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS16065 99b53315d275e80957ec5ad49bea7766 156 Pfam PF02470 MlaD protein 39 117 1.6E-18 T 22-04-2016 IPR003399 Mce/MlaD SAMA_RS16065 99b53315d275e80957ec5ad49bea7766 156 PANTHER PTHR33371 1 152 1.6E-46 T 22-04-2016 SAMA_RS16065 99b53315d275e80957ec5ad49bea7766 156 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 151 1.3E-55 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 SAMA_RS03075 ab221c648e86f90780e206400bdbd42a 385 SUPERFAMILY SSF53182 145 381 3.66E-32 T 22-04-2016 SAMA_RS03075 ab221c648e86f90780e206400bdbd42a 385 Gene3D G3DSA:3.40.630.20 144 380 1.7E-19 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SAMA_RS14295 eedcfe288230ca920182ef1de1572a20 189 SUPERFAMILY SSF52218 1 187 1.68E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14295 eedcfe288230ca920182ef1de1572a20 189 Gene3D G3DSA:3.40.50.360 1 185 1.8E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS14295 eedcfe288230ca920182ef1de1572a20 189 PANTHER PTHR10204:SF40 2 154 5.8E-29 T 22-04-2016 SAMA_RS14295 eedcfe288230ca920182ef1de1572a20 189 PANTHER PTHR10204 2 154 5.8E-29 T 22-04-2016 SAMA_RS14295 eedcfe288230ca920182ef1de1572a20 189 Pfam PF02525 Flavodoxin-like fold 2 179 8.4E-33 T 22-04-2016 IPR003680 Flavodoxin-like fold SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 Gene3D G3DSA:1.10.10.10 1 62 3.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 PANTHER PTHR30363 1 110 6.0E-58 T 22-04-2016 SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 Pfam PF13280 WYL domain 134 226 2.0E-18 T 22-04-2016 IPR026881 WYL domain SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 Pfam PF08279 HTH domain 6 58 3.2E-17 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 PANTHER PTHR30363:SF7 1 110 6.0E-58 T 22-04-2016 SAMA_RS06240 c84a249a5a8c6e3381dfae10c831b074 235 SUPERFAMILY SSF46785 1 61 1.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 Gene3D G3DSA:1.10.1060.10 106 233 1.2E-46 T 22-04-2016 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 227 8.3E-87 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 SUPERFAMILY SSF54292 1 104 8.19E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 PANTHER PTHR11921:SF29 4 233 2.6E-135 T 22-04-2016 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 Gene3D G3DSA:3.10.20.30 1 104 5.3E-40 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 2.6E-9 T 22-04-2016 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 6.4E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 PANTHER PTHR11921 4 233 2.6E-135 T 22-04-2016 SAMA_RS07425 da386ea8187a3f9d5f41107c6d75a9ff 235 SUPERFAMILY SSF46548 106 232 2.27E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 PANTHER PTHR30006:SF5 4 242 7.0E-73 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 Gene3D G3DSA:3.40.190.10 27 163 2.0E-24 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 Gene3D G3DSA:3.40.190.10 164 191 3.5E-5 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 Gene3D G3DSA:3.40.190.10 5 25 3.5E-5 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 SUPERFAMILY SSF53850 8 188 9.51E-35 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 Pfam PF13343 Bacterial extracellular solute-binding protein 12 189 3.1E-19 T 22-04-2016 SAMA_RS16875 8423d917f833bf3a33e60987e254ead1 318 PANTHER PTHR30006 4 242 7.0E-73 T 22-04-2016 SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 540 53.689 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 Pfam PF03109 ABC1 family 112 231 6.8E-33 T 22-04-2016 IPR004147 UbiB domain SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 SUPERFAMILY SSF56112 94 158 2.92E-45 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 SUPERFAMILY SSF56112 193 436 2.92E-45 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 445 4.3E-169 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 PANTHER PTHR10566:SF79 6 458 2.8E-267 T 22-04-2016 SAMA_RS16690 ef64c292c8413cd510ee37ecb1e8ce36 549 PANTHER PTHR10566 6 458 2.8E-267 T 22-04-2016 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 SUPERFAMILY SSF88946 13 119 2.55E-27 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 Pfam PF08281 Sigma-70, region 4 128 178 3.3E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 Gene3D G3DSA:1.10.10.10 125 183 7.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 183 1.7E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 Gene3D G3DSA:1.10.1740.10 13 124 1.4E-29 T 22-04-2016 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 PANTHER PTHR30173:SF21 7 184 1.2E-51 T 22-04-2016 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 PANTHER PTHR30173 7 184 1.2E-51 T 22-04-2016 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 Pfam PF04542 Sigma-70 region 2 36 103 2.7E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS13685 3c7cf5c87961b21a75e8d15b7816b633 184 SUPERFAMILY SSF88659 124 183 9.16E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 Gene3D G3DSA:3.30.300.20 1 129 4.3E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 Pfam PF02566 OsmC-like protein 32 126 1.6E-9 T 22-04-2016 IPR003718 OsmC/Ohr family SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 SUPERFAMILY SSF82784 1 128 1.44E-19 T 22-04-2016 IPR003718 OsmC/Ohr family SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 PANTHER PTHR39624 11 142 2.3E-17 T 22-04-2016 SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 546 6.9E-101 T 22-04-2016 IPR003776 YcaO-like domain SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 723 0.0 T 22-04-2016 IPR019938 YcaO domain protein SAMA_RS18545 455a4a968f4682ca4fff3c9edfa28040 727 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 535 2.6E-70 T 22-04-2016 IPR003776 YcaO-like domain SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 SUPERFAMILY SSF52540 393 495 5.83E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Gene3D G3DSA:3.40.50.300 197 382 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Pfam PF00271 Helicase conserved C-terminal domain 495 590 5.5E-6 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 PANTHER PTHR30580 1 731 3.2E-267 T 22-04-2016 SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 SUPERFAMILY SSF52540 524 615 5.83E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 SUPERFAMILY SSF52540 199 380 1.58E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 730 24.022 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 SMART SM00487 198 392 1.4E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Gene3D G3DSA:3.40.50.300 491 634 1.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Gene3D G3DSA:3.40.50.300 405 430 1.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 TIGRFAM TIGR00595 priA: primosomal protein N' 223 727 9.0E-180 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 SMART SM00490 494 591 5.8E-10 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02395 6836d59eef483591a8d274e56ae0eecc 731 Pfam PF00270 DEAD/DEAH box helicase 212 367 8.5E-13 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PANTHER PTHR11071 1 162 1.1E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PIRSF PIRSF001467 1 163 2.8E-27 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 SUPERFAMILY SSF50891 1 162 3.07E-58 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PANTHER PTHR11071:SF192 1 162 1.1E-71 T 22-04-2016 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.19E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.19E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.19E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 Gene3D G3DSA:2.40.100.10 2 162 4.0E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS06385 2e84c22e13cc1464206e8be32249651e 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 1.2E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 PIRSF PIRSF001361 1 353 2.0E-157 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 Gene3D G3DSA:3.20.20.70 10 349 3.1E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 Pfam PF00793 DAHP synthetase I family 45 340 1.5E-100 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 PANTHER PTHR21225 1 363 1.6E-215 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 SUPERFAMILY SSF51569 8 346 8.43E-134 T 22-04-2016 SAMA_RS04665 dfa758614a5f8bffff0f7652659dd19e 363 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 9.6E-153 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 SMART SM00267 127 298 3.9E-35 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 294 8.4E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 295 7.8E-35 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 Gene3D G3DSA:3.30.70.270 140 300 2.8E-46 T 22-04-2016 SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 PANTHER PTHR10799:SF710 98 299 1.2E-20 T 22-04-2016 SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 PANTHER PTHR10799 98 299 1.2E-20 T 22-04-2016 SAMA_RS13205 1fc04b0c1730573259626dcb560360d9 319 SUPERFAMILY SSF55073 143 299 6.36E-39 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 PANTHER PTHR33121:SF13 7 17 2.5E-44 T 22-04-2016 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 PANTHER PTHR33121:SF13 104 412 2.5E-44 T 22-04-2016 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 Pfam PF00072 Response regulator receiver domain 7 124 2.5E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 SMART SM00448 5 124 3.8E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 SMART SM00052 138 385 1.3E-46 T 22-04-2016 IPR001633 EAL domain SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 SUPERFAMILY SSF141868 145 394 3.01E-61 T 22-04-2016 IPR001633 EAL domain SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 Pfam PF00563 EAL domain 144 380 6.6E-58 T 22-04-2016 IPR001633 EAL domain SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 SUPERFAMILY SSF52172 6 147 1.71E-23 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 PANTHER PTHR33121 7 17 2.5E-44 T 22-04-2016 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 PANTHER PTHR33121 104 412 2.5E-44 T 22-04-2016 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 Gene3D G3DSA:3.40.50.2300 5 131 8.0E-22 T 22-04-2016 SAMA_RS13480 a8b255962e5b7fabc051cc145b6b5787 413 Gene3D G3DSA:3.20.20.450 144 393 4.5E-62 T 22-04-2016 IPR001633 EAL domain SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 PANTHER PTHR10799 301 561 1.2E-30 T 22-04-2016 SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 SUPERFAMILY SSF55073 411 562 4.16E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 Gene3D G3DSA:3.30.70.270 408 562 2.1E-48 T 22-04-2016 SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 Pfam PF07696 7TMR-DISM extracellular 2 50 182 9.7E-35 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 Pfam PF07695 7TM diverse intracellular signalling 194 398 3.1E-47 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 SMART SM00267 395 564 1.4E-59 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 PANTHER PTHR10799:SF750 301 561 1.2E-30 T 22-04-2016 SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 404 562 7.1E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS14990 f8af4708c10a58636fead11dad47baf4 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 407 559 1.7E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19190 498d4af1eab31433a51c63333a1280d6 183 SUPERFAMILY SSF55729 1 74 2.88E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19190 498d4af1eab31433a51c63333a1280d6 183 SUPERFAMILY SSF55729 105 169 2.88E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19190 498d4af1eab31433a51c63333a1280d6 183 Pfam PF00583 Acetyltransferase (GNAT) family 101 163 1.4E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS19190 498d4af1eab31433a51c63333a1280d6 183 Gene3D G3DSA:3.40.630.30 101 159 3.1E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19190 498d4af1eab31433a51c63333a1280d6 183 Gene3D G3DSA:3.40.630.30 1 69 3.1E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 Pfam PF06426 Serine acetyltransferase, N-terminal 4 37 1.1E-4 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 SUPERFAMILY SSF51161 5 174 1.04E-55 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 Gene3D G3DSA:2.160.10.10 63 187 4.4E-37 T 22-04-2016 SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 Gene3D G3DSA:1.10.3130.10 3 62 1.6E-27 T 22-04-2016 SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 PANTHER PTHR23416 3 238 6.1E-100 T 22-04-2016 SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 PANTHER PTHR23416:SF55 3 238 6.1E-100 T 22-04-2016 SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 3.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 110 5.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06760 d6641d8ee67804edcddec784b05fb53b 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 168 9.8E-78 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 PANTHER PTHR11732 1 296 2.8E-130 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 SUPERFAMILY SSF51430 3 293 1.83E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 PRINTS PR00069 Aldo-keto reductase signature 108 126 1.9E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 PRINTS PR00069 Aldo-keto reductase signature 139 156 1.9E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 Gene3D G3DSA:3.20.20.100 3 291 1.1E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 Pfam PF00248 Aldo/keto reductase family 12 286 5.7E-53 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS16405 b58f9c67128dca6103359ff3b71cfff7 296 PANTHER PTHR11732:SF10 1 296 2.8E-130 T 22-04-2016 SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 SUPERFAMILY SSF75169 1 129 4.51E-35 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 Gene3D G3DSA:3.40.1260.10 1 129 1.5E-22 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 PANTHER PTHR34874 2 129 8.1E-50 T 22-04-2016 SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 PANTHER PTHR34874:SF1 2 129 8.1E-50 T 22-04-2016 SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 4.4E-47 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 SAMA_RS09285 1eb854a4ee735f1966e5a4ef4e9fd1b0 129 Pfam PF02635 DsrE/DsrF-like family 5 129 5.3E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 SUPERFAMILY SSF53822 78 339 9.79E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 PANTHER PTHR30146 4 338 2.3E-220 T 22-04-2016 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 Gene3D G3DSA:1.10.260.40 6 56 3.0E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 Gene3D G3DSA:3.40.50.2300 57 181 1.9E-23 T 22-04-2016 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 49 1.9E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 SUPERFAMILY SSF47413 4 62 3.75E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 PANTHER PTHR30146:SF51 4 338 2.3E-220 T 22-04-2016 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 Pfam PF13377 Periplasmic binding protein-like domain 178 338 4.0E-35 T 22-04-2016 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 Gene3D G3DSA:3.40.50.2300 182 321 6.7E-48 T 22-04-2016 SAMA_RS08645 ac1516796ab1319f66fedc237ae64699 344 SMART SM00354 4 74 1.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 Gene3D G3DSA:3.40.309.10 268 451 3.7E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 474 1.3E-222 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 PANTHER PTHR11699 2 479 1.5E-294 T 22-04-2016 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 SUPERFAMILY SSF53720 6 478 4.19E-176 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 Gene3D G3DSA:3.40.605.10 9 267 5.2E-106 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 PANTHER PTHR11699:SF49 2 479 1.5E-294 T 22-04-2016 SAMA_RS13815 0c630634e818bfdf6e0019722b6805ad 480 Pfam PF00171 Aldehyde dehydrogenase family 19 475 3.4E-168 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 PANTHER PTHR11695:SF557 24 348 1.1E-178 T 22-04-2016 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 Gene3D G3DSA:3.40.50.720 142 308 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 Gene3D G3DSA:3.90.180.10 3 141 2.7E-52 T 22-04-2016 IPR011032 GroES-like SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 SMART SM00829 20 338 7.5E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 3.7E-40 T 22-04-2016 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 PANTHER PTHR11695 24 348 1.1E-178 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 SUPERFAMILY SSF51735 125 305 2.18E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 Pfam PF00107 Zinc-binding dehydrogenase 160 298 4.2E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SAMA_RS02550 583642c821e34937e9adf1b2bef1ab9e 348 SUPERFAMILY SSF50129 5 144 3.89E-42 T 22-04-2016 IPR011032 GroES-like SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 PANTHER PTHR30400 1 231 9.3E-90 T 22-04-2016 SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 223 2.5E-72 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 4 225 40.238 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 Pfam PF00912 Transglycosylase 55 219 3.0E-49 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 SUPERFAMILY SSF53955 53 228 8.44E-59 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 PANTHER PTHR30400:SF0 1 231 9.3E-90 T 22-04-2016 SAMA_RS03890 03a2c2f1bdd4372877b61ae89ebfc67f 231 Gene3D G3DSA:1.10.3810.10 54 228 1.4E-58 T 22-04-2016 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 PANTHER PTHR11699:SF188 1 495 1.4E-300 T 22-04-2016 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 Pfam PF00171 Aldehyde dehydrogenase family 16 476 5.1E-142 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 SUPERFAMILY SSF53720 3 481 4.84E-150 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 PANTHER PTHR11699 1 495 1.4E-300 T 22-04-2016 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 Gene3D G3DSA:3.40.309.10 260 441 7.3E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 480 2.3E-206 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 SAMA_RS13885 0980d98e4c6eefb8597e5dfd9240d7f9 496 Gene3D G3DSA:3.40.605.10 3 259 1.7E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 28 439 2.0E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 Gene3D G3DSA:3.40.50.300 127 409 7.0E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 352 361 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 440 1.8E-171 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 PANTHER PTHR15184 5 436 8.6E-231 T 22-04-2016 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 SUPERFAMILY SSF52540 97 367 2.0E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 361 2.7E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 SMART SM00382 162 345 5.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS12010 1e35c4d56c7d7d767c52a2f4585cb396 446 PANTHER PTHR15184:SF9 5 436 8.6E-231 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SAMA_RS14005 7918e737ed75add2b4c183341c776783 226 SUPERFAMILY SSF109755 30 209 4.53E-14 T 22-04-2016 SAMA_RS14005 7918e737ed75add2b4c183341c776783 226 PANTHER PTHR36536 1 226 1.5E-125 T 22-04-2016 SAMA_RS14005 7918e737ed75add2b4c183341c776783 226 PANTHER PTHR36536:SF3 1 226 1.5E-125 T 22-04-2016 SAMA_RS14005 7918e737ed75add2b4c183341c776783 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 1.7E-63 T 22-04-2016 IPR002727 Protein of unknown function DUF47 SAMA_RS14005 7918e737ed75add2b4c183341c776783 226 Pfam PF01865 Protein of unknown function DUF47 7 224 6.9E-62 T 22-04-2016 IPR018445 Putative phosphate transport regulator SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 Pfam PF00149 Calcineurin-like phosphoesterase 5 133 3.8E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 SUPERFAMILY SSF56300 1 258 1.12E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 267 5.2E-97 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 PANTHER PTHR24032:SF27 1 266 1.3E-122 T 22-04-2016 SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 Gene3D G3DSA:3.60.21.10 2 132 1.5E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 Gene3D G3DSA:3.60.21.10 166 267 1.5E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 PIRSF PIRSF000903 1 270 2.6E-100 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SAMA_RS14740 5f571b88ed36fd80923b7cb336d1d407 270 PANTHER PTHR24032 1 266 1.3E-122 T 22-04-2016 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 PANTHER PTHR11079:SF73 4 323 1.9E-147 T 22-04-2016 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 PANTHER PTHR11079 4 323 1.9E-147 T 22-04-2016 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.1E-100 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 Gene3D G3DSA:3.10.290.10 17 68 6.8E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 Pfam PF01479 S4 domain 19 65 5.1E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 SMART SM00363 18 81 2.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 Pfam PF00849 RNA pseudouridylate synthase 92 242 7.4E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 SUPERFAMILY SSF55174 17 68 1.61E-10 T 22-04-2016 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 SUPERFAMILY SSF55120 79 317 6.78E-78 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS13635 e2d0152cf2a8fe5d55fcee64196181d1 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 Pfam PF01750 Hydrogenase maturation protease 20 150 3.1E-27 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PRINTS PR00446 Hydrogen uptake protein signature 71 87 2.4E-16 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PRINTS PR00446 Hydrogen uptake protein signature 59 69 2.4E-16 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PRINTS PR00446 Hydrogen uptake protein signature 38 55 2.4E-16 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.4E-16 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.4E-16 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PANTHER PTHR30302:SF1 1 167 1.3E-50 T 22-04-2016 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 151 2.7E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 Gene3D G3DSA:3.40.50.1450 1 164 4.9E-50 T 22-04-2016 IPR023430 Peptidase HybD-like domain SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 PANTHER PTHR30302 1 167 1.3E-50 T 22-04-2016 SAMA_RS08750 2d1538d665bf1f2120ed77b0fc6dde1d 185 SUPERFAMILY SSF53163 1 162 1.86E-40 T 22-04-2016 IPR023430 Peptidase HybD-like domain SAMA_RS07230 e6f1104b25eb5a154c057a215730fcc2 126 Gene3D G3DSA:3.10.180.10 6 126 1.9E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS07230 e6f1104b25eb5a154c057a215730fcc2 126 SUPERFAMILY SSF54593 4 125 8.46E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS07230 e6f1104b25eb5a154c057a215730fcc2 126 PANTHER PTHR33993:SF4 1 126 2.6E-47 T 22-04-2016 SAMA_RS07230 e6f1104b25eb5a154c057a215730fcc2 126 PANTHER PTHR33993 1 126 2.6E-47 T 22-04-2016 SAMA_RS08170 3b97ef5dd0d1f13acde28eec513e77b7 206 PIRSF PIRSF006324 1 206 3.1E-43 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08170 3b97ef5dd0d1f13acde28eec513e77b7 206 Pfam PF01810 LysE type translocator 16 203 3.3E-23 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08170 3b97ef5dd0d1f13acde28eec513e77b7 206 PANTHER PTHR30086 2 203 5.5E-117 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08170 3b97ef5dd0d1f13acde28eec513e77b7 206 PANTHER PTHR30086:SF5 2 203 5.5E-117 T 22-04-2016 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PANTHER PTHR24423:SF451 351 589 2.6E-83 T 22-04-2016 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PANTHER PTHR24423:SF451 87 185 2.6E-83 T 22-04-2016 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 441 1.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Gene3D G3DSA:1.10.287.130 376 438 2.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 590 2.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Pfam PF02743 Cache domain 45 229 6.4E-13 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 SUPERFAMILY SSF47384 368 442 1.02E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PIRSF PIRSF036431 1 597 3.2E-172 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 SMART SM00387 484 592 8.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 SUPERFAMILY SSF103190 58 191 2.75E-24 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PANTHER PTHR24423 351 589 2.6E-83 T 22-04-2016 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PANTHER PTHR24423 87 185 2.6E-83 T 22-04-2016 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 SUPERFAMILY SSF55874 437 593 2.62E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Gene3D G3DSA:3.30.565.10 448 590 1.6E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 SMART SM00388 374 442 3.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 550 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS11605 145468b0c8bf2ee1721d3aa4920b6c96 600 Gene3D G3DSA:3.30.450.20 97 182 4.9E-5 T 22-04-2016 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 585 1.2E-199 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SUPERFAMILY SSF46600 186 239 8.5E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 538 2.4E-46 T 22-04-2016 IPR001162 UvrC family homology region SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Pfam PF02151 UvrB/uvrC motif 201 234 3.0E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SUPERFAMILY SSF82771 14 97 1.7E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 PANTHER PTHR30562:SF1 5 604 8.7E-277 T 22-04-2016 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SMART SM00465 14 95 2.7E-21 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SMART SM00278 552 571 0.28 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SMART SM00278 584 603 2.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Pfam PF14520 Helix-hairpin-helix domain 553 605 1.7E-10 T 22-04-2016 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Gene3D G3DSA:3.40.1440.10 15 94 5.9E-11 T 22-04-2016 IPR027299 GIY-YIG domain SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Gene3D G3DSA:1.10.150.20 551 605 3.8E-23 T 22-04-2016 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 SUPERFAMILY SSF47781 517 605 3.81E-22 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 603 27.954 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Gene3D G3DSA:4.10.860.10 178 239 9.1E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 Pfam PF01541 GIY-YIG catalytic domain 15 90 5.4E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SAMA_RS08390 3bbf23d1eadd2a1796eaa769bac3f465 606 PANTHER PTHR30562 5 604 8.7E-277 T 22-04-2016 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 SUPERFAMILY SSF55021 296 394 9.16E-18 T 22-04-2016 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 PIRSF PIRSF000726 1 452 7.1E-140 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 449 4.6E-131 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 PANTHER PTHR21499 1 452 3.9E-148 T 22-04-2016 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 SUPERFAMILY SSF53633 3 292 3.93E-78 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 PANTHER PTHR21499:SF3 1 452 3.9E-148 T 22-04-2016 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 449 1.1E-134 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 SUPERFAMILY SSF55021 376 450 6.87E-18 T 22-04-2016 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 Gene3D G3DSA:3.40.1160.10 103 292 2.4E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 Gene3D G3DSA:3.40.1160.10 1 49 2.4E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS03205 bf58aa69ca4581019940f72200aa0db4 452 Pfam PF00696 Amino acid kinase family 3 277 1.1E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 SUPERFAMILY SSF75471 1 95 4.97E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 Gene3D G3DSA:3.30.110.60 1 95 2.4E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.3E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 8.2E-37 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 PANTHER PTHR31846 1 98 2.3E-38 T 22-04-2016 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 7.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SAMA_RS04975 d4a3d565871efa5ab7c3baa895ad4b98 99 SMART SM01103 3 86 2.2E-40 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 Pfam PF01274 Malate synthase 28 543 3.8E-192 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 PIRSF PIRSF001363 11 545 1.7E-244 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 33 543 5.9E-243 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 PANTHER PTHR21631 6 548 2.5E-274 T 22-04-2016 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 Gene3D G3DSA:1.20.1220.12 425 537 6.1E-36 T 22-04-2016 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 PANTHER PTHR21631:SF1 6 548 2.5E-274 T 22-04-2016 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 Gene3D G3DSA:3.20.20.360 82 424 2.1E-117 T 22-04-2016 SAMA_RS12450 a0ba57bd2cc51a72a3c97b8dfc08519f 548 SUPERFAMILY SSF51645 22 544 1.31E-185 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 Gene3D G3DSA:1.20.1050.40 65 196 3.6E-21 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 SUPERFAMILY SSF55486 61 728 8.63E-191 T 22-04-2016 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 Gene3D G3DSA:1.10.1370.10 198 403 5.2E-124 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 Gene3D G3DSA:1.10.1370.10 557 729 5.2E-124 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 PANTHER PTHR11804 50 730 0.0 T 22-04-2016 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 Pfam PF01432 Peptidase family M3 280 728 4.9E-135 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 Gene3D G3DSA:3.40.390.10 413 556 1.0E-50 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS08155 2245eae22c4a33ebc62a5b4a203ffc27 730 PANTHER PTHR11804:SF47 50 730 0.0 T 22-04-2016 SAMA_RS16165 a5b148c36629b41fc3e199c326f22af5 230 Gene3D G3DSA:3.40.50.150 7 228 4.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16165 a5b148c36629b41fc3e199c326f22af5 230 PANTHER PTHR39963 1 228 7.7E-26 T 22-04-2016 SAMA_RS16165 a5b148c36629b41fc3e199c326f22af5 230 SUPERFAMILY SSF53335 39 97 9.35E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16165 a5b148c36629b41fc3e199c326f22af5 230 SUPERFAMILY SSF53335 131 222 9.35E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16165 a5b148c36629b41fc3e199c326f22af5 230 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 153 228 9.3E-20 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 PANTHER PTHR10683 1 316 4.5E-183 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 Pfam PF00923 Transaldolase 14 311 3.6E-103 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 PANTHER PTHR10683:SF18 1 316 4.5E-183 T 22-04-2016 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 SUPERFAMILY SSF51569 1 316 2.47E-117 T 22-04-2016 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 TIGRFAM TIGR00874 talAB: transaldolase 3 316 4.3E-157 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 Hamap MF_00492 Transaldolase [tal]. 2 316 51.527 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS04765 bfb6d88714c2cbfa91664ea014088970 317 Gene3D G3DSA:3.20.20.70 3 315 1.7E-132 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS11195 a247968996a31046e222da759b006533 439 SUPERFAMILY SSF53474 276 430 6.38E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11195 a247968996a31046e222da759b006533 439 Gene3D G3DSA:3.40.50.1820 319 429 3.3E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11195 a247968996a31046e222da759b006533 439 Gene3D G3DSA:3.40.50.1820 23 252 3.3E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11195 a247968996a31046e222da759b006533 439 SUPERFAMILY SSF53474 27 303 6.51E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992 124 210 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992 18 106 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992 271 278 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992 333 435 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 Pfam PF00561 alpha/beta hydrolase fold 59 221 3.5E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS11195 a247968996a31046e222da759b006533 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 149 163 1.3E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS11195 a247968996a31046e222da759b006533 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 91 102 1.3E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS11195 a247968996a31046e222da759b006533 439 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 61 69 1.3E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992:SF888 124 210 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992:SF888 18 106 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992:SF888 271 278 7.2E-128 T 22-04-2016 SAMA_RS11195 a247968996a31046e222da759b006533 439 PANTHER PTHR10992:SF888 333 435 7.2E-128 T 22-04-2016 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 PANTHER PTHR11142 1 259 5.8E-102 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.0E-76 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 Pfam PF01416 tRNA pseudouridine synthase 142 244 1.4E-30 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 Pfam PF01416 tRNA pseudouridine synthase 8 103 4.9E-10 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 36.125 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 PIRSF PIRSF001430 1 254 2.9E-82 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 SUPERFAMILY SSF55120 1 255 2.59E-93 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 Gene3D G3DSA:3.30.70.660 106 241 6.6E-47 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS11235 b863eddec7b5b0ab6d16fc6b90cd726d 261 Gene3D G3DSA:3.30.70.580 1 104 1.1E-38 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 13 291 1.0E-28 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 SUPERFAMILY SSF53067 122 296 2.16E-41 T 22-04-2016 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 PANTHER PTHR12862 10 275 1.2E-83 T 22-04-2016 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 SUPERFAMILY SSF53067 10 119 3.97E-23 T 22-04-2016 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 Gene3D G3DSA:3.30.420.40 11 86 3.2E-4 T 22-04-2016 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 PANTHER PTHR12862:SF5 10 275 1.2E-83 T 22-04-2016 SAMA_RS04925 8a8f8bd05fea786848aa10a8ec9c6259 301 Gene3D G3DSA:3.30.420.40 210 281 3.3E-4 T 22-04-2016 SAMA_RS16955 8fb3e60bd5598c3a315c8a2f8b86d552 388 Pfam PF07219 HemY protein N-terminus 26 132 2.7E-25 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 SAMA_RS16955 8fb3e60bd5598c3a315c8a2f8b86d552 388 Gene3D G3DSA:1.25.40.10 90 209 2.2E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS16955 8fb3e60bd5598c3a315c8a2f8b86d552 388 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 6 385 3.2E-70 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 SAMA_RS16955 8fb3e60bd5598c3a315c8a2f8b86d552 388 SUPERFAMILY SSF48452 268 387 8.34E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS16955 8fb3e60bd5598c3a315c8a2f8b86d552 388 Gene3D G3DSA:1.25.40.10 273 387 4.6E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 446 569 5.8E-8 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Gene3D G3DSA:3.40.50.720 438 610 3.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 PIRSF PIRSF000727 4 795 4.6E-261 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Gene3D G3DSA:3.30.360.10 611 770 1.4E-48 T 22-04-2016 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Gene3D G3DSA:3.40.1160.10 2 51 7.5E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Gene3D G3DSA:3.40.1160.10 106 293 7.5E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 SUPERFAMILY SSF51735 438 611 1.02E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 7 400 5.9E-64 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 SUPERFAMILY SSF53633 6 292 2.62E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Pfam PF00742 Homoserine dehydrogenase 589 788 1.1E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 SUPERFAMILY SSF55347 589 775 6.02E-46 T 22-04-2016 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 PANTHER PTHR21499 367 794 9.0E-190 T 22-04-2016 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 635 657 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 Pfam PF00696 Amino acid kinase family 7 278 2.1E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS16520 36b8a003906d2652c586184772eaa36d 797 PANTHER PTHR21499:SF29 367 794 9.0E-190 T 22-04-2016 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 1.8E-173 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 SUPERFAMILY SSF51713 1 363 5.23E-163 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 Gene3D G3DSA:3.20.20.105 1 366 1.9E-170 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 PANTHER PTHR21148:SF26 1 368 6.0E-183 T 22-04-2016 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 PANTHER PTHR21148 1 368 6.0E-183 T 22-04-2016 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.2E-94 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 4.6E-183 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS11450 171bd1dbd1bec19dc9bee450b625ca45 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.007 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 SUPERFAMILY SSF51230 115 207 4.97E-24 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Gene3D G3DSA:3.30.559.10 285 524 9.5E-96 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 SUPERFAMILY SSF47005 219 266 6.67E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Gene3D G3DSA:2.40.50.100 115 207 1.2E-20 T 22-04-2016 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Gene3D G3DSA:2.40.50.100 1 96 7.2E-25 T 22-04-2016 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Gene3D G3DSA:4.10.320.10 222 272 4.3E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 SUPERFAMILY SSF51230 1 96 6.15E-27 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Pfam PF00364 Biotin-requiring enzyme 4 73 3.3E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Pfam PF00364 Biotin-requiring enzyme 116 187 1.8E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 294 524 5.8E-84 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 SUPERFAMILY SSF52777 285 524 2.58E-77 T 22-04-2016 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 Pfam PF02817 e3 binding domain 227 261 4.8E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 PANTHER PTHR23151 23 527 4.8E-252 T 22-04-2016 SAMA_RS08925 2115c980c4ee68e8401256568e939460 527 PANTHER PTHR23151:SF62 23 527 4.8E-252 T 22-04-2016 SAMA_RS07595 e523b53ec4d2b1b235866e2e75b9ee75 203 Gene3D G3DSA:1.10.287.950 31 156 4.0E-5 T 22-04-2016 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.0E-133 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Gene3D G3DSA:3.40.50.10750 524 682 2.7E-68 T 22-04-2016 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.8E-124 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Gene3D G3DSA:3.40.50.300 2 174 8.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 PIRSF PIRSF006107 1 712 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 SUPERFAMILY SSF52540 1 240 1.38E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Gene3D G3DSA:3.40.1390.20 224 365 8.8E-34 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Pfam PF07085 DRTGG domain 233 345 4.1E-32 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 SUPERFAMILY SSF75138 229 353 2.62E-28 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 PANTHER PTHR23406 178 712 1.5E-57 T 22-04-2016 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 PANTHER PTHR23406:SF3 178 712 1.5E-57 T 22-04-2016 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 Pfam PF13500 AAA domain 3 229 9.9E-44 T 22-04-2016 SAMA_RS07775 1284d411d3632de8b3132fa6274d0282 712 SUPERFAMILY SSF53659 392 709 1.23E-93 T 22-04-2016 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 33.31 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 8 194 2.0E-106 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 PANTHER PTHR38100:SF1 1 204 2.9E-88 T 22-04-2016 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 PANTHER PTHR38100 1 204 2.9E-88 T 22-04-2016 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 Gene3D G3DSA:1.10.3890.10 1 202 2.5E-77 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 Pfam PF04356 Protein of unknown function (DUF489) 7 195 3.8E-72 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 SAMA_RS10755 d20f0d02d6b808cf2d185fbd98d5dc41 204 SUPERFAMILY SSF101322 1 202 1.57E-76 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 443 2.0E-27 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Gene3D G3DSA:3.30.310.50 471 548 2.3E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 SUPERFAMILY SSF55957 438 550 7.19E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 PANTHER PTHR22573 18 554 5.4E-249 T 22-04-2016 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 318 7.5E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Gene3D G3DSA:3.40.120.10 314 450 6.8E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Gene3D G3DSA:3.40.120.10 31 229 3.4E-53 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 SUPERFAMILY SSF53738 309 452 1.45E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 184 6.7E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 144 153 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Gene3D G3DSA:3.40.120.10 230 313 2.2E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 548 8.9E-256 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 495 536 2.5E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 SUPERFAMILY SSF53738 26 239 5.65E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 PANTHER PTHR22573:SF52 18 554 5.4E-249 T 22-04-2016 SAMA_RS08900 0fc1fca2b3c5d5cb72001a5d9393b0de 560 SUPERFAMILY SSF53738 213 317 5.53E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.4E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 Gene3D G3DSA:3.40.50.300 187 461 5.9E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 Gene3D G3DSA:1.10.860.10 24 126 3.9E-39 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 SMART SM00382 220 419 0.0016 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 PANTHER PTHR30153 8 468 5.5E-218 T 22-04-2016 SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 7.0E-116 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 4.4E-176 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 SUPERFAMILY SSF52540 201 272 6.82E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 SUPERFAMILY SSF52540 299 452 6.82E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15965 ac99d1c296fd0786a45608c6b60dc4dd 468 SUPERFAMILY SSF48024 22 133 2.35E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 SUPERFAMILY SSF116726 158 236 1.83E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 SUPERFAMILY SSF51735 1 162 2.05E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 SUPERFAMILY SSF116726 400 448 5.1E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PANTHER PTHR13789 1 181 1.2E-83 T 22-04-2016 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PANTHER PTHR13789 427 451 1.2E-83 T 22-04-2016 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Gene3D G3DSA:3.40.50.720 244 387 5.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Gene3D G3DSA:3.40.50.720 1 163 1.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PANTHER PTHR13789:SF225 1 181 1.2E-83 T 22-04-2016 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PANTHER PTHR13789:SF225 427 451 1.2E-83 T 22-04-2016 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Gene3D G3DSA:3.30.70.1450 400 447 3.1E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 SUPERFAMILY SSF51735 244 387 2.66E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.4E-32 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.4E-32 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.4E-32 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.4E-32 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.4E-32 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Gene3D G3DSA:3.30.70.1450 164 237 9.3E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Pfam PF02080 TrkA-C domain 400 448 9.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Pfam PF02080 TrkA-C domain 166 236 4.1E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Pfam PF02254 TrkA-N domain 246 361 4.6E-27 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SAMA_RS00190 3da33a6ac44cd2d363d8fc4129c4d397 469 Pfam PF02254 TrkA-N domain 3 114 7.4E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 PRINTS PR01021 OMPA domain signature 378 400 3.5E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 PRINTS PR01021 OMPA domain signature 423 439 3.5E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 PRINTS PR01021 OMPA domain signature 408 423 3.5E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 PANTHER PTHR30128 374 480 2.5E-35 T 22-04-2016 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 Pfam PF00691 OmpA family 377 473 4.2E-18 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 Gene3D G3DSA:3.30.1330.60 374 479 2.0E-33 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 Pfam PF16234 Domain of unknown function (DUF4892) 50 168 6.2E-8 T 22-04-2016 IPR032608 Protein of unknown function DUF4892 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 Pfam PF16234 Domain of unknown function (DUF4892) 199 331 5.4E-7 T 22-04-2016 IPR032608 Protein of unknown function DUF4892 SAMA_RS03675 85a0adaefd157cbba877db4a7f5abda4 484 SUPERFAMILY SSF103088 373 479 9.81E-32 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.9E-35 T 22-04-2016 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 SUPERFAMILY SSF47413 1 59 3.84E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 SMART SM00354 1 71 2.9E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 Gene3D G3DSA:3.40.50.2300 54 173 1.7E-37 T 22-04-2016 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 Gene3D G3DSA:3.40.50.2300 174 309 8.0E-52 T 22-04-2016 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 PANTHER PTHR30146 1 335 8.7E-110 T 22-04-2016 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 Gene3D G3DSA:1.10.260.40 3 53 1.3E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.3E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS01585 da3fef6ed692ac38c11beac92191a1e5 335 SUPERFAMILY SSF53822 62 332 1.25E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 15 373 8.6E-124 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 SUPERFAMILY SSF53927 11 153 7.44E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 154 376 1.3E-60 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 Gene3D G3DSA:3.40.140.10 11 137 2.5E-34 T 22-04-2016 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 PIRSF PIRSF006769 7 378 1.3E-123 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 Pfam PF01872 RibD C-terminal domain 156 371 1.6E-45 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 SUPERFAMILY SSF53597 154 374 1.27E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 PANTHER PTHR11079 11 216 1.1E-65 T 22-04-2016 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 Gene3D G3DSA:3.40.430.10 138 375 1.1E-67 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 109 1.5E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SAMA_RS05300 3c87d22195a2eecf1def047b32714729 378 PANTHER PTHR11079:SF10 11 216 1.1E-65 T 22-04-2016 SAMA_RS10035 45995fa7ea84ae8b25bf6bcf7e935fce 409 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 322 342 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SAMA_RS10035 45995fa7ea84ae8b25bf6bcf7e935fce 409 Pfam PF00860 Permease family 9 374 8.2E-96 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS10035 45995fa7ea84ae8b25bf6bcf7e935fce 409 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 8 398 4.4E-114 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SAMA_RS10035 45995fa7ea84ae8b25bf6bcf7e935fce 409 PANTHER PTHR11119:SF49 10 400 1.3E-167 T 22-04-2016 SAMA_RS10035 45995fa7ea84ae8b25bf6bcf7e935fce 409 PANTHER PTHR11119 10 400 1.3E-167 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS00290 585a402ba5e4c34566c39e6e61a3847f 250 PANTHER PTHR30105 1 250 5.4E-85 T 22-04-2016 SAMA_RS00290 585a402ba5e4c34566c39e6e61a3847f 250 Pfam PF04748 Divergent polysaccharide deacetylase 23 233 5.1E-71 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ SAMA_RS00290 585a402ba5e4c34566c39e6e61a3847f 250 SUPERFAMILY SSF88713 20 233 3.5E-69 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SAMA_RS00290 585a402ba5e4c34566c39e6e61a3847f 250 Gene3D G3DSA:3.20.20.370 15 239 6.1E-83 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 PANTHER PTHR11571 1 203 3.3E-40 T 22-04-2016 SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 SUPERFAMILY SSF47616 77 203 6.54E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 Gene3D G3DSA:1.20.1050.10 93 203 1.2E-15 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 Gene3D G3DSA:3.40.30.10 1 92 4.3E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 PANTHER PTHR11571:SF145 1 203 3.3E-40 T 22-04-2016 SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 SUPERFAMILY SSF52833 5 74 2.75E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02095 c728684f458f063749e609bc52cc4808 206 Pfam PF14497 Glutathione S-transferase, C-terminal domain 98 202 1.5E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SAMA_RS07675 d4b6ee238da36bf92a7ab2a05cc42de0 348 Pfam PF14351 Domain of unknown function (DUF4401) 29 344 4.7E-60 T 22-04-2016 IPR025513 Domain of unknown function DUF4401 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 275 347 2.0E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 449 520 4.1E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 19 87 1.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 190 260 2.7E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 362 434 1.6E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 SMART SM00316 103 171 2.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.8E-96 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 429 539 2.01E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 360 438 5.6E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 PIRSF PIRSF002111 1 534 1.7E-217 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 448 530 3.1E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 21 101 1.7E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 192 278 1.5E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 280 359 9.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 189 276 7.31E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 PANTHER PTHR10724:SF6 1 514 2.5E-274 T 22-04-2016 SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 2 112 6.78E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 106 184 4.53E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 255 359 1.79E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 190 260 3.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 275 347 3.4E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 18 86 9.7E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 105 171 5.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 361 434 1.3E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Pfam PF00575 S1 RNA binding domain 449 520 5.8E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS09050 43f98670562391057b926eef139be121 555 Gene3D G3DSA:2.40.50.140 102 172 4.9E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09050 43f98670562391057b926eef139be121 555 PANTHER PTHR10724 1 514 2.5E-274 T 22-04-2016 SAMA_RS09050 43f98670562391057b926eef139be121 555 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.1E-230 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS09050 43f98670562391057b926eef139be121 555 SUPERFAMILY SSF50249 342 440 4.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10485 af7d62fb9e24201318364e5b7f9926e0 159 Pfam PF05981 CreA protein 21 143 3.6E-45 T 22-04-2016 IPR010292 Uncharacterised protein family CreA SAMA_RS10485 af7d62fb9e24201318364e5b7f9926e0 159 PANTHER PTHR37952:SF2 1 157 3.6E-69 T 22-04-2016 SAMA_RS10485 af7d62fb9e24201318364e5b7f9926e0 159 PIRSF PIRSF003174 1 153 1.6E-45 T 22-04-2016 IPR010292 Uncharacterised protein family CreA SAMA_RS10485 af7d62fb9e24201318364e5b7f9926e0 159 PANTHER PTHR37952 1 157 3.6E-69 T 22-04-2016 SAMA_RS07575 435a682c31507afb22ecc9d8530ec182 282 PIRSF PIRSF028200 1 282 2.0E-81 T 22-04-2016 IPR016875 Uncharacterised conserved protein UCP028200 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1341 3.3E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.299 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:3.90.1110.10 153 230 9.2E-67 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:3.90.1110.10 347 445 9.2E-67 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856 1035 1129 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856 341 726 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856 744 931 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 719 1264 7.6E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.40.50.100 715 793 4.9E-30 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:3.90.1100.10 660 714 2.4E-146 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:3.90.1100.10 20 151 2.4E-146 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:3.90.1100.10 446 592 2.4E-146 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 356 455 9.9E-16 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 223 1.5E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 SUPERFAMILY SSF64484 1040 1340 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 SUPERFAMILY SSF64484 344 940 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 SUPERFAMILY SSF64484 12 226 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 657 8.7E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856:SF20 1035 1129 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856:SF20 341 726 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856:SF20 744 931 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 3.7E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.30.150.10 593 657 1.3E-28 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Pfam PF04563 RNA polymerase beta subunit 26 501 8.9E-52 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.40.270.10 1061 1242 1.6E-86 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.40.270.10 794 821 1.6E-86 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.40.50.150 1046 1060 5.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 Gene3D G3DSA:2.40.50.150 829 938 5.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01090 f6f33fc0a8eddd9541bed04a67d31ea8 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 Gene3D G3DSA:2.40.50.100 308 343 1.6E-13 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 Gene3D G3DSA:2.40.50.100 70 100 1.6E-13 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 344 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 380 403 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 36 59 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 439 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 380 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 439 459 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 2.6E-47 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 SUPERFAMILY SSF111369 59 139 5.23E-6 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 ProSitePatterns PS00543 HlyD family secretion proteins signature. 424 446 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PANTHER PTHR30386 5 121 3.7E-169 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PANTHER PTHR30386 170 460 3.7E-169 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 Pfam PF13533 Biotin-lipoyl like 67 112 6.6E-6 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PANTHER PTHR30386:SF4 5 121 3.7E-169 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 PANTHER PTHR30386:SF4 170 460 3.7E-169 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 Pfam PF13437 HlyD family secretion protein 310 412 1.7E-16 T 22-04-2016 SAMA_RS16970 bb16166aa8656af0370e02a1818a62c5 460 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 27 460 3.5E-149 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SAMA_RS03745 2e96677df52d4610eed7a1a6ca16a7fc 114 Pfam PF02643 Uncharacterized ACR, COG1430 15 112 1.9E-20 T 22-04-2016 IPR003795 Protein of unknown function DUF192 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Gene3D G3DSA:2.170.130.10 62 180 2.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 PANTHER PTHR40980:SF3 680 959 2.4E-42 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Pfam PF00593 TonB dependent receptor 684 974 3.4E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 179 1.1E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 363 415 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 62 253 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 295 335 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 806 974 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 602 773 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 SUPERFAMILY SSF56935 467 534 1.59E-81 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 PANTHER PTHR40980 680 959 2.4E-42 T 22-04-2016 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 59 975 1.4E-180 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Gene3D G3DSA:2.40.170.20 461 546 8.4E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Gene3D G3DSA:2.40.170.20 603 974 8.4E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01545 97796c0457c029139a7a424f772cfcb4 976 Gene3D G3DSA:2.40.170.20 181 415 8.4E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PANTHER PTHR30065 1 261 3.5E-84 T 22-04-2016 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PANTHER PTHR30065:SF1 1 261 3.5E-84 T 22-04-2016 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 Pfam PF01311 Bacterial export proteins, family 1 14 245 7.3E-64 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 248 9.5E-69 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 3.7E-22 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.7E-22 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 3.7E-22 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SAMA_RS11965 ce67ad8f3d6b9e2f9532223fe4d13777 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.7E-22 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 PANTHER PTHR30462:SF0 1 871 2.9E-292 T 22-04-2016 SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 PANTHER PTHR30462 1 871 2.9E-292 T 22-04-2016 SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 Pfam PF02470 MlaD protein 627 718 2.5E-7 T 22-04-2016 IPR003399 Mce/MlaD SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 Pfam PF02470 MlaD protein 41 132 4.7E-13 T 22-04-2016 IPR003399 Mce/MlaD SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 Pfam PF02470 MlaD protein 277 341 1.9E-7 T 22-04-2016 IPR003399 Mce/MlaD SAMA_RS08225 c7d80553fd43edeeb2fe15a340dc750f 871 Pfam PF02470 MlaD protein 387 449 3.9E-7 T 22-04-2016 IPR003399 Mce/MlaD SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 PANTHER PTHR11587 1 407 0.0 T 22-04-2016 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 16 24 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 PANTHER PTHR11587:SF6 1 407 0.0 T 22-04-2016 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 126 137 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 Gene3D G3DSA:3.40.50.620 11 181 9.8E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 SUPERFAMILY SSF52402 11 175 1.32E-44 T 22-04-2016 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 Gene3D G3DSA:3.90.1260.10 184 404 9.9E-86 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 Pfam PF00764 Arginosuccinate synthase 14 401 2.1E-141 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 10 407 50.072 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 12 401 1.7E-135 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01400 e0734babd80a4a9c854a18a0af4f31b3 407 SUPERFAMILY SSF69864 182 405 5.62E-85 T 22-04-2016 SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 PANTHER PTHR31131 1 126 1.4E-35 T 22-04-2016 SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 Pfam PF13840 ACT domain 57 118 3.9E-22 T 22-04-2016 IPR027795 GATS-like ACT domain SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 SUPERFAMILY SSF55021 2 58 8.93E-14 T 22-04-2016 SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 PIRSF PIRSF008459 1 127 9.8E-47 T 22-04-2016 IPR016540 Uncharacterised conserved protein UCP008459 SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 SUPERFAMILY SSF55021 60 124 6.42E-20 T 22-04-2016 SAMA_RS08630 06f439c63f4c9d01a0e98682aa31c779 132 Gene3D G3DSA:3.30.2130.10 3 121 2.3E-19 T 22-04-2016 SAMA_RS18215 f3aa3ffe5488649fc2ad1f96e7ed27d7 831 Gene3D G3DSA:3.40.630.10 37 303 2.0E-31 T 22-04-2016 SAMA_RS18215 f3aa3ffe5488649fc2ad1f96e7ed27d7 831 Pfam PF00246 Zinc carboxypeptidase 51 277 1.5E-17 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS18215 f3aa3ffe5488649fc2ad1f96e7ed27d7 831 SMART SM00631 43 323 0.0091 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS18215 f3aa3ffe5488649fc2ad1f96e7ed27d7 831 SUPERFAMILY SSF53187 37 316 1.49E-48 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 Gene3D G3DSA:3.40.47.10 4 204 1.4E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 284 372 9.4E-24 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 151 216 4.2E-20 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069 92 374 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069 51 71 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069 1 26 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 Gene3D G3DSA:3.40.47.10 205 372 1.8E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069:SF1 92 374 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069:SF1 51 71 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 PANTHER PTHR34069:SF1 1 26 1.3E-181 T 22-04-2016 SAMA_RS07855 628b5d89e47d3b4d587cc7c400982b21 374 SUPERFAMILY SSF53901 3 373 2.01E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.277 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 Gene3D G3DSA:3.30.70.330 6 97 5.5E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 SUPERFAMILY SSF54189 3 93 3.06E-32 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 PANTHER PTHR11620 9 95 3.6E-32 T 22-04-2016 SAMA_RS01135 0acfb0ebcdc203d9b8fe8162447e4b92 100 Pfam PF00276 Ribosomal protein L23 9 95 6.6E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 Hamap MF_00900 GTPase HflX [hflX]. 27 389 46.157 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PIRSF PIRSF006809 3 420 3.9E-148 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 Pfam PF01926 50S ribosome-binding GTPase 200 317 2.9E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PANTHER PTHR10229:SF0 1 435 3.2E-185 T 22-04-2016 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 Gene3D G3DSA:3.40.50.300 198 360 1.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 SUPERFAMILY SSF54980 365 422 1.34E-10 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 SUPERFAMILY SSF52540 197 360 3.98E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.4E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.4E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 266 284 2.4E-11 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 359 3.1E-154 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 8.6E-30 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SAMA_RS15770 1d6f01c5a6da0f0053354e11b73c43ea 435 PANTHER PTHR10229 1 435 3.2E-185 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 SUPERFAMILY SSF51735 3 174 1.21E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 Gene3D G3DSA:3.40.50.720 2 210 4.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 232 1.9E-12 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 2.5E-22 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 PANTHER PTHR22604:SF123 1 205 2.5E-26 T 22-04-2016 SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 PANTHER PTHR22604 1 205 2.5E-26 T 22-04-2016 SAMA_RS11835 28dbe9407060a925e9210e2dedc17162 318 SUPERFAMILY SSF55347 133 271 1.44E-7 T 22-04-2016 SAMA_RS01620 385c04dd24604116c07c90ffe45067de 265 Gene3D G3DSA:3.20.20.380 1 250 9.6E-65 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SAMA_RS01620 385c04dd24604116c07c90ffe45067de 265 SUPERFAMILY SSF110395 4 247 4.05E-50 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SAMA_RS01620 385c04dd24604116c07c90ffe45067de 265 PANTHER PTHR12598:SF0 1 210 2.0E-58 T 22-04-2016 SAMA_RS01620 385c04dd24604116c07c90ffe45067de 265 Pfam PF03932 CutC family 4 210 8.2E-57 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SAMA_RS01620 385c04dd24604116c07c90ffe45067de 265 PANTHER PTHR12598 1 210 2.0E-58 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 SMART SM00304 183 235 1.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 SUPERFAMILY SSF158472 191 232 2.88E-5 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 417 7.5E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 PANTHER PTHR10799:SF774 1 56 8.4E-30 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 PANTHER PTHR10799:SF774 295 418 8.4E-30 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 PANTHER PTHR10799 1 56 8.4E-30 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 PANTHER PTHR10799 295 418 8.4E-30 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 SMART SM00267 251 423 4.2E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 418 6.4E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 Gene3D G3DSA:3.30.70.270 263 418 4.3E-47 T 22-04-2016 SAMA_RS09900 6515bdab5c5b1d63c32cb73881eb52b4 435 SUPERFAMILY SSF55073 267 418 7.45E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 PANTHER PTHR23547:SF1 1 403 2.7E-167 T 22-04-2016 SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 SUPERFAMILY SSF103473 12 398 2.35E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 Pfam PF07690 Major Facilitator Superfamily 27 340 1.8E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 PANTHER PTHR23547 1 403 2.7E-167 T 22-04-2016 SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 Gene3D G3DSA:1.20.1250.20 13 190 3.6E-12 T 22-04-2016 SAMA_RS02655 7dad0a500228031c5bec986559d156d6 403 Gene3D G3DSA:1.20.1250.20 214 398 4.9E-15 T 22-04-2016 SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 PANTHER PTHR12862:SF5 5 295 1.9E-42 T 22-04-2016 SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 SUPERFAMILY SSF53067 148 314 6.94E-33 T 22-04-2016 SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 Gene3D G3DSA:3.30.420.40 39 121 6.2E-4 T 22-04-2016 SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 SUPERFAMILY SSF53067 38 144 1.4E-20 T 22-04-2016 SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 40 314 1.8E-22 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type SAMA_RS01605 9cd3de9229e115c22f5f8b54013b7595 327 PANTHER PTHR12862 5 295 1.9E-42 T 22-04-2016 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 1.7E-12 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 Pfam PF00578 AhpC/TSA family 5 140 6.2E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 SUPERFAMILY SSF52833 3 195 3.19E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 PANTHER PTHR10681 3 195 7.2E-84 T 22-04-2016 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 Gene3D G3DSA:3.30.1020.10 161 194 4.6E-14 T 22-04-2016 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 PIRSF PIRSF000239 1 200 5.1E-60 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SAMA_RS10950 36f0e0f41529394c096eab51a66574b4 201 Gene3D G3DSA:3.40.30.10 4 160 2.4E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 Gene3D G3DSA:1.20.5.100 201 232 2.1E-9 T 22-04-2016 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 Gene3D G3DSA:1.10.760.10 19 197 1.6E-60 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 SUPERFAMILY SSF46626 21 196 6.49E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 PANTHER PTHR10266 1 232 6.7E-72 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 Pfam PF02167 Cytochrome C1 family 34 231 1.5E-22 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 PRINTS PR00603 Cytochrome C1 signature 43 62 6.95E-6 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 PRINTS PR00603 Cytochrome C1 signature 178 197 6.95E-6 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 PRINTS PR00603 Cytochrome C1 signature 197 212 6.95E-6 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SAMA_RS15745 aaf59a86b9e1cda86c9e2244f1b5553d 232 PANTHER PTHR10266:SF3 1 232 6.7E-72 T 22-04-2016 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 Pfam PF01145 SPFH domain / Band 7 family 33 202 2.3E-25 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 SMART SM00244 28 186 4.6E-55 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PANTHER PTHR10264:SF27 5 294 1.6E-119 T 22-04-2016 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 SUPERFAMILY SSF117892 59 193 8.76E-40 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 Pfam PF16200 C-terminal region of band_7 252 301 2.1E-9 T 22-04-2016 IPR032435 Band 7, C-terminal extension SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PRINTS PR00721 Stomatin signature 138 161 3.0E-25 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PRINTS PR00721 Stomatin signature 83 104 3.0E-25 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PRINTS PR00721 Stomatin signature 162 180 3.0E-25 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PRINTS PR00721 Stomatin signature 181 202 3.0E-25 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PRINTS PR00721 Stomatin signature 118 135 3.0E-25 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS02250 d380a8296e876108f914936cced94a3c 310 PANTHER PTHR10264 5 294 1.6E-119 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 SMART SM00267 347 517 8.2E-54 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 PANTHER PTHR10799:SF750 390 516 1.5E-26 T 22-04-2016 SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 PANTHER PTHR10799:SF750 141 200 1.5E-26 T 22-04-2016 SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 515 2.0E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 Gene3D G3DSA:3.30.70.270 360 515 4.9E-53 T 22-04-2016 SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 513 2.9E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 SUPERFAMILY SSF55073 362 515 2.9E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 PANTHER PTHR10799 390 516 1.5E-26 T 22-04-2016 SAMA_RS12635 ad5e7dd2dc58a9ad5fa8abdb8de81941 518 PANTHER PTHR10799 141 200 1.5E-26 T 22-04-2016 SAMA_RS07695 17483c61b4994fe45849434839ee4520 105 Pfam PF07027 Protein of unknown function (DUF1318) 16 105 1.3E-30 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 SAMA_RS07695 17483c61b4994fe45849434839ee4520 105 PIRSF PIRSF025560 1 105 1.1E-34 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 SAMA_RS02715 a3c4dc99df3d94d98ddaa6fd8af951d9 349 Pfam PF13533 Biotin-lipoyl like 73 118 1.5E-8 T 22-04-2016 SAMA_RS02715 a3c4dc99df3d94d98ddaa6fd8af951d9 349 Gene3D G3DSA:2.40.50.100 222 257 5.2E-10 T 22-04-2016 SAMA_RS02715 a3c4dc99df3d94d98ddaa6fd8af951d9 349 Gene3D G3DSA:2.40.50.100 71 102 5.2E-10 T 22-04-2016 SAMA_RS02715 a3c4dc99df3d94d98ddaa6fd8af951d9 349 PANTHER PTHR30386 1 300 1.1E-12 T 22-04-2016 SAMA_RS02715 a3c4dc99df3d94d98ddaa6fd8af951d9 349 Pfam PF13437 HlyD family secretion protein 229 299 1.3E-5 T 22-04-2016 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 PANTHER PTHR10029 3 88 4.1E-33 T 22-04-2016 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 SUPERFAMILY SSF54975 1 89 2.62E-27 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 PRINTS PR00112 Acylphosphatase signature 3 18 1.3E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 PRINTS PR00112 Acylphosphatase signature 24 49 1.3E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 Pfam PF00708 Acylphosphatase 1 88 2.6E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 Gene3D G3DSA:3.30.70.100 1 88 6.4E-30 T 22-04-2016 SAMA_RS06935 062d9f5742191eb59edb4bd824c23edb 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 PIRSF PIRSF036618 1 599 6.1E-289 T 22-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Gene3D G3DSA:2.40.340.10 525 593 3.0E-25 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 13 146 3.8E-49 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 370 506 6.0E-30 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 SUPERFAMILY SSF63867 519 599 8.11E-21 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 SUPERFAMILY SSF63882 198 369 1.07E-47 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Gene3D G3DSA:3.40.50.300 10 175 3.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Gene3D G3DSA:3.90.105.10 324 356 4.3E-17 T 22-04-2016 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 446 479 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Pfam PF03453 MoeA N-terminal region (domain I and II) 203 360 6.0E-31 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 13 173 6.7E-41 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Gene3D G3DSA:3.40.980.10 357 524 2.4E-65 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 SUPERFAMILY SSF53218 370 514 2.75E-43 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Gene3D G3DSA:2.170.190.11 244 323 2.3E-25 T 22-04-2016 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Pfam PF03454 MoeA C-terminal region (domain IV) 526 595 3.1E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 Pfam PF00994 Probable molybdopterin binding domain 373 510 1.6E-25 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 PANTHER PTHR10192 201 599 3.2E-158 T 22-04-2016 SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 SMART SM00852 373 510 6.6E-42 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00605 2ec0e8f900572bcf6cbabcf1966e6c85 599 SUPERFAMILY SSF52540 11 175 5.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.3E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 PANTHER PTHR21349 1 101 1.6E-43 T 22-04-2016 SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.6E-42 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 SUPERFAMILY SSF141091 1 102 4.84E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SAMA_RS14780 144f601ab376fc54dd0b0d661e527302 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.73 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 PIRSF PIRSF016262 1 215 2.1E-63 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 183 9.1E-67 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 159 5.1E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 PANTHER PTHR10993 1 208 9.4E-78 T 22-04-2016 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 SUPERFAMILY SSF55681 5 206 1.99E-71 T 22-04-2016 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 38.407 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 4.0E-24 T 22-04-2016 SAMA_RS13550 9e4d93b14ffdba90575c0630f29f2070 216 Gene3D G3DSA:3.90.1550.10 3 203 2.5E-72 T 22-04-2016 SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 Pfam PF01300 Telomere recombination 12 187 4.6E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 PANTHER PTHR17490 7 182 2.6E-90 T 22-04-2016 SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 SUPERFAMILY SSF55821 8 184 7.02E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 Gene3D G3DSA:3.90.870.10 8 187 2.4E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 PANTHER PTHR17490:SF8 7 182 2.6E-90 T 22-04-2016 SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 185 36.728 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 SAMA_RS00240 0d93b4a2a5dd30e6ae3eac570f78cffa 187 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 187 1.9E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 Pfam PF02504 Fatty acid synthesis protein 5 323 4.5E-105 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 PANTHER PTHR30100 2 342 7.2E-135 T 22-04-2016 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 Gene3D G3DSA:3.40.718.10 2 335 3.8E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 336 3.9E-111 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 SUPERFAMILY SSF53659 4 337 9.05E-106 T 22-04-2016 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 146.127 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 PIRSF PIRSF002465 2 340 7.7E-128 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SAMA_RS10355 fc842ed6d7c26384ffb7c42d8441c8d4 342 PANTHER PTHR30100:SF1 2 342 7.2E-135 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PANTHER PTHR11922:SF25 1 189 2.3E-76 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 2.8E-5 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 2.8E-5 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 78 89 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 123 135 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 103 111 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 3 17 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 51 60 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.5E-34 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 Gene3D G3DSA:3.40.50.880 3 186 1.1E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 Pfam PF00117 Glutamine amidotransferase class-I 5 185 5.4E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 184 6.4E-54 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PANTHER PTHR11922 1 189 2.3E-76 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 SUPERFAMILY SSF52317 2 186 1.26E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 1.2E-13 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.2E-13 T 22-04-2016 SAMA_RS11130 826a86488d1e4fc9a2235cfbc8606a49 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 1.2E-13 T 22-04-2016 SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 199 2.3E-69 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 Gene3D G3DSA:3.40.50.300 28 202 3.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 PANTHER PTHR11649 21 202 5.6E-50 T 22-04-2016 SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 SUPERFAMILY SSF52540 28 201 3.16E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 203 27.105 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SAMA_RS00465 678111ad16576385b89e2d3b6c7c1d41 217 Pfam PF01926 50S ribosome-binding GTPase 34 152 2.1E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 4.9E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 SUPERFAMILY SSF53901 5 270 7.59E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 SUPERFAMILY SSF53901 271 391 3.4E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.6E-42 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 PANTHER PTHR18919 1 391 2.5E-225 T 22-04-2016 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 PANTHER PTHR18919:SF110 1 391 2.5E-225 T 22-04-2016 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Pfam PF00108 Thiolase, N-terminal domain 6 263 7.5E-88 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 PIRSF PIRSF000429 1 392 1.1E-115 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Gene3D G3DSA:3.40.47.10 144 195 1.2E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Gene3D G3DSA:3.40.47.10 277 392 1.2E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Gene3D G3DSA:3.40.47.10 5 125 1.4E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 Gene3D G3DSA:3.40.47.10 196 276 1.4E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SAMA_RS07170 6f52c91ceb41d56bd113adcc8e5c266c 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SAMA_RS11935 58ea782956365971153fe5e4a96044cf 127 SMART SM00448 5 119 2.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11935 58ea782956365971153fe5e4a96044cf 127 SUPERFAMILY SSF52172 3 125 4.27E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS11935 58ea782956365971153fe5e4a96044cf 127 Gene3D G3DSA:3.40.50.2300 3 125 2.3E-40 T 22-04-2016 SAMA_RS11935 58ea782956365971153fe5e4a96044cf 127 PANTHER PTHR26402 5 125 1.8E-43 T 22-04-2016 SAMA_RS11935 58ea782956365971153fe5e4a96044cf 127 Pfam PF00072 Response regulator receiver domain 7 119 1.6E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 PANTHER PTHR21043 1 104 1.3E-43 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-37 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 Gene3D G3DSA:3.30.460.10 3 106 6.5E-39 T 22-04-2016 SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.088 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 4.0E-28 T 22-04-2016 SAMA_RS13510 5648ba197938bf3de435b6ebe06c8d24 108 SUPERFAMILY SSF81301 2 106 5.72E-38 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937:SF261 1 422 4.8E-296 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937:SF261 442 808 4.8E-296 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937:SF261 835 1133 4.8E-296 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1131 21.338 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 Gene3D G3DSA:3.40.50.300 1 166 6.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 Gene3D G3DSA:3.40.50.300 979 1133 6.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1122 2.6E-68 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 SUPERFAMILY SSF52540 931 1132 2.85E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 SUPERFAMILY SSF52540 1 210 2.85E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937 1 422 4.8E-296 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937 442 808 4.8E-296 T 22-04-2016 SAMA_RS07875 c48d35f7b8debde05422e6d101963ae3 1139 PANTHER PTHR18937 835 1133 4.8E-296 T 22-04-2016 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 9 873 4.5E-199 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 Pfam PF13116 Protein of unknown function 527 811 5.1E-77 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 PANTHER PTHR38690 902 929 5.2E-267 T 22-04-2016 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 PANTHER PTHR38690 969 1390 5.2E-267 T 22-04-2016 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 PANTHER PTHR38690 2 867 5.2E-267 T 22-04-2016 SAMA_RS19075 372a980c1efc2659d9097c3f62fa97ee 1515 Pfam PF13502 AsmA-like C-terminal region 1130 1370 8.3E-57 T 22-04-2016 IPR032712 AsmA-like, C-terminal SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 SUPERFAMILY SSF48695 19 451 6.19E-122 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 Pfam PF11783 Cytochrome c bacterial 257 427 1.4E-58 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 Gene3D G3DSA:1.10.780.10 11 248 4.5E-25 T 22-04-2016 SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 Pfam PF13435 Cytochrome c554 and c-prime 31 112 3.8E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 PIRSF PIRSF039014 4 455 1.2E-180 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SAMA_RS16570 d4689200f4427139dd9480b6508966e6 455 TIGRFAM TIGR04315 octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family 14 438 1.5E-183 T 22-04-2016 IPR024673 Octaheme c-type cytochrome SAMA_RS16935 e18d0ea8aadbfc4ded2ee10bc4f1a51e 809 SUPERFAMILY SSF81301 88 161 2.04E-5 T 22-04-2016 SAMA_RS16935 e18d0ea8aadbfc4ded2ee10bc4f1a51e 809 PANTHER PTHR38760 5 809 3.7E-253 T 22-04-2016 SAMA_RS16935 e18d0ea8aadbfc4ded2ee10bc4f1a51e 809 Pfam PF12633 Adenylate cyclase NT domain 15 207 4.4E-59 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 SAMA_RS16935 e18d0ea8aadbfc4ded2ee10bc4f1a51e 809 PIRSF PIRSF001444 9 803 6.0E-172 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 SAMA_RS16935 e18d0ea8aadbfc4ded2ee10bc4f1a51e 809 Pfam PF01295 Adenylate cyclase, class-I 217 798 6.2E-210 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 SUPERFAMILY SSF55957 445 563 5.23E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 233 318 9.9E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 SUPERFAMILY SSF53738 37 218 3.57E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 45 184 3.1E-40 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Gene3D G3DSA:3.30.310.50 476 552 3.4E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 331 449 2.8E-15 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 SUPERFAMILY SSF53738 213 319 5.1E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 PANTHER PTHR22573:SF54 24 578 5.4E-199 T 22-04-2016 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Gene3D G3DSA:3.40.120.10 238 314 4.2E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Gene3D G3DSA:3.40.120.10 19 217 6.0E-58 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Gene3D G3DSA:3.40.120.10 315 456 3.4E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 PANTHER PTHR22573 24 578 5.4E-199 T 22-04-2016 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 SUPERFAMILY SSF53738 310 454 6.28E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 302 317 2.3E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 142 156 2.3E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 2.3E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS06230 fef05e8c86f4eb56ac55cf3eb596fd9e 585 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 532 550 1.5E-5 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 SUPERFAMILY SSF102114 4 275 4.84E-74 T 22-04-2016 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 Gene3D G3DSA:3.20.20.70 3 284 3.7E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 3.3E-104 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 Pfam PF04055 Radical SAM superfamily 17 178 1.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 5.5E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 PANTHER PTHR22960 4 282 1.8E-127 T 22-04-2016 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 2.2E-9 T 22-04-2016 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 37.722 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18320 f576f7997999fbf454514dbaa7924108 326 SMART SM00729 13 227 2.8E-12 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 43.334 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.9E-111 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 1.5E-113 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 PANTHER PTHR20881 1 264 1.1E-177 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 PIRSF PIRSF000388 1 264 3.1E-104 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 Gene3D G3DSA:3.20.20.60 2 263 3.2E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 SUPERFAMILY SSF51621 3 263 2.15E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS04075 224a1be273b80e2b499660117afa47f8 264 PANTHER PTHR20881:SF3 1 264 1.1E-177 T 22-04-2016 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 Gene3D G3DSA:1.10.730.10 582 676 3.7E-6 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 Pfam PF05746 DALR anticodon binding domain 582 677 9.3E-11 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 SUPERFAMILY SSF109604 340 491 1.05E-8 T 22-04-2016 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 SMART SM00836 585 688 3.5E-4 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 25.973 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 2.7E-286 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.8E-208 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PANTHER PTHR30075:SF2 1 689 0.0 T 22-04-2016 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.4E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.4E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 1.4E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.4E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00115 4070232a97fb0b83cdaab78f82c9251e 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.4E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 Gene3D G3DSA:1.10.8.60 171 246 2.5E-30 T 22-04-2016 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 SUPERFAMILY SSF48019 248 365 1.36E-29 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 PANTHER PTHR11669 4 357 1.3E-171 T 22-04-2016 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 Gene3D G3DSA:1.20.272.10 247 363 1.6E-37 T 22-04-2016 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 Gene3D G3DSA:3.40.50.300 19 170 2.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 PANTHER PTHR11669:SF0 4 357 1.3E-171 T 22-04-2016 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 45 63 6.7E-6 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 128 146 6.7E-6 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 7 358 2.5E-131 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 SUPERFAMILY SSF52540 37 225 7.31E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 SMART SM00382 41 182 2.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 236 369 2.9E-39 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SAMA_RS19130 20da077cb39cce15287970eec11c4547 370 Pfam PF13177 DNA polymerase III, delta subunit 24 182 1.4E-44 T 22-04-2016 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PANTHER PTHR30330:SF3 204 463 1.6E-139 T 22-04-2016 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PANTHER PTHR30330:SF3 8 188 1.6E-139 T 22-04-2016 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 456 1.1E-113 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 231 250 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 321 339 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 97 119 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 203 221 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 425 445 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PRINTS PR00175 Sodium/alanine symporter signature 366 388 7.7E-41 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 Pfam PF01235 Sodium:alanine symporter family 63 463 9.2E-116 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PANTHER PTHR30330 204 463 1.6E-139 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 PANTHER PTHR30330 8 188 1.6E-139 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01535 65949e2cbf677c11db09f3c3314c4592 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 Gene3D G3DSA:3.90.1150.10 2 69 6.1E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 Gene3D G3DSA:3.90.1150.10 319 425 6.1E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.937 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 5.5E-193 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 Pfam PF00202 Aminotransferase class-III 32 395 3.3E-80 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 PANTHER PTHR11986 1 427 1.4E-231 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 PANTHER PTHR11986:SF5 1 427 1.4E-231 T 22-04-2016 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 Gene3D G3DSA:3.40.640.10 70 315 1.7E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS04395 f01ec86775890edc41f9b09f530132ce 427 SUPERFAMILY SSF53383 2 425 1.81E-136 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS11310 ce1efe7d32e172dbf75e12f083b65696 132 PANTHER PTHR22571 15 132 4.0E-17 T 22-04-2016 SAMA_RS11310 ce1efe7d32e172dbf75e12f083b65696 132 PANTHER PTHR22571:SF28 15 132 4.0E-17 T 22-04-2016 SAMA_RS04525 3f16170a0c19849ef2184d1c85e0ce92 266 PANTHER PTHR30269 3 265 6.5E-93 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS04525 3f16170a0c19849ef2184d1c85e0ce92 266 PANTHER PTHR30269:SF18 3 265 6.5E-93 T 22-04-2016 SAMA_RS04525 3f16170a0c19849ef2184d1c85e0ce92 266 Pfam PF01925 Sulfite exporter TauE/SafE 12 263 4.0E-50 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.9E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 PANTHER PTHR32194 2 174 7.6E-125 T 22-04-2016 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 PIRSF PIRSF039093 1 174 2.1E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 Pfam PF00227 Proteasome subunit 2 165 1.3E-21 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.643 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 Gene3D G3DSA:3.60.20.10 2 172 7.4E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS02375 c904e11f35f320a9b7adad58a5b9c54f 174 SUPERFAMILY SSF56235 2 172 9.16E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 PANTHER PTHR34698 1 217 1.1E-71 T 22-04-2016 SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 SMART SM00796 6 208 3.8E-69 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 PANTHER PTHR34698:SF2 1 217 1.1E-71 T 22-04-2016 SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 Pfam PF02682 Allophanate hydrolase subunit 1 7 208 4.4E-64 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 SUPERFAMILY SSF50891 95 217 3.34E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 Gene3D G3DSA:2.40.100.10 96 218 3.6E-47 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS00105 904232c2cd25ac78c59a13aa2a0489ef 220 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 25 217 4.7E-65 T 22-04-2016 IPR010016 KipI family SAMA_RS13825 cb97da45c40b585abaf90fbc94a22930 271 Gene3D G3DSA:1.10.3720.10 2 266 8.0E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13825 cb97da45c40b585abaf90fbc94a22930 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 266 6.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13825 cb97da45c40b585abaf90fbc94a22930 271 PANTHER PTHR30222 1 271 1.9E-84 T 22-04-2016 SAMA_RS13825 cb97da45c40b585abaf90fbc94a22930 271 SUPERFAMILY SSF161098 5 262 1.21E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13825 cb97da45c40b585abaf90fbc94a22930 271 PANTHER PTHR30222:SF1 1 271 1.9E-84 T 22-04-2016 SAMA_RS06355 74b97436904313c4ebe8f33a1c7b77de 84 SMART SM00899 1 76 3.6E-19 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SAMA_RS06355 74b97436904313c4ebe8f33a1c7b77de 84 Pfam PF04023 FeoA domain 1 75 2.4E-14 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SAMA_RS06355 74b97436904313c4ebe8f33a1c7b77de 84 SUPERFAMILY SSF50037 4 77 1.53E-15 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SAMA_RS06355 74b97436904313c4ebe8f33a1c7b77de 84 PANTHER PTHR33238 1 80 1.9E-19 T 22-04-2016 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 49.742 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 Gene3D G3DSA:3.20.20.210 2 353 4.8E-155 T 22-04-2016 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 SUPERFAMILY SSF51726 2 353 2.79E-122 T 22-04-2016 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 PANTHER PTHR21091 1 351 2.2E-157 T 22-04-2016 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 PANTHER PTHR21091:SF2 1 351 2.2E-157 T 22-04-2016 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 7.6E-140 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 2.9E-135 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS02105 50375c61157fd02720e295702eeab742 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SAMA_RS16515 cff3195be21163eb98e9951fe420d4fc 296 PANTHER PTHR21091 148 279 1.3E-42 T 22-04-2016 SAMA_RS16515 cff3195be21163eb98e9951fe420d4fc 296 Gene3D G3DSA:3.20.20.220 10 294 4.1E-105 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SAMA_RS16515 cff3195be21163eb98e9951fe420d4fc 296 SUPERFAMILY SSF51730 21 293 2.75E-93 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SAMA_RS16515 cff3195be21163eb98e9951fe420d4fc 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 2.1E-101 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS16515 cff3195be21163eb98e9951fe420d4fc 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 1.8E-102 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 SUPERFAMILY SSF82171 398 619 1.92E-29 T 22-04-2016 SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 SUPERFAMILY SSF82171 183 293 1.92E-29 T 22-04-2016 SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 SMART SM00862 34 111 2.8E-4 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 Gene3D G3DSA:1.10.10.10 13 112 3.6E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 Pfam PF07676 WD40-like Beta Propeller Repeat 172 196 4.9E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 Gene3D G3DSA:2.120.10.30 172 388 8.0E-23 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 Gene3D G3DSA:2.120.10.30 413 635 5.9E-24 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 SUPERFAMILY SSF46894 13 112 1.05E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS02955 123b56aee0678bbb2fef940953eadef7 702 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 111 8.2E-5 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 Pfam PF01266 FAD dependent oxidoreductase 37 391 9.2E-50 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 PANTHER PTHR13847 1 435 3.5E-154 T 22-04-2016 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 PANTHER PTHR13847:SF196 1 435 3.5E-154 T 22-04-2016 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 SUPERFAMILY SSF51905 36 261 1.62E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 SUPERFAMILY SSF51905 353 417 1.62E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 Gene3D G3DSA:3.50.50.60 26 126 6.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 Gene3D G3DSA:3.50.50.60 353 408 6.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS13870 d2f244cd34bff41c6293fff3884af88a 435 Gene3D G3DSA:3.50.50.60 180 260 6.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 6.7E-66 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 Pfam PF00692 dUTPase 74 175 3.1E-9 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 SUPERFAMILY SSF51283 1 193 3.01E-59 T 22-04-2016 IPR029054 dUTPase-like SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 PANTHER PTHR11241:SF1 77 192 1.8E-63 T 22-04-2016 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 PANTHER PTHR11241:SF1 1 58 1.8E-63 T 22-04-2016 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 33.388 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 PANTHER PTHR11241 77 192 1.8E-63 T 22-04-2016 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 PANTHER PTHR11241 1 58 1.8E-63 T 22-04-2016 SAMA_RS10670 3a5da4fe624cac3470efad68895a867e 194 Gene3D G3DSA:2.70.40.10 1 192 1.6E-60 T 22-04-2016 IPR029054 dUTPase-like SAMA_RS11165 fee89d781d544b28ee0c4c12b744653e 181 Pfam PF04279 Intracellular septation protein A 1 174 6.7E-68 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SAMA_RS11165 fee89d781d544b28ee0c4c12b744653e 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 4.4E-64 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SAMA_RS11165 fee89d781d544b28ee0c4c12b744653e 181 PANTHER PTHR36917 1 179 6.0E-73 T 22-04-2016 SAMA_RS11165 fee89d781d544b28ee0c4c12b744653e 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.786 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SAMA_RS11165 fee89d781d544b28ee0c4c12b744653e 181 PANTHER PTHR36917:SF1 1 179 6.0E-73 T 22-04-2016 SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 PANTHER PTHR22936:SF18 11 170 2.5E-60 T 22-04-2016 SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 PANTHER PTHR22936 11 170 2.5E-60 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 SUPERFAMILY SSF144091 6 179 1.83E-25 T 22-04-2016 SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 20 171 1.7E-52 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 Gene3D G3DSA:1.20.1540.10 6 175 1.3E-15 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS09545 8e344cc84e05318a4b4c41ba4ce316cd 187 Pfam PF01694 Rhomboid family 31 176 3.1E-10 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 151 1.9E-11 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 4 165 4.6E-105 T 22-04-2016 IPR019883 Lactoylglutathione lyase SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 SUPERFAMILY SSF54593 5 156 4.97E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 PANTHER PTHR21366:SF16 6 162 1.7E-87 T 22-04-2016 SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 Gene3D G3DSA:3.10.180.10 5 165 1.2E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS01480 b2cec9ab51f86c1bf472e1d6379956fa 167 PANTHER PTHR21366 6 162 1.7E-87 T 22-04-2016 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 ProSitePatterns PS00938 Initiation factor 3 signature. 49 62 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 74 159 1.4E-39 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 PANTHER PTHR10938 4 161 2.8E-68 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 SUPERFAMILY SSF55200 74 161 1.57E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 Gene3D G3DSA:3.10.20.80 4 69 1.1E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 161 28.214 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 SUPERFAMILY SSF54364 4 69 8.89E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 Gene3D G3DSA:3.30.110.10 70 161 1.6E-42 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 4 67 7.1E-26 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SAMA_RS09215 fb1d8d4fad55788e3c32abffd53392d3 161 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 5 161 2.2E-68 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 Pfam PF00924 Mechanosensitive ion channel 844 1042 2.1E-56 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 SUPERFAMILY SSF82689 954 1054 4.97E-23 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 Gene3D G3DSA:3.30.70.100 955 1040 1.2E-15 T 22-04-2016 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 916 950 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 447 783 2.9E-95 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 PANTHER PTHR30347 18 1065 0.0 T 22-04-2016 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 SUPERFAMILY SSF82861 802 885 5.89E-7 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 SUPERFAMILY SSF50182 887 952 5.23E-17 T 22-04-2016 IPR010920 LSM domain SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 PANTHER PTHR30347:SF0 18 1065 0.0 T 22-04-2016 SAMA_RS15855 b284f321ba317c1ef6835b67f395652c 1067 Gene3D G3DSA:2.30.30.60 902 951 1.3E-17 T 22-04-2016 SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 191 213 0.11 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 266 298 760.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 214 235 330.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 102 137 7800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 360 384 640.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 236 257 160.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 308 330 1100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SMART SM00710 138 160 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 SUPERFAMILY SSF51126 63 437 8.43E-38 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 208 250 1.4E-6 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 Gene3D G3DSA:2.160.20.10 66 328 4.1E-20 T 22-04-2016 IPR012334 Pectin lyase fold SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 Gene3D G3DSA:2.160.20.10 360 375 4.1E-20 T 22-04-2016 IPR012334 Pectin lyase fold SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 Pfam PF13229 Right handed beta helix region 131 318 8.0E-12 T 22-04-2016 SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 68 403 1.4E-131 T 22-04-2016 IPR022442 Parallel beta-helix repeat-containing domain SAMA_RS11060 0ff57cc9715379fc0eb666cd17975741 882 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 542 875 3.4E-129 T 22-04-2016 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family SAMA_RS17045 b2f644a1d021fa42efaa0599c769c5b0 85 PANTHER PTHR38040:SF1 2 82 1.3E-33 T 22-04-2016 SAMA_RS17045 b2f644a1d021fa42efaa0599c769c5b0 85 Pfam PF04380 Membrane fusogenic activity 1 78 2.5E-27 T 22-04-2016 IPR007475 Membrane fusogenic activity SAMA_RS17045 b2f644a1d021fa42efaa0599c769c5b0 85 PANTHER PTHR38040 2 82 1.3E-33 T 22-04-2016 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 Gene3D G3DSA:2.40.170.20 156 713 5.0E-61 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 PANTHER PTHR32552:SF0 13 713 5.6E-74 T 22-04-2016 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 Pfam PF00593 TonB dependent receptor 468 711 1.5E-15 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 PANTHER PTHR32552 13 713 5.6E-74 T 22-04-2016 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 154 8.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 Gene3D G3DSA:2.170.130.10 29 155 1.2E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07265 561e5c117bce3704073fc41021df6dda 713 SUPERFAMILY SSF56935 30 713 1.47E-89 T 22-04-2016 SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 Gene3D G3DSA:3.40.50.720 4 113 2.9E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 SUPERFAMILY SSF51735 102 287 1.76E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 286 3.8E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 PANTHER PTHR10996:SF91 10 316 4.2E-103 T 22-04-2016 SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 PANTHER PTHR10996 10 316 4.2E-103 T 22-04-2016 SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 Gene3D G3DSA:3.40.50.720 114 289 1.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 SUPERFAMILY SSF52283 4 137 9.26E-28 T 22-04-2016 SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS14690 2814ce35863a6dba68adc785758a4b51 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 314 6.4E-26 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 PANTHER PTHR10681:SF107 1 177 1.5E-58 T 22-04-2016 SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 PANTHER PTHR10681 1 177 1.5E-58 T 22-04-2016 SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 SUPERFAMILY SSF52833 41 176 1.09E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 Gene3D G3DSA:3.40.30.10 8 173 1.8E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 172 7.9E-56 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 SAMA_RS01300 2a8a26e88970a22b54742e0d27c356f7 195 Pfam PF08534 Redoxin 36 161 2.1E-16 T 22-04-2016 IPR013740 Redoxin GO:0016491 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PANTHER PTHR22807 181 454 3.2E-57 T 22-04-2016 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 Gene3D G3DSA:3.40.50.150 250 453 4.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 SUPERFAMILY SSF53335 171 454 1.18E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 Pfam PF01189 16S rRNA methyltransferase RsmB/F 261 451 4.8E-40 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 Gene3D G3DSA:3.30.70.1170 198 248 2.3E-4 T 22-04-2016 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 254 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 388 404 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 436 453 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 269 279 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS05690 141baee656c3e1df4d5b96be6a39d0d1 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 338 350 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS00450 0069553f398073485aef0d96d29b4e3d 178 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 167 15.918 T 22-04-2016 IPR007336 Der GTPase activator SAMA_RS00450 0069553f398073485aef0d96d29b4e3d 178 Pfam PF04220 Der GTPase activator (YihI) 26 164 1.4E-43 T 22-04-2016 IPR007336 Der GTPase activator SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 PANTHER PTHR32303:SF8 8 385 4.9E-142 T 22-04-2016 SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 394 39.072 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 Gene3D G3DSA:2.140.10.10 8 392 9.3E-74 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 PANTHER PTHR32303 8 385 4.9E-142 T 22-04-2016 SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SUPERFAMILY SSF50998 42 385 1.35E-80 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 392 1.3E-132 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 290 322 81.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 201 233 300.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 332 363 0.18 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 253 284 17.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 157 188 0.01 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 64 95 3.3E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 SMART SM00564 117 148 0.39 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SAMA_RS12355 2edd4ca55eef09fbce9f8c9f2635dfee 395 Pfam PF13360 PQQ-like domain 77 320 8.7E-57 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 SUPERFAMILY SSF46785 2 82 8.52E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 PANTHER PTHR38768 1 205 1.6E-80 T 22-04-2016 SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 Gene3D G3DSA:1.10.10.10 93 162 2.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 Gene3D G3DSA:1.10.10.10 2 85 6.3E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 Hamap MF_01584 UPF0502 protein YceH [yceH]. 3 207 34.331 T 22-04-2016 IPR007432 Protein of unknown function DUF480 SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 PANTHER PTHR38768:SF1 1 205 1.6E-80 T 22-04-2016 SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 Pfam PF04337 Protein of unknown function, DUF480 3 155 1.1E-66 T 22-04-2016 IPR007432 Protein of unknown function DUF480 SAMA_RS10275 b0f4836a08cfcbb6c4ef87b6ee6c7510 210 SUPERFAMILY SSF46785 88 163 3.17E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 Pfam PF13673 Acetyltransferase (GNAT) domain 30 143 2.7E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 Pfam PF13673 Acetyltransferase (GNAT) domain 204 307 3.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 Gene3D G3DSA:3.40.630.30 1 157 6.6E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 Gene3D G3DSA:3.40.630.30 161 316 4.0E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 PANTHER PTHR23091 36 192 1.1E-14 T 22-04-2016 SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 SUPERFAMILY SSF55729 158 314 2.9E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19175 b6cca3e5531fae83359064e1789dead5 320 SUPERFAMILY SSF55729 1 157 2.5E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 SUPERFAMILY SSF46689 5 79 3.24E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 PANTHER PTHR30055 6 192 5.1E-41 T 22-04-2016 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 Gene3D G3DSA:1.10.357.10 6 192 7.3E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 PANTHER PTHR30055:SF66 6 192 5.1E-41 T 22-04-2016 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 4.5E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS14915 897d8291ed15bc2ca3ab8d61740d7ed2 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS17640 16b37e841580333d745edba0cc436bda 222 Pfam PF11659 Protein of unknown function (DUF3261) 12 196 3.2E-51 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 PIRSF PIRSF001267 21 515 8.0E-171 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 Gene3D G3DSA:3.30.420.150 153 323 7.9E-42 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 PANTHER PTHR30005 3 522 2.1E-182 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 PANTHER PTHR30005:SF4 3 522 2.1E-182 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 SUPERFAMILY SSF109604 329 506 2.2E-40 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 SUPERFAMILY SSF53067 29 148 4.21E-31 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 Gene3D G3DSA:3.30.420.40 24 148 1.6E-39 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 SUPERFAMILY SSF53067 155 322 3.89E-37 T 22-04-2016 SAMA_RS10500 0e0a1aa9b8bb65450aef2da94a38198e 523 Pfam PF02541 Ppx/GppA phosphatase family 44 322 2.3E-69 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 6 341 35.042 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 PANTHER PTHR21712:SF4 4 341 1.2E-110 T 22-04-2016 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 PANTHER PTHR21712 4 341 1.2E-110 T 22-04-2016 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 Pfam PF02277 Phosphoribosyltransferase 4 339 7.2E-124 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 9 339 2.0E-126 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 Gene3D G3DSA:1.10.1610.10 2 65 1.3E-26 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 Gene3D G3DSA:3.40.50.10210 66 322 3.3E-105 T 22-04-2016 SAMA_RS04005 a6332389db35e2ad268de29e6e297f47 344 SUPERFAMILY SSF52733 2 340 8.11E-115 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF50249 605 693 2.57E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Gene3D G3DSA:2.40.50.140 617 693 1.1E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Gene3D G3DSA:3.30.1370.10 551 616 9.9E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 PANTHER PTHR11252 1 692 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF54211 292 487 3.09E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Gene3D G3DSA:1.10.10.400 225 312 1.9E-24 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF00575 S1 RNA binding domain 618 689 6.8E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF54211 3 143 1.67E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Gene3D G3DSA:3.30.230.70 313 541 2.1E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Gene3D G3DSA:3.30.230.70 3 224 8.2E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 2.3E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF03725 3' exoribonuclease family, domain 2 460 526 4.7E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF54791 553 621 1.29E-16 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF46915 238 319 6.02E-18 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF00013 KH domain 555 613 1.1E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 4.1E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.39 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SMART SM00322 551 616 3.6E-10 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 9.8E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 2.5E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF55666 144 235 3.93E-29 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 PIRSF PIRSF005499 1 699 9.3E-296 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SUPERFAMILY SSF55666 449 547 6.73E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SAMA_RS05055 5bcbe2ba840ad9fd141b60054f210be1 699 SMART SM00316 619 689 2.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS17810 0c0deced175c6b44ab3480ee4ec21c1b 515 Pfam PF03806 AbgT putative transporter family 15 513 5.6E-196 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 SAMA_RS17810 0c0deced175c6b44ab3480ee4ec21c1b 515 PANTHER PTHR30282:SF1 1 513 1.3E-287 T 22-04-2016 SAMA_RS17810 0c0deced175c6b44ab3480ee4ec21c1b 515 PANTHER PTHR30282 1 513 1.3E-287 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 251 1.2E-22 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 313 461 7.5E-25 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 Gene3D G3DSA:3.30.420.40 3 254 3.0E-29 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 PIRSF PIRSF000538 4 512 3.1E-78 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 SUPERFAMILY SSF53067 6 258 1.81E-36 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 PANTHER PTHR10196:SF65 1 510 7.7E-91 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 SUPERFAMILY SSF53067 259 508 2.92E-48 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 Gene3D G3DSA:3.30.420.40 293 509 2.0E-42 T 22-04-2016 SAMA_RS10320 fdc0796d977da2b53d8d9cf6649e4c1d 512 PANTHER PTHR10196 1 510 7.7E-91 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 Gene3D G3DSA:3.30.70.270 209 367 6.3E-52 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 Pfam PF17178 Membrane-associated sensor 23 205 2.7E-45 T 22-04-2016 IPR033444 Membrane-associated sensor MASE5 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 364 1.1E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 PANTHER PTHR10799:SF750 239 364 7.2E-28 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 SUPERFAMILY SSF55073 211 367 5.81E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 PANTHER PTHR10799 239 364 7.2E-28 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 PANTHER PTHR10799 58 207 7.2E-28 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 PANTHER PTHR10799:SF750 58 207 7.2E-28 T 22-04-2016 SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 SMART SM00267 195 369 4.0E-63 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03290 69956ac784b4c8d1e7f4fd41cabede3f 378 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 204 367 6.7E-49 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 PANTHER PTHR18895 12 292 5.2E-156 T 22-04-2016 SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 3.1E-100 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 PIRSF PIRSF000401 1 294 2.2E-92 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 SUPERFAMILY SSF53335 49 285 9.77E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.492 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.1E-99 T 22-04-2016 SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 Gene3D G3DSA:3.40.50.150 98 285 8.2E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16790 fdceae86899a9e8e6f75ceddaa2715d0 295 PANTHER PTHR18895:SF69 12 292 5.2E-156 T 22-04-2016 SAMA_RS06700 279582bb44af46a44abd23dda574bd53 71 Gene3D G3DSA:1.10.720.30 18 71 9.4E-27 T 22-04-2016 IPR003034 SAP domain SAMA_RS06700 279582bb44af46a44abd23dda574bd53 71 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 11 71 3.4E-31 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 PANTHER PTHR11907 1 477 1.3E-257 T 22-04-2016 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 PIRSF PIRSF000485 1 480 1.8E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 Gene3D G3DSA:3.60.20.10 2 257 4.9E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 Pfam PF00156 Phosphoribosyl transferase domain 279 392 1.1E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 4.5E-164 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.95 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 Gene3D G3DSA:3.40.50.2020 270 443 7.0E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 9.7E-17 T 22-04-2016 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 PANTHER PTHR11907:SF0 1 477 1.3E-257 T 22-04-2016 SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 SUPERFAMILY SSF56235 2 256 1.72E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS11215 e8ed68cbecd8b82589bcc43f3be13956 504 SUPERFAMILY SSF53271 249 482 7.08E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 SUPERFAMILY SSF55298 4 126 2.83E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 PANTHER PTHR11803 1 127 3.2E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 Gene3D G3DSA:3.30.1330.40 4 123 6.9E-49 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 2.5E-51 T 22-04-2016 IPR006056 RidA family SAMA_RS01420 e43ed3494f0f308df480189e6fcd7426 127 Pfam PF01042 Endoribonuclease L-PSP 10 125 1.4E-41 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 Gene3D G3DSA:3.10.310.10 1 123 3.9E-46 T 22-04-2016 SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 Pfam PF02567 Phenazine biosynthesis-like protein 8 254 7.1E-58 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 PIRSF PIRSF016184 1 259 1.7E-57 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 225 5.9E-36 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 PANTHER PTHR13774:SF17 1 263 1.7E-103 T 22-04-2016 SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 SUPERFAMILY SSF54506 1 259 2.2E-86 T 22-04-2016 SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 Gene3D G3DSA:3.10.310.10 124 247 1.2E-44 T 22-04-2016 SAMA_RS14100 d2ee52e9e7cfb3295252dd2155a3a39c 264 PANTHER PTHR13774 1 263 1.7E-103 T 22-04-2016 SAMA_RS16535 7c42e2fd6f1cf6bc05b5ab9fb8f9e43e 245 PANTHER PTHR30269:SF14 6 243 3.6E-21 T 22-04-2016 SAMA_RS16535 7c42e2fd6f1cf6bc05b5ab9fb8f9e43e 245 Pfam PF01925 Sulfite exporter TauE/SafE 11 233 4.9E-21 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS16535 7c42e2fd6f1cf6bc05b5ab9fb8f9e43e 245 PANTHER PTHR30269 6 243 3.6E-21 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 PIRSF PIRSF003107 7 227 1.5E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 Gene3D G3DSA:1.20.58.220 127 234 1.0E-30 T 22-04-2016 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 PANTHER PTHR10010 1 236 1.3E-91 T 22-04-2016 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 SUPERFAMILY SSF109755 13 233 3.24E-69 T 22-04-2016 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 Pfam PF01895 PhoU domain 128 213 4.1E-15 T 22-04-2016 IPR026022 PhoU domain SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 Pfam PF01895 PhoU domain 27 112 1.4E-20 T 22-04-2016 IPR026022 PhoU domain SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 Gene3D G3DSA:1.20.58.220 9 117 6.5E-37 T 22-04-2016 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 222 1.6E-73 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SAMA_RS07350 b10e06d7c092115a9b83a390752f2bc0 236 PANTHER PTHR10010:SF14 1 236 1.3E-91 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 SUPERFAMILY SSF53167 5 247 9.16E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 6.1E-112 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 PANTHER PTHR21234:SF22 1 251 1.8E-186 T 22-04-2016 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 Pfam PF01048 Phosphorylase superfamily 19 237 4.3E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 PANTHER PTHR21234 1 251 1.8E-186 T 22-04-2016 IPR018017 Nucleoside phosphorylase SAMA_RS02225 bcfc887a1e044b3408d2db5ffccec8bc 252 Gene3D G3DSA:3.40.50.1580 4 250 1.6E-81 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SAMA_RS12505 7e88383d6d83e6d07d769eb0a0bbf224 501 PANTHER PTHR10283:SF43 84 341 9.8E-75 T 22-04-2016 SAMA_RS12505 7e88383d6d83e6d07d769eb0a0bbf224 501 PANTHER PTHR10283:SF43 358 489 9.8E-75 T 22-04-2016 SAMA_RS12505 7e88383d6d83e6d07d769eb0a0bbf224 501 PANTHER PTHR10283 84 341 9.8E-75 T 22-04-2016 SAMA_RS12505 7e88383d6d83e6d07d769eb0a0bbf224 501 PANTHER PTHR10283 358 489 9.8E-75 T 22-04-2016 SAMA_RS12505 7e88383d6d83e6d07d769eb0a0bbf224 501 Pfam PF03606 C4-dicarboxylate anaerobic carrier 25 496 2.1E-110 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 PANTHER PTHR13847 233 553 3.1E-91 T 22-04-2016 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 PANTHER PTHR13847 576 639 3.1E-91 T 22-04-2016 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 PANTHER PTHR13847:SF182 233 553 3.1E-91 T 22-04-2016 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 PANTHER PTHR13847:SF182 576 639 3.1E-91 T 22-04-2016 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 Pfam PF01266 FAD dependent oxidoreductase 234 605 9.0E-57 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 Gene3D G3DSA:3.50.50.60 565 614 7.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 Gene3D G3DSA:3.50.50.60 232 312 7.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 Gene3D G3DSA:3.50.50.60 365 445 7.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 SUPERFAMILY SSF51905 579 632 1.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 SUPERFAMILY SSF51905 539 550 1.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 SUPERFAMILY SSF51905 234 446 1.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19160 cfb640cbda3d553eee309996c86aaaf3 639 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 234 635 5.3E-145 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 SUPERFAMILY SSF55205 2 417 1.59E-148 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 Gene3D G3DSA:3.65.10.10 221 416 2.5E-62 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 PANTHER PTHR21090 1 417 1.4E-212 T 22-04-2016 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 Gene3D G3DSA:3.65.10.10 21 220 2.7E-72 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.4E-117 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 47.043 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS16045 86a4b1a08c98763dce489dde0657ff21 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 415 4.6E-182 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 PANTHER PTHR30126 5 295 1.5E-112 T 22-04-2016 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 SUPERFAMILY SSF53850 92 293 2.53E-26 T 22-04-2016 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 PANTHER PTHR30126:SF4 5 295 1.5E-112 T 22-04-2016 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 Gene3D G3DSA:1.10.10.10 5 90 3.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 Gene3D G3DSA:3.40.190.10 97 178 1.5E-4 T 22-04-2016 SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 SUPERFAMILY SSF46785 5 102 4.28E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 Pfam PF03466 LysR substrate binding domain 92 290 3.1E-22 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS07235 937e89615bb242219cc6e4dd5179cf10 297 Gene3D G3DSA:3.40.190.10 179 258 2.8E-8 T 22-04-2016 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 SUPERFAMILY SSF56935 375 847 5.8E-107 T 22-04-2016 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 SUPERFAMILY SSF56935 47 320 5.8E-107 T 22-04-2016 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 183 9.7E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 Gene3D G3DSA:2.40.170.20 187 322 1.4E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 Gene3D G3DSA:2.40.170.20 370 847 1.4E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 PANTHER PTHR30069:SF4 23 728 4.3E-76 T 22-04-2016 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 PANTHER PTHR30069 23 728 4.3E-76 T 22-04-2016 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 Gene3D G3DSA:2.170.130.10 61 186 8.5E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15125 42dc383b8ea35dccd63d3fdbeb3e17a7 847 Pfam PF00593 TonB dependent receptor 547 846 6.0E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 5.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 291 309 5.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 SUPERFAMILY SSF52540 222 385 3.39E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 Hamap MF_00900 GTPase HflX [hflX]. 31 412 41.039 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 Pfam PF16360 GTP-binding GTPase Middle Region 143 218 2.2E-17 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PANTHER PTHR10229:SF0 3 82 2.0E-113 T 22-04-2016 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PANTHER PTHR10229:SF0 100 440 2.0E-113 T 22-04-2016 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PANTHER PTHR10229 3 82 2.0E-113 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PANTHER PTHR10229 100 440 2.0E-113 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 Gene3D G3DSA:3.40.50.300 222 384 2.6E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 Pfam PF01926 50S ribosome-binding GTPase 224 342 6.3E-18 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 PIRSF PIRSF006809 4 442 3.8E-134 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 Pfam PF13167 GTP-binding GTPase N-terminal 28 140 4.8E-21 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SAMA_RS03945 eacac52721c5b85e422e578b8bc99431 443 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 98 381 7.1E-94 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 429 9.9E-25 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 9.9E-25 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 383 9.9E-25 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 352 360 9.9E-25 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 410 9.9E-25 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 352 360 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 TIGRFAM TIGR03356 BGL: beta-galactosidase 17 439 6.2E-178 T 22-04-2016 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7089|MetaCyc: PWY-7091|MetaCyc: PWY-7092 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 Pfam PF00232 Glycosyl hydrolase family 1 16 444 5.7E-142 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PANTHER PTHR10353 18 444 6.7E-175 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 SUPERFAMILY SSF51445 16 443 1.14E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 PANTHER PTHR10353:SF36 18 444 6.7E-175 T 22-04-2016 SAMA_RS07305 45effa9f07d838a6945e17692ce1d1ac 452 Gene3D G3DSA:3.20.20.80 16 443 3.4E-146 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 PANTHER PTHR30465 194 337 1.3E-103 T 22-04-2016 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 PANTHER PTHR30465 1 169 1.3E-103 T 22-04-2016 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 PANTHER PTHR30465:SF0 194 337 1.3E-103 T 22-04-2016 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 PANTHER PTHR30465:SF0 1 169 1.3E-103 T 22-04-2016 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 Gene3D G3DSA:1.10.3720.10 203 327 4.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 Gene3D G3DSA:1.10.3720.10 90 163 4.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 SUPERFAMILY SSF161098 92 160 1.29E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 SUPERFAMILY SSF161098 200 322 1.29E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS06470 a1245e379295ecff789f169acae9e634 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 3.4E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS17090 f3584bceb568e05555ee5d2ec1390dd5 83 Pfam PF13710 ACT domain 11 70 1.9E-23 T 22-04-2016 SAMA_RS17090 f3584bceb568e05555ee5d2ec1390dd5 83 Gene3D G3DSA:3.30.70.260 1 71 1.5E-10 T 22-04-2016 SAMA_RS17090 f3584bceb568e05555ee5d2ec1390dd5 83 SUPERFAMILY SSF55021 3 72 1.25E-11 T 22-04-2016 SAMA_RS09490 8f372477d45a4f62d9f4af7d5d094822 187 SUPERFAMILY SSF54427 24 164 2.51E-18 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS09490 8f372477d45a4f62d9f4af7d5d094822 187 Pfam PF14534 Domain of unknown function (DUF4440) 31 149 3.2E-7 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 SAMA_RS09490 8f372477d45a4f62d9f4af7d5d094822 187 Gene3D G3DSA:3.10.450.50 21 150 8.1E-7 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 Pfam PF07690 Major Facilitator Superfamily 28 344 2.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 101 394 2.6E-108 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 Gene3D G3DSA:1.20.1250.20 220 394 7.6E-9 T 22-04-2016 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 PANTHER PTHR23514:SF7 7 400 2.0E-122 T 22-04-2016 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 Gene3D G3DSA:1.20.1250.20 22 207 1.3E-20 T 22-04-2016 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 PANTHER PTHR23514 7 400 2.0E-122 T 22-04-2016 SAMA_RS01575 a359977d03f17b96229dfbdab5bcf4d1 412 SUPERFAMILY SSF103473 15 397 1.44E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS15865 6b5e5f093b47fc2cbbab103ff32579b2 110 Pfam PF11872 Protein of unknown function (DUF3392) 4 107 7.8E-38 T 22-04-2016 IPR021813 Protein of unknown function DUF3392 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 PANTHER PTHR24423 174 438 5.7E-60 T 22-04-2016 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 PANTHER PTHR24423 4 15 5.7E-60 T 22-04-2016 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SUPERFAMILY SSF47384 217 292 1.84E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 438 1.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 291 4.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SMART SM00304 180 232 4.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 Pfam PF00672 HAMP domain 163 228 1.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 Gene3D G3DSA:1.10.287.130 223 287 3.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SMART SM00388 233 293 1.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SUPERFAMILY SSF55874 300 437 5.24E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SMART SM00387 331 438 4.5E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 Gene3D G3DSA:3.30.565.10 303 437 7.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18255 8117291bd95356385d83d912b9aaf5ae 438 SUPERFAMILY SSF158472 180 228 8.76E-5 T 22-04-2016 SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 Pfam PF00990 Diguanylate cyclase, GGDEF domain 76 224 1.7E-22 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 Gene3D G3DSA:3.30.70.270 76 238 3.1E-27 T 22-04-2016 SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 SMART SM00052 240 486 7.3E-81 T 22-04-2016 IPR001633 EAL domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 PANTHER PTHR33121 193 493 1.6E-61 T 22-04-2016 SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 Pfam PF00563 EAL domain 247 481 2.4E-64 T 22-04-2016 IPR001633 EAL domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 70 225 8.6E-16 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 Gene3D G3DSA:3.20.20.450 244 493 4.6E-80 T 22-04-2016 IPR001633 EAL domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 SMART SM00267 63 230 5.9E-16 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 SUPERFAMILY SSF141868 247 493 5.23E-76 T 22-04-2016 IPR001633 EAL domain SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 PANTHER PTHR33121:SF13 193 493 1.6E-61 T 22-04-2016 SAMA_RS18705 0c625733aab73b07abc9bec4dd101d7a 502 SUPERFAMILY SSF55073 79 225 8.63E-24 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 Gene3D G3DSA:1.20.1510.10 218 280 9.7E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 Gene3D G3DSA:1.20.1510.10 30 163 9.7E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 Pfam PF01545 Cation efflux family 34 281 1.4E-38 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 PANTHER PTHR11562 208 362 8.9E-143 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 PANTHER PTHR11562 11 165 8.9E-143 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 PANTHER PTHR11562:SF40 208 362 8.9E-143 T 22-04-2016 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 PANTHER PTHR11562:SF40 11 165 8.9E-143 T 22-04-2016 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 SUPERFAMILY SSF161111 27 159 1.12E-44 T 22-04-2016 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 SUPERFAMILY SSF161111 214 282 1.12E-44 T 22-04-2016 SAMA_RS09150 8d0b38e88e826f664045848cee2efff0 365 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 30 356 5.0E-60 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS04790 ad2c1436d8b9a76bc41b3e473b9dc921 257 Pfam PF03883 Protein of unknown function (DUF328) 1 243 7.9E-88 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SAMA_RS04790 ad2c1436d8b9a76bc41b3e473b9dc921 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.254 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SAMA_RS04790 ad2c1436d8b9a76bc41b3e473b9dc921 257 PANTHER PTHR30283:SF3 2 257 3.3E-115 T 22-04-2016 SAMA_RS04790 ad2c1436d8b9a76bc41b3e473b9dc921 257 PANTHER PTHR30283 2 257 3.3E-115 T 22-04-2016 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 SUPERFAMILY SSF52151 3 303 7.32E-59 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 Pfam PF01734 Patatin-like phospholipase 26 217 2.1E-26 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 PANTHER PTHR14226:SF37 15 112 8.2E-97 T 22-04-2016 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 PANTHER PTHR14226:SF37 128 451 8.2E-97 T 22-04-2016 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 PANTHER PTHR14226 15 112 8.2E-97 T 22-04-2016 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 PANTHER PTHR14226 128 451 8.2E-97 T 22-04-2016 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 Pfam PF07244 Surface antigen variable number repeat 340 396 4.1E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SAMA_RS02060 fd103b7ff3240103ec109dbd9a6a9a5c 734 Gene3D G3DSA:3.40.1090.10 26 216 8.9E-13 T 22-04-2016 SAMA_RS11220 906316997678dd01e5c01f77c80262bd 162 PANTHER PTHR36926:SF1 1 162 1.4E-80 T 22-04-2016 SAMA_RS11220 906316997678dd01e5c01f77c80262bd 162 PANTHER PTHR36926 1 162 1.4E-80 T 22-04-2016 SAMA_RS11220 906316997678dd01e5c01f77c80262bd 162 Pfam PF02674 Colicin V production protein 4 141 6.4E-39 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SAMA_RS00360 ec4e36a482239c3067b094af85e8b62f 79 PANTHER PTHR31435 3 79 3.2E-22 T 22-04-2016 SAMA_RS00360 ec4e36a482239c3067b094af85e8b62f 79 Pfam PF14542 GCN5-related N-acetyl-transferase 18 79 5.0E-20 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase SAMA_RS00360 ec4e36a482239c3067b094af85e8b62f 79 SUPERFAMILY SSF55729 3 77 3.6E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS00360 ec4e36a482239c3067b094af85e8b62f 79 Gene3D G3DSA:3.40.630.30 3 79 9.9E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17970 b8ed1bed8850aef82af80c60e427da1c 274 Gene3D G3DSA:1.10.3150.10 5 264 5.9E-71 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS17970 b8ed1bed8850aef82af80c60e427da1c 274 PANTHER PTHR33525 6 243 3.8E-59 T 22-04-2016 SAMA_RS17970 b8ed1bed8850aef82af80c60e427da1c 274 PANTHER PTHR33525:SF3 6 243 3.8E-59 T 22-04-2016 SAMA_RS17970 b8ed1bed8850aef82af80c60e427da1c 274 SUPERFAMILY SSF109604 5 265 2.02E-63 T 22-04-2016 SAMA_RS17970 b8ed1bed8850aef82af80c60e427da1c 274 Pfam PF08668 HDOD domain 13 204 2.5E-54 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Pfam PF02225 PA domain 342 414 1.1E-9 T 22-04-2016 IPR003137 PA domain SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 SUPERFAMILY SSF54897 33 92 1.62E-5 T 22-04-2016 IPR009020 Proteinase inhibitor, propeptide SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 162 172 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 125 136 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Gene3D G3DSA:3.50.30.30 300 426 1.6E-31 T 22-04-2016 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Gene3D G3DSA:3.40.50.200 430 497 3.3E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Gene3D G3DSA:3.40.50.200 103 299 3.3E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PANTHER PTHR10795 434 497 4.6E-60 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PANTHER PTHR10795 1 314 4.6E-60 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PANTHER PTHR10795:SF419 434 497 4.6E-60 T 22-04-2016 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PANTHER PTHR10795:SF419 1 314 4.6E-60 T 22-04-2016 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 435 451 2.7E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 158 171 2.7E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 120 139 2.7E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 436 446 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 SUPERFAMILY SSF52743 102 497 3.05E-84 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Pfam PF00082 Subtilase family 419 486 2.3E-12 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Pfam PF00082 Subtilase family 124 311 9.9E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS12610 5bcf21e23e3e506091a501a0d067b8ca 526 Gene3D G3DSA:3.30.70.80 26 99 1.5E-9 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 SMART SM00855 4 158 1.1E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 PANTHER PTHR23029 1 154 9.9E-36 T 22-04-2016 SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 Gene3D G3DSA:3.40.50.1240 1 174 2.0E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 SUPERFAMILY SSF53254 1 184 1.14E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 PANTHER PTHR23029:SF1 1 154 9.9E-36 T 22-04-2016 SAMA_RS02345 901f5554949a4c5848fab832f9ced1b6 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 173 8.0E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS14485 5a6a49441b2a070581c769d412bc5281 150 PANTHER PTHR23091 1 138 5.2E-18 T 22-04-2016 SAMA_RS14485 5a6a49441b2a070581c769d412bc5281 150 SUPERFAMILY SSF55729 1 139 5.23E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14485 5a6a49441b2a070581c769d412bc5281 150 Gene3D G3DSA:3.40.630.30 1 99 3.1E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14485 5a6a49441b2a070581c769d412bc5281 150 Pfam PF00583 Acetyltransferase (GNAT) family 55 137 9.4E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 Pfam PF00692 dUTPase 17 150 9.3E-39 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 Gene3D G3DSA:2.70.40.10 7 151 3.7E-52 T 22-04-2016 IPR029054 dUTPase-like SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 PANTHER PTHR11241 6 151 3.8E-50 T 22-04-2016 SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 SUPERFAMILY SSF51283 4 151 2.75E-53 T 22-04-2016 IPR029054 dUTPase-like SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 33.047 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SAMA_RS01745 f48fe4facaa48cf4908546427244c8ca 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 150 2.4E-47 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 Pfam PF00929 Exonuclease 20 194 1.2E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS10945 80142458ac3924725c44eade68712b87 238 Gene3D G3DSA:3.30.420.10 10 208 1.2E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 SMART SM00479 18 203 1.7E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS10945 80142458ac3924725c44eade68712b87 238 SUPERFAMILY SSF53098 10 207 1.57E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 PANTHER PTHR30231 13 233 4.9E-109 T 22-04-2016 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.5E-100 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 Hamap MF_00157 Ribonuclease T [rnt]. 1 238 120.97 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SAMA_RS10945 80142458ac3924725c44eade68712b87 238 PANTHER PTHR30231:SF2 13 233 4.9E-109 T 22-04-2016 SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 Gene3D G3DSA:3.40.30.10 2 84 1.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 Pfam PF00462 Glutaredoxin 3 69 1.0E-14 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 PRINTS PR00160 Glutaredoxin signature 66 79 2.7E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 PRINTS PR00160 Glutaredoxin signature 3 21 2.7E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 PRINTS PR00160 Glutaredoxin signature 52 65 2.7E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 SUPERFAMILY SSF52833 2 84 1.73E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 PANTHER PTHR10168 1 85 1.2E-45 T 22-04-2016 SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 PANTHER PTHR10168:SF85 1 85 1.2E-45 T 22-04-2016 SAMA_RS10845 25b31cd6db36f743883209452cabf923 86 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.1E-48 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 SUPERFAMILY SSF49785 542 714 2.3E-41 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 SUPERFAMILY SSF49785 719 881 4.25E-42 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Gene3D G3DSA:2.60.120.200 42 240 4.2E-81 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Gene3D G3DSA:2.60.120.200 279 327 4.2E-81 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 PANTHER PTHR10963 30 325 2.3E-55 T 22-04-2016 SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 SUPERFAMILY SSF49899 42 240 1.46E-73 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 SUPERFAMILY SSF49899 279 327 1.46E-73 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Pfam PF00722 Glycosyl hydrolases family 16 85 277 6.7E-28 T 22-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 SUPERFAMILY SSF49785 367 543 1.11E-34 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Gene3D G3DSA:2.60.120.360 603 712 2.0E-7 T 22-04-2016 SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Gene3D G3DSA:2.60.120.360 771 878 2.2E-6 T 22-04-2016 SAMA_RS07275 f52f5a4f6aeb66ae10522ac5e2db22d5 884 Gene3D G3DSA:2.60.120.360 433 538 1.4E-5 T 22-04-2016 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 PANTHER PTHR30477:SF11 19 297 2.8E-124 T 22-04-2016 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 298 1.8E-29 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 Gene3D G3DSA:3.40.50.1980 12 175 6.7E-23 T 22-04-2016 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 SUPERFAMILY SSF53807 21 299 1.28E-58 T 22-04-2016 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 PANTHER PTHR30477 19 297 2.8E-124 T 22-04-2016 SAMA_RS16380 2ce5b43edbe30bd35f283df93c9cda9c 301 Gene3D G3DSA:3.40.50.1980 195 298 1.6E-10 T 22-04-2016 SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 PANTHER PTHR23091:SF256 1 148 3.6E-41 T 22-04-2016 SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 SUPERFAMILY SSF55729 1 155 6.86E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 Pfam PF13673 Acetyltransferase (GNAT) domain 20 128 5.9E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 PANTHER PTHR23091 1 148 3.6E-41 T 22-04-2016 SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 Pfam PF11814 Peptidase_C39 like family 157 359 9.0E-77 T 22-04-2016 IPR021770 Protein of unknown function DUF3335 SAMA_RS06055 aa18509080131f7f70b0c4bb7587ab6b 365 Gene3D G3DSA:3.40.630.30 1 149 7.3E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 15 445 5.1E-128 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 9 569 33.198 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 402 4.4E-65 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 SUPERFAMILY SSF52518 6 183 2.01E-32 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Gene3D G3DSA:3.40.50.970 356 565 2.4E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 424 551 2.2E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 PIRSF PIRSF004983 6 572 3.0E-172 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Gene3D G3DSA:3.40.50.970 12 182 1.1E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 PANTHER PTHR18968 7 572 3.2E-192 T 22-04-2016 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 SUPERFAMILY SSF52518 374 569 1.05E-29 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 140 7.6E-28 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SAMA_RS17995 a0294f4d3950a24b688e48ee08877e3f 572 PANTHER PTHR18968:SF114 7 572 3.2E-192 T 22-04-2016 SAMA_RS09060 1e622babba630155448680148a44154f 100 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 18.453 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 SAMA_RS09060 1e622babba630155448680148a44154f 100 Pfam PF06305 Protein of unknown function (DUF1049) 24 84 7.1E-17 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 Gene3D G3DSA:3.20.20.70 5 288 1.6E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 SUPERFAMILY SSF51569 2 289 7.03E-74 T 22-04-2016 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 PANTHER PTHR10277 3 296 5.7E-180 T 22-04-2016 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 Pfam PF00682 HMGL-like 7 277 7.4E-57 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SAMA_RS07085 85c250cc9abd714c6a2d1f4dca903f84 296 PANTHER PTHR10277:SF40 3 296 5.7E-180 T 22-04-2016 SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 Gene3D G3DSA:2.40.50.100 7 129 7.1E-53 T 22-04-2016 SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 SUPERFAMILY SSF51230 3 128 1.09E-47 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 Pfam PF01597 Glycine cleavage H-protein 8 128 4.3E-49 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.595 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.3E-57 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 PANTHER PTHR11715 1 129 1.1E-77 T 22-04-2016 IPR002930 Glycine cleavage system H-protein SAMA_RS14235 72f28872410edbff308b31a5553e8ce7 129 PANTHER PTHR11715:SF12 1 129 1.1E-77 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Gene3D G3DSA:2.30.40.10 1002 1045 4.9E-34 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Gene3D G3DSA:2.30.40.10 649 710 4.9E-34 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Gene3D G3DSA:3.20.20.140 712 1000 2.1E-57 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF51338 653 709 9.91E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF51338 1002 1038 9.91E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF01979 Amidohydrolase family 974 1038 5.5E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 PANTHER PTHR11731:SF123 995 1027 4.5E-68 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 PANTHER PTHR11731:SF123 129 499 4.5E-68 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF51556 708 1003 2.18E-40 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF07676 WD40-like Beta Propeller Repeat 406 421 0.19 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF07676 WD40-like Beta Propeller Repeat 239 261 0.027 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF07676 WD40-like Beta Propeller Repeat 190 209 4.0E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF07676 WD40-like Beta Propeller Repeat 93 118 6.0E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Pfam PF07676 WD40-like Beta Propeller Repeat 539 558 0.17 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Gene3D G3DSA:2.120.10.60 45 336 2.0E-61 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF82171 225 332 8.63E-33 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF82171 369 559 8.63E-33 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 SUPERFAMILY SSF69304 53 342 3.79E-48 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 PANTHER PTHR11731 995 1027 4.5E-68 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 PANTHER PTHR11731 129 499 4.5E-68 T 22-04-2016 SAMA_RS00130 6da8e6cbb76251e1188fcfac5ade7477 1062 Gene3D G3DSA:2.120.10.30 362 609 6.7E-36 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.996 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 SUPERFAMILY SSF55811 7 159 6.5E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 Pfam PF00293 NUDIX domain 7 145 5.8E-25 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 Gene3D G3DSA:3.90.79.10 4 151 2.6E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS04515 ba56229598c44bccb6757f586e596fd5 172 PANTHER PTHR23114 1 165 4.1E-60 T 22-04-2016 SAMA_RS12965 a7dc9e002610810d012464a67ad6e2a1 625 PANTHER PTHR33361:SF4 14 615 6.9E-270 T 22-04-2016 SAMA_RS12965 a7dc9e002610810d012464a67ad6e2a1 625 Pfam PF05960 Bacterial protein of unknown function (DUF885) 69 611 8.3E-175 T 22-04-2016 IPR010281 Protein of unknown function DUF885 SAMA_RS12965 a7dc9e002610810d012464a67ad6e2a1 625 PANTHER PTHR33361 14 615 6.9E-270 T 22-04-2016 SAMA_RS06505 f541570f03b7fd6baa016f93a689e3e9 362 Pfam PF05128 Domain of unknown function (DUF697) 179 338 3.1E-53 T 22-04-2016 IPR021147 Protein of unknown function DUF697 SAMA_RS06505 f541570f03b7fd6baa016f93a689e3e9 362 PANTHER PTHR39342 5 353 3.3E-92 T 22-04-2016 SAMA_RS06505 f541570f03b7fd6baa016f93a689e3e9 362 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 80 338 1.0E-65 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 SAMA_RS06505 f541570f03b7fd6baa016f93a689e3e9 362 PANTHER PTHR39342:SF1 5 353 3.3E-92 T 22-04-2016 SAMA_RS09850 ceaf7daad61c287496733b86dcd03c75 156 Gene3D G3DSA:3.30.420.10 5 147 4.9E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09850 ceaf7daad61c287496733b86dcd03c75 156 SUPERFAMILY SSF53098 6 144 1.77E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09850 ceaf7daad61c287496733b86dcd03c75 156 Pfam PF00075 RNase H 6 144 1.3E-50 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SAMA_RS09850 ceaf7daad61c287496733b86dcd03c75 156 Hamap MF_00042 Ribonuclease H [rnhA]. 4 152 35.743 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 SAMA_RS09850 ceaf7daad61c287496733b86dcd03c75 156 PANTHER PTHR10642 6 145 2.7E-59 T 22-04-2016 SAMA_RS08930 4d97408ba1b3a87157bf093a2cb5f7fc 355 Pfam PF02445 Quinolinate synthetase A protein 32 342 1.1E-103 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SAMA_RS08930 4d97408ba1b3a87157bf093a2cb5f7fc 355 SUPERFAMILY SSF142754 29 343 6.41E-109 T 22-04-2016 SAMA_RS08930 4d97408ba1b3a87157bf093a2cb5f7fc 355 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 343 1.4E-117 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SAMA_RS08930 4d97408ba1b3a87157bf093a2cb5f7fc 355 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 349 68.559 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SAMA_RS08930 4d97408ba1b3a87157bf093a2cb5f7fc 355 PANTHER PTHR30573 11 354 9.1E-166 T 22-04-2016 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 PANTHER PTHR11102 250 264 3.3E-12 T 22-04-2016 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 PANTHER PTHR11102 67 174 3.3E-12 T 22-04-2016 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 Pfam PF08238 Sel1 repeat 165 176 2.6 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 Pfam PF08238 Sel1 repeat 78 111 0.074 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 Pfam PF08238 Sel1 repeat 113 145 0.19 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 SUPERFAMILY SSF81901 64 230 1.12E-19 T 22-04-2016 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 Gene3D G3DSA:1.25.40.10 57 186 6.6E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 Gene3D G3DSA:1.25.40.10 227 264 6.6E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 SMART SM00671 147 179 160.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 SMART SM00671 112 146 28.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS15170 8442def9d38bbcd667b171f515875a53 277 SMART SM00671 76 111 0.034 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 Pfam PF12019 Type II transport protein GspH 46 156 1.5E-20 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 SUPERFAMILY SSF54523 7 146 2.51E-21 T 22-04-2016 SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 5.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 Gene3D G3DSA:3.30.700.10 7 48 2.2E-5 T 22-04-2016 SAMA_RS04875 117d5c8435c12989f7666bb1aa877b1c 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.9E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS12940 7e9920479f6ca45d2420096a0fd6bfb6 182 PANTHER PTHR33219:SF5 1 174 3.0E-71 T 22-04-2016 SAMA_RS12940 7e9920479f6ca45d2420096a0fd6bfb6 182 PANTHER PTHR33219 1 174 3.0E-71 T 22-04-2016 SAMA_RS12940 7e9920479f6ca45d2420096a0fd6bfb6 182 Pfam PF02325 YGGT family 108 172 3.3E-20 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SAMA_RS12940 7e9920479f6ca45d2420096a0fd6bfb6 182 Pfam PF02325 YGGT family 9 79 8.6E-20 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 229 240 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 PANTHER PTHR30176 6 286 6.1E-76 T 22-04-2016 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 27 279 5.3E-106 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 SUPERFAMILY SSF54862 98 146 1.42E-18 T 22-04-2016 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 SUPERFAMILY SSF54862 194 284 1.42E-18 T 22-04-2016 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 Pfam PF12801 4Fe-4S binding domain 180 217 2.2E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 Pfam PF12801 4Fe-4S binding domain 87 130 1.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 PANTHER PTHR30176:SF2 6 286 6.1E-76 T 22-04-2016 SAMA_RS15575 2e8aa15b4b4076c997029d3f62eb194b 303 Gene3D G3DSA:3.30.70.20 194 286 3.1E-13 T 22-04-2016 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 SUPERFAMILY SSF46785 13 100 1.22E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 3.1E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 3.1E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 3.1E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 51 3.1E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 Pfam PF01022 Bacterial regulatory protein, arsR family 26 71 9.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 SMART SM00418 19 97 9.6E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PANTHER PTHR33154:SF10 1 100 3.7E-52 T 22-04-2016 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 PANTHER PTHR33154 1 100 3.7E-52 T 22-04-2016 SAMA_RS00175 5181564d52781ddfcc73a289925f9ddc 102 Gene3D G3DSA:1.10.10.10 7 101 4.2E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.9E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 Pfam PF00366 Ribosomal protein S17 10 76 5.5E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 1.0E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 7.0E-15 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 7.0E-15 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 7.0E-15 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 PANTHER PTHR10744 2 82 2.7E-46 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 SUPERFAMILY SSF50249 5 82 2.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 25.46 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01170 7161455531a8cc2779f808b02cd19c8b 82 Gene3D G3DSA:2.40.50.140 6 82 1.3E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 PANTHER PTHR10681 1 189 3.8E-96 T 22-04-2016 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 183 4.8E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 SUPERFAMILY SSF52833 6 188 8.87E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 PIRSF PIRSF000239 1 189 2.1E-54 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 PANTHER PTHR10681:SF121 1 189 3.8E-96 T 22-04-2016 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 189 1.1E-102 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 Pfam PF00578 AhpC/TSA family 11 134 7.5E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS03280 27f90b80736416c4dfae4a1ccffdcae6 189 Gene3D G3DSA:3.40.30.10 6 185 3.3E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 SUPERFAMILY SSF53850 94 294 5.27E-46 T 22-04-2016 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 SUPERFAMILY SSF46785 7 89 8.61E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 Gene3D G3DSA:3.40.190.10 94 180 7.3E-23 T 22-04-2016 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 PANTHER PTHR30537:SF5 1 295 5.1E-98 T 22-04-2016 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 Gene3D G3DSA:3.40.190.10 181 263 2.0E-22 T 22-04-2016 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 PANTHER PTHR30537 1 295 5.1E-98 T 22-04-2016 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 Gene3D G3DSA:1.10.10.10 6 86 5.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18445 95f115aab05fde58238a34db5cf0be02 299 Pfam PF03466 LysR substrate binding domain 90 295 1.6E-46 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Gene3D G3DSA:3.90.600.10 334 426 5.5E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 SMART SM01210 334 426 6.0E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 SUPERFAMILY SSF51246 333 427 6.8E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 SUPERFAMILY SSF56059 104 327 8.84E-63 T 22-04-2016 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Gene3D G3DSA:3.40.50.20 2 95 1.8E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 335 424 5.6E-31 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 SMART SM01209 103 300 7.2E-125 T 22-04-2016 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 SUPERFAMILY SSF52440 1 103 1.37E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 426 41.809 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.3E-33 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Gene3D G3DSA:3.30.1490.20 121 194 5.8E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Gene3D G3DSA:3.30.470.20 195 331 7.4E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 300 4.0E-76 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 426 3.1E-172 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 294 301 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS02140 671cd6f6afdc66f4855e4fa447867e79 431 PANTHER PTHR10520 1 429 1.9E-272 T 22-04-2016 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 SUPERFAMILY SSF55347 288 451 7.44E-53 T 22-04-2016 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 Gene3D G3DSA:3.40.50.720 128 296 2.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 Gene3D G3DSA:3.30.360.10 297 452 4.0E-54 T 22-04-2016 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.3E-46 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PANTHER PTHR10836:SF35 115 475 2.4E-230 T 22-04-2016 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 288 2.4E-38 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 SMART SM00846 127 288 2.9E-52 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PANTHER PTHR10836 115 475 2.4E-230 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 SUPERFAMILY SSF51735 128 304 1.75E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.6E-18 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.6E-18 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.6E-18 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.6E-18 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS09425 4b2d5ea6df7787a456fab3e46c9c6f21 479 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 461 1.8E-111 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 SUPERFAMILY SSF51735 53 212 1.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 24 7.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 4 27 4.5E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 PANTHER PTHR22604:SF2 13 271 8.7E-144 T 22-04-2016 SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 PANTHER PTHR22604:SF2 288 447 8.7E-144 T 22-04-2016 SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 Gene3D G3DSA:3.40.50.720 390 416 3.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 Gene3D G3DSA:3.40.50.720 52 218 3.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 PANTHER PTHR22604 13 271 8.7E-144 T 22-04-2016 SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 PANTHER PTHR22604 288 447 8.7E-144 T 22-04-2016 SAMA_RS06255 25326b565b6290d3c632ec4d8dea82c1 455 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 53 179 3.0E-15 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 SUPERFAMILY SSF51556 617 914 1.67E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 SUPERFAMILY SSF51338 913 950 1.83E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 SUPERFAMILY SSF51338 528 617 1.83E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 SUPERFAMILY SSF51338 356 417 7.05E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 SUPERFAMILY SSF51338 34 102 1.87E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 PANTHER PTHR11271 530 974 8.4E-26 T 22-04-2016 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 Pfam PF01979 Amidohydrolase family 856 945 4.5E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 Gene3D G3DSA:2.30.40.10 338 420 1.3E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 Gene3D G3DSA:2.30.40.10 852 950 5.6E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 Gene3D G3DSA:2.30.40.10 33 155 2.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 Gene3D G3DSA:2.30.40.10 557 668 2.3E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06110 58606e3c4bfeba473b302fdbda3972b6 1018 PANTHER PTHR11271:SF39 530 974 8.4E-26 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 Gene3D G3DSA:1.10.101.10 528 597 1.2E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 Pfam PF01471 Putative peptidoglycan binding domain 541 596 5.4E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 SUPERFAMILY SSF52540 5 261 3.02E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 SUPERFAMILY SSF47090 527 601 8.89E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 Gene3D G3DSA:3.40.50.300 27 183 1.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894 2 297 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894 331 341 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894 377 613 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 SMART SM00382 42 195 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894:SF2 2 297 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894:SF2 331 341 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 PANTHER PTHR35894:SF2 377 613 5.4E-216 T 22-04-2016 SAMA_RS04375 ebf488305b716375342ab6b086a21589 613 Pfam PF13401 AAA domain 42 171 3.6E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 Gene3D G3DSA:1.20.1260.10 3 55 4.2E-86 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 Gene3D G3DSA:1.20.1260.10 107 253 4.2E-86 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 SUPERFAMILY SSF47240 5 55 2.65E-71 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 SUPERFAMILY SSF47240 107 253 2.65E-71 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 PIRSF PIRSF020736 1 255 1.7E-90 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 PANTHER PTHR42637 1 253 1.4E-92 T 22-04-2016 SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 3 250 1.7E-109 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 SAMA_RS06375 b0e8736708677efc2a69388b11443b45 255 PANTHER PTHR42637:SF1 1 253 1.4E-92 T 22-04-2016 SAMA_RS07220 4f6afbfa9c6ba92797345fe757dc48fa 170 SUPERFAMILY SSF55729 64 148 1.17E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07220 4f6afbfa9c6ba92797345fe757dc48fa 170 Gene3D G3DSA:3.40.630.30 52 149 1.8E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07220 4f6afbfa9c6ba92797345fe757dc48fa 170 Pfam PF00583 Acetyltransferase (GNAT) family 64 147 8.2E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS03325 d0b32fd047f49d9b8d014d21ba5828f6 461 SUPERFAMILY SSF52833 8 118 3.28E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03325 d0b32fd047f49d9b8d014d21ba5828f6 461 Gene3D G3DSA:3.40.30.10 40 109 1.5E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 PANTHER PTHR24960:SF38 1 76 1.1E-27 T 22-04-2016 SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 Pfam PF00037 4Fe-4S binding domain 4 24 2.7E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 PANTHER PTHR24960 1 76 1.1E-27 T 22-04-2016 SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 SUPERFAMILY SSF54862 4 75 5.5E-19 T 22-04-2016 SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 Gene3D G3DSA:3.30.70.20 3 71 1.1E-18 T 22-04-2016 SAMA_RS05230 cb9ca32e91186e9bec0df782018b0176 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS16265 1bb0d9b1436beab6f109e7a296c89c40 295 Pfam PF04280 Tim44-like domain 173 295 4.1E-17 T 22-04-2016 IPR007379 Tim44-like domain SAMA_RS16265 1bb0d9b1436beab6f109e7a296c89c40 295 SMART SM00978 164 295 1.0E-40 T 22-04-2016 IPR007379 Tim44-like domain SAMA_RS16265 1bb0d9b1436beab6f109e7a296c89c40 295 SUPERFAMILY SSF54427 173 295 2.85E-18 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS16265 1bb0d9b1436beab6f109e7a296c89c40 295 PANTHER PTHR41542:SF1 1 295 2.2E-87 T 22-04-2016 SAMA_RS16265 1bb0d9b1436beab6f109e7a296c89c40 295 PANTHER PTHR41542 1 295 2.2E-87 T 22-04-2016 SAMA_RS08365 12aec0a1b4c4b25f297c9e305f0c6dd2 171 SUPERFAMILY SSF54637 2 168 8.2E-56 T 22-04-2016 IPR029069 HotDog domain SAMA_RS08365 12aec0a1b4c4b25f297c9e305f0c6dd2 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.98 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS08365 12aec0a1b4c4b25f297c9e305f0c6dd2 171 Pfam PF07977 FabA-like domain 28 157 1.6E-51 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS08365 12aec0a1b4c4b25f297c9e305f0c6dd2 171 Gene3D G3DSA:3.10.129.10 3 167 3.5E-58 T 22-04-2016 IPR029069 HotDog domain SAMA_RS08365 12aec0a1b4c4b25f297c9e305f0c6dd2 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 170 3.9E-89 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS14715 f0d4e58f4e83a52ec3b953b15673e3d7 764 Pfam PF04453 Organic solvent tolerance protein 293 665 3.7E-109 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SAMA_RS14715 f0d4e58f4e83a52ec3b953b15673e3d7 764 Gene3D G3DSA:2.60.450.10 45 200 4.2E-17 T 22-04-2016 SAMA_RS14715 f0d4e58f4e83a52ec3b953b15673e3d7 764 Pfam PF03968 OstA-like protein 53 184 5.0E-12 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SAMA_RS14715 f0d4e58f4e83a52ec3b953b15673e3d7 764 PANTHER PTHR30189 28 757 1.3E-95 T 22-04-2016 SAMA_RS14715 f0d4e58f4e83a52ec3b953b15673e3d7 764 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 739 21.748 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 PANTHER PTHR31273 3 788 0.0 T 22-04-2016 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 PANTHER PTHR31273:SF0 3 788 0.0 T 22-04-2016 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 ProSitePatterns PS60003 Phosphoketolase signature 2. 152 170 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 Pfam PF09364 XFP N-terminal domain 3 381 1.4E-126 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 SUPERFAMILY SSF52518 376 591 5.3E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 ProSitePatterns PS60002 Phosphoketolase signature 1. 139 145 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 PIRSF PIRSF017245 1 788 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 Gene3D G3DSA:3.40.50.970 3 253 9.2E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 398 571 7.9E-66 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 Pfam PF09363 XFP C-terminal domain 585 786 1.0E-58 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 SAMA_RS04780 75e198667bd2bbbdd74ff5b75521079e 788 SUPERFAMILY SSF52518 6 324 9.54E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 147 162 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 SUPERFAMILY SSF53623 14 289 2.56E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 55 78 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 SUPERFAMILY SSF53244 292 418 6.54E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 PANTHER PTHR11136 17 415 3.7E-115 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 Pfam PF08245 Mur ligase middle domain 57 199 5.7E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 369 2.2E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 Gene3D G3DSA:3.40.1190.10 14 290 5.9E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 Gene3D G3DSA:3.90.190.20 293 419 7.0E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 PANTHER PTHR11136:SF0 17 415 3.7E-115 T 22-04-2016 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 PIRSF PIRSF001563 12 421 6.5E-105 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SAMA_RS11230 e2cd277c622cfb2a3baee7d7f2cd7a3f 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 34 420 1.1E-101 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SAMA_RS11240 971b3cce8afb98f0054c982d4755a06a 937 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 57 130 1.3E-28 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal SAMA_RS11240 971b3cce8afb98f0054c982d4755a06a 937 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 893 935 1.1E-15 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Gene3D G3DSA:3.40.50.970 34 415 2.8E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 SUPERFAMILY SSF52518 31 361 2.14E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Pfam PF00676 Dehydrogenase E1 component 68 358 8.1E-29 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Gene3D G3DSA:3.40.50.970 416 586 1.6E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624 371 376 3.9E-70 T 22-04-2016 IPR033247 Transketolase family SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624 218 335 3.9E-70 T 22-04-2016 IPR033247 Transketolase family SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624 395 696 3.9E-70 T 22-04-2016 IPR033247 Transketolase family SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 SMART SM00861 402 583 1.7E-42 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 SUPERFAMILY SSF52922 606 738 4.43E-25 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Gene3D G3DSA:3.40.50.920 617 735 1.3E-23 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624:SF21 371 376 3.9E-70 T 22-04-2016 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624:SF21 218 335 3.9E-70 T 22-04-2016 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 PANTHER PTHR11624:SF21 395 696 3.9E-70 T 22-04-2016 SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Pfam PF02779 Transketolase, pyrimidine binding domain 402 579 2.1E-25 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 Pfam PF02780 Transketolase, C-terminal domain 617 712 2.5E-17 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SAMA_RS14610 d3bfa53a961661e0e914a35d42a1f35c 761 SUPERFAMILY SSF52518 401 593 7.5E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS04200 e83adbe2175a3676f9748a61ce61c4c3 159 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 1.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS04200 e83adbe2175a3676f9748a61ce61c4c3 159 Gene3D G3DSA:3.40.630.30 1 143 9.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS04200 e83adbe2175a3676f9748a61ce61c4c3 159 SUPERFAMILY SSF55729 1 157 1.03E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS00875 e6ebafdb49a8fb13c08e2dc2661111b1 172 Gene3D G3DSA:3.55.40.10 21 170 7.7E-42 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SAMA_RS00875 e6ebafdb49a8fb13c08e2dc2661111b1 172 Pfam PF12019 Type II transport protein GspH 24 156 2.9E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 22 471 7.5E-182 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Pfam PF01225 Mur ligase family, catalytic domain 22 120 9.7E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 SUPERFAMILY SSF53244 324 471 2.98E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 SUPERFAMILY SSF53623 106 323 5.76E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 PANTHER PTHR23135:SF5 15 466 4.6E-227 T 22-04-2016 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Gene3D G3DSA:3.40.1190.10 109 326 2.0E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Pfam PF08245 Mur ligase middle domain 125 305 1.6E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 20 477 44.153 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 SUPERFAMILY SSF51984 21 107 9.55E-30 T 22-04-2016 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 414 1.8E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Gene3D G3DSA:3.90.190.20 327 473 4.0E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 Gene3D G3DSA:3.40.50.720 21 108 1.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS01895 0c63c202b5ed3aa1233305ebabacbab3 484 PANTHER PTHR23135 15 466 4.6E-227 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Pfam PF03476 MOSC N-terminal beta barrel domain 1 122 6.2E-26 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 562 570 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 PANTHER PTHR14237 5 270 2.5E-75 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Pfam PF00175 Oxidoreductase NAD-binding domain 390 498 3.8E-10 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF52343 559 572 1.31E-27 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF52343 380 517 1.31E-27 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Pfam PF03473 MOSC domain 140 264 6.5E-26 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 541 604 1.1E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Gene3D G3DSA:2.40.30.10 282 381 5.7E-26 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Pfam PF00970 Oxidoreductase FAD-binding domain 285 380 1.9E-12 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Gene3D G3DSA:3.10.20.30 514 612 1.0E-26 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 Gene3D G3DSA:3.40.50.80 384 513 3.0E-28 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF63380 281 380 1.95E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF50800 151 267 3.03E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF50800 2 50 3.03E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF54292 509 611 3.67E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 PANTHER PTHR14237:SF30 5 270 2.5E-75 T 22-04-2016 SAMA_RS13800 6ace591280503f0e2e8ce67130c4536d 616 SUPERFAMILY SSF141673 4 136 3.01E-31 T 22-04-2016 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 SUPERFAMILY SSF53383 109 567 1.31E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 PANTHER PTHR11751 110 580 6.3E-228 T 22-04-2016 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 SUPERFAMILY SSF52172 1 108 5.47E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 PANTHER PTHR11751:SF425 110 580 6.3E-228 T 22-04-2016 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 1.3E-191 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 PIRSF PIRSF009393 1 720 2.1E-294 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Gene3D G3DSA:3.40.50.220 1 108 4.7E-35 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Gene3D G3DSA:3.90.100.10 594 719 1.1E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 SUPERFAMILY SSF55904 571 719 4.05E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 6.4E-22 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Gene3D G3DSA:3.90.1150.10 421 593 9.0E-71 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Gene3D G3DSA:3.40.640.10 109 418 5.2E-116 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 3.1E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SAMA_RS17360 1309353b37f9a560aefb23c787f18a59 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 SMART SM00900 142 240 9.5E-28 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 246 6.6E-63 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 PANTHER PTHR37838 1 253 8.2E-80 T 22-04-2016 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 PANTHER PTHR37838:SF1 1 253 8.2E-80 T 22-04-2016 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 28.6 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 Pfam PF04205 FMN-binding domain 142 236 1.2E-13 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS15545 e3dfa7bd358ac10ddda934535a1a3acc 254 PIRSF PIRSF009437 1 254 2.7E-81 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 Gene3D G3DSA:2.120.10.30 42 150 2.7E-46 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 Gene3D G3DSA:2.120.10.30 191 375 2.7E-46 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 Pfam PF00326 Prolyl oligopeptidase family 474 682 1.8E-59 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 SUPERFAMILY SSF82171 40 417 4.84E-37 T 22-04-2016 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 Pfam PF07676 WD40-like Beta Propeller Repeat 82 116 2.1E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 SUPERFAMILY SSF53474 427 681 4.71E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 PANTHER PTHR11731:SF129 142 681 0.0 T 22-04-2016 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 PANTHER PTHR11731:SF129 37 97 0.0 T 22-04-2016 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 Gene3D G3DSA:3.40.50.1820 428 681 1.6E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 PANTHER PTHR11731 142 681 0.0 T 22-04-2016 SAMA_RS08815 28505ff6deedce27964b3ad7c415dd73 684 PANTHER PTHR11731 37 97 0.0 T 22-04-2016 SAMA_RS06225 caa420788025a64ecd8a6b193a9e6523 1186 Pfam PF12730 ABC-2 family transporter protein 348 466 5.0E-8 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SAMA_RS06225 caa420788025a64ecd8a6b193a9e6523 1186 Pfam PF01433 Peptidase family M1 783 972 6.9E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS06225 caa420788025a64ecd8a6b193a9e6523 1186 Gene3D G3DSA:1.10.390.10 999 1063 3.5E-6 T 22-04-2016 SAMA_RS06225 caa420788025a64ecd8a6b193a9e6523 1186 SUPERFAMILY SSF55486 839 1067 5.42E-22 T 22-04-2016 SAMA_RS10440 f999ad501bf01d9d81cd5dd851d19780 286 SUPERFAMILY SSF56925 220 286 3.06E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS10440 f999ad501bf01d9d81cd5dd851d19780 286 SUPERFAMILY SSF56925 69 162 3.06E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS10440 f999ad501bf01d9d81cd5dd851d19780 286 Gene3D G3DSA:2.40.160.20 231 286 1.6E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS10440 f999ad501bf01d9d81cd5dd851d19780 286 Pfam PF13505 Outer membrane protein beta-barrel domain 8 286 3.8E-7 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Gene3D G3DSA:2.60.40.10 377 497 6.2E-30 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 PANTHER PTHR24960 53 414 4.2E-149 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 PANTHER PTHR24960:SF45 53 414 4.2E-149 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 375 497 2.8E-31 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 SUPERFAMILY SSF54862 128 150 1.31E-29 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 SUPERFAMILY SSF54862 196 366 1.31E-29 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Gene3D G3DSA:3.30.70.20 246 292 6.0E-6 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 292 303 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Pfam PF13746 4Fe-4S dicluster domain 242 345 4.2E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 64 478 9.1E-152 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Gene3D G3DSA:3.30.70.20 293 336 2.2E-6 T 22-04-2016 SAMA_RS14810 4631fc4484c76cab6acf316dfc80555f 497 Pfam PF12801 4Fe-4S binding domain 118 157 5.4E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Gene3D G3DSA:3.50.50.60 144 381 4.9E-99 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Gene3D G3DSA:3.50.50.60 528 591 4.9E-99 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Gene3D G3DSA:1.10.1130.10 36 112 4.5E-13 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 PANTHER PTHR11632 147 593 7.9E-156 T 22-04-2016 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 150 583 3.5E-164 T 22-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 SUPERFAMILY SSF48695 34 115 1.2E-15 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 SUPERFAMILY SSF56425 382 527 8.37E-44 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Pfam PF14537 Cytochrome c3 34 112 7.3E-17 T 22-04-2016 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Pfam PF00890 FAD binding domain 150 571 2.4E-89 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 SUPERFAMILY SSF51905 146 404 1.73E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 SUPERFAMILY SSF51905 531 592 1.73E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03250 da5edf7046e0641c9ddd85717d4ea6a9 593 Gene3D G3DSA:3.90.700.10 387 523 6.4E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 SMART SM00994 12 51 1.6E-23 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.507 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 412 2.3E-212 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 SMART SM00382 111 333 8.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Pfam PF06689 ClpX C4-type zinc finger 13 50 2.0E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 SUPERFAMILY SSF52540 62 401 7.22E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 SMART SM01086 317 412 8.4E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 2.5E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 3.0E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Gene3D G3DSA:3.40.50.300 294 311 2.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Gene3D G3DSA:3.40.50.300 66 253 2.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 Gene3D G3DSA:1.10.8.60 316 416 1.1E-37 T 22-04-2016 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 PANTHER PTHR11262 2 421 3.4E-257 T 22-04-2016 SAMA_RS06425 f38af2ac088123140df603d4ac39e376 425 SUPERFAMILY SSF57716 13 48 1.08E-11 T 22-04-2016 SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 PANTHER PTHR33121:SF16 251 632 6.7E-91 T 22-04-2016 SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 Pfam PF00563 EAL domain 402 632 6.3E-51 T 22-04-2016 IPR001633 EAL domain SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 376 2.4E-11 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 SMART SM00052 394 635 1.6E-32 T 22-04-2016 IPR001633 EAL domain SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 SUPERFAMILY SSF141868 401 633 1.44E-53 T 22-04-2016 IPR001633 EAL domain SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 Gene3D G3DSA:3.30.70.270 224 384 7.7E-10 T 22-04-2016 SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 PANTHER PTHR33121 251 632 6.7E-91 T 22-04-2016 SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 Gene3D G3DSA:3.20.20.450 397 634 9.9E-52 T 22-04-2016 IPR001633 EAL domain SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 SUPERFAMILY SSF55073 228 384 1.1E-9 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02415 6d96d8fbd8f68bece62e8dabe95ab7e5 635 SMART SM00267 211 382 1.0E-6 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 3 323 53.401 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 Gene3D G3DSA:3.20.20.70 6 248 7.0E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 8 322 5.6E-155 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 Pfam PF01207 Dihydrouridine synthase (Dus) 11 319 1.1E-89 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 PANTHER PTHR11082:SF29 5 321 2.9E-161 T 22-04-2016 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 PANTHER PTHR11082 5 321 2.9E-161 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 PIRSF PIRSF006621 2 326 7.2E-75 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS15950 2f8f7ea2d1f7f69fda93d8fef3c72093 326 SUPERFAMILY SSF51395 9 319 1.34E-75 T 22-04-2016 SAMA_RS10090 a162c0b8840e29a130973a6405947d25 92 SUPERFAMILY SSF160191 1 89 5.1E-38 T 22-04-2016 SAMA_RS10090 a162c0b8840e29a130973a6405947d25 92 Pfam PF05166 YcgL domain 3 75 9.1E-32 T 22-04-2016 IPR027354 YcgL domain SAMA_RS10090 a162c0b8840e29a130973a6405947d25 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 78 7.0E-39 T 22-04-2016 IPR027354 YcgL domain SAMA_RS10090 a162c0b8840e29a130973a6405947d25 92 PANTHER PTHR38109 2 92 1.1E-34 T 22-04-2016 SAMA_RS10090 a162c0b8840e29a130973a6405947d25 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.74 T 22-04-2016 IPR027354 YcgL domain SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 SUPERFAMILY SSF46785 4 89 1.14E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 Gene3D G3DSA:3.40.190.10 166 255 3.2E-7 T 22-04-2016 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 SUPERFAMILY SSF53850 91 296 6.7E-20 T 22-04-2016 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 Gene3D G3DSA:1.10.10.10 3 88 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 Pfam PF03466 LysR substrate binding domain 93 292 2.1E-15 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 PANTHER PTHR30126 2 303 2.5E-159 T 22-04-2016 SAMA_RS08185 75e7c75d0cb2753fa6db0dae6c5d239b 304 PANTHER PTHR30126:SF19 2 303 2.5E-159 T 22-04-2016 SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 PANTHER PTHR24031:SF334 3 382 6.3E-190 T 22-04-2016 SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 390 47.54 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 SMART SM00490 259 340 9.3E-32 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 Pfam PF00270 DEAD/DEAH box helicase 25 189 5.6E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 SMART SM00487 20 222 1.0E-51 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 Gene3D G3DSA:3.40.50.300 212 374 2.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 PANTHER PTHR24031 3 382 6.3E-190 T 22-04-2016 SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 Gene3D G3DSA:3.40.50.300 3 211 8.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14345 35e435b37da23edb76fa7ebfea03433c 391 SUPERFAMILY SSF52540 73 357 2.53E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10130 4d0f905cc8b3885be2eb1e0152cf4f74 236 Pfam PF13398 Peptidase M50B-like 27 223 3.2E-44 T 22-04-2016 SAMA_RS10130 4d0f905cc8b3885be2eb1e0152cf4f74 236 PANTHER PTHR33979:SF1 20 227 9.9E-58 T 22-04-2016 SAMA_RS10130 4d0f905cc8b3885be2eb1e0152cf4f74 236 PANTHER PTHR33979 20 227 9.9E-58 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 2.6E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 Gene3D G3DSA:3.30.590.10 106 457 3.1E-138 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 SUPERFAMILY SSF55931 102 468 2.16E-137 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 PANTHER PTHR20852:SF15 1 138 5.7E-266 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 PANTHER PTHR20852:SF15 160 469 5.7E-266 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 SMART SM01230 102 379 5.7E-149 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 Gene3D G3DSA:3.10.20.70 3 105 9.8E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 7.6E-138 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 PANTHER PTHR20852 1 138 5.7E-266 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 PANTHER PTHR20852 160 469 5.7E-266 T 22-04-2016 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.7E-205 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS17775 8bc524a69e5efa0613ec487ebf913397 469 SUPERFAMILY SSF54368 3 99 8.89E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 PANTHER PTHR13696:SF54 1 222 2.8E-89 T 22-04-2016 SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 157 9.8E-16 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 SUPERFAMILY SSF52540 1 223 6.13E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 PANTHER PTHR13696 1 222 2.8E-89 T 22-04-2016 SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 Gene3D G3DSA:3.40.50.300 1 215 1.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12410 17883e8b0ac02496e99d1dbebcbcf6db 247 PIRSF PIRSF009320 1 223 2.8E-35 T 22-04-2016 SAMA_RS02710 cc097ecd9bd6d865865aee90777a63d3 309 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS02710 cc097ecd9bd6d865865aee90777a63d3 309 PANTHER PTHR11079 16 299 6.1E-80 T 22-04-2016 SAMA_RS02710 cc097ecd9bd6d865865aee90777a63d3 309 Pfam PF00849 RNA pseudouridylate synthase 97 252 1.7E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS02710 cc097ecd9bd6d865865aee90777a63d3 309 SUPERFAMILY SSF55120 84 301 8.96E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS02710 cc097ecd9bd6d865865aee90777a63d3 309 PANTHER PTHR11079:SF61 16 299 6.1E-80 T 22-04-2016 SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 PANTHER PTHR30217 242 332 3.8E-191 T 22-04-2016 SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 PANTHER PTHR30217 1 218 3.8E-191 T 22-04-2016 SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 Pfam PF01136 Peptidase family U32 76 332 8.9E-68 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 PANTHER PTHR30217:SF3 242 332 3.8E-191 T 22-04-2016 SAMA_RS05210 f77a544f52d5987a0d56f6a2630e37b2 333 PANTHER PTHR30217:SF3 1 218 3.8E-191 T 22-04-2016 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 386 4.0E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 391 45.866 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 SUPERFAMILY SSF69055 300 394 7.85E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 131 4.8E-42 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 PANTHER PTHR30525 1 395 3.5E-221 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 SUPERFAMILY SSF55347 125 273 1.24E-62 T 22-04-2016 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Gene3D G3DSA:1.10.1740.10 312 394 8.0E-31 T 22-04-2016 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 3.9E-160 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 PIRSF PIRSF006205 1 395 2.7E-148 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 SUPERFAMILY SSF51735 2 149 8.47E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Gene3D G3DSA:3.40.50.720 1 149 1.8E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06000 e34cb6098690ecf691c9bcd2dabda863 395 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 238 2.1E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SMART SM01086 655 744 1.8E-30 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SUPERFAMILY SSF52540 439 739 3.39E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PANTHER PTHR11638 1 748 0.0 T 22-04-2016 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SMART SM00382 489 656 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SMART SM00382 208 353 8.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PANTHER PTHR11638:SF111 1 748 0.0 T 22-04-2016 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Gene3D G3DSA:1.10.8.60 354 437 5.3E-29 T 22-04-2016 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 2.685173E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 2.685173E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 2.685173E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 2.685173E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Gene3D G3DSA:1.10.8.60 668 747 4.1E-28 T 22-04-2016 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Gene3D G3DSA:1.10.1780.10 1 141 8.2E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 734 2.4E-20 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 3.8E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SUPERFAMILY SSF52540 170 423 3.37E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 315 3.0E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 SUPERFAMILY SSF81923 1 141 3.01E-60 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Gene3D G3DSA:3.40.50.300 173 352 1.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Gene3D G3DSA:3.40.50.300 445 667 2.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10720 7ae5243d9bf611b8b1b4d1cf4504330d 753 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 2.1E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 237 1.4E-66 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 SUPERFAMILY SSF53335 15 236 2.37E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 Gene3D G3DSA:3.40.50.150 57 192 1.1E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 PANTHER PTHR23417:SF14 16 238 7.5E-86 T 22-04-2016 SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 237 30.803 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 Pfam PF02390 Putative methyltransferase 64 232 2.1E-61 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SAMA_RS12990 752352a66ec4a362a4ae7ff4318117db 238 PANTHER PTHR23417 16 238 7.5E-86 T 22-04-2016 SAMA_RS17575 eee6cd52ba72a8c2aa20fcabfaed00d6 234 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 201 9.8E-67 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS12830 c12fd13a2d05b4c76cba80604ca22041 494 Pfam PF03553 Na+/H+ antiporter family 164 470 9.1E-52 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS12830 c12fd13a2d05b4c76cba80604ca22041 494 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 471 5.5E-135 T 22-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 SAMA_RS12830 c12fd13a2d05b4c76cba80604ca22041 494 PANTHER PTHR33451:SF3 1 490 1.6E-153 T 22-04-2016 SAMA_RS12830 c12fd13a2d05b4c76cba80604ca22041 494 PANTHER PTHR33451 1 490 1.6E-153 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 Gene3D G3DSA:3.30.565.10 546 716 4.9E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 SUPERFAMILY SSF49344 80 257 1.88E-9 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 Gene3D G3DSA:1.10.287.130 485 545 8.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423:SF374 26 161 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423:SF374 268 332 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423:SF374 433 715 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 8 714 4.5E-303 T 22-04-2016 IPR022510 Sortase system, histidine kinase SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423 26 161 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423 268 332 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 PANTHER PTHR24423 433 715 6.8E-71 T 22-04-2016 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 Gene3D G3DSA:2.60.40.1190 84 243 4.1E-5 T 22-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 SMART SM00387 604 717 1.0E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 559 4.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 606 716 2.0E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 SUPERFAMILY SSF47384 479 558 1.82E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 SMART SM00388 495 560 5.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10470 d9ec67df97adfcfd3b1d9549c331893c 719 SUPERFAMILY SSF55874 551 715 7.33E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 PANTHER PTHR24095 16 632 0.0 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Gene3D G3DSA:3.40.50.980 253 412 1.3E-24 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Pfam PF00501 AMP-binding enzyme 77 512 7.6E-81 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Pfam PF13193 AMP-binding enzyme C-terminal domain 522 600 2.5E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Gene3D G3DSA:2.30.38.10 428 505 6.6E-11 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 SUPERFAMILY SSF56801 5 626 2.49E-153 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 248 259 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 PANTHER PTHR24095:SF167 16 632 0.0 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Gene3D G3DSA:3.40.50.980 65 252 2.4E-36 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Gene3D G3DSA:3.30.300.30 508 635 3.8E-23 T 22-04-2016 SAMA_RS07115 504d11799180b4f8cd6993efff45d33c 644 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 16 69 1.2E-16 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SAMA_RS08995 8c995d35937e01bd0c165f60a5010434 144 Pfam PF03795 YCII-related domain 39 123 1.4E-10 T 22-04-2016 IPR005545 YCII-related SAMA_RS08995 8c995d35937e01bd0c165f60a5010434 144 SUPERFAMILY SSF54909 30 124 1.23E-15 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS08995 8c995d35937e01bd0c165f60a5010434 144 Gene3D G3DSA:3.30.70.1060 39 123 2.4E-13 T 22-04-2016 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 PRINTS PR01021 OMPA domain signature 302 318 4.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 PRINTS PR01021 OMPA domain signature 257 279 4.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 PRINTS PR01021 OMPA domain signature 287 302 4.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 SUPERFAMILY SSF103647 210 243 2.35E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 Gene3D G3DSA:4.10.1080.10 212 239 1.5E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 Pfam PF00691 OmpA family 257 352 3.4E-21 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 SUPERFAMILY SSF103088 243 358 6.28E-33 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 Gene3D G3DSA:3.30.1330.60 246 359 2.1E-35 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 PANTHER PTHR30128 193 367 1.1E-43 T 22-04-2016 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 Gene3D G3DSA:2.40.160.20 13 211 1.0E-42 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 SUPERFAMILY SSF56925 26 200 2.62E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS04775 cd18bad71926b93595887369f7a2debe 368 Pfam PF01389 OmpA-like transmembrane domain 29 198 2.3E-21 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 Pfam PF13508 Acetyltransferase (GNAT) domain 332 411 6.6E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 PANTHER PTHR30602:SF3 1 439 4.1E-292 T 22-04-2016 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 Gene3D G3DSA:3.40.630.30 292 435 2.0E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 SUPERFAMILY SSF55729 248 415 1.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 Gene3D G3DSA:3.40.1160.10 21 288 4.4E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 Pfam PF00696 Amino acid kinase family 23 265 1.6E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 439 229.433 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 SUPERFAMILY SSF53633 3 290 6.28E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 PANTHER PTHR30602 1 439 4.1E-292 T 22-04-2016 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 PIRSF PIRSF000423 1 439 5.0E-200 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SAMA_RS01770 3591ded43873e15c7bd55152f8cfc126 440 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 438 4.0E-190 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SAMA_RS08325 4b3d88a72cd2242cad64b416519b5284 190 Gene3D G3DSA:3.40.1260.10 62 186 1.7E-12 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS08325 4b3d88a72cd2242cad64b416519b5284 190 Pfam PF02635 DsrE/DsrF-like family 64 186 8.1E-17 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SAMA_RS08325 4b3d88a72cd2242cad64b416519b5284 190 SUPERFAMILY SSF75169 63 189 2.69E-22 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.8E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 PANTHER PTHR11260:SF285 1 202 2.1E-35 T 22-04-2016 SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 Gene3D G3DSA:3.40.30.10 2 85 1.2E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 PANTHER PTHR11260 1 202 2.1E-35 T 22-04-2016 SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 SUPERFAMILY SSF52833 1 75 2.91E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 SUPERFAMILY SSF47616 78 201 1.07E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS13095 4d19ea09613f4b3a625b7b0e2bfdede3 208 Gene3D G3DSA:1.20.1050.10 86 195 6.5E-14 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS08820 d7b907f47240d6f787aaaef615ae8e7b 217 SUPERFAMILY SSF54001 15 194 1.47E-16 T 22-04-2016 SAMA_RS08820 d7b907f47240d6f787aaaef615ae8e7b 217 Gene3D G3DSA:2.30.30.330 14 170 1.8E-18 T 22-04-2016 SAMA_RS13795 81e2e69fc25c7e3c7f67f33142dd4c7d 114 Pfam PF05656 Protein of unknown function (DUF805) 11 110 3.9E-33 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SAMA_RS13795 81e2e69fc25c7e3c7f67f33142dd4c7d 114 PANTHER PTHR34980:SF2 1 112 5.3E-31 T 22-04-2016 SAMA_RS13795 81e2e69fc25c7e3c7f67f33142dd4c7d 114 PANTHER PTHR34980 1 112 5.3E-31 T 22-04-2016 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 SMART SM00316 37 119 3.5E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 PANTHER PTHR30001 1 871 0.0 T 22-04-2016 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 Gene3D G3DSA:2.40.50.140 31 124 6.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 PANTHER PTHR30001:SF1 1 871 0.0 T 22-04-2016 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 Hamap MF_00970 Ribonuclease E [rne]. 1 1099 36.594 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 Pfam PF10150 Ribonuclease E/G family 121 390 1.6E-95 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 Pfam PF00575 S1 RNA binding domain 36 118 2.0E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 SUPERFAMILY SSF50249 40 124 7.89E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10385 6dc0e543dbb2a458c814aa3cab11a64c 1114 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 1.2E-169 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SAMA_RS04220 2f2c36f1d7a97be6adb787238fb97fca 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 242 9.7E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS04220 2f2c36f1d7a97be6adb787238fb97fca 249 PANTHER PTHR35936 1 241 5.2E-13 T 22-04-2016 SAMA_RS04220 2f2c36f1d7a97be6adb787238fb97fca 249 SUPERFAMILY SSF53850 25 242 2.53E-29 T 22-04-2016 SAMA_RS04220 2f2c36f1d7a97be6adb787238fb97fca 249 Gene3D G3DSA:3.40.190.10 204 242 2.3E-8 T 22-04-2016 SAMA_RS04220 2f2c36f1d7a97be6adb787238fb97fca 249 Gene3D G3DSA:3.40.190.10 35 116 2.3E-8 T 22-04-2016 SAMA_RS12890 4e98d5c40cbd64d4208270ca43f52724 186 Pfam PF13590 Domain of unknown function (DUF4136) 23 181 1.7E-34 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 72 96 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 7 494 1.1E-54 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 PANTHER PTHR11654 275 513 1.7E-160 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 PANTHER PTHR11654 7 218 1.7E-160 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 SUPERFAMILY SSF103473 10 311 2.75E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 Gene3D G3DSA:1.20.1250.20 14 198 1.3E-15 T 22-04-2016 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 PANTHER PTHR11654:SF96 275 513 1.7E-160 T 22-04-2016 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 PANTHER PTHR11654:SF96 7 218 1.7E-160 T 22-04-2016 SAMA_RS12600 6e7501d6e33075bd86dfea787aa6525c 517 Pfam PF00854 POT family 83 451 1.7E-73 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 Gene3D G3DSA:3.40.50.300 100 340 3.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 Pfam PF00437 Type II/IV secretion system protein 12 268 4.2E-46 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 PANTHER PTHR30486:SF6 1 342 4.5E-206 T 22-04-2016 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 PANTHER PTHR30486 1 342 4.5E-206 T 22-04-2016 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 SUPERFAMILY SSF52540 5 335 3.4E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 1.4E-156 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SAMA_RS12925 10be9abaede89bd085dfdf2699c42b9d 345 SMART SM00382 122 229 0.0063 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 PANTHER PTHR30055 1 204 1.3E-95 T 22-04-2016 SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 SUPERFAMILY SSF46689 2 75 3.19E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 PANTHER PTHR30055:SF39 1 204 1.3E-95 T 22-04-2016 SAMA_RS00970 10ce5ab2eef6c5d29f4e7403a0e148b9 204 Gene3D G3DSA:1.10.357.10 2 173 9.0E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 Pfam PF00696 Amino acid kinase family 6 237 1.6E-38 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 SUPERFAMILY SSF53633 4 261 8.51E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 PIRSF PIRSF000728 1 261 1.0E-68 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 Hamap MF_00082_B Acetylglutamate kinase [argB]. 4 260 25.309 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 PANTHER PTHR23342 1 260 8.7E-80 T 22-04-2016 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 Gene3D G3DSA:3.40.1160.10 5 259 5.6E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS01390 b1d58e7531f2ac834926ead51f2587b9 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 8 234 3.4E-57 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 7.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.9E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 Gene3D G3DSA:3.40.50.720 3 229 1.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 Pfam PF00106 short chain dehydrogenase 4 189 4.9E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PANTHER PTHR24322 151 183 2.9E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 PANTHER PTHR24322 6 132 2.9E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS08320 e88dee970a25d2bf9e01b2911a21823a 229 SUPERFAMILY SSF51735 1 229 8.55E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 135 251 5.2E-39 T 22-04-2016 IPR014162 Tol-Pal system, YbgF SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 PANTHER PTHR26312:SF74 13 23 1.3E-26 T 22-04-2016 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 PANTHER PTHR26312:SF74 145 251 1.3E-26 T 22-04-2016 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 SUPERFAMILY SSF48452 140 248 5.84E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 Pfam PF13174 Tetratricopeptide repeat 209 241 1.1E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 PANTHER PTHR26312 13 23 1.3E-26 T 22-04-2016 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 PANTHER PTHR26312 145 251 1.3E-26 T 22-04-2016 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 Pfam PF16331 TolA binding protein trimerisation 30 101 1.1E-22 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 Gene3D G3DSA:1.25.40.10 136 245 3.3E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS10900 4098b1747d242a7911aaa803bb124ed5 254 Pfam PF13432 Tetratricopeptide repeat 144 204 3.3E-9 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.8E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.6E-22 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.292 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 PANTHER PTHR24095:SF178 11 645 0.0 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Gene3D G3DSA:2.30.38.10 439 515 2.9E-8 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Gene3D G3DSA:3.40.50.980 80 266 7.4E-41 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 PANTHER PTHR24095 11 645 0.0 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Gene3D G3DSA:3.40.50.980 267 427 2.5E-28 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Gene3D G3DSA:3.30.300.30 518 641 1.1E-28 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 SUPERFAMILY SSF56801 13 642 4.19E-185 T 22-04-2016 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SAMA_RS10835 8675e10fbf545e9c565b979552856931 650 Pfam PF00501 AMP-binding enzyme 83 522 1.8E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Gene3D G3DSA:3.30.70.20 494 536 9.0E-4 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.6E-5 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 1.6E-5 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 SUPERFAMILY SSF54862 451 550 3.14E-28 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Gene3D G3DSA:3.50.50.60 117 222 1.4E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Gene3D G3DSA:3.50.50.60 8 50 1.4E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Gene3D G3DSA:3.50.50.60 309 447 1.4E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 2.0E-49 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 SUPERFAMILY SSF51905 308 449 1.46E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 SUPERFAMILY SSF51905 2 210 1.46E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 SUPERFAMILY SSF54373 211 307 1.45E-35 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 PANTHER PTHR10617 1 474 4.9E-240 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.0E-6 T 22-04-2016 SAMA_RS18315 84794fd036f95ecefee70131f720612a 550 PANTHER PTHR10617:SF107 1 474 4.9E-240 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 PANTHER PTHR11271:SF42 1 429 4.6E-126 T 22-04-2016 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 Gene3D G3DSA:3.20.20.140 90 376 1.3E-89 T 22-04-2016 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 Gene3D G3DSA:2.30.40.10 377 400 1.9E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 PANTHER PTHR11271 1 429 4.6E-126 T 22-04-2016 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 SUPERFAMILY SSF51556 88 391 1.25E-103 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 SUPERFAMILY SSF51338 391 429 6.14E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 SUPERFAMILY SSF51338 53 88 6.14E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 Gene3D G3DSA:2.30.40.10 32 89 4.4E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 Gene3D G3DSA:2.30.40.10 401 429 4.4E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS02340 edccf41972b8f3fc32fe00abf00abba4 430 Pfam PF01979 Amidohydrolase family 84 427 2.0E-49 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS11650 2438f914cde7129f7f165c742f44b736 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.173 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SAMA_RS11650 2438f914cde7129f7f165c742f44b736 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 110 5.0E-30 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SAMA_RS11650 2438f914cde7129f7f165c742f44b736 112 Gene3D G3DSA:3.30.1360.20 12 111 3.3E-33 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SAMA_RS11650 2438f914cde7129f7f165c742f44b736 112 PANTHER PTHR12599 8 111 2.4E-36 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SAMA_RS11650 2438f914cde7129f7f165c742f44b736 112 SUPERFAMILY SSF55248 16 111 2.49E-33 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 PANTHER PTHR35369:SF2 2 154 1.9E-20 T 22-04-2016 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 PANTHER PTHR35369:SF2 184 330 1.9E-20 T 22-04-2016 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 Pfam PF00817 impB/mucB/samB family 22 157 3.1E-12 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 PANTHER PTHR35369 2 154 1.9E-20 T 22-04-2016 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 PANTHER PTHR35369 184 330 1.9E-20 T 22-04-2016 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 SUPERFAMILY SSF56672 198 268 1.93E-23 T 22-04-2016 SAMA_RS09760 6c12f1ae39797f120786f58117b6ffc8 763 SUPERFAMILY SSF56672 1 162 1.93E-23 T 22-04-2016 SAMA_RS01450 75ff58869cafee12465bc08c43d3b662 354 SUPERFAMILY SSF56112 7 342 1.02E-35 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS01450 75ff58869cafee12465bc08c43d3b662 354 Pfam PF01636 Phosphotransferase enzyme family 22 280 1.2E-28 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS01450 75ff58869cafee12465bc08c43d3b662 354 Gene3D G3DSA:3.90.1200.10 121 337 1.8E-19 T 22-04-2016 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 Gene3D G3DSA:3.40.50.1820 4 254 2.2E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 Pfam PF00561 alpha/beta hydrolase fold 16 242 1.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PANTHER PTHR10992 3 255 2.1E-69 T 22-04-2016 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PANTHER PTHR10992:SF768 3 255 2.1E-69 T 22-04-2016 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00412 Epoxide hydrolase signature 230 252 4.8E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00412 Epoxide hydrolase signature 96 109 4.8E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 PRINTS PR00412 Epoxide hydrolase signature 39 54 4.8E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SAMA_RS08890 5b6f0c69f2b597d960abc208363f9173 262 SUPERFAMILY SSF53474 4 254 1.1E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 SUPERFAMILY SSF51905 2 313 4.36E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 Gene3D G3DSA:3.50.50.60 234 315 2.3E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PANTHER PTHR22912 1 316 3.0E-167 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PANTHER PTHR22912:SF48 1 316 3.0E-167 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.1E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.3E-40 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.3E-40 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.3E-40 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.3E-40 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.3E-40 T 22-04-2016 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 299 8.2E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 Gene3D G3DSA:3.50.50.60 120 233 1.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.8E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SAMA_RS09230 0f7f09b4f6c4d23ee437f01b509f80c2 317 Gene3D G3DSA:3.50.50.60 4 119 5.6E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 PANTHER PTHR26402:SF518 9 130 1.2E-17 T 22-04-2016 SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 SUPERFAMILY SSF52172 11 135 3.42E-22 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 SMART SM00448 9 127 2.4E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 Pfam PF00072 Response regulator receiver domain 12 124 6.4E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 Gene3D G3DSA:3.40.50.2300 11 130 3.8E-25 T 22-04-2016 SAMA_RS16480 387c4625ab84b07c5a70b636872dfb4e 142 PANTHER PTHR26402 9 130 1.2E-17 T 22-04-2016 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 SUPERFAMILY SSF49303 770 848 3.31E-10 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 SUPERFAMILY SSF49303 671 768 4.68E-22 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Gene3D G3DSA:2.60.40.320 192 319 5.1E-13 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 SUPERFAMILY SSF51445 317 665 1.06E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 PANTHER PTHR10066 18 147 2.7E-231 T 22-04-2016 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 PANTHER PTHR10066 170 829 2.7E-231 T 22-04-2016 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Pfam PF00703 Glycosyl hydrolases family 2 209 320 3.4E-10 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Gene3D G3DSA:3.20.20.80 320 565 1.6E-68 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Gene3D G3DSA:3.20.20.80 603 666 1.6E-68 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 SUPERFAMILY SSF49303 208 320 1.01E-15 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 76 140 3.5E-7 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 SUPERFAMILY SSF49785 19 202 1.33E-56 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 Gene3D G3DSA:2.60.120.260 17 191 2.4E-28 T 22-04-2016 IPR008979 Galactose-binding domain-like SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 PANTHER PTHR10066:SF12 18 147 2.7E-231 T 22-04-2016 SAMA_RS01625 f262acbb411d3651f2a21e627a32868f 863 PANTHER PTHR10066:SF12 170 829 2.7E-231 T 22-04-2016 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 Gene3D G3DSA:3.40.47.10 161 318 1.5E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 PANTHER PTHR18919 26 319 3.8E-130 T 22-04-2016 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 Gene3D G3DSA:3.40.47.10 1 160 1.0E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 318 7.7E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 3.4E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 SUPERFAMILY SSF53901 4 319 7.08E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 319 68.741 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 PANTHER PTHR18919:SF109 26 319 3.8E-130 T 22-04-2016 SAMA_RS10350 fce5a6b3e03f43693449dfa7cdd78940 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 319 1.8E-138 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS04100 95b597e21c49e608bb0b295af7ec7f8c 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 6 226 5.2E-78 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein SAMA_RS04100 95b597e21c49e608bb0b295af7ec7f8c 237 Pfam PF03749 Sugar fermentation stimulation protein 13 225 8.5E-83 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein SAMA_RS04100 95b597e21c49e608bb0b295af7ec7f8c 237 PANTHER PTHR30545:SF2 1 231 1.4E-92 T 22-04-2016 SAMA_RS04100 95b597e21c49e608bb0b295af7ec7f8c 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.487 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein SAMA_RS04100 95b597e21c49e608bb0b295af7ec7f8c 237 PANTHER PTHR30545 1 231 1.4E-92 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 SUPERFAMILY SSF50715 345 553 4.87E-73 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:2.40.240.10 468 553 7.9E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:1.10.1160.10 267 343 1.5E-37 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 345 534 8.6E-59 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 62 75 9.9E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 45 9.9E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 9.9E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:2.40.240.10 353 467 5.4E-47 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 555 51.799 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PANTHER PTHR11451:SF29 9 249 5.9E-229 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PANTHER PTHR11451:SF29 272 555 5.9E-229 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PANTHER PTHR11451 9 249 5.9E-229 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 PANTHER PTHR11451 272 555 5.9E-229 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:3.90.800.10 103 211 1.5E-47 T 22-04-2016 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 30 342 1.2E-120 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 555 6.6E-273 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:3.40.50.620 214 266 1.6E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 Gene3D G3DSA:3.40.50.620 30 98 1.6E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06365 7478f04c90261215cb47c10045f13800 555 SUPERFAMILY SSF52374 12 342 4.5E-103 T 22-04-2016 SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 Pfam PF02976 DNA mismatch repair enzyme MutH 55 153 3.4E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 6 221 4.3E-101 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 SUPERFAMILY SSF52980 2 222 1.39E-74 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 Gene3D G3DSA:3.40.600.10 3 222 6.4E-73 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 224 140.47 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 SAMA_RS04510 a4866fe323736fb698fc6141de195f21 224 SMART SM00927 55 153 1.9E-64 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 Gene3D G3DSA:1.10.10.410 91 147 1.9E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 Gene3D G3DSA:1.10.1510.10 1 90 1.1E-32 T 22-04-2016 SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 Pfam PF09424 Yqey-like protein 5 146 8.6E-55 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 SUPERFAMILY SSF89095 1 147 2.62E-43 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 PANTHER PTHR28055 1 146 2.1E-49 T 22-04-2016 SAMA_RS04325 d847fc23107f723083d07b4fdc831330 147 PANTHER PTHR28055:SF1 1 146 2.1E-49 T 22-04-2016 SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 Pfam PF08534 Redoxin 52 175 7.1E-15 T 22-04-2016 IPR013740 Redoxin GO:0016491 SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 PANTHER PTHR10681 50 181 1.0E-18 T 22-04-2016 SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 PANTHER PTHR10681:SF68 50 181 1.0E-18 T 22-04-2016 SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 SUPERFAMILY SSF52833 1 177 6.71E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS01310 0b7b6d50661f873059cee72158482a08 193 Gene3D G3DSA:3.40.30.10 4 180 2.4E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.3E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.3E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.3E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 3.6E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.6E-18 T 22-04-2016 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 SUPERFAMILY SSF54909 64 153 2.82E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 PANTHER PTHR30154 1 154 8.6E-56 T 22-04-2016 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 PANTHER PTHR30154:SF28 1 154 8.6E-56 T 22-04-2016 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 Gene3D G3DSA:1.10.10.10 3 55 2.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 SUPERFAMILY SSF46785 3 64 1.17E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 SMART SM00344 4 113 7.0E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SAMA_RS17790 b830889d40b363f3f58cdb2173c23e3c 154 Gene3D G3DSA:3.30.70.920 58 141 1.1E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 35 517 1.9E-223 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 SMART SM00382 274 397 0.0015 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 341 355 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 PANTHER PTHR30258:SF9 1 520 0.0 T 22-04-2016 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 SUPERFAMILY SSF160246 35 100 8.37E-16 T 22-04-2016 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 Pfam PF00437 Type II/IV secretion system protein 148 413 8.1E-90 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 PANTHER PTHR30258 1 520 0.0 T 22-04-2016 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 SUPERFAMILY SSF52540 130 517 2.32E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 Gene3D G3DSA:3.30.450.90 116 246 5.0E-55 T 22-04-2016 SAMA_RS00860 d6280c9cdbb4a950bc7699f69cf549ac 520 Gene3D G3DSA:3.40.50.300 252 518 1.3E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11905 382abc277f54796c1d475d37f340763a 359 PIRSF PIRSF020479 1 359 2.3E-97 T 22-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like SAMA_RS11905 382abc277f54796c1d475d37f340763a 359 Pfam PF01584 CheW-like domain 214 347 1.3E-17 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11905 382abc277f54796c1d475d37f340763a 359 SUPERFAMILY SSF50341 211 348 6.41E-17 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11905 382abc277f54796c1d475d37f340763a 359 SMART SM00260 210 345 5.0E-7 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 PANTHER PTHR34875:SF3 1 174 3.0E-53 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 SUPERFAMILY SSF55021 1 82 8.02E-16 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 Gene3D G3DSA:3.30.70.260 88 174 7.9E-15 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 SUPERFAMILY SSF55021 86 174 4.58E-16 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 PANTHER PTHR34875 1 174 3.0E-53 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 PIRSF PIRSF028103 1 175 2.1E-61 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 Gene3D G3DSA:3.30.70.260 1 80 4.1E-27 T 22-04-2016 SAMA_RS09990 767fb096e92b2de8a7c4754240176afc 175 Pfam PF13740 ACT domain 4 78 6.8E-26 T 22-04-2016 SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 PANTHER PTHR23526 8 472 1.8E-152 T 22-04-2016 SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 PANTHER PTHR23526:SF2 8 472 1.8E-152 T 22-04-2016 SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 SUPERFAMILY SSF103473 48 433 5.1E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 Gene3D G3DSA:1.20.1250.20 43 220 2.6E-8 T 22-04-2016 SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 Gene3D G3DSA:1.20.1250.20 240 431 8.6E-13 T 22-04-2016 SAMA_RS01460 c21f40d1fa4654a20fc1b59d54b0d9dd 472 Pfam PF07690 Major Facilitator Superfamily 255 441 1.2E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 PANTHER PTHR30537:SF27 1 299 1.1E-104 T 22-04-2016 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 Gene3D G3DSA:1.10.10.10 8 84 2.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 PANTHER PTHR30537 1 299 1.1E-104 T 22-04-2016 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 Gene3D G3DSA:3.40.190.10 174 260 1.6E-14 T 22-04-2016 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 SUPERFAMILY SSF46785 8 114 3.94E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 SUPERFAMILY SSF53850 91 295 6.52E-42 T 22-04-2016 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 Pfam PF03466 LysR substrate binding domain 91 291 4.6E-37 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 Gene3D G3DSA:3.40.190.10 90 173 8.0E-13 T 22-04-2016 SAMA_RS05360 ac505e46dff6403214e4cc5d6eee757a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.5E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 PANTHER PTHR24220:SF509 8 224 1.9E-108 T 22-04-2016 SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 SUPERFAMILY SSF52540 7 233 3.33E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 SMART SM00382 35 221 5.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 PANTHER PTHR24220 8 224 1.9E-108 T 22-04-2016 SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 Pfam PF00005 ABC transporter 26 172 2.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07730 d81b972bd940c97e0d0186d8e21eda0b 249 Gene3D G3DSA:3.40.50.300 6 237 2.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 Pfam PF02049 Flagellar hook-basal body complex protein FliE 32 111 8.9E-28 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 36 110 2.6E-19 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 PANTHER PTHR34653 1 111 3.9E-26 T 22-04-2016 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 111 16.138 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 96 109 1.4E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 40 56 1.4E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS12030 f0a1b49b91868f84c9923eb9874b77f6 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 75 91 1.4E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 Pfam PF01252 Signal peptidase (SPase) II 15 156 4.3E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.284 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 PANTHER PTHR33695:SF1 1 168 1.2E-60 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 4.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 4.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 4.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 PANTHER PTHR33695 1 168 1.2E-60 T 22-04-2016 SAMA_RS04830 1378c7c4e927cd990b25b7ff86a4cfcf 168 TIGRFAM TIGR00077 lspA: signal peptidase II 7 162 7.3E-47 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SAMA_RS01255 2dd58400d6ee6ff5d565f7e847bd03cf 323 Gene3D G3DSA:3.40.50.2300 146 287 3.6E-7 T 22-04-2016 SAMA_RS07145 fb6c37321316472b3c969f0d639f7db8 195 Pfam PF06042 Nucleotidyltransferase 39 191 1.3E-45 T 22-04-2016 IPR009267 Putative nucleotidyltransferase SAMA_RS07145 fb6c37321316472b3c969f0d639f7db8 195 PANTHER PTHR39166 11 195 1.5E-39 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 Gene3D G3DSA:3.40.50.10490 15 197 1.7E-61 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 Gene3D G3DSA:3.40.50.10490 214 371 2.3E-44 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 PANTHER PTHR32502:SF3 235 382 4.3E-123 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 PANTHER PTHR32502:SF3 16 189 4.3E-123 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 SUPERFAMILY SSF53697 19 368 9.43E-49 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 PANTHER PTHR32502 235 382 4.3E-123 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 PANTHER PTHR32502 16 189 4.3E-123 T 22-04-2016 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 Pfam PF01380 SIS domain 230 310 5.9E-9 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS06265 554094654ff1b48bc54a4b6f529b875a 387 Pfam PF01380 SIS domain 59 196 1.7E-7 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 Gene3D G3DSA:3.40.50.970 2 197 1.3E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 Gene3D G3DSA:3.40.50.920 198 320 4.2E-46 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 SUPERFAMILY SSF52518 3 205 5.54E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 PANTHER PTHR11624 3 325 6.7E-188 T 22-04-2016 IPR033247 Transketolase family SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 Pfam PF02780 Transketolase, C-terminal domain 195 312 5.1E-39 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 SUPERFAMILY SSF52922 189 324 5.5E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 PANTHER PTHR11624:SF21 3 325 6.7E-188 T 22-04-2016 SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 SMART SM00861 4 180 3.7E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS08920 27416a7c16bf5d40ddeded1a56fe37f6 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 3.1E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 Gene3D G3DSA:2.40.170.20 172 373 6.9E-64 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 Gene3D G3DSA:2.40.170.20 410 881 6.9E-64 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 Gene3D G3DSA:2.170.130.10 61 171 2.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 SUPERFAMILY SSF56935 30 472 8.9E-90 T 22-04-2016 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 SUPERFAMILY SSF56935 502 881 8.9E-90 T 22-04-2016 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 PANTHER PTHR40980 1 881 9.3E-145 T 22-04-2016 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 881 2.2E-180 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 Pfam PF00593 TonB dependent receptor 597 879 4.7E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 167 2.6E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS04895 8b9429bca856d36b2b27387cf88f1163 881 PANTHER PTHR40980:SF3 1 881 9.3E-145 T 22-04-2016 SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PANTHER PTHR24322 161 193 4.6E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PANTHER PTHR24322 15 145 4.6E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 Gene3D G3DSA:3.40.50.720 7 264 4.6E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 264 6.2E-59 T 22-04-2016 SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 11 266 7.7E-95 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 SUPERFAMILY SSF51735 9 265 4.37E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02765 df2e2d9753804a53d16a3bce851514d5 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 8.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 PANTHER PTHR30121:SF3 11 441 2.3E-156 T 22-04-2016 SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 SUPERFAMILY SSF52540 8 371 1.69E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 Gene3D G3DSA:3.40.50.300 8 107 1.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 Gene3D G3DSA:3.40.50.300 203 378 1.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 Pfam PF05872 Bacterial protein of unknown function (DUF853) 8 444 1.4E-207 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal SAMA_RS13170 d3744d6b0e8d656d88eae2b25e7dc444 478 PANTHER PTHR30121 11 441 2.3E-156 T 22-04-2016 SAMA_RS11460 c25aae7cd26303ff7459960043818425 197 PANTHER PTHR38764 2 193 1.2E-59 T 22-04-2016 SAMA_RS11460 c25aae7cd26303ff7459960043818425 197 PANTHER PTHR38764:SF1 2 193 1.2E-59 T 22-04-2016 SAMA_RS11460 c25aae7cd26303ff7459960043818425 197 PIRSF PIRSF011489 1 193 5.1E-61 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 SAMA_RS11460 c25aae7cd26303ff7459960043818425 197 Pfam PF04336 Protein of unknown function, DUF479 80 183 1.3E-28 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 SUPERFAMILY SSF46785 1 83 1.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 Gene3D G3DSA:1.10.10.10 1 81 7.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 SUPERFAMILY SSF53850 88 290 1.33E-33 T 22-04-2016 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 Gene3D G3DSA:3.40.190.10 82 200 2.4E-19 T 22-04-2016 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 Pfam PF03466 LysR substrate binding domain 88 290 6.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 Gene3D G3DSA:3.40.190.10 201 258 1.4E-10 T 22-04-2016 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 PANTHER PTHR30126:SF14 1 291 1.6E-148 T 22-04-2016 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17105 2a54d860991aa36418ec59ca14f09539 292 PANTHER PTHR30126 1 291 1.6E-148 T 22-04-2016 SAMA_RS17115 aa76a7e41040acb322b308c7a9915ba2 267 SUPERFAMILY SSF53850 28 257 2.96E-24 T 22-04-2016 SAMA_RS17115 aa76a7e41040acb322b308c7a9915ba2 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 257 3.3E-14 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS17115 aa76a7e41040acb322b308c7a9915ba2 267 PANTHER PTHR35936 57 267 1.8E-12 T 22-04-2016 SAMA_RS17115 aa76a7e41040acb322b308c7a9915ba2 267 Gene3D G3DSA:3.40.190.10 9 128 2.8E-15 T 22-04-2016 SAMA_RS18860 21e948ed77fc7f4cd6ff8aa40347d301 207 PANTHER PTHR30086:SF4 1 203 1.3E-93 T 22-04-2016 SAMA_RS18860 21e948ed77fc7f4cd6ff8aa40347d301 207 PANTHER PTHR30086 1 203 1.3E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS18860 21e948ed77fc7f4cd6ff8aa40347d301 207 PIRSF PIRSF006324 1 207 2.1E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS18860 21e948ed77fc7f4cd6ff8aa40347d301 207 Pfam PF01810 LysE type translocator 16 206 4.2E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Gene3D G3DSA:1.10.287.90 21 107 7.7E-24 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 SUPERFAMILY SSF49503 109 309 1.95E-54 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 185 233 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 117 239 3.3E-38 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 423 497 6.2E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 277 350 2.9E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 SUPERFAMILY SSF81464 20 111 5.72E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Gene3D G3DSA:2.60.40.420 108 290 1.3E-59 T 22-04-2016 IPR008972 Cupredoxin SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Gene3D G3DSA:1.10.760.10 425 517 1.3E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Gene3D G3DSA:1.10.760.10 291 370 6.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 204 221 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 79 91 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 91 111 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 184 204 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 222 239 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 132 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PRINTS PR01166 Cytochrome c oxidase subunit II signature 160 181 4.1E-40 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 31 250 1.7E-55 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PANTHER PTHR22888:SF2 1 281 3.8E-119 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 SUPERFAMILY SSF46626 401 508 1.02E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 PANTHER PTHR22888 1 281 3.8E-119 T 22-04-2016 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 21 102 2.6E-13 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SAMA_RS18115 d0084c99048b97ad4d8ba432d9e31e2c 520 SUPERFAMILY SSF46626 257 365 9.31E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Gene3D G3DSA:3.40.50.300 485 711 6.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Gene3D G3DSA:1.20.1560.10 159 467 7.8E-49 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 PANTHER PTHR24221:SF248 43 84 0.0 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 PANTHER PTHR24221:SF248 141 714 0.0 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Pfam PF00664 ABC transporter transmembrane region 175 434 1.2E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Pfam PF03412 Peptidase C39 family 26 141 3.2E-5 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 23 713 6.4E-282 T 22-04-2016 IPR017750 ATPase, type I secretion system SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 SUPERFAMILY SSF52540 478 711 1.64E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Gene3D G3DSA:3.90.70.10 22 143 5.7E-40 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 Pfam PF00005 ABC transporter 503 652 3.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 SUPERFAMILY SSF90123 159 469 7.98E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 PANTHER PTHR24221 43 84 0.0 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 PANTHER PTHR24221 141 714 0.0 T 22-04-2016 SAMA_RS16965 e2b588c5aad5801e8aa7461bc77872e9 723 SMART SM00382 512 698 8.4E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 SUPERFAMILY SSF53850 24 330 3.56E-73 T 22-04-2016 SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 Gene3D G3DSA:3.40.190.10 120 282 1.3E-61 T 22-04-2016 SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 PIRSF PIRSF002825 7 335 3.6E-87 T 22-04-2016 IPR026045 Ferric binding protein SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 PANTHER PTHR30006 9 335 1.2E-172 T 22-04-2016 SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 Pfam PF13343 Bacterial extracellular solute-binding protein 73 298 5.4E-23 T 22-04-2016 SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 Gene3D G3DSA:3.40.190.10 22 114 1.2E-17 T 22-04-2016 SAMA_RS03520 af128e0bedd2c821a95f123f1619b89e 335 PANTHER PTHR30006:SF4 9 335 1.2E-172 T 22-04-2016 SAMA_RS06310 e7b2873c31eccc716c580b7ba3b36c7f 363 SMART SM01351 223 357 1.7E-75 T 22-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 SAMA_RS06310 e7b2873c31eccc716c580b7ba3b36c7f 363 Gene3D G3DSA:3.40.390.10 198 362 1.4E-54 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS06310 e7b2873c31eccc716c580b7ba3b36c7f 363 Pfam PF14521 Lysine-specific metallo-endopeptidase 228 357 3.9E-48 T 22-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 SAMA_RS06310 e7b2873c31eccc716c580b7ba3b36c7f 363 SUPERFAMILY SSF55486 197 362 3.08E-55 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 22-04-2016 IPR001882 Biotin-binding site SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 PANTHER PTHR18866 1 592 1.3E-214 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 PANTHER PTHR18866:SF109 1 592 1.3E-214 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 Pfam PF00364 Biotin-requiring enzyme 536 596 7.4E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 Gene3D G3DSA:2.40.50.100 532 598 1.7E-24 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 Pfam PF00682 HMGL-like 5 270 1.4E-55 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 Pfam PF02436 Conserved carboxylase domain 292 491 5.1E-58 T 22-04-2016 IPR003379 Carboxylase, conserved domain SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 593 1.0E-264 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 SUPERFAMILY SSF51230 532 598 1.44E-20 T 22-04-2016 IPR011053 Single hybrid motif SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 SUPERFAMILY SSF51569 1 300 3.85E-88 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 SUPERFAMILY SSF89000 297 460 1.49E-48 T 22-04-2016 SAMA_RS05520 06bf09e01ff0d4a3d25389f33112a327 599 Gene3D G3DSA:3.20.20.70 2 282 7.7E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 SUPERFAMILY SSF46548 336 447 9.16E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Pfam PF13237 4Fe-4S dicluster domain 376 429 2.3E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 PANTHER PTHR11780 18 484 2.1E-221 T 22-04-2016 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 3.5E-185 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Pfam PF10531 SLBB domain 298 345 2.7E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 138 285 2.3E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 SUPERFAMILY SSF142019 96 305 2.22E-58 T 22-04-2016 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 418 429 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 PANTHER PTHR11780:SF1 18 484 2.1E-221 T 22-04-2016 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 5.5E-27 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 797 224.828 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SAMA_RS09595 3f4dadaeeca307c40a5d0c787e1a03e2 880 Gene3D G3DSA:1.10.1060.10 368 452 6.2E-16 T 22-04-2016 SAMA_RS07260 c4a98ccc836b6f35f787f09d8d1b24f8 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 175 1.4E-64 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 Pfam PF12706 Beta-lactamase superfamily domain 83 277 1.3E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 PANTHER PTHR15032:SF4 40 329 3.0E-106 T 22-04-2016 SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 Gene3D G3DSA:3.60.15.10 45 329 2.5E-99 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 PANTHER PTHR15032 40 329 3.0E-106 T 22-04-2016 SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 SUPERFAMILY SSF56281 169 318 4.19E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS04160 63b66d409feaed9d8b4f61ac3f5d1019 333 SUPERFAMILY SSF56281 67 142 4.19E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 SUPERFAMILY SSF52317 39 254 4.22E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 Gene3D G3DSA:3.40.50.880 12 255 2.0E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 PANTHER PTHR11922:SF18 48 78 1.3E-51 T 22-04-2016 SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 PANTHER PTHR11922:SF18 94 254 1.3E-51 T 22-04-2016 SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 PANTHER PTHR11922 48 78 1.3E-51 T 22-04-2016 SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 PANTHER PTHR11922 94 254 1.3E-51 T 22-04-2016 SAMA_RS04165 374ed7e1edd21fc2e89c8634b7b59fb9 267 Pfam PF07722 Peptidase C26 14 231 3.2E-66 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 Pfam PF03466 LysR substrate binding domain 89 291 2.8E-22 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 Gene3D G3DSA:1.10.10.10 5 87 2.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 SUPERFAMILY SSF53850 91 291 2.53E-22 T 22-04-2016 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 PANTHER PTHR30126:SF29 1 291 2.4E-65 T 22-04-2016 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 Gene3D G3DSA:3.40.190.10 168 255 8.7E-12 T 22-04-2016 SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 SUPERFAMILY SSF46785 5 86 3.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14880 6360fd241360e073d6e7af2363985f90 296 PANTHER PTHR30126 1 291 2.4E-65 T 22-04-2016 SAMA_RS15495 c9ac366fb416ce234b6921e7592952bb 206 Pfam PF00881 Nitroreductase family 12 182 1.1E-22 T 22-04-2016 IPR029479 Nitroreductase SAMA_RS15495 c9ac366fb416ce234b6921e7592952bb 206 Gene3D G3DSA:3.40.109.10 12 204 3.8E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS15495 c9ac366fb416ce234b6921e7592952bb 206 PANTHER PTHR23026:SF90 12 206 5.3E-42 T 22-04-2016 SAMA_RS15495 c9ac366fb416ce234b6921e7592952bb 206 SUPERFAMILY SSF55469 12 205 1.16E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS15495 c9ac366fb416ce234b6921e7592952bb 206 PANTHER PTHR23026 12 206 5.3E-42 T 22-04-2016 SAMA_RS07475 844a5065852d3df0b90dfaae4bbc5f47 146 PANTHER PTHR13308 1 140 2.6E-20 T 22-04-2016 SAMA_RS07475 844a5065852d3df0b90dfaae4bbc5f47 146 SUPERFAMILY SSF52540 3 130 1.33E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07475 844a5065852d3df0b90dfaae4bbc5f47 146 Gene3D G3DSA:3.40.50.300 1 145 5.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07475 844a5065852d3df0b90dfaae4bbc5f47 146 PANTHER PTHR13308:SF11 1 140 2.6E-20 T 22-04-2016 SAMA_RS07475 844a5065852d3df0b90dfaae4bbc5f47 146 Pfam PF13671 AAA domain 5 145 4.1E-9 T 22-04-2016 SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 Gene3D G3DSA:3.30.1330.60 166 293 1.5E-30 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 56 9.8E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 PANTHER PTHR30329 99 310 1.3E-104 T 22-04-2016 SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 PANTHER PTHR30329 1 69 1.3E-104 T 22-04-2016 SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 PANTHER PTHR30329:SF4 99 310 1.3E-104 T 22-04-2016 SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 PANTHER PTHR30329:SF4 1 69 1.3E-104 T 22-04-2016 SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 SUPERFAMILY SSF103088 176 293 6.41E-30 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS12705 a486dd8b9fb035d4d547b6c7bba68590 312 Pfam PF00691 OmpA family 189 287 4.0E-17 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS11095 a83ec9a7a13f0d61f6007c13645d0be4 316 SUPERFAMILY SSF50939 24 126 2.68E-5 T 22-04-2016 IPR011040 Sialidases SAMA_RS11095 a83ec9a7a13f0d61f6007c13645d0be4 316 Gene3D G3DSA:2.120.10.10 23 117 1.1E-7 T 22-04-2016 IPR011040 Sialidases SAMA_RS19135 daf38cc81c63bccc452b434a5121beee 394 Pfam PF10972 Peptidoglycan-binding protein, CsiV 5 360 4.3E-73 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 SUPERFAMILY SSF53218 4 158 1.96E-47 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 PANTHER PTHR10192 1 175 1.3E-90 T 22-04-2016 SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 Pfam PF00994 Probable molybdopterin binding domain 7 151 1.9E-31 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 2.8E-39 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 SMART SM00852 7 153 6.0E-29 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS00345 0a383885f9e03c1979276d3eb3420f55 176 Gene3D G3DSA:3.40.980.10 3 165 8.2E-59 T 22-04-2016 IPR001453 MoaB/Mog domain SAMA_RS17125 aa80fadac1a87b4d97e481ac1a2933bb 337 Pfam PF13407 Periplasmic binding protein domain 134 270 9.2E-26 T 22-04-2016 IPR025997 Periplasmic binding protein SAMA_RS17125 aa80fadac1a87b4d97e481ac1a2933bb 337 SUPERFAMILY SSF53822 27 272 1.2E-32 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS17125 aa80fadac1a87b4d97e481ac1a2933bb 337 PANTHER PTHR32196 127 269 5.1E-15 T 22-04-2016 SAMA_RS17125 aa80fadac1a87b4d97e481ac1a2933bb 337 Gene3D G3DSA:3.40.50.2300 138 288 2.9E-31 T 22-04-2016 SAMA_RS17125 aa80fadac1a87b4d97e481ac1a2933bb 337 PANTHER PTHR32196:SF9 127 269 5.1E-15 T 22-04-2016 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 112 2.7E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 PANTHER PTHR11921 3 242 2.1E-117 T 22-04-2016 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 234 5.7E-52 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 PANTHER PTHR11921:SF13 3 242 2.1E-117 T 22-04-2016 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 SUPERFAMILY SSF46548 112 238 6.98E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 Pfam PF13183 4Fe-4S dicluster domain 149 223 1.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 Gene3D G3DSA:3.10.20.30 5 106 7.4E-34 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 SUPERFAMILY SSF54292 4 106 9.96E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS16765 7d37a0ac1422f8f57531f87e934e6846 242 Gene3D G3DSA:1.10.1060.10 114 238 1.2E-27 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 416 522 1.3E-8 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 443 462 9.0E-9 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 473 491 9.0E-9 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 56 75 9.0E-9 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 413 432 9.0E-9 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PANTHER PTHR10046:SF46 246 527 1.7E-125 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 Pfam PF13654 AAA domain 181 306 6.8E-17 T 22-04-2016 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 PANTHER PTHR10046 246 527 1.7E-125 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 SUPERFAMILY SSF54211 332 521 1.4E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS08370 abc09efcabe084d201a1c87e3dc33511 576 Gene3D G3DSA:3.30.230.10 327 522 5.7E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS04840 bfdcfe561908733598fa76610ebca9b7 309 PANTHER PTHR30426 1 309 1.9E-156 T 22-04-2016 SAMA_RS04840 bfdcfe561908733598fa76610ebca9b7 309 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.306 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SAMA_RS04840 bfdcfe561908733598fa76610ebca9b7 309 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 283 1.6E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SAMA_RS04840 bfdcfe561908733598fa76610ebca9b7 309 Pfam PF02401 LytB protein 3 282 9.8E-93 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 Gene3D G3DSA:3.40.50.10490 158 235 1.6E-63 T 22-04-2016 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 Gene3D G3DSA:3.40.50.10490 23 99 1.6E-63 T 22-04-2016 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 SUPERFAMILY SSF52313 6 232 3.14E-95 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PANTHER PTHR12534 1 234 2.0E-121 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 Pfam PF00318 Ribosomal protein S2 9 223 6.5E-93 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.109 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 2.4E-105 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SAMA_RS05970 40358f3bdc50d3e4592551f20f61f9c1 242 Gene3D G3DSA:1.10.287.610 100 152 6.2E-27 T 22-04-2016 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 40.248 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:1.10.486.10 383 523 1.8E-39 T 22-04-2016 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:3.40.50.300 280 382 6.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:3.40.50.300 551 638 6.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 PANTHER PTHR11070:SF19 1 668 0.0 T 22-04-2016 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.4E-76 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:3.40.50.300 2 104 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:3.40.50.300 182 279 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Gene3D G3DSA:1.10.10.160 108 181 5.3E-19 T 22-04-2016 IPR013986 DExx box DNA helicase domain SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 PANTHER PTHR11070 1 668 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 SUPERFAMILY SSF52540 1 637 9.57E-163 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17020 328be7a0d5c5f1e06ac747044afc8f2f 670 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 2.3E-73 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SAMA_RS09675 58f1e587150f9d1ec4b63bdce1771f6f 500 SUPERFAMILY SSF54001 186 264 1.55E-6 T 22-04-2016 SAMA_RS09675 58f1e587150f9d1ec4b63bdce1771f6f 500 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 497 2.0E-136 T 22-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase SAMA_RS09675 58f1e587150f9d1ec4b63bdce1771f6f 500 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 182 2.6E-44 T 22-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices SAMA_RS12535 2610c2f8fe04c49a14d523a66d4a68e2 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 2.3E-37 T 22-04-2016 IPR021724 Protein of unknown function DUF3297 SAMA_RS06540 950a910a297cae86735aff3b69a122fe 257 Pfam PF01925 Sulfite exporter TauE/SafE 13 250 3.6E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS06540 950a910a297cae86735aff3b69a122fe 257 PANTHER PTHR30269 6 257 2.2E-128 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS06540 950a910a297cae86735aff3b69a122fe 257 PANTHER PTHR30269:SF25 6 257 2.2E-128 T 22-04-2016 SAMA_RS18265 ac64bc7011668ae5c75348b9469d5cbc 157 SUPERFAMILY SSF52833 5 156 4.19E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18265 ac64bc7011668ae5c75348b9469d5cbc 157 PANTHER PTHR10430 1 157 1.3E-97 T 22-04-2016 SAMA_RS18265 ac64bc7011668ae5c75348b9469d5cbc 157 PANTHER PTHR10430:SF14 1 157 1.3E-97 T 22-04-2016 SAMA_RS18265 ac64bc7011668ae5c75348b9469d5cbc 157 Pfam PF08534 Redoxin 4 154 5.4E-37 T 22-04-2016 IPR013740 Redoxin GO:0016491 SAMA_RS18265 ac64bc7011668ae5c75348b9469d5cbc 157 Gene3D G3DSA:3.40.30.10 1 157 2.6E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 1.9E-44 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 SUPERFAMILY SSF55120 60 226 1.57E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 PANTHER PTHR21600 2 229 8.4E-66 T 22-04-2016 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 SUPERFAMILY SSF55174 1 55 1.01E-11 T 22-04-2016 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 Gene3D G3DSA:3.10.290.10 1 63 7.2E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 PANTHER PTHR21600:SF19 2 229 8.4E-66 T 22-04-2016 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 Pfam PF00849 RNA pseudouridylate synthase 61 191 5.9E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 SMART SM00363 1 58 2.1E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS13700 9772d880fee1a4b8311612ae39a08d0e 230 Pfam PF01479 S4 domain 1 47 6.4E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS13965 df8ef840ff9ab6744dbb072d078127e3 299 Pfam PF03994 Domain of Unknown Function (DUF350) 92 147 1.8E-7 T 22-04-2016 IPR007140 Protein of unknown function DUF350 SAMA_RS08445 dd3be1938e640ebaae0d01ec39d87173 610 PANTHER PTHR12815:SF12 28 610 8.1E-220 T 22-04-2016 SAMA_RS08445 dd3be1938e640ebaae0d01ec39d87173 610 Pfam PF01103 Surface antigen 286 608 2.0E-31 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SAMA_RS08445 dd3be1938e640ebaae0d01ec39d87173 610 PANTHER PTHR12815 28 610 8.1E-220 T 22-04-2016 SAMA_RS08445 dd3be1938e640ebaae0d01ec39d87173 610 Gene3D G3DSA:2.40.160.50 409 607 1.7E-16 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 PANTHER PTHR32089 140 665 6.3E-122 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 SMART SM00283 403 664 1.2E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 663 6.3E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 SMART SM00304 334 388 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Gene3D G3DSA:3.30.450.20 94 180 9.2E-15 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Pfam PF00672 HAMP domain 317 384 3.8E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Gene3D G3DSA:1.10.287.950 418 633 2.9E-54 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 SUPERFAMILY SSF58104 356 665 4.05E-72 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Gene3D G3DSA:3.30.450.20 181 312 1.3E-13 T 22-04-2016 SAMA_RS13190 f52e0c8b43083d90dc94870d3c242c73 665 Pfam PF02743 Cache domain 48 295 2.8E-24 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 Gene3D G3DSA:3.90.1150.10 259 366 8.4E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 SUPERFAMILY SSF53383 12 368 5.05E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 221 230 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 Pfam PF00155 Aminotransferase class I and II 31 363 5.0E-44 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 PANTHER PTHR13693:SF53 31 366 9.1E-128 T 22-04-2016 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 Gene3D G3DSA:3.40.640.10 49 258 4.0E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS07490 c8419df3479efa34e9d4a988929b8874 385 PANTHER PTHR13693 31 366 9.1E-128 T 22-04-2016 SAMA_RS05995 a7d2c85eeaa046fd8c7b50a82e8a6d7f 285 PANTHER PTHR13773 2 285 1.1E-72 T 22-04-2016 SAMA_RS05995 a7d2c85eeaa046fd8c7b50a82e8a6d7f 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 241 267 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SAMA_RS05995 a7d2c85eeaa046fd8c7b50a82e8a6d7f 285 Pfam PF01148 Cytidylyltransferase family 3 280 5.9E-62 T 22-04-2016 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.7E-172 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Gene3D G3DSA:3.30.1490.20 22 95 9.0E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Pfam PF00549 CoA-ligase 262 382 1.3E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Pfam PF08442 ATP-grasp domain 2 203 4.4E-79 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Gene3D G3DSA:3.40.50.261 241 383 6.6E-67 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 SUPERFAMILY SSF52210 240 384 8.37E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.16 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 SUPERFAMILY SSF56059 1 237 6.28E-80 T 22-04-2016 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 Gene3D G3DSA:3.30.470.20 96 239 6.6E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 PANTHER PTHR11815 1 388 2.7E-228 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SAMA_RS07440 e691ecec6ba4a15cd5ee6c31e59ee026 388 PIRSF PIRSF001554 1 388 4.3E-152 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 103 270 1.1E-49 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 PRINTS PR01755 Bacterial translocase SecF protein signature 189 207 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 PRINTS PR01755 Bacterial translocase SecF protein signature 31 46 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 PRINTS PR01755 Bacterial translocase SecF protein signature 141 155 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 PRINTS PR01755 Bacterial translocase SecF protein signature 221 236 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 Pfam PF02355 Protein export membrane protein 98 274 1.8E-56 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 PANTHER PTHR30081 4 276 2.2E-55 T 22-04-2016 SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 Gene3D G3DSA:1.20.1640.10 108 272 1.3E-26 T 22-04-2016 SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 Pfam PF07549 SecD/SecF GG Motif 27 42 4.5E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 4 284 22.907 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 32 270 3.9E-66 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SAMA_RS13040 25d1adc4cacfae2ab9632d73e5cc5d3f 301 SUPERFAMILY SSF82866 87 279 6.54E-37 T 22-04-2016 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 Gene3D G3DSA:3.30.160.20 11 74 1.6E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 2.4E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 PANTHER PTHR13718 11 167 4.1E-84 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 SUPERFAMILY SSF54768 10 78 1.67E-24 T 22-04-2016 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 Gene3D G3DSA:3.30.230.10 79 160 1.4E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 SUPERFAMILY SSF54211 81 160 5.56E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 165 3.4E-71 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 35.531 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01210 811e9ceabe539169a4a12ad771763f4b 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 5.3E-30 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 Pfam PF03644 Glycosyl hydrolase family 85 104 448 1.4E-82 T 22-04-2016 IPR005201 Glycoside hydrolase, family 85 GO:0005737|GO:0033925 KEGG: 00511+3.2.1.96 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246:SF1 231 278 3.7E-53 T 22-04-2016 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246:SF1 295 378 3.7E-53 T 22-04-2016 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246:SF1 395 497 3.7E-53 T 22-04-2016 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246:SF1 64 211 3.7E-53 T 22-04-2016 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246 231 278 3.7E-53 T 22-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246 295 378 3.7E-53 T 22-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246 395 497 3.7E-53 T 22-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 SAMA_RS01615 31cd998a5a86ad589739b7a06ac254a8 592 PANTHER PTHR13246 64 211 3.7E-53 T 22-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 PANTHER PTHR10029:SF4 1 767 0.0 T 22-04-2016 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Pfam PF07503 HypF finger 109 142 2.3E-16 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Pfam PF07503 HypF finger 159 191 5.3E-18 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 PIRSF PIRSF006256 1 771 3.1E-269 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Pfam PF00708 Acylphosphatase 1 90 5.8E-21 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Gene3D G3DSA:3.90.870.10 207 393 1.1E-49 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 PANTHER PTHR10029 1 767 0.0 T 22-04-2016 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 SUPERFAMILY SSF54975 4 81 2.05E-20 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 763 9.3E-219 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 SUPERFAMILY SSF55821 176 404 7.32E-49 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Gene3D G3DSA:3.30.70.100 2 90 7.6E-21 T 22-04-2016 SAMA_RS08740 e60e59f24de09f579d5f3094fd4c762d 771 Pfam PF01300 Telomere recombination 213 397 2.9E-55 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS08030 b6fb287e9f3e2436864b47e3b784900a 230 SMART SM00702 2 219 6.5E-5 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 SAMA_RS08030 b6fb287e9f3e2436864b47e3b784900a 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 127 218 5.7E-12 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SAMA_RS08030 b6fb287e9f3e2436864b47e3b784900a 230 PANTHER PTHR10869 6 47 1.6E-14 T 22-04-2016 SAMA_RS08030 b6fb287e9f3e2436864b47e3b784900a 230 PANTHER PTHR10869 129 227 1.6E-14 T 22-04-2016 SAMA_RS15045 80bafdf4208bab6105a4ad973ae91ecd 178 PANTHER PTHR38030:SF2 1 178 3.5E-63 T 22-04-2016 SAMA_RS15045 80bafdf4208bab6105a4ad973ae91ecd 178 Gene3D G3DSA:3.40.50.360 2 172 5.2E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS15045 80bafdf4208bab6105a4ad973ae91ecd 178 SUPERFAMILY SSF52218 3 163 2.1E-27 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS15045 80bafdf4208bab6105a4ad973ae91ecd 178 PANTHER PTHR38030 1 178 3.5E-63 T 22-04-2016 SAMA_RS15045 80bafdf4208bab6105a4ad973ae91ecd 178 Pfam PF12724 Flavodoxin domain 5 151 3.7E-48 T 22-04-2016 IPR026816 Flavodoxin domain SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 SUPERFAMILY SSF50341 16 161 2.75E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 PANTHER PTHR22617:SF37 1 173 1.0E-88 T 22-04-2016 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 Gene3D G3DSA:3.40.50.2300 182 310 2.8E-24 T 22-04-2016 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 Pfam PF00072 Response regulator receiver domain 186 304 5.4E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 Gene3D G3DSA:2.40.50.180 61 106 7.0E-5 T 22-04-2016 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 SMART SM00260 17 157 1.3E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 SMART SM00448 183 304 3.5E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 SUPERFAMILY SSF52172 179 309 1.42E-22 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 PANTHER PTHR22617 1 173 1.0E-88 T 22-04-2016 SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 PIRSF PIRSF002867 1 311 6.4E-103 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SAMA_RS10600 96b1ca8c5749c13bcc042a0abf89f9a3 314 Pfam PF01584 CheW-like domain 21 159 2.1E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SMART SM00474 324 511 1.9E-46 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SUPERFAMILY SSF47807 171 290 6.13E-26 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 4.6E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PANTHER PTHR10133 1 288 0.0 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PANTHER PTHR10133 310 922 0.0 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 8.2E-56 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Pfam PF00476 DNA polymerase family A 546 920 4.9E-155 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SMART SM00475 7 268 8.4E-123 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:3.30.420.10 322 536 9.5E-88 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:3.30.70.370 813 923 5.2E-67 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:3.30.70.370 658 705 5.2E-67 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Pfam PF01612 3'-5' exonuclease 324 510 4.7E-42 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PANTHER PTHR10133:SF27 1 288 0.0 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PANTHER PTHR10133:SF27 310 922 0.0 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SUPERFAMILY SSF53098 328 511 6.33E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:1.20.1060.10 537 657 3.6E-35 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SUPERFAMILY SSF56672 516 923 6.89E-156 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:1.10.150.20 187 253 3.9E-20 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SUPERFAMILY SSF88723 6 170 1.65E-55 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SMART SM00279 173 208 5.0E-10 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 SMART SM00482 680 887 2.1E-117 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:3.40.50.1010 8 186 7.7E-70 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 ProSitePatterns PS00447 DNA polymerase family A signature. 748 767 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 Gene3D G3DSA:1.10.150.20 706 812 7.3E-37 T 22-04-2016 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 TIGRFAM TIGR00593 pola: DNA polymerase I 9 923 1.1E-282 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 807 818 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 748 773 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 839 855 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 672 687 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 717 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 671 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 870 883 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 796 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00470 ba07fbb2049d5b698ea51f57310ab711 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 737 2.8E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 SUPERFAMILY SSF53335 577 687 2.54E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 SUPERFAMILY SSF53335 464 550 2.54E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 Gene3D G3DSA:3.90.1580.10 185 459 1.6E-56 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 PANTHER PTHR23150 1 489 5.5E-198 T 22-04-2016 SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 9 452 2.2E-211 T 22-04-2016 IPR027577 5-histidylcysteine sulfoxide synthase SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 467 707 6.1E-105 T 22-04-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 Pfam PF12867 DinB superfamily 28 163 1.6E-10 T 22-04-2016 IPR024775 DinB-like domain SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 PANTHER PTHR23150:SF24 1 489 5.5E-198 T 22-04-2016 SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 Pfam PF03781 Sulfatase-modifying factor enzyme 1 196 452 2.8E-30 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 SUPERFAMILY SSF56436 193 453 2.19E-61 T 22-04-2016 IPR016187 C-type lectin fold SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 Gene3D G3DSA:3.40.50.150 494 681 1.2E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17805 f37c7085b49b8c80b88b2fb578bf6ed5 709 Pfam PF08242 Methyltransferase domain 512 633 3.1E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 SMART SM00411 1 90 8.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 8.3E-23 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 PANTHER PTHR33175 1 89 1.1E-32 T 22-04-2016 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 Gene3D G3DSA:4.10.520.10 1 89 5.2E-25 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.0E-8 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.0E-8 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.0E-8 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 SUPERFAMILY SSF47729 1 90 3.83E-24 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS08420 8f15baaa59694092deb118cc3d68725e 91 PANTHER PTHR33175:SF4 1 89 1.1E-32 T 22-04-2016 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 PANTHER PTHR23502:SF28 9 411 8.0E-148 T 22-04-2016 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 PANTHER PTHR23502 9 411 8.0E-148 T 22-04-2016 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 Pfam PF07690 Major Facilitator Superfamily 18 352 2.3E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 SUPERFAMILY SSF103473 6 383 1.11E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 Gene3D G3DSA:1.20.1250.20 13 198 4.1E-28 T 22-04-2016 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 Gene3D G3DSA:1.20.1250.20 215 387 1.9E-5 T 22-04-2016 SAMA_RS09300 dd20a7d565d507e4ca4313c7fb093f1d 433 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 382 1.7E-82 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 PANTHER PTHR10366:SF256 282 560 2.6E-129 T 22-04-2016 SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 Gene3D G3DSA:3.90.25.10 468 551 2.6E-5 T 22-04-2016 SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 Gene3D G3DSA:3.40.50.720 281 467 2.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 PANTHER PTHR10366 282 560 2.6E-129 T 22-04-2016 SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 Pfam PF02719 Polysaccharide biosynthesis protein 283 576 3.9E-128 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 SUPERFAMILY SSF51735 280 538 8.13E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 Gene3D G3DSA:3.40.50.720 144 220 3.4E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 SUPERFAMILY SSF53335 110 327 1.83E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS11760 0819d607d5cba9f7ea950806bd02d4c8 644 Pfam PF13727 CoA-binding domain 69 236 1.4E-7 T 22-04-2016 SAMA_RS17965 dd2135365c67b9da42c2cc9a14ce2adb 145 Gene3D G3DSA:1.10.3680.10 15 142 3.5E-19 T 22-04-2016 IPR029024 TerB-like SAMA_RS17965 dd2135365c67b9da42c2cc9a14ce2adb 145 SUPERFAMILY SSF158682 18 143 2.22E-25 T 22-04-2016 IPR029024 TerB-like SAMA_RS17965 dd2135365c67b9da42c2cc9a14ce2adb 145 Pfam PF05099 Tellurite resistance protein TerB 10 139 6.7E-33 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 SUPERFAMILY SSF74653 112 190 1.07E-24 T 22-04-2016 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 Gene3D G3DSA:3.30.1150.10 100 200 1.8E-15 T 22-04-2016 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 120 198 1.9E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 121 198 1.7E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 PANTHER PTHR33446:SF1 115 202 1.4E-21 T 22-04-2016 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 PANTHER PTHR33446 115 202 1.4E-21 T 22-04-2016 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 172 2.2E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 61 71 2.2E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS17980 c49537ab3b6779daaad486733dd7932b 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 136 154 2.2E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 SUPERFAMILY SSF56322 29 449 1.83E-102 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 102 449 5.5E-98 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 451 38.414 T 22-04-2016 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 Pfam PF00425 chorismate binding enzyme 190 441 9.4E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 PANTHER PTHR11236:SF3 42 449 5.6E-132 T 22-04-2016 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 PANTHER PTHR11236 42 449 5.6E-132 T 22-04-2016 SAMA_RS00655 6611d5253c16b999865a567b5d4843e8 452 Gene3D G3DSA:3.60.120.10 18 449 7.8E-91 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 PIRSF PIRSF000090 1 249 9.5E-80 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 3.7E-43 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 SMART SM00893 23 211 8.1E-62 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 Gene3D G3DSA:3.40.50.620 1 247 4.4E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 PANTHER PTHR21294 1 249 2.0E-141 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 SUPERFAMILY SSF52402 1 242 3.28E-80 T 22-04-2016 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 SAMA_RS06130 8fa98d24b98dbe1de9c289f1e658bfde 249 PANTHER PTHR21294:SF8 1 249 2.0E-141 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 SUPERFAMILY SSF111369 38 91 1.57E-6 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 Pfam PF13437 HlyD family secretion protein 198 275 1.5E-6 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 PANTHER PTHR32347 22 312 2.8E-52 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 PANTHER PTHR32347:SF12 22 312 2.8E-52 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 Gene3D G3DSA:2.40.50.100 195 228 3.9E-8 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 Gene3D G3DSA:2.40.50.100 45 68 3.9E-8 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 SUPERFAMILY SSF111369 104 160 2.35E-5 T 22-04-2016 SAMA_RS18645 d1f4c4dbcf31e03824cfccb00efb4731 320 Pfam PF13533 Biotin-lipoyl like 45 83 7.0E-9 T 22-04-2016 SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 199 1.6E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 SUPERFAMILY SSF47616 79 207 2.78E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 Gene3D G3DSA:3.40.30.10 1 87 7.7E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 PANTHER PTHR11260 1 209 2.3E-45 T 22-04-2016 SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 Gene3D G3DSA:1.20.1050.10 88 205 2.4E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 78 2.7E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 PANTHER PTHR11260:SF157 1 209 2.3E-45 T 22-04-2016 SAMA_RS05700 690177b9c1c1e7abc1386461ebae1228 209 SUPERFAMILY SSF52833 1 89 7.78E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 425 2.3E-166 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 Gene3D G3DSA:2.40.50.140 30 128 1.6E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 SUPERFAMILY SSF50249 39 128 8.19E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 Pfam PF10150 Ribonuclease E/G family 124 392 2.0E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 SMART SM00316 37 122 3.6E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 Pfam PF00575 S1 RNA binding domain 38 109 2.4E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 SAMA_RS02525 25d5e2b618c0ab6fc53ba0a0916d111b 488 PANTHER PTHR30001 4 488 5.1E-220 T 22-04-2016 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 320 2.2E-32 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 PANTHER PTHR18919 27 323 1.8E-113 T 22-04-2016 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 62.549 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 PANTHER PTHR18919:SF109 27 323 1.8E-113 T 22-04-2016 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 104 181 1.2E-29 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 Gene3D G3DSA:3.40.47.10 159 320 1.7E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 Gene3D G3DSA:3.40.47.10 1 158 7.6E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 320 3.3E-100 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS07940 1a8c381b6b36449dc638a57ecf040549 354 SUPERFAMILY SSF53901 4 321 5.03E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 SUPERFAMILY SSF46785 2 138 1.78E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 Pfam PF01047 MarR family 36 88 1.5E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 SMART SM00347 24 124 2.8E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 PANTHER PTHR33164 1 140 1.0E-27 T 22-04-2016 SAMA_RS09155 834408316f146d4f40b0ff7d42e6684d 142 Gene3D G3DSA:1.10.10.10 2 140 5.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05645 cc48a53413b71f4dd7ea7e9425b41c61 301 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 138 156 4.4E-14 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS05645 cc48a53413b71f4dd7ea7e9425b41c61 301 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 100 116 4.4E-14 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS05645 cc48a53413b71f4dd7ea7e9425b41c61 301 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 82 96 4.4E-14 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS05645 cc48a53413b71f4dd7ea7e9425b41c61 301 Pfam PF01752 Collagenase 22 279 3.1E-75 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 SUPERFAMILY SSF103491 15 421 4.32E-133 T 22-04-2016 IPR023201 SecY subunit domain SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 22-04-2016 IPR030659 SecY conserved site SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 Gene3D G3DSA:1.10.3370.10 15 434 7.8E-165 T 22-04-2016 IPR023201 SecY subunit domain SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PIRSF PIRSF004557 9 436 4.7E-122 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 22-04-2016 IPR030659 SecY conserved site SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PANTHER PTHR10906 16 443 3.5E-230 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 426 3.2E-134 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PANTHER PTHR10906:SF2 16 443 3.5E-230 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 367 385 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 312 334 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 4.0E-93 T 22-04-2016 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 Pfam PF00344 SecY translocase 75 414 2.0E-118 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SAMA_RS01225 d674e0fc4a91dd91a90410083327eb43 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 430 29.691 T 22-04-2016 IPR026593 Protein translocase subunit SecY SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 PANTHER PTHR38834:SF1 7 238 3.8E-69 T 22-04-2016 SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 Gene3D G3DSA:3.40.190.10 141 196 3.1E-9 T 22-04-2016 SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 PANTHER PTHR38834 7 238 3.8E-69 T 22-04-2016 SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 SMART SM00062 29 248 1.6E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 238 1.4E-21 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 SUPERFAMILY SSF53850 30 238 1.27E-36 T 22-04-2016 SAMA_RS02290 3ff711740ead31b81b4995189d8bbf7f 256 Gene3D G3DSA:3.40.190.10 34 140 3.1E-15 T 22-04-2016 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 SUPERFAMILY SSF57770 142 176 3.53E-13 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Gene3D G3DSA:2.40.50.140 567 675 1.7E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 3.3E-160 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Gene3D G3DSA:2.20.28.20 145 176 1.5E-20 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 544 41.112 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PANTHER PTHR11946:SF86 5 630 6.5E-252 T 22-04-2016 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 534 2.8E-189 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 SUPERFAMILY SSF50249 569 674 1.84E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Pfam PF01588 Putative tRNA binding domain 580 672 9.4E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Gene3D G3DSA:3.40.50.620 183 379 1.8E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Gene3D G3DSA:3.40.50.620 6 144 1.8E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 PANTHER PTHR11946 5 630 6.5E-252 T 22-04-2016 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 675 1.3E-45 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 Gene3D G3DSA:1.10.730.10 380 533 3.1E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 SUPERFAMILY SSF47323 389 546 1.26E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 SUPERFAMILY SSF52374 5 141 8.21E-101 T 22-04-2016 SAMA_RS10685 7140c5daa9349e562b43552e198df53c 675 SUPERFAMILY SSF52374 176 387 8.21E-101 T 22-04-2016 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 975 4.6E-158 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Pfam PF01336 OB-fold nucleic acid binding domain 940 1014 8.5E-9 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 SUPERFAMILY SSF89550 1 79 1.57E-9 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 PANTHER PTHR32294:SF4 1 1020 0.0 T 22-04-2016 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Pfam PF02811 PHP domain 4 104 5.6E-15 T 22-04-2016 IPR004013 PHP domain GO:0003824 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 PANTHER PTHR32294 1 1020 0.0 T 22-04-2016 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 280 697 2.0E-136 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Pfam PF14579 Helix-hairpin-helix motif 771 857 6.5E-16 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Gene3D G3DSA:2.40.50.140 926 1003 4.4E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 SMART SM00481 3 70 6.1E-13 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Gene3D G3DSA:3.20.20.140 1 72 7.7E-9 T 22-04-2016 SAMA_RS09755 b5d82e31a6fbbd02896f38199e5c9917 1030 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 2 1030 13.121 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 PIRSF PIRSF035805 1 190 3.2E-54 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.803 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 Gene3D G3DSA:3.30.60.20 142 188 3.8E-16 T 22-04-2016 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 SUPERFAMILY SSF57716 142 191 2.14E-15 T 22-04-2016 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 SUPERFAMILY SSF52540 2 141 9.15E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 Pfam PF00265 Thymidine kinase 2 186 6.0E-60 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SAMA_RS06150 8d09e59aa91158e2f8b1a44cac22bd47 192 PANTHER PTHR11441 1 192 6.0E-76 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 PANTHER PTHR22911 4 292 7.7E-141 T 22-04-2016 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 Pfam PF00892 EamA-like transporter family 6 142 6.4E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 Pfam PF00892 EamA-like transporter family 156 286 1.4E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 PANTHER PTHR22911:SF58 4 292 7.7E-141 T 22-04-2016 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 SUPERFAMILY SSF103481 190 291 8.11E-8 T 22-04-2016 SAMA_RS13110 45495f6658d9cca9cc428c6a02c6ffa3 303 SUPERFAMILY SSF103481 51 145 5.89E-8 T 22-04-2016 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 PIRSF PIRSF000847 1 182 2.7E-43 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 PANTHER PTHR14269:SF13 2 180 2.5E-89 T 22-04-2016 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.9E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 3.9E-53 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SAMA_RS08395 7e5c9685afb08dae2bb496edacbb8db1 182 PANTHER PTHR14269 2 180 2.5E-89 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 586 5.3E-31 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 964 2.9E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Gene3D G3DSA:3.30.1330.10 210 419 1.7E-40 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Gene3D G3DSA:3.30.1330.10 643 808 8.2E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF109736 154 219 1.18E-21 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1290 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1038 1289 8.3E-105 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SMART SM01211 1037 1292 1.5E-155 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF55326 618 814 6.8E-66 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF52317 1034 1289 3.79E-96 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF56042 822 1031 6.73E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF56042 428 653 6.88E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1293 21.407 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 PANTHER PTHR10099 1 1293 0.0 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 PANTHER PTHR10099:SF5 1 1293 0.0 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 Gene3D G3DSA:3.40.50.880 1039 1262 3.5E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF55326 220 426 4.19E-65 T 22-04-2016 SAMA_RS12300 d6382a5313355e213e370e5423e66cba 1293 SUPERFAMILY SSF82697 1 151 7.85E-52 T 22-04-2016 SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 SUPERFAMILY SSF50475 3 176 4.25E-31 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 Pfam PF04299 Putative FMN-binding domain 6 153 2.1E-42 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 PIRSF PIRSF010372 3 195 1.1E-50 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 PANTHER PTHR35802 1 203 3.4E-45 T 22-04-2016 SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 PANTHER PTHR35802:SF1 1 203 3.4E-45 T 22-04-2016 SAMA_RS08660 73010d2faba09944bad56f6b3d9a6ef5 213 Gene3D G3DSA:2.30.110.10 6 194 3.8E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 375 3.3E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SMART SM00073 832 927 1.3E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SUPERFAMILY SSF158472 221 269 2.09E-5 T 22-04-2016 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SMART SM00387 423 540 4.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF00072 Response regulator receiver domain 695 804 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Gene3D G3DSA:3.40.50.2300 686 799 6.0E-38 T 22-04-2016 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 4.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 4.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 4.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 4.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SMART SM00448 693 806 1.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 539 3.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SUPERFAMILY SSF52172 691 814 4.27E-35 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SUPERFAMILY SSF55874 365 539 4.32E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SUPERFAMILY SSF47226 789 922 2.75E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF00672 HAMP domain 200 267 9.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SMART SM00304 219 271 3.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Gene3D G3DSA:3.30.565.10 397 593 9.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SMART SM00388 311 376 9.4E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF01627 Hpt domain 841 922 1.5E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 37 195 9.4E-52 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Gene3D G3DSA:1.10.287.130 304 372 1.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PANTHER PTHR24423 306 543 3.5E-142 T 22-04-2016 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PANTHER PTHR24423 213 266 3.5E-142 T 22-04-2016 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 PANTHER PTHR24423 640 846 3.5E-142 T 22-04-2016 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 SUPERFAMILY SSF47384 296 378 1.96E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS05375 88529fb16fa348edfc45bdd2036352b1 941 Gene3D G3DSA:1.20.120.160 800 932 1.1E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 PANTHER PTHR23083 302 391 1.0E-33 T 22-04-2016 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 PANTHER PTHR23083 14 167 1.0E-33 T 22-04-2016 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 494 587 2.3E-18 T 22-04-2016 IPR012668 Conserved hypothetical protein CHP02466 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Pfam PF07719 Tetratricopeptide repeat 104 136 2.3E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Gene3D G3DSA:2.60.120.620 414 589 1.1E-33 T 22-04-2016 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SUPERFAMILY SSF48452 281 400 1.71E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Gene3D G3DSA:1.25.40.10 4 253 1.6E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Gene3D G3DSA:1.25.40.10 257 393 6.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 Pfam PF14559 Tetratricopeptide repeat 13 77 4.0E-7 T 22-04-2016 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SUPERFAMILY SSF48452 8 160 3.75E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SMART SM00028 3 36 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SMART SM00028 305 338 180.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SMART SM00028 103 136 1.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS06565 04309cace8d4a75178011ec132404308 593 SMART SM00028 37 70 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 Gene3D G3DSA:1.10.940.10 2 132 2.5E-47 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 132 6.4E-47 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 PANTHER PTHR11078 1 133 7.8E-54 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 SUPERFAMILY SSF48013 3 131 1.57E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 133 22.198 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SAMA_RS05320 78b74635e178325c16f20dba4f17499f 134 Pfam PF01029 NusB family 7 131 2.8E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 Gene3D G3DSA:3.90.226.10 3 249 4.9E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 PANTHER PTHR11941 6 261 1.6E-110 T 22-04-2016 SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 PANTHER PTHR11941:SF65 6 261 1.6E-110 T 22-04-2016 SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 SUPERFAMILY SSF52096 3 264 1.04E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS16350 ee098832a91525e93bcf72e050c2b376 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 223 5.5E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 Pfam PF12698 ABC-2 family transporter protein 25 367 8.5E-47 T 22-04-2016 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 PRINTS PR00164 ABC-2 type transport system membrane protein signature 297 316 4.0E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 PRINTS PR00164 ABC-2 type transport system membrane protein signature 260 284 4.0E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 PRINTS PR00164 ABC-2 type transport system membrane protein signature 317 336 4.0E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 PANTHER PTHR30294:SF12 1 373 9.7E-104 T 22-04-2016 SAMA_RS18635 de5e121d63b33fb6cd69d9e90b22c6e9 375 PANTHER PTHR30294 1 373 9.7E-104 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 SUPERFAMILY SSF51621 417 713 2.88E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Gene3D G3DSA:3.30.450.40 2 159 1.0E-46 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Pfam PF00391 PEP-utilising enzyme, mobile domain 318 390 2.3E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Gene3D G3DSA:3.20.20.60 423 735 4.2E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PANTHER PTHR22931 197 715 9.4E-257 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 349 360 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Gene3D G3DSA:1.10.274.10 191 297 7.8E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 SUPERFAMILY SSF52009 291 409 1.31E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Gene3D G3DSA:3.50.30.10 298 419 4.8E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 SUPERFAMILY SSF55781 2 156 4.36E-31 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 SMART SM00065 17 162 1.4E-20 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 SUPERFAMILY SSF47831 192 307 4.18E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Pfam PF05524 PEP-utilising enzyme, N-terminal 171 292 1.5E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 706 1.7E-92 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.0E-22 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.0E-22 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 458 477 1.0E-22 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.0E-22 T 22-04-2016 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 Pfam PF13185 GAF domain 19 152 3.9E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 3.8E-135 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SAMA_RS04520 e38ff3e7fd4ae17de3174d7724ab9509 744 PANTHER PTHR22931:SF23 197 715 9.4E-257 T 22-04-2016 SAMA_RS01370 287b706e9afdfba412c4850d3b809a04 178 Pfam PF07273 Protein of unknown function (DUF1439) 22 171 9.8E-43 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 Gene3D G3DSA:1.20.1250.20 21 201 3.5E-23 T 22-04-2016 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 PANTHER PTHR23501:SF51 17 520 1.7E-261 T 22-04-2016 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 Gene3D G3DSA:1.20.1250.20 277 434 3.7E-20 T 22-04-2016 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 Gene3D G3DSA:1.20.1250.20 493 519 3.7E-20 T 22-04-2016 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 SUPERFAMILY SSF103473 16 207 4.45E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 SUPERFAMILY SSF103473 261 432 4.45E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 SUPERFAMILY SSF103473 491 517 4.45E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 512 1.6E-125 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 PANTHER PTHR23501 17 520 1.7E-261 T 22-04-2016 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 Pfam PF07690 Major Facilitator Superfamily 29 421 6.0E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS02180 38c2180ac358da08d82f74b86745064e 529 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SAMA_RS08705 86cf6987008753f10b7283b33aa938ea 600 Pfam PF08774 VRR-NUC domain 478 581 1.6E-17 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 SAMA_RS08705 86cf6987008753f10b7283b33aa938ea 600 PANTHER PTHR15749 10 593 4.1E-39 T 22-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 SAMA_RS08705 86cf6987008753f10b7283b33aa938ea 600 SMART SM00990 469 581 8.1E-33 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 Pfam PF00561 alpha/beta hydrolase fold 20 244 3.5E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 PANTHER PTHR10992:SF812 9 259 4.1E-95 T 22-04-2016 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 PANTHER PTHR10992 9 259 4.1E-95 T 22-04-2016 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 16 254 4.4E-78 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 9 258 41.899 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 SUPERFAMILY SSF53474 6 257 7.08E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18225 593068442a8f6440e13ac667f407d92e 260 Gene3D G3DSA:3.40.50.1820 8 257 2.8E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS07545 b96377b64d7e875878a59ce445f13a2e 164 SUPERFAMILY SSF54637 40 163 1.49E-22 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07545 b96377b64d7e875878a59ce445f13a2e 164 Pfam PF03061 Thioesterase superfamily 80 150 4.5E-8 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS07545 b96377b64d7e875878a59ce445f13a2e 164 PANTHER PTHR12418:SF18 22 164 1.6E-60 T 22-04-2016 SAMA_RS07545 b96377b64d7e875878a59ce445f13a2e 164 PANTHER PTHR12418 22 164 1.6E-60 T 22-04-2016 SAMA_RS07545 b96377b64d7e875878a59ce445f13a2e 164 Gene3D G3DSA:3.10.129.10 39 163 2.7E-21 T 22-04-2016 IPR029069 HotDog domain SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 377 48.564 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PANTHER PTHR11405 185 379 4.1E-254 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PANTHER PTHR11405 3 169 4.1E-254 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 SMART SM01097 3 133 1.0E-89 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00097 Anthranilate synthase component II signature 263 274 1.5E-5 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00097 Anthranilate synthase component II signature 348 361 1.5E-5 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 SUPERFAMILY SSF52021 4 148 2.22E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 SUPERFAMILY SSF52317 152 377 8.56E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 374 3.1E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 Gene3D G3DSA:3.50.30.20 3 144 1.1E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.3E-11 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 4.3E-11 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 4.3E-11 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.2E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 Gene3D G3DSA:3.40.50.880 153 377 1.0E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 Pfam PF00117 Glutamine amidotransferase class-I 196 371 3.2E-50 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 4.5E-40 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 4.5E-40 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 4.5E-40 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 4.5E-40 T 22-04-2016 SAMA_RS13070 9354e2b09f9bb6f91bd91ab34b5dc613 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 4.5E-40 T 22-04-2016 SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 Gene3D G3DSA:3.30.450.40 322 474 4.6E-13 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 Gene3D G3DSA:1.10.3150.10 7 282 5.1E-47 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 PANTHER PTHR33525:SF3 21 295 4.5E-44 T 22-04-2016 SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 SUPERFAMILY SSF55781 323 478 6.62E-13 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 PANTHER PTHR33525 21 295 4.5E-44 T 22-04-2016 SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 Pfam PF08668 HDOD domain 23 219 4.0E-27 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS12440 dc111696a606f9f3b851530b102ffd59 488 SUPERFAMILY SSF109604 10 284 9.73E-49 T 22-04-2016 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 SUPERFAMILY SSF102114 26 180 1.04E-16 T 22-04-2016 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 Gene3D G3DSA:3.20.20.70 27 179 1.9E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 Pfam PF13394 4Fe-4S single cluster domain 29 138 1.0E-5 T 22-04-2016 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 PANTHER PTHR11228 27 203 9.7E-12 T 22-04-2016 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 Pfam PF04055 Radical SAM superfamily 29 187 7.7E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS14360 f4d36a356616658e9ea6d0fb934fc218 212 TIGRFAM TIGR04038 tatD_link_rSAM: radical SAM protein, TatD family-associated 17 209 2.3E-81 T 22-04-2016 IPR023821 Radical SAM, TatD-associated SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 SUPERFAMILY SSF51395 31 479 8.37E-122 T 22-04-2016 SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 PIRSF PIRSF006429 3 520 2.3E-147 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 Gene3D G3DSA:3.20.20.70 52 479 1.2E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 PANTHER PTHR11938 157 487 1.9E-77 T 22-04-2016 SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 Pfam PF01645 Conserved region in glutamate synthase 155 473 2.5E-83 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SAMA_RS00815 c4083b37a2ee0bb26fd88a3521e3b26d 548 PANTHER PTHR11938:SF50 157 487 1.9E-77 T 22-04-2016 SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 SUPERFAMILY SSF47090 324 392 1.07E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 26 320 8.5E-112 T 22-04-2016 IPR011970 Lytic murein transglycosylase SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 SUPERFAMILY SSF53955 14 322 1.05E-100 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 Gene3D G3DSA:1.10.530.10 206 322 1.4E-59 T 22-04-2016 SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 Gene3D G3DSA:1.10.530.10 68 125 1.4E-59 T 22-04-2016 SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 Gene3D G3DSA:1.10.101.10 328 393 1.3E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 PANTHER PTHR30163:SF2 6 392 1.6E-152 T 22-04-2016 SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 PANTHER PTHR30163 6 392 1.6E-152 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 Pfam PF01471 Putative peptidoglycan binding domain 337 391 6.3E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like SAMA_RS10585 fd5ba768732ee1ee9797c2bea7bd695d 401 Pfam PF13406 Transglycosylase SLT domain 26 316 2.0E-108 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SAMA_RS09290 dadec8a62a6405ca0da37a618cfbc836 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 17 212 8.7E-50 T 22-04-2016 SAMA_RS09290 dadec8a62a6405ca0da37a618cfbc836 218 PANTHER PTHR23291 3 218 4.0E-97 T 22-04-2016 IPR006214 Bax inhibitor 1-related SAMA_RS09290 dadec8a62a6405ca0da37a618cfbc836 218 PANTHER PTHR23291:SF37 3 218 4.0E-97 T 22-04-2016 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 PANTHER PTHR30258:SF1 1 568 1.2E-270 T 22-04-2016 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 SUPERFAMILY SSF160246 4 142 7.85E-33 T 22-04-2016 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 15 144 1.9E-14 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 SUPERFAMILY SSF52540 178 566 7.06E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 PANTHER PTHR30258 1 568 1.2E-270 T 22-04-2016 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 Gene3D G3DSA:3.40.50.300 297 566 6.4E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 Gene3D G3DSA:3.30.450.90 168 291 9.2E-53 T 22-04-2016 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 10 567 4.2E-261 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 SAMA_RS02010 ea13147011e5215128ca179173b0a15d 568 Pfam PF00437 Type II/IV secretion system protein 191 458 1.9E-88 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 PANTHER PTHR11260:SF157 1 82 4.4E-14 T 22-04-2016 SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 PANTHER PTHR11260 1 82 4.4E-14 T 22-04-2016 SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 SUPERFAMILY SSF52833 1 83 5.49E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 76 3.5E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 Gene3D G3DSA:3.40.30.10 1 82 1.2E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS03510 fb508f8f2176a54a9dd0ace9e3fa17a3 200 SUPERFAMILY SSF47616 69 197 1.85E-7 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS03805 96a4e102bd2ff738dc2599b14fa03d68 495 Gene3D G3DSA:3.30.830.10 304 425 1.8E-7 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS03805 96a4e102bd2ff738dc2599b14fa03d68 495 SUPERFAMILY SSF63411 289 468 6.68E-14 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 Gene3D G3DSA:3.30.70.20 73 115 1.6E-7 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 PANTHER PTHR24960 5 157 6.7E-33 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 Gene3D G3DSA:3.30.70.20 116 162 8.4E-11 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 SUPERFAMILY SSF54862 32 159 2.51E-21 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 Pfam PF12838 4Fe-4S dicluster domain 107 154 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 Pfam PF12838 4Fe-4S dicluster domain 36 80 4.4E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 PANTHER PTHR24960:SF46 5 157 6.7E-33 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 36 47 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 Gene3D G3DSA:3.30.70.20 33 72 1.4E-12 T 22-04-2016 SAMA_RS11670 3d08cb43185f0209c136ce1e22c3ccc7 165 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 16 155 4.5E-42 T 22-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 SUPERFAMILY SSF48173 278 555 7.85E-60 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 PANTHER PTHR38657 9 237 5.2E-207 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 PANTHER PTHR38657 273 569 5.2E-207 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 Gene3D G3DSA:1.25.40.80 277 371 4.7E-7 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 Gene3D G3DSA:1.25.40.80 165 176 4.7E-7 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 Gene3D G3DSA:1.10.579.10 372 459 4.3E-4 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 21 238 6.1E-62 T 22-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 PANTHER PTHR38657:SF1 9 237 5.2E-207 T 22-04-2016 SAMA_RS13035 f437db66f1a62e835f431e19dcca1245 569 PANTHER PTHR38657:SF1 273 569 5.2E-207 T 22-04-2016 SAMA_RS05405 cdb8a53b965c221bd08075563bc2637e 105 PANTHER PTHR37485 2 105 1.5E-41 T 22-04-2016 SAMA_RS05405 cdb8a53b965c221bd08075563bc2637e 105 Pfam PF04977 Septum formation initiator 11 89 2.0E-24 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SAMA_RS05405 cdb8a53b965c221bd08075563bc2637e 105 PANTHER PTHR37485:SF1 2 105 1.5E-41 T 22-04-2016 SAMA_RS05405 cdb8a53b965c221bd08075563bc2637e 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.62 T 22-04-2016 IPR023081 Cell division protein FtsB SAMA_RS18695 f932cb8efceb6b71100c8e38eea34130 412 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 177 378 1.8E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18695 f932cb8efceb6b71100c8e38eea34130 412 SUPERFAMILY SSF58104 124 380 1.96E-57 T 22-04-2016 SAMA_RS18695 f932cb8efceb6b71100c8e38eea34130 412 SMART SM00283 118 379 6.7E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18695 f932cb8efceb6b71100c8e38eea34130 412 PANTHER PTHR32089 7 382 1.3E-70 T 22-04-2016 SAMA_RS18695 f932cb8efceb6b71100c8e38eea34130 412 Gene3D G3DSA:1.10.287.950 135 346 8.6E-49 T 22-04-2016 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 243 38.858 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 PANTHER PTHR21485 1 243 5.1E-111 T 22-04-2016 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 SUPERFAMILY SSF53448 1 242 3.38E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 PANTHER PTHR21485:SF4 1 243 5.1E-111 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 Pfam PF02348 Cytidylyltransferase 5 217 5.2E-50 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 235 4.3E-69 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SAMA_RS08565 74a9c0012d0c163959fdaa702db0219e 245 Gene3D G3DSA:3.90.550.10 1 243 2.4E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PANTHER PTHR22893 1 417 9.9E-252 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 SUPERFAMILY SSF51395 1 362 1.15E-115 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 SUPERFAMILY SSF51905 555 649 1.4E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 SUPERFAMILY SSF51905 462 520 1.4E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 Gene3D G3DSA:3.20.20.70 3 360 2.3E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 617 633 1.0E-13 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.0E-13 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 477 1.0E-13 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 1.0E-13 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 Gene3D G3DSA:3.50.50.60 473 624 2.6E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 Gene3D G3DSA:3.50.50.60 361 466 9.7E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 652 1.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PANTHER PTHR22893:SF25 1 417 9.9E-252 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 328 1.7E-80 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 SUPERFAMILY SSF51971 333 518 6.83E-38 T 22-04-2016 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 376 398 1.4E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS08990 c0c042fe7a3d5a929fb447a3329d3ecf 671 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 495 519 1.4E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 SMART SM00448 2 115 3.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 SMART SM00421 146 203 1.4E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 Gene3D G3DSA:3.40.50.2300 2 127 4.4E-37 T 22-04-2016 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 PANTHER PTHR26402:SF506 2 206 5.3E-96 T 22-04-2016 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 Pfam PF00072 Response regulator receiver domain 4 116 3.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 SUPERFAMILY SSF46894 136 210 1.84E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 PANTHER PTHR26402 2 206 5.3E-96 T 22-04-2016 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 Gene3D G3DSA:1.10.10.10 128 211 9.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 SUPERFAMILY SSF52172 3 132 1.99E-33 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS08385 14e4b40752ba81a6fadd2e9e69d354f1 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 Gene3D G3DSA:2.40.440.10 89 231 8.1E-34 T 22-04-2016 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 PANTHER PTHR30582 7 303 4.0E-127 T 22-04-2016 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 Pfam PF01476 LysM domain 40 85 4.9E-7 T 22-04-2016 IPR018392 LysM domain SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 SMART SM00257 39 85 8.6E-8 T 22-04-2016 IPR018392 LysM domain SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 Gene3D G3DSA:3.10.350.10 49 85 1.3E-6 T 22-04-2016 IPR018392 LysM domain SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 SUPERFAMILY SSF141523 91 146 3.79E-26 T 22-04-2016 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 SUPERFAMILY SSF141523 174 230 3.79E-26 T 22-04-2016 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 PANTHER PTHR30582:SF8 7 303 4.0E-127 T 22-04-2016 SAMA_RS03820 f586cb6e00b7e91012d310262ddf2d11 304 Pfam PF03734 L,D-transpeptidase catalytic domain 97 228 3.6E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82693 45 136 3.14E-16 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Gene3D G3DSA:1.10.3850.10 802 1020 3.0E-55 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82866 291 490 1.2E-36 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82714 720 796 1.44E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Gene3D G3DSA:3.30.2090.10 714 796 2.3E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 1.2E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Gene3D G3DSA:3.30.2090.10 181 267 1.4E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Pfam PF00873 AcrB/AcrD/AcrF family 8 1019 7.5E-175 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82714 182 266 8.24E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Gene3D G3DSA:3.30.70.1430 47 142 2.6E-19 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82693 268 324 2.35E-13 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82866 794 1021 1.7E-42 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PANTHER PTHR32063:SF33 5 1036 0.0 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 SUPERFAMILY SSF82693 140 181 2.35E-13 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 PANTHER PTHR32063 5 1036 0.0 T 22-04-2016 SAMA_RS14355 b4a9b6ade0aacda88b0551a6a97088fe 1067 Gene3D G3DSA:1.20.1640.10 289 498 4.3E-44 T 22-04-2016 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 PANTHER PTHR21235 1 244 2.2E-100 T 22-04-2016 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 SUPERFAMILY SSF51366 1 243 3.77E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.5E-71 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 PANTHER PTHR21235:SF15 1 244 2.2E-100 T 22-04-2016 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 Gene3D G3DSA:3.20.20.70 1 242 3.6E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 237 1.1E-71 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SAMA_RS10175 fa186e9ae2e7f3aadb9490a35e2e246c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 32.937 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 Gene3D G3DSA:3.90.470.10 1 109 1.5E-44 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 2.4E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 PANTHER PTHR13501 1 109 1.8E-55 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.6E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01150 ec5c09b4753236fe02354f57a9ad13ab 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.56 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 PANTHER PTHR11911 1 56 7.4E-24 T 22-04-2016 SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 PANTHER PTHR11911 78 131 7.4E-24 T 22-04-2016 SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 Pfam PF00571 CBS domain 3 56 1.2E-11 T 22-04-2016 IPR000644 CBS domain SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 Pfam PF00571 CBS domain 79 132 6.4E-9 T 22-04-2016 IPR000644 CBS domain SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 SUPERFAMILY SSF54631 1 133 1.26E-28 T 22-04-2016 SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 Gene3D G3DSA:3.10.580.10 1 134 8.1E-27 T 22-04-2016 SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 SMART SM00116 86 134 1.6E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS15275 42ad2a3131d06ce19d9d4caab8ed0518 139 SMART SM00116 10 59 6.1E-6 T 22-04-2016 IPR000644 CBS domain SAMA_RS16365 1c65ee30d2e41d4ea319b3f82f0097f2 141 SUPERFAMILY SSF89946 2 122 4.18E-39 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS16365 1c65ee30d2e41d4ea319b3f82f0097f2 141 PIRSF PIRSF018193 1 141 1.5E-59 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B SAMA_RS16365 1c65ee30d2e41d4ea319b3f82f0097f2 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.107 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B SAMA_RS16365 1c65ee30d2e41d4ea319b3f82f0097f2 141 Pfam PF06877 Regulator of ribonuclease activity B 11 113 5.2E-31 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS16365 1c65ee30d2e41d4ea319b3f82f0097f2 141 Gene3D G3DSA:3.30.70.970 1 124 3.7E-49 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS14410 bc020689d04749cadf9b757393a0cd04 497 PANTHER PTHR32057 30 497 3.5E-157 T 22-04-2016 SAMA_RS14410 bc020689d04749cadf9b757393a0cd04 497 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 8 466 1.5E-120 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SAMA_RS14410 bc020689d04749cadf9b757393a0cd04 497 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 6 483 43.722 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SAMA_RS01465 b8d9aadec5cdb2c909f41ab9fea36f50 783 SUPERFAMILY SSF117074 32 85 4.05E-5 T 22-04-2016 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 PANTHER PTHR21299:SF1 7 278 5.6E-131 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 Pfam PF02569 Pantoate-beta-alanine ligase 7 277 6.2E-102 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 Gene3D G3DSA:3.40.50.620 4 175 8.0E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 PANTHER PTHR21299 7 278 5.6E-131 T 22-04-2016 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 40.006 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 68 7.3E-10 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 6 278 6.6E-100 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 SUPERFAMILY SSF52374 3 279 1.23E-104 T 22-04-2016 SAMA_RS04070 ed9182bcf55fb5f1b4096a6feaec905d 281 Gene3D G3DSA:3.30.1300.10 177 279 6.3E-26 T 22-04-2016 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 390 512 3.8E-37 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 SUPERFAMILY SSF58104 67 377 4.45E-68 T 22-04-2016 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 176 374 4.8E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 SMART SM00283 114 375 4.1E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 SUPERFAMILY SSF47188 386 512 5.76E-31 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 Pfam PF01814 Hemerythrin HHE cation binding domain 401 512 3.0E-11 T 22-04-2016 IPR012312 Haemerythrin-like SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 PANTHER PTHR32089 28 378 1.6E-95 T 22-04-2016 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 ProSitePatterns PS00550 Hemerythrin family signature. 442 465 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 Gene3D G3DSA:1.10.287.950 129 347 1.1E-53 T 22-04-2016 SAMA_RS02930 cdb3b6ce5ceff0b4807b6f20aba135e7 518 Gene3D G3DSA:1.20.120.50 386 512 2.3E-35 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 Gene3D G3DSA:3.30.1300.30 33 118 7.5E-32 T 22-04-2016 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 PANTHER PTHR38779 1 121 9.9E-48 T 22-04-2016 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 101 3.0E-30 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 22 9.0E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 Pfam PF02501 Type II secretion system (T2SS), protein I 39 117 4.5E-31 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 SUPERFAMILY SSF54523 37 118 2.63E-27 T 22-04-2016 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 PANTHER PTHR38779:SF2 1 121 9.9E-48 T 22-04-2016 SAMA_RS00880 cf304d162b5eb82b88c802aeb9389556 121 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 1.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 Pfam PF00005 ABC transporter 356 503 3.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 SUPERFAMILY SSF90123 7 319 7.32E-32 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 Gene3D G3DSA:3.40.50.300 339 568 2.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 PANTHER PTHR24222:SF30 7 570 1.3E-196 T 22-04-2016 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 SUPERFAMILY SSF52540 335 570 3.07E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 1.2E-129 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 SMART SM00382 364 552 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 Pfam PF00664 ABC transporter transmembrane region 25 292 1.3E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 PANTHER PTHR24222 7 570 1.3E-196 T 22-04-2016 SAMA_RS14030 698d68c1669707a84f20c43ea0cc93cd 575 Gene3D G3DSA:1.20.1560.10 7 320 1.5E-18 T 22-04-2016 SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 PIRSF PIRSF028513 1 185 6.8E-79 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 4.1E-51 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 1.2E-44 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 PANTHER PTHR37481 1 185 2.9E-51 T 22-04-2016 SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 185 25.717 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SAMA_RS16095 94a2f4869081bdca585b40eea0692b22 185 PANTHER PTHR37481:SF1 1 185 2.9E-51 T 22-04-2016 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 Gene3D G3DSA:1.20.950.20 105 321 5.4E-59 T 22-04-2016 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 PANTHER PTHR30074 23 323 4.0E-89 T 22-04-2016 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 SUPERFAMILY SSF81342 106 321 1.8E-41 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 PANTHER PTHR30074:SF2 23 323 4.0E-89 T 22-04-2016 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 Pfam PF01292 Prokaryotic cytochrome b561 111 295 2.0E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS18740 5a30f2da4b8a3d8dd206527d1704ce07 323 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 109 314 1.6E-49 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SAMA_RS18075 2bf62c7711ad8d5f15041d0215943429 326 Gene3D G3DSA:3.90.730.10 104 302 5.1E-26 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 SAMA_RS18075 2bf62c7711ad8d5f15041d0215943429 326 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 207 218 - T 22-04-2016 IPR033130 Ribonuclease T2, His active site 2 SAMA_RS18075 2bf62c7711ad8d5f15041d0215943429 326 SUPERFAMILY SSF55895 100 317 1.14E-31 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 SAMA_RS18075 2bf62c7711ad8d5f15041d0215943429 326 Pfam PF00445 Ribonuclease T2 family 115 281 8.0E-12 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 SAMA_RS18075 2bf62c7711ad8d5f15041d0215943429 326 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 149 156 - T 22-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 Gene3D G3DSA:3.30.870.10 265 465 2.1E-35 T 22-04-2016 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 PANTHER PTHR21248:SF12 57 451 1.6E-126 T 22-04-2016 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 SUPERFAMILY SSF56024 254 462 2.15E-32 T 22-04-2016 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 PANTHER PTHR21248 57 451 1.6E-126 T 22-04-2016 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 SUPERFAMILY SSF56024 49 245 3.45E-42 T 22-04-2016 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 SMART SM00155 402 429 0.0014 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 SMART SM00155 167 194 0.036 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 Pfam PF13091 PLD-like domain 78 226 6.2E-20 T 22-04-2016 IPR025202 Phospholipase D-like domain SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 Pfam PF13091 PLD-like domain 314 453 1.6E-21 T 22-04-2016 IPR025202 Phospholipase D-like domain SAMA_RS11495 6c497e686839ba1d99ba4e9d1d51882b 508 Gene3D G3DSA:3.30.870.10 62 255 1.2E-42 T 22-04-2016 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 SUPERFAMILY SSF53756 11 376 7.07E-32 T 22-04-2016 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 Gene3D G3DSA:3.40.50.2000 162 292 2.5E-5 T 22-04-2016 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 PANTHER PTHR30372:SF0 1 379 1.9E-127 T 22-04-2016 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 375 2.7E-135 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 Pfam PF02684 Lipid-A-disaccharide synthetase 10 372 2.1E-124 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 380 40.917 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SAMA_RS06035 1660b028de374c0b34328eb99a8c8a47 393 PANTHER PTHR30372 1 379 1.9E-127 T 22-04-2016 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 Gene3D G3DSA:1.10.10.10 141 190 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 SMART SM00448 1 112 5.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 ProSitePatterns PS00622 LuxR-type HTH domain signature. 149 176 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 SUPERFAMILY SSF52172 1 159 4.54E-28 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 2.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 2.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 2.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 Gene3D G3DSA:3.40.50.2300 1 140 2.6E-26 T 22-04-2016 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 PANTHER PTHR26402:SF599 1 185 2.3E-75 T 22-04-2016 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 PANTHER PTHR26402 1 185 2.3E-75 T 22-04-2016 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 SMART SM00421 132 189 1.5E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS16585 99286d9ed934a4ebd4ec92bb5a70120b 191 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 189 3.0E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 72 94 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 298 19.257 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 Pfam PF01040 UbiA prenyltransferase family 34 279 3.6E-61 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 PANTHER PTHR11048 13 297 2.2E-80 T 22-04-2016 SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 PANTHER PTHR11048:SF3 13 297 2.2E-80 T 22-04-2016 SAMA_RS18155 1987a0ada305a529a3e7840df16e9e4e 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 297 6.4E-97 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 45 257 8.9E-74 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 Pfam PF02481 DNA recombination-mediator protein A 46 248 2.4E-74 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 Gene3D G3DSA:3.40.50.450 83 255 1.1E-9 T 22-04-2016 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 PANTHER PTHR32039 47 337 2.9E-105 T 22-04-2016 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 SUPERFAMILY SSF102405 51 257 2.59E-45 T 22-04-2016 SAMA_RS00215 edcd28476c7a094e8c317b01e7d21f65 338 PANTHER PTHR32039:SF8 47 337 2.9E-105 T 22-04-2016 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 SUPERFAMILY SSF52096 4 301 1.66E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 SUPERFAMILY SSF48179 615 706 1.53E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.245 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Gene3D G3DSA:3.90.226.10 3 202 2.3E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 4 706 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 492 6.0E-58 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Gene3D G3DSA:1.10.1040.10 496 587 1.6E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 PANTHER PTHR23309:SF6 5 706 0.0 T 22-04-2016 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 SUPERFAMILY SSF51735 309 492 1.01E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 1.1E-24 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 703 5.1E-9 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Gene3D G3DSA:1.10.1040.10 624 705 1.2E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 200 3.6E-41 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 SUPERFAMILY SSF48179 494 594 1.28E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 Gene3D G3DSA:3.40.50.720 306 495 2.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11320 4dc8a866dfd58d2925f8471ef7a05a57 706 PANTHER PTHR23309 5 706 0.0 T 22-04-2016 SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 8 532 2.6E-280 T 22-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 Gene3D G3DSA:3.40.640.10 117 387 1.2E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 PANTHER PTHR11999 52 533 4.9E-144 T 22-04-2016 SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 SUPERFAMILY SSF53383 58 533 1.64E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 67 443 1.5E-47 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 Gene3D G3DSA:3.90.1150.10 388 533 4.3E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS06285 8000df10d000cf0b6b83ce0b6f22685f 547 PANTHER PTHR11999:SF5 52 533 4.9E-144 T 22-04-2016 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 307 493 2.4E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 331 358 2.5E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.5E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 360 389 2.5E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 SMART SM00283 233 494 6.6E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 SUPERFAMILY SSF58104 186 495 8.5E-73 T 22-04-2016 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 PANTHER PTHR32089 132 495 1.8E-111 T 22-04-2016 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 Pfam PF00672 HAMP domain 147 214 1.5E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 SMART SM00304 164 218 1.6E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 PANTHER PTHR32089:SF34 132 495 1.8E-111 T 22-04-2016 SAMA_RS04915 873978947a916c91bf96a6b07d6b682e 495 Gene3D G3DSA:1.10.287.950 247 462 2.5E-53 T 22-04-2016 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 SMART SM00840 341 402 8.2E-28 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 SUPERFAMILY SSF52374 1 313 1.88E-104 T 22-04-2016 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.6E-137 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 Pfam PF09190 DALR domain 341 402 5.0E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 Gene3D G3DSA:3.40.50.620 19 305 8.2E-114 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 PANTHER PTHR10890 1 457 3.6E-255 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 8.2E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 8.2E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 8.2E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 8.2E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 5.4E-187 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 Gene3D G3DSA:1.20.120.640 306 392 1.0E-26 T 22-04-2016 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 SUPERFAMILY SSF47323 316 458 8.63E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS06390 043205eb174b2964192766d810b66a5a 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.547 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 PANTHER PTHR18895 24 207 3.2E-44 T 22-04-2016 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 Pfam PF03602 Conserved hypothetical protein 95 25 201 1.2E-57 T 22-04-2016 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 138 144 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 PIRSF PIRSF004553 24 205 1.1E-49 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 Gene3D G3DSA:3.40.50.150 21 205 8.1E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 SUPERFAMILY SSF53335 25 202 1.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 PANTHER PTHR18895:SF60 24 207 3.2E-44 T 22-04-2016 SAMA_RS18040 667e135896c670b63f0823f4fc4ec5f8 209 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 21 202 6.1E-56 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS08465 aa658f4212447786361672645d9bcc14 53 Pfam PF06796 Periplasmic nitrate reductase protein NapE 3 51 3.0E-22 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 PANTHER PTHR11654:SF99 12 217 7.9E-191 T 22-04-2016 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 PANTHER PTHR11654:SF99 261 449 7.9E-191 T 22-04-2016 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 SUPERFAMILY SSF103473 264 491 2.09E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 SUPERFAMILY SSF103473 10 211 2.09E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 478 3.9E-100 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 Gene3D G3DSA:1.20.1250.20 12 202 1.1E-17 T 22-04-2016 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 Pfam PF00854 POT family 80 451 2.4E-57 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 PANTHER PTHR11654 12 217 7.9E-191 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS06170 8d0c97f75833730966a186e69c82f76c 506 PANTHER PTHR11654 261 449 7.9E-191 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 189 39.21 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 SUPERFAMILY SSF82808 75 187 9.55E-41 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 Gene3D G3DSA:1.10.1220.10 1 38 2.2E-23 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 SUPERFAMILY SSF47598 1 35 9.78E-13 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 Gene3D G3DSA:1.20.1380.10 80 182 8.6E-35 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 PIRSF PIRSF019401 1 190 1.0E-63 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 SAMA_RS08895 704b57d826afdb969af805ce7c6da9d2 191 Pfam PF03925 SeqA protein C-terminal domain 81 182 9.7E-36 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PANTHER PTHR24322:SF427 11 139 1.4E-44 T 22-04-2016 SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PANTHER PTHR24322:SF427 155 187 1.4E-44 T 22-04-2016 SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.3E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.3E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.3E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.3E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 5.6E-50 T 22-04-2016 SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 SUPERFAMILY SSF51735 1 251 9.42E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PANTHER PTHR24322 11 139 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 PANTHER PTHR24322 155 187 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09075 86919138a9fdc799597b2be003ab03a2 272 Gene3D G3DSA:3.40.50.720 1 251 1.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 Gene3D G3DSA:3.30.420.40 197 316 1.1E-27 T 22-04-2016 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 Pfam PF11104 Type IV pilus assembly protein PilM; 15 354 3.8E-133 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 SUPERFAMILY SSF53067 13 180 1.52E-17 T 22-04-2016 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 353 3.2E-94 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 SUPERFAMILY SSF53067 194 353 2.14E-27 T 22-04-2016 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 SMART SM00842 13 180 0.001 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 Gene3D G3DSA:3.30.420.40 9 107 1.3E-15 T 22-04-2016 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 PANTHER PTHR32432:SF3 1 358 2.9E-101 T 22-04-2016 SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 PIRSF PIRSF019169 2 355 6.2E-115 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM SAMA_RS17555 d13d2452a6092cc84e89074b09678a11 359 PANTHER PTHR32432 1 358 2.9E-101 T 22-04-2016 SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 SUPERFAMILY SSF51735 3 238 2.82E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 Gene3D G3DSA:3.40.50.720 3 238 2.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PANTHER PTHR24322:SF540 151 185 8.5E-45 T 22-04-2016 SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PANTHER PTHR24322:SF540 5 128 8.5E-45 T 22-04-2016 SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 Pfam PF00106 short chain dehydrogenase 3 195 6.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PANTHER PTHR24322 151 185 8.5E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS13030 05a6e91d11c1b228ee2363d75e3bbbe9 238 PANTHER PTHR24322 5 128 8.5E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.3E-89 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 9.9E-29 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376:SF32 963 1157 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 SMART SM00663 235 514 1.5E-182 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1028 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 4.8E-28 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 380 2.7E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376:SF32 1303 1395 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 752 7.6E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1379 10.482 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.09 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Gene3D G3DSA:2.40.50.100 1156 1210 9.5E-7 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.2E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376 1303 1395 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 SUPERFAMILY SSF64484 1133 1364 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376 963 1157 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Gene3D G3DSA:2.40.40.20 349 376 6.5E-37 T 22-04-2016 SAMA_RS01095 1865281ae4ff42e97746e50b4f2a3967 1404 Gene3D G3DSA:2.40.40.20 417 489 6.5E-37 T 22-04-2016 SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 Pfam PF13098 Thioredoxin-like domain 112 234 4.8E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 PANTHER PTHR35272 1 240 7.3E-102 T 22-04-2016 SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 ProSitePatterns PS00194 Thioredoxin family active site. 119 137 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 31 82 5.3E-17 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 Gene3D G3DSA:3.40.30.10 107 238 4.1E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 Gene3D G3DSA:3.10.450.70 28 85 1.4E-20 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 SUPERFAMILY SSF54423 28 84 1.83E-15 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 SUPERFAMILY SSF52833 99 237 8.31E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14325 635add18501a1fa6c1f974820e8e3b35 242 PANTHER PTHR35272:SF3 1 240 7.3E-102 T 22-04-2016 SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 Gene3D G3DSA:3.40.50.150 1 208 1.5E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 SUPERFAMILY SSF53335 31 208 1.43E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.853 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 PANTHER PTHR10920 1 208 1.0E-138 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 PANTHER PTHR10920:SF20 1 208 1.0E-138 T 22-04-2016 SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 PIRSF PIRSF005461 1 209 2.6E-82 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SAMA_RS04980 97a07ff107ac3cbc3820b61993229041 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.1E-57 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SAMA_RS04455 180eef95fc9a25a0fd0fd2ae7cfea198 157 Pfam PF12680 SnoaL-like domain 31 141 2.7E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SAMA_RS04455 180eef95fc9a25a0fd0fd2ae7cfea198 157 SUPERFAMILY SSF54427 24 155 3.97E-18 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS04455 180eef95fc9a25a0fd0fd2ae7cfea198 157 Gene3D G3DSA:3.10.450.50 21 155 3.2E-14 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 PANTHER PTHR34137 1 79 3.0E-24 T 22-04-2016 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 14.984 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 Pfam PF02609 Exonuclease VII small subunit 10 60 9.1E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 SUPERFAMILY SSF116842 3 69 1.57E-20 T 22-04-2016 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 1.6E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 Gene3D G3DSA:1.10.287.1040 4 75 5.6E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12715 4d34a18409551e5460d7165c007cadc4 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 44 3.0E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS16070 bc055d579beba63cde6c30f0e63580c5 260 PANTHER PTHR30188 1 260 2.0E-122 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SAMA_RS16070 bc055d579beba63cde6c30f0e63580c5 260 PANTHER PTHR30188:SF4 1 260 2.0E-122 T 22-04-2016 SAMA_RS16070 bc055d579beba63cde6c30f0e63580c5 260 Pfam PF02405 Permease MlaE 46 257 3.1E-76 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SAMA_RS16070 bc055d579beba63cde6c30f0e63580c5 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 259 1.4E-95 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SAMA_RS09980 a4979d0e761d760a2c140653165dcf61 354 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 1 348 40.835 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC SAMA_RS09980 a4979d0e761d760a2c140653165dcf61 354 Pfam PF06804 NlpB/DapX lipoprotein 19 347 5.4E-106 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein SAMA_RS09980 a4979d0e761d760a2c140653165dcf61 354 PIRSF PIRSF026343 1 350 6.6E-101 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 Gene3D G3DSA:3.40.50.300 1 211 1.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 PANTHER PTHR24031:SF273 1 386 1.4E-236 T 22-04-2016 SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 SMART SM00490 255 336 4.1E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 Pfam PF00271 Helicase conserved C-terminal domain 231 336 6.3E-27 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 PANTHER PTHR24031 1 386 1.4E-236 T 22-04-2016 SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 SUPERFAMILY SSF52540 73 357 1.45E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 SMART SM00487 20 219 3.2E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS02085 1efe686086a194c2009c49c205bd12c1 394 Gene3D G3DSA:3.40.50.300 214 371 6.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 PANTHER PTHR23510:SF6 1 400 7.3E-123 T 22-04-2016 SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 Gene3D G3DSA:1.20.1250.20 210 391 2.5E-22 T 22-04-2016 SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 Gene3D G3DSA:1.20.1250.20 15 193 1.9E-33 T 22-04-2016 SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 PANTHER PTHR23510 1 400 7.3E-123 T 22-04-2016 SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 SUPERFAMILY SSF103473 11 390 1.18E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 Pfam PF07690 Major Facilitator Superfamily 19 313 3.0E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS02755 9aeee9d8c481c03454c403c62f057b50 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 SUPERFAMILY SSF88697 280 371 1.77E-22 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 SMART SM00359 281 364 3.5E-16 T 22-04-2016 IPR002478 PUA domain GO:0003723 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PIRSF PIRSF000729 4 373 6.2E-141 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 Pfam PF01472 PUA domain 281 353 2.1E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 Gene3D G3DSA:2.30.130.10 278 370 5.1E-23 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 SUPERFAMILY SSF53633 9 259 1.57E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 Gene3D G3DSA:3.40.1160.10 4 261 2.6E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 371 1.7E-146 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PANTHER PTHR11063 10 374 3.1E-131 T 22-04-2016 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 Pfam PF00696 Amino acid kinase family 10 239 1.2E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 1.7E-54 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 1.7E-54 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.7E-54 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 1.7E-54 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 1.7E-54 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SAMA_RS13130 f679b1e73cdad9d09d78d990f97ca642 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 37.01 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS06140 d5862e131d2bfe7f8174c0861110f72b 520 Pfam PF03553 Na+/H+ antiporter family 165 491 2.0E-85 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS06140 d5862e131d2bfe7f8174c0861110f72b 520 PANTHER PTHR33451:SF2 1 508 1.7E-214 T 22-04-2016 SAMA_RS06140 d5862e131d2bfe7f8174c0861110f72b 520 PANTHER PTHR33451 1 508 1.7E-214 T 22-04-2016 SAMA_RS18585 e32fab0635127f3f52fe2d18e180cc17 378 PANTHER PTHR30294:SF10 1 377 1.8E-63 T 22-04-2016 SAMA_RS18585 e32fab0635127f3f52fe2d18e180cc17 378 PANTHER PTHR30294 1 377 1.8E-63 T 22-04-2016 SAMA_RS18585 e32fab0635127f3f52fe2d18e180cc17 378 Pfam PF12679 ABC-2 family transporter protein 6 363 5.2E-21 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SAMA_RS12240 5c68a7dea5ac2e6774bf2e12bc68de36 183 Pfam PF16036 Chalcone isomerase-like 18 182 5.4E-51 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 SAMA_RS12240 5c68a7dea5ac2e6774bf2e12bc68de36 183 SUPERFAMILY SSF54626 19 183 2.48E-28 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 PANTHER PTHR30097:SF3 3 439 2.0E-156 T 22-04-2016 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 131 347 2.0E-78 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 Gene3D G3DSA:2.40.50.100 150 182 2.0E-8 T 22-04-2016 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 Gene3D G3DSA:2.40.50.100 241 274 2.0E-8 T 22-04-2016 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 SUPERFAMILY SSF111369 147 352 1.18E-15 T 22-04-2016 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 123 423 1.6E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS18065 1fd256cf1b90a95a20643a39088b5d26 439 PANTHER PTHR30097 3 439 2.0E-156 T 22-04-2016 SAMA_RS02230 96cbadb065cb319578769ff192062a29 250 SUPERFAMILY SSF111364 22 250 5.49E-69 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS02230 96cbadb065cb319578769ff192062a29 250 Gene3D G3DSA:2.40.230.20 15 250 8.8E-74 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS02230 96cbadb065cb319578769ff192062a29 250 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 27 235 1.3E-14 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 SUPERFAMILY SSF53383 12 448 2.45E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 PANTHER PTHR11986:SF81 37 456 1.8E-170 T 22-04-2016 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 Pfam PF00202 Aminotransferase class-III 36 448 1.7E-106 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 Gene3D G3DSA:3.90.1150.10 347 450 2.3E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 Gene3D G3DSA:3.90.1150.10 11 70 2.3E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 PANTHER PTHR11986 37 456 1.8E-170 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13845 9d804e90c47b65088b4d053137321fd2 460 Gene3D G3DSA:3.40.640.10 72 345 8.8E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 22-04-2016 IPR010916 TonB box, conserved site SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 SMART SM00634 46 138 3.0E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 SMART SM00634 352 458 2.6E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 Gene3D G3DSA:2.60.40.920 190 241 4.8E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 Gene3D G3DSA:2.60.40.920 47 136 8.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 Gene3D G3DSA:2.60.40.920 379 456 9.7E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 Pfam PF02369 Bacterial Ig-like domain (group 1) 378 453 2.3E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 SUPERFAMILY SSF49373 379 455 6.47E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 SUPERFAMILY SSF49373 189 242 3.92E-6 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 Gene3D G3DSA:2.60.40.920 491 544 2.2E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SAMA_RS06895 1ae3dcd301464203ef46f2429ff648cc 821 SUPERFAMILY SSF49373 47 139 4.45E-9 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SAMA_RS17355 f34969d9dabe26b8ea8a3b1d7d6ab57f 115 PIRSF PIRSF031804 1 111 2.6E-41 T 22-04-2016 IPR016983 Uncharacterised conserved protein UCP031804 SAMA_RS17355 f34969d9dabe26b8ea8a3b1d7d6ab57f 115 Pfam PF06803 Protein of unknown function (DUF1232) 46 81 1.5E-12 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 PANTHER PTHR30204 1 121 2.1E-33 T 22-04-2016 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 SMART SM00422 1 69 9.4E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 Gene3D G3DSA:1.10.1660.10 1 54 1.7E-16 T 22-04-2016 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 Gene3D G3DSA:1.10.1660.10 55 125 1.5E-12 T 22-04-2016 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 SUPERFAMILY SSF46955 1 120 1.06E-24 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 Pfam PF00376 MerR family regulatory protein 3 37 3.6E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 PANTHER PTHR30204:SF17 1 121 2.1E-33 T 22-04-2016 SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 Pfam PF09278 MerR, DNA binding 43 102 1.2E-12 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding SAMA_RS17425 07cbe7203716cebdb99cba43aa35aff0 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 42.483 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 PANTHER PTHR21235 1 259 7.3E-108 T 22-04-2016 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 SUPERFAMILY SSF51366 1 256 2.51E-70 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.4E-103 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 Pfam PF00977 Histidine biosynthesis protein 5 239 9.0E-75 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 PANTHER PTHR21235:SF2 1 259 7.3E-108 T 22-04-2016 SAMA_RS10180 faa95c2f25f164445872582e5b22ce19 259 Gene3D G3DSA:3.20.20.70 4 257 4.0E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 Gene3D G3DSA:3.90.1310.10 136 236 2.3E-29 T 22-04-2016 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 Gene3D G3DSA:3.40.710.10 237 560 1.3E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 550 6.7E-78 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 215 1.6E-20 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 PANTHER PTHR30627 2 561 9.6E-222 T 22-04-2016 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 PANTHER PTHR30627:SF1 2 561 9.6E-222 T 22-04-2016 SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 SUPERFAMILY SSF56601 230 559 1.05E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS01860 0a14629caeb6898cb2f945f578ddc8b6 578 SUPERFAMILY SSF56519 58 229 8.37E-42 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 PANTHER PTHR11472 1 688 1.2E-288 T 22-04-2016 SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Gene3D G3DSA:3.40.50.300 47 124 9.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Gene3D G3DSA:3.40.50.300 167 168 9.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Gene3D G3DSA:3.40.50.300 453 461 9.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Gene3D G3DSA:3.40.50.300 213 290 9.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Pfam PF13307 Helicase C-terminal domain 530 685 3.5E-33 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 SUPERFAMILY SSF52540 47 99 4.39E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 SUPERFAMILY SSF52540 196 272 4.39E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 SUPERFAMILY SSF52540 497 666 4.39E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 SUPERFAMILY SSF52540 451 465 4.39E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 PANTHER PTHR11472:SF32 1 688 1.2E-288 T 22-04-2016 SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 Gene3D G3DSA:3.40.50.300 510 667 8.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06545 0ffae99d1e109ba3d573abd1881312fd 691 SMART SM00491 530 672 1.3E-32 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SAMA_RS01455 d15018a83a9c5da508f638ef0002c03e 255 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 247 5.3E-48 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS01455 d15018a83a9c5da508f638ef0002c03e 255 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 4 253 15.751 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS01455 d15018a83a9c5da508f638ef0002c03e 255 PANTHER PTHR30589 1 255 2.9E-68 T 22-04-2016 SAMA_RS01455 d15018a83a9c5da508f638ef0002c03e 255 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 247 7.3E-67 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS01455 d15018a83a9c5da508f638ef0002c03e 255 PANTHER PTHR30589:SF0 1 255 2.9E-68 T 22-04-2016 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PANTHER PTHR11733:SF145 52 695 2.8E-219 T 22-04-2016 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 SUPERFAMILY SSF55486 52 695 6.01E-219 T 22-04-2016 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PANTHER PTHR11733 52 695 2.8E-219 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 Gene3D G3DSA:3.40.390.10 482 695 1.4E-115 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 Gene3D G3DSA:3.40.390.10 321 442 1.4E-115 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 Pfam PF05649 Peptidase family M13 61 439 2.5E-100 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 Pfam PF01431 Peptidase family M13 491 692 3.1E-77 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 593 604 4.1E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 513 4.1E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 522 538 4.1E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS13705 ad2ba8cb64cf578cee10b9d97ddec830 695 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 4.1E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 Gene3D G3DSA:3.40.190.10 109 201 2.9E-9 T 22-04-2016 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 PANTHER PTHR35936:SF3 8 241 1.4E-54 T 22-04-2016 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 240 6.1E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 PANTHER PTHR35936 8 241 1.4E-54 T 22-04-2016 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 SMART SM00062 25 243 5.4E-7 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 Gene3D G3DSA:3.40.190.10 53 104 2.6E-8 T 22-04-2016 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 Gene3D G3DSA:3.40.190.10 202 239 2.6E-8 T 22-04-2016 SAMA_RS05275 49044c6f471fffaf6da5a414b6f95a06 248 SUPERFAMILY SSF53850 15 242 3.62E-36 T 22-04-2016 SAMA_RS00800 1cef9658d47e729539c4aaca8dfa7194 312 PANTHER PTHR11935 150 263 7.3E-13 T 22-04-2016 SAMA_RS00800 1cef9658d47e729539c4aaca8dfa7194 312 Pfam PF00753 Metallo-beta-lactamase superfamily 152 295 2.5E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS00800 1cef9658d47e729539c4aaca8dfa7194 312 SUPERFAMILY SSF56281 95 309 8.52E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS00800 1cef9658d47e729539c4aaca8dfa7194 312 Gene3D G3DSA:3.60.15.10 99 310 1.5E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS00800 1cef9658d47e729539c4aaca8dfa7194 312 SMART SM00849 96 309 1.3E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 SUPERFAMILY SSF51246 332 443 1.62E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 8.9E-42 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Gene3D G3DSA:3.30.470.20 210 442 8.7E-83 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Gene3D G3DSA:3.30.1490.20 135 208 1.2E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Pfam PF02785 Biotin carboxylase C-terminal domain 337 442 4.3E-30 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Gene3D G3DSA:3.40.50.20 7 134 2.7E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 3.1E-68 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 PANTHER PTHR18866 6 443 2.5E-231 T 22-04-2016 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 SUPERFAMILY SSF56059 88 346 2.12E-63 T 22-04-2016 SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 SMART SM00878 337 442 8.0E-45 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SAMA_RS16650 b058bd26ae55a6e0627e86632010ab82 454 SUPERFAMILY SSF52440 5 118 1.65E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PANTHER PTHR10617 5 293 9.6E-122 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PANTHER PTHR10617 333 397 9.6E-122 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 Gene3D G3DSA:1.10.8.260 277 324 1.2E-18 T 22-04-2016 IPR023166 HI0933 insert-like domain SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 Pfam PF03486 HI0933-like protein 8 395 6.8E-151 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 Gene3D G3DSA:3.50.50.60 7 189 4.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 Gene3D G3DSA:3.50.50.60 342 397 4.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 Gene3D G3DSA:2.40.30.10 192 276 2.2E-27 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PANTHER PTHR10617:SF103 5 293 9.6E-122 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PANTHER PTHR10617:SF103 333 397 9.6E-122 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.9E-7 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.9E-7 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.9E-7 T 22-04-2016 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 SUPERFAMILY SSF51905 340 397 8.31E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 SUPERFAMILY SSF51905 6 191 8.31E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 9 394 2.0E-129 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SAMA_RS00325 a9ee98303480e09a2e60cd49f864a739 397 SUPERFAMILY SSF160996 193 341 5.89E-42 T 22-04-2016 SAMA_RS11010 c0c003e1ebff2ea78d5858c9634b9181 142 PANTHER PTHR23091:SF256 1 114 4.7E-14 T 22-04-2016 SAMA_RS11010 c0c003e1ebff2ea78d5858c9634b9181 142 Gene3D G3DSA:3.40.630.30 2 110 2.0E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS11010 c0c003e1ebff2ea78d5858c9634b9181 142 SUPERFAMILY SSF55729 1 121 9.61E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS11010 c0c003e1ebff2ea78d5858c9634b9181 142 PANTHER PTHR23091 1 114 4.7E-14 T 22-04-2016 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 PANTHER PTHR24029 1 672 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 665 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Pfam PF12344 Ultra-violet resistance protein B 553 594 9.6E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Pfam PF02151 UvrB/uvrC motif 636 668 1.1E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SUPERFAMILY SSF52540 5 416 1.78E-135 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:3.40.50.300 431 583 4.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:3.40.50.300 7 90 1.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:3.40.50.300 389 407 1.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:3.40.50.300 279 339 1.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SMART SM00487 10 427 2.6E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:3.30.2060.10 160 239 4.9E-11 T 22-04-2016 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Pfam PF00271 Helicase conserved C-terminal domain 436 546 1.8E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SUPERFAMILY SSF46600 629 669 1.83E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SMART SM00490 461 547 2.3E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Gene3D G3DSA:4.10.860.10 629 670 1.5E-17 T 22-04-2016 IPR001943 UVR domain GO:0005515 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Hamap MF_00204 UvrABC system protein B [uvrB]. 4 668 43.082 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 Pfam PF04851 Type III restriction enzyme, res subunit 17 139 8.1E-7 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SUPERFAMILY SSF52540 471 594 8.23E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09550 d93bd63ab3483fd5636ef9cac5541b18 672 SUPERFAMILY SSF52540 38 81 8.23E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SUPERFAMILY SSF56719 395 561 1.1E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SUPERFAMILY SSF56719 731 796 1.1E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SUPERFAMILY SSF55874 6 218 1.15E-74 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Gene3D G3DSA:3.40.50.670 405 551 8.1E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Gene3D G3DSA:3.40.50.670 719 787 8.1E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Pfam PF00204 DNA gyrase B 221 391 3.6E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PANTHER PTHR10169 2 554 0.0 T 22-04-2016 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PANTHER PTHR10169 723 805 0.0 T 22-04-2016 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SMART SM00433 36 798 2.0E-267 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 114 128 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 71 84 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR00418 DNA topoisomerase II family signature 36 51 4.3E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SUPERFAMILY SSF54211 221 393 3.03E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 805 104.083 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 SMART SM00387 32 176 1.9E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Gene3D G3DSA:3.30.230.10 220 393 2.3E-76 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Pfam PF01751 Toprim domain 420 532 5.3E-18 T 22-04-2016 IPR006171 Toprim domain SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 1.4E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 175 9.9E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 805 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 Gene3D G3DSA:3.30.565.10 16 218 2.5E-91 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 6 16 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS00070 223c26441f028770e0e9391f97d8adc3 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 3.0E-86 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 355 1.9E-101 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 Gene3D G3DSA:3.40.640.10 11 250 2.1E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 PANTHER PTHR30244:SF12 1 356 3.1E-98 T 22-04-2016 SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 PIRSF PIRSF000390 1 357 9.3E-92 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 SUPERFAMILY SSF53383 10 354 1.41E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 PANTHER PTHR30244 1 356 3.1E-98 T 22-04-2016 SAMA_RS11825 3639d663da4b5271acb18c32d907b23e 357 Gene3D G3DSA:3.90.1150.10 257 356 1.0E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 9.3E-51 T 22-04-2016 SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 SUPERFAMILY SSF51735 1 251 7.84E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 Gene3D G3DSA:3.40.50.720 2 250 2.3E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PANTHER PTHR24322 10 193 5.0E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.4E-4 T 22-04-2016 SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS07200 8ae83a30cb70b20b6190e92fc4350f2e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 150 170 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 Pfam PF00795 Carbon-nitrogen hydrolase 3 257 5.7E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 SUPERFAMILY SSF56317 1 265 6.15E-77 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 PANTHER PTHR23088 1 277 4.8E-103 T 22-04-2016 SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 Gene3D G3DSA:3.60.110.10 1 269 1.8E-78 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS02540 15a4b63670dfd2cd44ace61f9579a6c2 280 PANTHER PTHR23088:SF27 1 277 4.8E-103 T 22-04-2016 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 PANTHER PTHR10286 6 175 2.9E-75 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.857 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 Pfam PF00719 Inorganic pyrophosphatase 18 174 6.0E-53 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 Gene3D G3DSA:3.90.80.10 4 175 2.4E-60 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 SUPERFAMILY SSF50324 4 175 9.16E-65 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS03180 b52650eccdf5f2a32d81b4acc64ac400 177 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SAMA_RS06615 6d00a628fecfa544e6e33e122dfd15ed 180 PANTHER PTHR13256 3 175 5.7E-33 T 22-04-2016 SAMA_RS06615 6d00a628fecfa544e6e33e122dfd15ed 180 Gene3D G3DSA:3.40.630.30 4 175 3.7E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS06615 6d00a628fecfa544e6e33e122dfd15ed 180 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.2E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS06615 6d00a628fecfa544e6e33e122dfd15ed 180 SUPERFAMILY SSF55729 4 172 1.59E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 SUPERFAMILY SSF53649 9 425 1.8E-116 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 SMART SM00098 30 428 7.7E-92 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 ProSitePatterns PS00123 Alkaline phosphatase active site. 84 92 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 Pfam PF00245 Alkaline phosphatase 30 424 6.1E-90 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PANTHER PTHR11596:SF5 27 425 1.8E-127 T 22-04-2016 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 Gene3D G3DSA:3.40.720.10 10 425 1.2E-117 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PRINTS PR00113 Alkaline phosphatase signature 84 99 2.0E-38 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PRINTS PR00113 Alkaline phosphatase signature 29 49 2.0E-38 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PRINTS PR00113 Alkaline phosphatase signature 165 175 2.0E-38 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PRINTS PR00113 Alkaline phosphatase signature 227 256 2.0E-38 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PRINTS PR00113 Alkaline phosphatase signature 121 141 2.0E-38 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS03050 4d427cc52a1bef7fd73453b6ed848904 429 PANTHER PTHR11596 27 425 1.8E-127 T 22-04-2016 SAMA_RS12405 12760567a01fbac3723d604618e3d517 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 3.0E-25 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SAMA_RS12405 12760567a01fbac3723d604618e3d517 71 PANTHER PTHR40613:SF1 1 71 2.4E-30 T 22-04-2016 SAMA_RS12405 12760567a01fbac3723d604618e3d517 71 PANTHER PTHR40613 1 71 2.4E-30 T 22-04-2016 SAMA_RS12405 12760567a01fbac3723d604618e3d517 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 67 2.6E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 PANTHER PTHR30037:SF4 3 188 2.2E-109 T 22-04-2016 SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 SUPERFAMILY SSF48150 6 188 7.46E-78 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 PANTHER PTHR30037 3 188 2.2E-109 T 22-04-2016 SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 Gene3D G3DSA:1.10.340.30 6 187 3.3E-81 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 Pfam PF03352 Methyladenine glycosylase 10 185 2.7E-76 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SAMA_RS00125 a80a5e9b9093cbe7290a0e90fa3ec3f5 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 6 186 2.1E-76 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.6E-18 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 PANTHER PTHR30053 1 188 7.0E-66 T 22-04-2016 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 SMART SM01185 67 122 1.5E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 SUPERFAMILY SSF50104 1 62 3.67E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 SUPERFAMILY SSF50249 130 187 6.85E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Hamap MF_00141 Elongation factor P [efp]. 1 187 45.369 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 PIRSF PIRSF005901 1 188 1.8E-51 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.9E-18 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Gene3D G3DSA:2.40.50.140 129 187 1.5E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 8.2E-17 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Gene3D G3DSA:2.30.30.30 1 62 1.6E-19 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 187 8.3E-58 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 SMART SM00841 130 186 2.6E-20 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 Gene3D G3DSA:2.40.50.140 65 128 7.8E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS08865 bdebefa3b4f6daba45c6c937c4d8553f 188 SUPERFAMILY SSF50249 65 128 3.9E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS17880 1dc7a995e68516a729348c2e90043025 203 PANTHER PTHR19136:SF78 6 194 1.2E-12 T 22-04-2016 SAMA_RS17880 1dc7a995e68516a729348c2e90043025 203 SUPERFAMILY SSF53448 5 196 1.83E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS17880 1dc7a995e68516a729348c2e90043025 203 PANTHER PTHR19136 6 194 1.2E-12 T 22-04-2016 SAMA_RS17880 1dc7a995e68516a729348c2e90043025 203 Pfam PF12804 MobA-like NTP transferase domain 6 170 7.4E-28 T 22-04-2016 IPR025877 MobA-like NTP transferase SAMA_RS17880 1dc7a995e68516a729348c2e90043025 203 Gene3D G3DSA:3.90.550.10 5 197 8.8E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 SMART SM00893 3 180 1.3E-47 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 Gene3D G3DSA:3.40.50.620 1 179 1.2E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 251 277 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 Gene3D G3DSA:3.40.50.1220 184 305 8.2E-61 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 188 270 1.3E-36 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 SUPERFAMILY SSF52467 185 307 2.85E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 PIRSF PIRSF000089 1 307 1.4E-103 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 SUPERFAMILY SSF52402 2 179 2.93E-53 T 22-04-2016 SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 Pfam PF01012 Electron transfer flavoprotein domain 4 167 3.5E-35 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 PANTHER PTHR10909 104 305 1.6E-119 T 22-04-2016 SAMA_RS06135 d50c54d13e345d269af2494f863cb975 307 PANTHER PTHR10909:SF294 104 305 1.6E-119 T 22-04-2016 SAMA_RS00900 08b8a8861154d5fedaa24a2920077167 158 Pfam PF04612 Type II secretion system (T2SS), protein M 1 157 1.1E-53 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SAMA_RS00900 08b8a8861154d5fedaa24a2920077167 158 Gene3D G3DSA:3.30.1360.100 82 157 1.2E-28 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain SAMA_RS00900 08b8a8861154d5fedaa24a2920077167 158 SUPERFAMILY SSF103054 81 156 1.31E-23 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain SAMA_RS00900 08b8a8861154d5fedaa24a2920077167 158 PIRSF PIRSF006291 1 158 1.1E-45 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PANTHER PTHR11778:SF0 1 427 1.6E-217 T 22-04-2016 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 Gene3D G3DSA:3.30.930.10 105 425 8.4E-145 T 22-04-2016 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 SUPERFAMILY SSF46589 1 112 3.35E-30 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 426 40.954 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 SUPERFAMILY SSF55681 116 424 2.07E-103 T 22-04-2016 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 Gene3D G3DSA:1.10.287.40 1 104 3.8E-26 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 421 1.1E-176 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 404 3.5E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 1.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 1.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 1.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 1.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 1.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PIRSF PIRSF001529 1 428 6.0E-187 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 PANTHER PTHR11778 1 427 1.6E-217 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SAMA_RS09265 14b4fc37138399862b14ae07faccb7aa 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 8.1E-31 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.914 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 Pfam PF01479 S4 domain 97 143 5.8E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 PANTHER PTHR11831:SF4 1 206 1.0E-94 T 22-04-2016 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 PANTHER PTHR11831 1 206 1.0E-94 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 SMART SM00363 96 156 1.5E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 Gene3D G3DSA:1.10.1050.10 1 98 4.5E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 SMART SM01390 3 95 6.1E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 Gene3D G3DSA:3.10.290.10 99 198 6.3E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 4.5E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 SUPERFAMILY SSF55174 3 206 1.83E-74 T 22-04-2016 SAMA_RS01240 6b72d06c8458d90c2c6fa6ecf599a933 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.7E-86 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 Gene3D G3DSA:1.10.1270.20 161 244 2.8E-34 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.4E-70 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.9E-108 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 PANTHER PTHR32125:SF1 1 228 1.1E-121 T 22-04-2016 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 PIRSF PIRSF000386 1 249 8.1E-103 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 PANTHER PTHR32125 1 228 1.1E-121 T 22-04-2016 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 119.659 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 Gene3D G3DSA:3.40.1280.10 1 160 4.6E-70 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS04655 dc14ca6ab6938d288f6b68966bd3f4cc 250 SUPERFAMILY SSF75217 1 246 8.5E-104 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 SUPERFAMILY SSF52540 1 141 1.38E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 284 3.0E-101 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 PANTHER PTHR11088 1 287 4.7E-111 T 22-04-2016 SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 Pfam PF01715 IPP transferase 31 276 5.4E-85 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 293 27.499 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 Gene3D G3DSA:3.40.50.300 1 163 5.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15780 e90c226e204cb7a3b1ee6f25b20b4e92 296 Gene3D G3DSA:1.10.287.890 192 274 1.5E-31 T 22-04-2016 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 PANTHER PTHR30578 3 399 2.0E-232 T 22-04-2016 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 PANTHER PTHR30578:SF1 3 399 2.0E-232 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 PIRSF PIRSF016055 1 399 2.4E-202 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 1.4E-178 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 36.423 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 SAMA_RS13240 98223d6fa14be07a31b7f30866e99039 399 Pfam PF03116 NQR2, RnfD, RnfE family 43 392 5.5E-106 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SAMA_RS18525 0d7f264e5f325e931ba80daf2c1f5ced 291 PANTHER PTHR32322 1 271 3.4E-21 T 22-04-2016 SAMA_RS18525 0d7f264e5f325e931ba80daf2c1f5ced 291 SUPERFAMILY SSF103481 43 128 3.4E-6 T 22-04-2016 SAMA_RS18525 0d7f264e5f325e931ba80daf2c1f5ced 291 Pfam PF00892 EamA-like transporter family 3 129 1.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 Gene3D G3DSA:2.30.40.10 3 58 1.3E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 SUPERFAMILY SSF51338 1 56 1.2E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 SUPERFAMILY SSF51338 346 384 1.2E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 Gene3D G3DSA:3.20.20.140 59 332 6.1E-115 T 22-04-2016 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 PIRSF PIRSF001238 1 389 2.6E-158 T 22-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 PANTHER PTHR11647 4 162 2.3E-19 T 22-04-2016 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 Gene3D G3DSA:2.30.40.10 333 374 1.7E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 PANTHER PTHR11647:SF72 4 162 2.3E-19 T 22-04-2016 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 388 2.0E-133 T 22-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 SUPERFAMILY SSF51556 57 346 1.08E-70 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS12500 e1129cf70e3eb75cbf29d4105922ad06 390 Pfam PF01979 Amidohydrolase family 54 374 5.5E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 Gene3D G3DSA:3.30.450.20 18 134 3.7E-8 T 22-04-2016 SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 PANTHER PTHR10799 109 305 1.5E-30 T 22-04-2016 SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 Gene3D G3DSA:3.30.70.270 148 308 9.0E-51 T 22-04-2016 SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 SUPERFAMILY SSF55785 15 134 1.78E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 307 3.6E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 305 3.1E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 SMART SM00267 136 310 1.9E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 PANTHER PTHR10799:SF750 109 305 1.5E-30 T 22-04-2016 SAMA_RS18605 0958a31a39566317b69409b38aac7ef8 312 SUPERFAMILY SSF55073 152 307 1.57E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS01630 22d29ad8d8ef7b3e7ee835f69923ee9c 596 Pfam PF00474 Sodium:solute symporter family 36 461 9.5E-36 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS01630 22d29ad8d8ef7b3e7ee835f69923ee9c 596 PANTHER PTHR11819 584 593 4.5E-60 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS01630 22d29ad8d8ef7b3e7ee835f69923ee9c 596 PANTHER PTHR11819 4 548 4.5E-60 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS05525 0fb60fcfdedd29ac344bd833ee7bb35c 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.7E-171 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SAMA_RS05525 0fb60fcfdedd29ac344bd833ee7bb35c 376 PANTHER PTHR35806 1 376 3.2E-193 T 22-04-2016 SAMA_RS05525 0fb60fcfdedd29ac344bd833ee7bb35c 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.0E-160 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SAMA_RS05525 0fb60fcfdedd29ac344bd833ee7bb35c 376 PIRSF PIRSF015658 1 376 8.9E-177 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 SUPERFAMILY SSF52172 3 127 3.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 PANTHER PTHR26402 3 234 1.0E-97 T 22-04-2016 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 SMART SM00862 159 230 1.5E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 Gene3D G3DSA:3.40.50.2300 2 128 7.0E-38 T 22-04-2016 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 SUPERFAMILY SSF46894 136 231 2.32E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 SMART SM00448 3 113 2.2E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 Gene3D G3DSA:1.10.10.10 136 232 6.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 PANTHER PTHR26402:SF596 3 234 1.0E-97 T 22-04-2016 SAMA_RS05135 d58fcce9d3a297f9f8df75537f6f2171 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 230 8.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 Gene3D G3DSA:3.90.226.10 258 291 7.7E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 Gene3D G3DSA:3.90.226.10 107 209 7.7E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 SUPERFAMILY SSF52096 106 282 4.97E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 PANTHER PTHR33507:SF1 100 522 2.0E-118 T 22-04-2016 SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 Gene3D G3DSA:2.40.50.140 464 515 1.2E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 SUPERFAMILY SSF141322 458 517 7.19E-7 T 22-04-2016 SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 Pfam PF01957 NfeD-like C-terminal, partner-binding 383 517 2.8E-29 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain SAMA_RS05335 861c1d9a634dbd98ff8431629dd73b60 529 PANTHER PTHR33507 100 522 2.0E-118 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 Gene3D G3DSA:3.40.50.2300 58 166 1.6E-40 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 SUPERFAMILY SSF53822 61 330 7.85E-86 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 PANTHER PTHR30146:SF48 1 330 6.2E-118 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 PANTHER PTHR30146 1 330 6.2E-118 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 Gene3D G3DSA:3.40.50.2300 167 329 1.9E-55 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.4E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.4E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 SMART SM00354 1 71 1.0E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 6.7E-37 T 22-04-2016 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 Gene3D G3DSA:1.10.260.40 2 57 1.5E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS07295 ac439e0d052e23532154315fa1859c27 332 SUPERFAMILY SSF47413 1 60 5.49E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Pfam PF00501 AMP-binding enzyme 15 466 1.3E-95 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 SUPERFAMILY SSF56801 7 286 9.16E-117 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 SUPERFAMILY SSF56801 337 595 9.16E-117 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 PANTHER PTHR24096 1 595 2.0E-210 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 PANTHER PTHR24096:SF193 1 595 2.0E-210 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Gene3D G3DSA:3.40.50.980 191 281 1.1E-32 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Gene3D G3DSA:3.40.50.980 334 392 1.1E-32 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Gene3D G3DSA:2.30.38.10 405 460 9.0E-19 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Gene3D G3DSA:3.30.300.30 467 583 7.7E-4 T 22-04-2016 SAMA_RS18555 122a0517ffecfc2daf1789679c304de0 597 Gene3D G3DSA:3.40.50.980 8 190 2.1E-32 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 PANTHER PTHR18964:SF134 1 296 2.4E-92 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 Gene3D G3DSA:3.30.420.40 2 132 8.2E-34 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 Pfam PF00480 ROK family 4 298 1.9E-77 T 22-04-2016 IPR000600 ROK family SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 Gene3D G3DSA:3.30.420.40 133 279 6.8E-46 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 SUPERFAMILY SSF53067 1 296 1.12E-61 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 PANTHER PTHR18964 1 296 2.4E-92 T 22-04-2016 SAMA_RS11700 b04a9b1aaa5afbe0075582603068050c 299 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 Pfam PF01595 Domain of unknown function DUF21 13 180 1.2E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 SMART SM01091 340 418 1.9E-24 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 Gene3D G3DSA:3.10.580.10 191 315 1.3E-14 T 22-04-2016 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 PANTHER PTHR22777:SF3 2 416 7.9E-157 T 22-04-2016 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 Pfam PF03471 Transporter associated domain 342 415 2.4E-17 T 22-04-2016 IPR005170 Transporter-associated domain SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 SUPERFAMILY SSF54631 191 327 3.03E-26 T 22-04-2016 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 Gene3D G3DSA:3.30.465.10 316 416 4.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 PANTHER PTHR22777 2 416 7.9E-157 T 22-04-2016 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 SUPERFAMILY SSF56176 337 419 1.39E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS04630 8291b9936a549ece0ecc2ca37f095544 429 Pfam PF00571 CBS domain 277 324 5.2E-4 T 22-04-2016 IPR000644 CBS domain SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 Pfam PF00210 Ferritin-like domain 8 145 5.3E-38 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PANTHER PTHR30295:SF9 1 155 2.0E-89 T 22-04-2016 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.8E-52 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 Gene3D G3DSA:1.20.1260.10 1 155 3.4E-56 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PIRSF PIRSF002560 1 156 3.1E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PANTHER PTHR30295 1 155 2.0E-89 T 22-04-2016 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 129 150 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-50 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13195 254ea33b0c8f448b45f806e878bf8d88 156 SUPERFAMILY SSF47240 1 155 1.46E-48 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS12265 2f67e3c0d67b51e1d9ab7a166af7a32f 81 Pfam PF04325 Protein of unknown function (DUF465) 29 74 5.9E-13 T 22-04-2016 IPR007420 Protein of unknown function DUF465 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Pfam PF02559 CarD-like/TRCF domain 464 559 2.3E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Pfam PF00270 DEAD/DEAH box helicase 591 749 7.0E-21 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SMART SM01058 463 560 2.2E-48 T 22-04-2016 IPR003711 CarD-like/TRCF domain SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF141259 454 532 1.57E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF52540 766 974 2.13E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SMART SM00490 810 894 2.0E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF143517 979 1131 1.02E-42 T 22-04-2016 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 11 1125 28.769 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SMART SM00487 584 774 6.8E-34 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 PANTHER PTHR14025:SF21 365 1131 0.0 T 22-04-2016 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF52540 9 328 1.59E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 PANTHER PTHR14025 365 1131 0.0 T 22-04-2016 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SMART SM00982 992 1092 1.4E-45 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Gene3D G3DSA:3.40.50.300 573 770 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Gene3D G3DSA:3.30.2060.10 118 193 7.6E-15 T 22-04-2016 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF52540 508 767 5.34E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Pfam PF00271 Helicase conserved C-terminal domain 790 893 2.5E-16 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Pfam PF03461 TRCF domain 993 1084 1.1E-25 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 133 1065 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 Gene3D G3DSA:3.40.50.300 773 947 3.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06945 b0833f0c669d3865026e9f323d0d836c 1138 SUPERFAMILY SSF52540 336 448 1.46E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 Gene3D G3DSA:1.10.10.10 2 45 6.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 Gene3D G3DSA:1.10.10.10 46 91 1.0E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 Hamap MF_01114 Regulatory protein RecX [recX]. 1 144 11.886 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 Pfam PF02631 RecX family 22 138 9.4E-28 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 PANTHER PTHR33602:SF1 1 144 6.9E-36 T 22-04-2016 SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 Gene3D G3DSA:1.10.10.10 92 140 5.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS05455 5cfa9c60f361dca9ea45faa1023e1119 145 PANTHER PTHR33602 1 144 6.9E-36 T 22-04-2016 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 2.2E-91 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 Pfam PF01578 Cytochrome C assembly protein 89 295 1.6E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 638 2.0E-240 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PANTHER PTHR30009 1 417 0.0 T 22-04-2016 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PANTHER PTHR30009 467 653 0.0 T 22-04-2016 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 4.7E-54 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PANTHER PTHR30009:SF0 1 417 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 PANTHER PTHR30009:SF0 467 653 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01295 dc02cf1589654c9543e8237c1a745ef4 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 3.4E-122 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal SAMA_RS12150 145503947493a2661cbfcb64e55dd3e6 111 SUPERFAMILY SSF101498 23 101 5.23E-20 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SAMA_RS12150 145503947493a2661cbfcb64e55dd3e6 111 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 6.3E-18 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SAMA_RS12150 145503947493a2661cbfcb64e55dd3e6 111 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 101 2.3E-24 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SAMA_RS03260 36adf79f024cd4a862074ea2738390d2 244 PANTHER PTHR17630 21 244 1.6E-64 T 22-04-2016 SAMA_RS03260 36adf79f024cd4a862074ea2738390d2 244 PANTHER PTHR17630:SF38 21 244 1.6E-64 T 22-04-2016 SAMA_RS03260 36adf79f024cd4a862074ea2738390d2 244 Gene3D G3DSA:3.40.50.1820 8 244 8.7E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03260 36adf79f024cd4a862074ea2738390d2 244 SUPERFAMILY SSF53474 5 244 2.89E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03260 36adf79f024cd4a862074ea2738390d2 244 Pfam PF01738 Dienelactone hydrolase family 19 243 5.8E-23 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 PANTHER PTHR24220:SF508 13 197 2.4E-95 T 22-04-2016 SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 Pfam PF00005 ABC transporter 28 166 5.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 SUPERFAMILY SSF52540 11 197 2.61E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 13 211 6.9E-72 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 Gene3D G3DSA:3.40.50.300 6 197 5.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 PANTHER PTHR24220 13 197 2.4E-95 T 22-04-2016 SAMA_RS01280 86a10604b2646178feeb9e77618d1067 217 SMART SM00382 36 213 4.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 SUPERFAMILY SSF160240 212 289 1.83E-19 T 22-04-2016 SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 288 2.1E-62 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 1.6E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 Gene3D G3DSA:3.30.70.1350 209 289 1.1E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 Pfam PF01545 Cation efflux family 16 208 5.3E-37 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 PANTHER PTHR11562:SF55 1 288 3.1E-94 T 22-04-2016 SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 Gene3D G3DSA:1.20.1510.10 16 208 2.6E-39 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 PANTHER PTHR11562 1 288 3.1E-94 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SAMA_RS17845 0a65ed01714801913e9daa619e76feac 289 SUPERFAMILY SSF161111 12 209 6.41E-48 T 22-04-2016 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 SUPERFAMILY SSF46689 279 329 1.84E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 Gene3D G3DSA:1.10.10.60 280 329 2.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 PANTHER PTHR11019:SF68 94 334 8.7E-48 T 22-04-2016 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 SUPERFAMILY SSF52317 1 210 5.24E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 Gene3D G3DSA:1.10.10.60 233 279 2.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 SUPERFAMILY SSF46689 226 277 7.17E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 SMART SM00342 243 326 1.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 Gene3D G3DSA:3.40.50.880 3 232 2.8E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 Pfam PF12833 Helix-turn-helix domain 250 328 1.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 Pfam PF01965 DJ-1/PfpI family 41 150 5.5E-10 T 22-04-2016 IPR002818 DJ-1/PfpI SAMA_RS13090 fe2eeaff6e88fbe720cb05696b6d77bc 336 PANTHER PTHR11019 94 334 8.7E-48 T 22-04-2016 SAMA_RS04495 641e17b25ec30589fbecbc53b4189a25 121 SUPERFAMILY SSF47226 8 118 1.44E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS04495 641e17b25ec30589fbecbc53b4189a25 121 SMART SM00073 20 117 1.5E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS04495 641e17b25ec30589fbecbc53b4189a25 121 Pfam PF01627 Hpt domain 33 92 2.4E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS04495 641e17b25ec30589fbecbc53b4189a25 121 Gene3D G3DSA:1.20.120.160 6 118 1.1E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Pfam PF00204 DNA gyrase B 218 384 9.9E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 620 4.7E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 SUPERFAMILY SSF55874 5 215 4.16E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Gene3D G3DSA:3.30.565.10 15 213 7.0E-74 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Pfam PF01751 Toprim domain 413 512 5.2E-13 T 22-04-2016 IPR006171 Toprim domain SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 625 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 SMART SM00433 34 624 5.7E-206 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 SUPERFAMILY SSF56719 388 621 1.41E-76 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Gene3D G3DSA:3.40.50.670 398 611 8.2E-77 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Gene3D G3DSA:3.30.230.10 217 390 6.1E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 SUPERFAMILY SSF54211 218 382 5.88E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 3.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 46.358 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 SMART SM00387 27 173 2.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PANTHER PTHR10169 1 628 0.0 T 22-04-2016 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 31 46 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 414 428 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 66 79 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 266 279 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 109 123 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 517 529 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 562 578 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 479 495 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR00418 DNA topoisomerase II family signature 497 514 7.0E-56 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 584 598 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 4.7E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SAMA_RS15890 a27f8e0f186e19782202e72f527f2f6d 628 PANTHER PTHR10169:SF45 1 628 0.0 T 22-04-2016 SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 PANTHER PTHR24220:SF81 7 253 9.6E-111 T 22-04-2016 SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 PANTHER PTHR24220 7 253 9.6E-111 T 22-04-2016 SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 Pfam PF00005 ABC transporter 31 178 9.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 SMART SM00382 39 228 2.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 SUPERFAMILY SSF52540 5 249 5.54E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06455 07d52ecaeb70a5e967c5be00fb65a4a8 261 Gene3D G3DSA:3.40.50.300 2 254 1.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01920 b6f106f9564094f4016539aac64b06f4 150 Pfam PF05258 Protein of unknown function (DUF721) 21 88 8.6E-11 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 26 266 1.0E-46 T 22-04-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 PANTHER PTHR10366:SF460 24 283 5.3E-106 T 22-04-2016 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 PANTHER PTHR10366:SF460 301 345 5.3E-106 T 22-04-2016 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 SUPERFAMILY SSF51735 318 348 3.97E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 SUPERFAMILY SSF51735 24 288 3.97E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 PANTHER PTHR10366 24 283 5.3E-106 T 22-04-2016 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 PANTHER PTHR10366 301 345 5.3E-106 T 22-04-2016 SAMA_RS06210 c1ac85ebbe9621d71841b47ba7c9340a 351 Gene3D G3DSA:3.40.50.720 23 344 4.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14120 ed9c7803f2f489680cefb52e4e130c8a 274 PANTHER PTHR38776 124 274 9.2E-18 T 22-04-2016 SAMA_RS14120 ed9c7803f2f489680cefb52e4e130c8a 274 PANTHER PTHR38776 28 100 9.2E-18 T 22-04-2016 SAMA_RS14120 ed9c7803f2f489680cefb52e4e130c8a 274 Pfam PF06629 MltA-interacting protein MipA 34 271 1.8E-36 T 22-04-2016 IPR010583 MltA-interacting MipA SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 SMART SM00945 5 119 5.3E-64 T 22-04-2016 IPR016103 ProQ/FinO domain SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 Gene3D G3DSA:1.10.1710.10 3 116 1.4E-35 T 22-04-2016 IPR016103 ProQ/FinO domain SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 PANTHER PTHR38106:SF1 1 219 1.5E-78 T 22-04-2016 SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 PANTHER PTHR38106 1 219 1.5E-78 T 22-04-2016 SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 Pfam PF04352 ProQ/FINO family 9 115 3.1E-41 T 22-04-2016 IPR016103 ProQ/FinO domain SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 SUPERFAMILY SSF48657 5 117 4.71E-38 T 22-04-2016 IPR016103 ProQ/FinO domain SAMA_RS08250 70ad6952dd80fede28dd45bc2292fd2d 219 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 219 28.486 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 SMART SM00478 38 185 6.8E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 PIRSF PIRSF001435 1 210 2.4E-48 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 PANTHER PTHR10359 1 213 6.1E-92 T 22-04-2016 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Gene3D G3DSA:1.10.340.30 23 122 2.0E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.5E-85 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 4.8E-17 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 SMART SM00525 186 206 2.0E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 PANTHER PTHR10359:SF18 1 213 6.1E-92 T 22-04-2016 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.5E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 SUPERFAMILY SSF48150 3 207 2.83E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.523 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SAMA_RS09615 463f444a7348ad08bfb8e5cf0779eff8 213 Gene3D G3DSA:1.10.1670.10 123 208 7.0E-34 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 PANTHER PTHR35803:SF1 1 676 0.0 T 22-04-2016 SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 23 267 2.1E-68 T 22-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 SUPERFAMILY SSF51445 293 550 2.42E-8 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 Pfam PF10566 Glycoside hydrolase 97 272 566 1.3E-112 T 22-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 568 674 1.3E-30 T 22-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain SAMA_RS05805 3ebaa38388e85c23149cb1aca54c77aa 676 PANTHER PTHR35803 1 676 0.0 T 22-04-2016 SAMA_RS08360 af1fd79322217d44275dbcaf310abcce 625 Pfam PF11949 Protein of unknown function (DUF3466) 7 623 4.3E-218 T 22-04-2016 IPR022562 Protein of unknown function DUF3466 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 SMART SM00283 230 491 7.0E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 2.6E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 2.6E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.6E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 490 3.2E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 PANTHER PTHR32089 1 66 4.8E-88 T 22-04-2016 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 PANTHER PTHR32089 198 494 4.8E-88 T 22-04-2016 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 SUPERFAMILY SSF58104 196 491 4.05E-67 T 22-04-2016 SAMA_RS12530 245502aa40cabe0b6fe4827f984d1b2c 494 Gene3D G3DSA:1.10.287.950 245 462 1.8E-54 T 22-04-2016 SAMA_RS08785 97bd7a0be01f711860d50344623fd751 289 PANTHER PTHR30040 1 272 6.4E-60 T 22-04-2016 SAMA_RS08785 97bd7a0be01f711860d50344623fd751 289 SUPERFAMILY SSF143631 1 286 1.07E-69 T 22-04-2016 IPR003374 ApbE-like domain SAMA_RS08785 97bd7a0be01f711860d50344623fd751 289 PANTHER PTHR30040:SF2 1 272 6.4E-60 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS08785 97bd7a0be01f711860d50344623fd751 289 Pfam PF02424 ApbE family 22 279 1.3E-58 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS08785 97bd7a0be01f711860d50344623fd751 289 PIRSF PIRSF006268 1 282 1.7E-54 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 SUPERFAMILY SSF54593 3 130 7.38E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 PANTHER PTHR10374 4 131 1.3E-55 T 22-04-2016 SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 Gene3D G3DSA:3.10.180.10 3 129 1.1E-43 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 ProSitePatterns PS00934 Glyoxalase I signature 1. 6 27 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 135 2.6E-61 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 ProSitePatterns PS00935 Glyoxalase I signature 2. 71 83 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SAMA_RS09620 059f91cc1f6cf6e1a210761785586ce5 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 125 1.0E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Pfam PF00128 Alpha amylase, catalytic domain 29 378 3.7E-93 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Gene3D G3DSA:3.20.20.80 177 468 1.4E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Gene3D G3DSA:3.20.20.80 5 105 1.4E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 SUPERFAMILY SSF51445 5 466 1.12E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 SUPERFAMILY SSF51011 469 542 1.8E-10 T 22-04-2016 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 PANTHER PTHR10357:SF142 445 508 4.9E-157 T 22-04-2016 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 PANTHER PTHR10357:SF142 1 408 4.9E-157 T 22-04-2016 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Gene3D G3DSA:3.90.400.10 106 175 1.8E-30 T 22-04-2016 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Pfam PF16657 Maltogenic Amylase, C-terminal domain 469 539 1.3E-8 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 Gene3D G3DSA:2.60.40.1180 469 542 1.5E-10 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 PANTHER PTHR10357 445 508 4.9E-157 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 PANTHER PTHR10357 1 408 4.9E-157 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08680 abd76037dcd9c29b44064a045162e7de 544 SMART SM00642 14 403 5.2E-119 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 Pfam PF01061 ABC-2 type transporter 8 218 6.8E-36 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PANTHER PTHR30413 4 256 7.5E-151 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PIRSF PIRSF006648 11 253 9.1E-24 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PANTHER PTHR30413:SF2 4 256 7.5E-151 T 22-04-2016 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 4.6E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 4.6E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS04060 4f23ccf7aed37c3a28b7d16db7c825d9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 4.6E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PANTHER PTHR11739 20 428 7.6E-212 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 Gene3D G3DSA:1.10.580.10 52 280 2.3E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 Gene3D G3DSA:1.10.230.10 281 373 1.0E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 422 9.8E-238 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 359 375 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 296 316 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 165 178 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 219 234 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 241 269 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PRINTS PR00143 Citrate synthase signature 379 393 3.4E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 SUPERFAMILY SSF48256 9 428 2.36E-166 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 PIRSF PIRSF001369 38 428 5.8E-171 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SAMA_RS07405 f55a3237e98e5e9456dc4b269004f196 428 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.5E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 SMART SM00304 344 396 4.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 SMART SM00283 411 672 9.4E-71 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 Pfam PF00672 HAMP domain 325 392 2.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 PANTHER PTHR32089:SF62 1 673 1.9E-179 T 22-04-2016 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 SUPERFAMILY SSF58104 364 673 2.35E-74 T 22-04-2016 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 PANTHER PTHR32089 1 673 1.9E-179 T 22-04-2016 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 671 1.5E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS14745 56f48c7d8f275cf5bf0b0c1eb48a4cc9 673 Gene3D G3DSA:1.10.287.950 425 643 4.7E-56 T 22-04-2016 SAMA_RS04365 1930752679c2ea8404514a4f2bc9e8d1 87 PIRSF PIRSF002855 1 87 5.8E-26 T 22-04-2016 IPR016367 Murein-lipoprotein SAMA_RS04365 1930752679c2ea8404514a4f2bc9e8d1 87 SUPERFAMILY SSF58042 18 86 3.25E-16 T 22-04-2016 SAMA_RS04365 1930752679c2ea8404514a4f2bc9e8d1 87 PANTHER PTHR38763 1 87 3.8E-23 T 22-04-2016 SAMA_RS04365 1930752679c2ea8404514a4f2bc9e8d1 87 Pfam PF04728 Lipoprotein leucine-zipper 35 87 1.9E-21 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 225 4.9E-72 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 Gene3D G3DSA:3.20.20.70 3 246 7.4E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 SUPERFAMILY SSF51569 7 243 5.97E-78 T 22-04-2016 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 PIRSF PIRSF001357 5 250 6.6E-72 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 SMART SM01133 10 243 5.4E-73 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 Pfam PF01791 DeoC/LacD family aldolase 11 241 6.7E-47 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 PANTHER PTHR10889:SF3 8 254 6.9E-110 T 22-04-2016 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 257 53.72 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SAMA_RS05085 d546bdfff403ef16c7ca72fe5d881293 257 PANTHER PTHR10889 8 254 6.9E-110 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 Gene3D G3DSA:3.40.190.10 178 254 3.8E-5 T 22-04-2016 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 PANTHER PTHR30537:SF20 1 293 6.8E-164 T 22-04-2016 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 Gene3D G3DSA:1.10.10.10 5 84 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 SUPERFAMILY SSF53850 91 291 7.72E-39 T 22-04-2016 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 Pfam PF03466 LysR substrate binding domain 90 291 2.8E-39 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 SUPERFAMILY SSF46785 4 112 4.99E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 PANTHER PTHR30537 1 293 6.8E-164 T 22-04-2016 SAMA_RS12490 56c130a6cd689214ce26e530ad3b2ee4 293 Gene3D G3DSA:3.40.190.10 93 177 9.9E-26 T 22-04-2016 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.667 T 22-04-2016 IPR022973 Ribosomal protein L10 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 PANTHER PTHR11560 1 162 1.1E-58 T 22-04-2016 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 75 157 5.0E-4 T 22-04-2016 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 Pfam PF00466 Ribosomal protein L10 6 101 4.2E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SAMA_RS01080 f7c6ff666c5a6f25cbdf2c48680d4f1e 166 SUPERFAMILY SSF160369 4 161 5.49E-48 T 22-04-2016 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 SUPERFAMILY SSF100950 5 217 2.51E-73 T 22-04-2016 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 SMART SM00882 6 202 3.4E-70 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 Gene3D G3DSA:3.40.810.20 4 213 6.8E-88 T 22-04-2016 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 PANTHER PTHR13707 5 218 7.6E-113 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.5E-97 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 SAMA_RS07075 c0fbf4b141329e3110a87b061771cc9c 218 Pfam PF01144 Coenzyme A transferase 6 201 3.5E-40 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 570 2.0E-143 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 SUPERFAMILY SSF64182 45 463 2.22E-112 T 22-04-2016 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 PANTHER PTHR30255 2 571 1.8E-203 T 22-04-2016 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 Pfam PF02272 DHHA1 domain 379 447 6.0E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 PANTHER PTHR30255:SF2 2 571 1.8E-203 T 22-04-2016 SAMA_RS14320 d765503c43ed2258f053bc51a7c0b6ef 574 Pfam PF01368 DHH family 72 200 2.9E-11 T 22-04-2016 IPR001667 DDH domain SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 SMART SM00450 659 751 1.8E-5 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 PANTHER PTHR11601 1 391 2.4E-105 T 22-04-2016 SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Gene3D G3DSA:3.40.640.10 20 266 1.1E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 205 224 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 SUPERFAMILY SSF56281 421 624 6.3E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 SUPERFAMILY SSF53383 6 386 5.68E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Gene3D G3DSA:3.90.1150.10 271 379 4.7E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Gene3D G3DSA:3.60.15.10 421 595 7.1E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 PANTHER PTHR11601:SF45 1 391 2.4E-105 T 22-04-2016 SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 SUPERFAMILY SSF52821 650 749 1.83E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Gene3D G3DSA:3.40.250.10 641 748 1.3E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Pfam PF00581 Rhodanese-like domain 659 748 6.8E-6 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 SMART SM00849 421 589 5.4E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS07835 a2aec05a03d523a1d022b954f767413a 753 Pfam PF00266 Aminotransferase class-V 8 379 3.0E-57 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 SUPERFAMILY SSF52738 180 367 3.92E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 SUPERFAMILY SSF52172 2 109 1.57E-26 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 PIRSF PIRSF000876 1 370 6.9E-125 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 Pfam PF01339 CheB methylesterase 186 364 6.3E-56 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 Pfam PF00072 Response regulator receiver domain 5 109 3.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 PANTHER PTHR24421 1 365 5.4E-161 T 22-04-2016 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 Gene3D G3DSA:3.40.50.2300 1 115 4.6E-29 T 22-04-2016 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 SMART SM00448 3 126 5.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 PANTHER PTHR24421:SF16 1 365 5.4E-161 T 22-04-2016 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 Gene3D G3DSA:3.40.50.180 178 366 2.3E-70 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS11920 65f3c1906bb1ef70607e583d90067b48 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 369 38.781 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 SUPERFAMILY SSF52440 2 122 2.13E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 7.3E-139 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Gene3D G3DSA:3.30.470.20 192 300 9.8E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 PANTHER PTHR21621:SF4 1 316 6.1E-163 T 22-04-2016 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.5E-46 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.2E-78 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 181.742 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Gene3D G3DSA:3.40.50.20 2 129 2.3E-55 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 Gene3D G3DSA:3.30.1490.20 138 191 1.7E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 SUPERFAMILY SSF56059 123 312 3.77E-57 T 22-04-2016 SAMA_RS03055 6afa8626f0a4c2496b70ae6085aaf543 316 PANTHER PTHR21621 1 316 6.1E-163 T 22-04-2016 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 Gene3D G3DSA:3.40.190.10 89 169 2.3E-9 T 22-04-2016 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 SUPERFAMILY SSF53850 90 281 1.13E-25 T 22-04-2016 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 Pfam PF03466 LysR substrate binding domain 88 279 8.9E-21 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 SUPERFAMILY SSF46785 1 81 4.34E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 Gene3D G3DSA:1.10.10.10 1 82 8.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 PANTHER PTHR30126 1 278 1.3E-139 T 22-04-2016 SAMA_RS10425 1e81bb786148c74cd4a80c90ff52a0de 290 PANTHER PTHR30126:SF21 1 278 1.3E-139 T 22-04-2016 SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 7.1E-127 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 PANTHER PTHR24220 27 271 3.1E-144 T 22-04-2016 SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 Pfam PF00005 ABC transporter 43 197 1.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 SUPERFAMILY SSF52540 22 259 1.36E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 Gene3D G3DSA:3.40.50.300 24 266 2.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 SMART SM00382 50 253 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07345 0f09b58190066e4d323866e631ed9037 272 PANTHER PTHR24220:SF585 27 271 3.1E-144 T 22-04-2016 SAMA_RS13135 da6bcb71ec1b4504803d0e97cd0f1f08 429 PANTHER PTHR11119 1 418 9.6E-169 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS13135 da6bcb71ec1b4504803d0e97cd0f1f08 429 PANTHER PTHR11119:SF9 1 418 9.6E-169 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SAMA_RS13135 da6bcb71ec1b4504803d0e97cd0f1f08 429 PIRSF PIRSF005353 1 429 9.3E-178 T 22-04-2016 IPR026033 Purine permease PbuG-like SAMA_RS13135 da6bcb71ec1b4504803d0e97cd0f1f08 429 Pfam PF00860 Permease family 17 391 3.6E-51 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS02155 43da1540a9cb936b7325e9db25561149 490 PANTHER PTHR34184:SF4 284 481 2.9E-112 T 22-04-2016 SAMA_RS02155 43da1540a9cb936b7325e9db25561149 490 PANTHER PTHR34184:SF4 1 174 2.9E-112 T 22-04-2016 SAMA_RS02155 43da1540a9cb936b7325e9db25561149 490 Pfam PF03773 Predicted permease 4 435 6.5E-47 T 22-04-2016 IPR005524 Predicted permease DUF318 SAMA_RS02155 43da1540a9cb936b7325e9db25561149 490 PANTHER PTHR34184 284 481 2.9E-112 T 22-04-2016 SAMA_RS02155 43da1540a9cb936b7325e9db25561149 490 PANTHER PTHR34184 1 174 2.9E-112 T 22-04-2016 SAMA_RS00560 f7b50ffb07114c6e258cce559211a52f 500 Pfam PF14052 Capsule assembly protein Wzi 41 489 4.9E-146 T 22-04-2016 IPR026950 Capsule assembly protein Wzi SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 SUPERFAMILY SSF161098 305 481 2.45E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 PANTHER PTHR30043:SF1 30 229 3.9E-25 T 22-04-2016 SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 SUPERFAMILY SSF161098 58 236 1.24E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 Gene3D G3DSA:1.10.3720.10 54 234 2.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 Gene3D G3DSA:1.10.3720.10 240 495 8.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS08055 e15342c2e1690087be52a00b07f27eac 499 PANTHER PTHR30043 30 229 3.9E-25 T 22-04-2016 SAMA_RS14585 898a8fa22ec7c3373deb373cd9f2be14 140 SUPERFAMILY SSF51197 1 99 4.12E-23 T 22-04-2016 SAMA_RS14585 898a8fa22ec7c3373deb373cd9f2be14 140 Gene3D G3DSA:2.60.120.10 2 112 2.1E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS14585 898a8fa22ec7c3373deb373cd9f2be14 140 Pfam PF09313 Domain of unknown function (DUF1971) 13 92 2.7E-20 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 SUPERFAMILY SSF53850 60 281 2.24E-34 T 22-04-2016 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 Gene3D G3DSA:3.40.190.10 36 173 2.4E-18 T 22-04-2016 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 PANTHER PTHR21666 287 494 1.9E-123 T 22-04-2016 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 25 491 46.55 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 SUPERFAMILY SSF53955 446 460 6.67E-38 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 SUPERFAMILY SSF53955 257 411 6.67E-38 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 Pfam PF01464 Transglycosylase SLT domain 311 413 1.5E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 Gene3D G3DSA:1.10.530.10 302 473 9.9E-36 T 22-04-2016 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 281 8.3E-28 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 PANTHER PTHR21666:SF215 287 494 1.9E-123 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SAMA_RS12305 ff06ca32abc3b948a251ddaaf73d0a28 502 SMART SM00062 59 282 8.3E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS16315 a98f74641d747f095658d33d7c505144 794 PANTHER PTHR38478 1 794 1.6E-160 T 22-04-2016 SAMA_RS16315 a98f74641d747f095658d33d7c505144 794 SUPERFAMILY SSF55486 207 472 1.57E-25 T 22-04-2016 SAMA_RS16315 a98f74641d747f095658d33d7c505144 794 Pfam PF16313 Met-zincin 397 695 1.8E-64 T 22-04-2016 IPR032534 Domian of unknown function DUF4953 SAMA_RS16315 a98f74641d747f095658d33d7c505144 794 Pfam PF17148 Domain of unknown function (DUF5117) 81 270 3.4E-21 T 22-04-2016 IPR033413 Domain of unknown function DUF5117 SAMA_RS16315 a98f74641d747f095658d33d7c505144 794 Gene3D G3DSA:3.40.390.10 405 473 1.0E-8 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 SUPERFAMILY SSF51338 21 96 1.67E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 Pfam PF01979 Amidohydrolase family 72 422 3.4E-46 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 PANTHER PTHR11271 6 423 2.0E-89 T 22-04-2016 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 Gene3D G3DSA:2.30.40.10 19 77 5.4E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 Gene3D G3DSA:2.30.40.10 385 423 5.4E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 PANTHER PTHR11271:SF42 6 423 2.0E-89 T 22-04-2016 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 Gene3D G3DSA:3.20.20.140 78 381 7.6E-93 T 22-04-2016 SAMA_RS00440 b9c3eae3056272c91da0874f88d3d3ac 423 SUPERFAMILY SSF51556 76 383 1.57E-110 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 PIRSF PIRSF026649 4 307 1.2E-81 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 298 5.5E-72 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 PANTHER PTHR30606:SF4 3 307 1.4E-147 T 22-04-2016 SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 4 307 8.5E-129 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 SUPERFAMILY SSF50494 116 185 5.52E-6 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS10195 463fc55ca80642f40d6f974ac9cb303b 308 PANTHER PTHR30606 3 307 1.4E-147 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271 38 252 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271 458 481 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271 292 321 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271 349 439 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Gene3D G3DSA:2.30.40.10 28 87 1.5E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Gene3D G3DSA:2.30.40.10 434 460 1.5E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Gene3D G3DSA:2.30.40.10 405 433 5.8E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 SUPERFAMILY SSF51338 421 446 7.73E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 SUPERFAMILY SSF51338 23 86 7.73E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Pfam PF01979 Amidohydrolase family 82 438 1.9E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Gene3D G3DSA:3.20.20.140 279 404 2.0E-46 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 Gene3D G3DSA:3.20.20.140 88 241 2.0E-46 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271:SF33 38 252 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271:SF33 458 481 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271:SF33 292 321 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 PANTHER PTHR11271:SF33 349 439 4.5E-21 T 22-04-2016 SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 SUPERFAMILY SSF51556 280 422 1.67E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS13945 b033ea8ea366a9a6b010c133263a0f1f 484 SUPERFAMILY SSF51556 85 242 1.67E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 SUPERFAMILY SSF51569 7 347 3.35E-137 T 22-04-2016 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 PANTHER PTHR21225 1 351 1.2E-258 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 PANTHER PTHR21225:SF7 1 351 1.2E-258 T 22-04-2016 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 Pfam PF00793 DAHP synthetase I family 44 337 8.6E-103 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 Gene3D G3DSA:3.20.20.70 9 351 1.4E-156 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 7.7E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS03485 c757714b62f30e0e0ed244b02f64d940 352 PIRSF PIRSF001361 1 352 2.5E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 Pfam PF00578 AhpC/TSA family 38 148 3.8E-11 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 SUPERFAMILY SSF52833 14 161 1.16E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 PANTHER PTHR10681:SF106 6 153 1.9E-28 T 22-04-2016 SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 Gene3D G3DSA:3.40.30.10 25 163 1.1E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS11465 baba328d7da7f0a822c773fe4a129b5a 170 PANTHER PTHR10681 6 153 1.9E-28 T 22-04-2016 SAMA_RS12685 b6ac7283a4a495d81980e5de1191ae67 198 SUPERFAMILY SSF53474 2 176 6.49E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS12685 b6ac7283a4a495d81980e5de1191ae67 198 Gene3D G3DSA:3.40.50.1820 2 174 3.8E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS12685 b6ac7283a4a495d81980e5de1191ae67 198 PANTHER PTHR13136:SF4 4 194 1.4E-52 T 22-04-2016 SAMA_RS12685 b6ac7283a4a495d81980e5de1191ae67 198 PANTHER PTHR13136 4 194 1.4E-52 T 22-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein SAMA_RS17590 933ef41365e96b637a3c2aa4502321de 82 Gene3D G3DSA:1.10.1200.10 3 81 1.2E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS17590 933ef41365e96b637a3c2aa4502321de 82 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 14.719 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SAMA_RS17590 933ef41365e96b637a3c2aa4502321de 82 Pfam PF00550 Phosphopantetheine attachment site 10 76 5.1E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS17590 933ef41365e96b637a3c2aa4502321de 82 SUPERFAMILY SSF47336 3 80 1.96E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS02280 57d97b451a223860a7294f825d701684 192 Gene3D G3DSA:1.10.3420.10 166 189 1.2E-19 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain SAMA_RS02280 57d97b451a223860a7294f825d701684 192 Gene3D G3DSA:1.10.3420.10 12 127 1.2E-19 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain SAMA_RS02280 57d97b451a223860a7294f825d701684 192 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 91 3.3E-9 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 Gene3D G3DSA:3.30.700.10 13 148 1.6E-29 T 22-04-2016 SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 PANTHER PTHR30093 1 62 1.2E-17 T 22-04-2016 SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.1E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 Pfam PF13633 Prokaryotic N-terminal methylation site 11 36 2.9E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 SUPERFAMILY SSF54523 13 136 4.45E-21 T 22-04-2016 SAMA_RS02015 af2e75b5516a20f5c0f091aa0e7da983 157 Pfam PF00114 Pilin (bacterial filament) 42 125 4.7E-6 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 SUPERFAMILY SSF46894 134 235 7.94E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 SMART SM00862 157 233 2.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 SMART SM00448 6 117 8.0E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 PANTHER PTHR26402 6 236 1.1E-111 T 22-04-2016 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 Pfam PF00072 Response regulator receiver domain 8 118 2.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 PANTHER PTHR26402:SF292 6 236 1.1E-111 T 22-04-2016 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 Gene3D G3DSA:1.10.10.10 134 236 3.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 Gene3D G3DSA:3.40.50.2300 6 127 1.1E-42 T 22-04-2016 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.4E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS18250 1f9dfc5e8506b85e613a05ffd25f1c57 241 SUPERFAMILY SSF52172 5 128 2.85E-42 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 SUPERFAMILY SSF56524 82 335 2.22E-93 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 Gene3D G3DSA:3.90.420.10 80 335 6.3E-74 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 8 339 56.32 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 PANTHER PTHR19372:SF1 8 334 3.1E-147 T 22-04-2016 SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 Pfam PF00174 Oxidoreductase molybdopterin binding domain 112 272 7.5E-33 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SAMA_RS09910 84123d17b23d75fb14812030f8f2e2a2 339 PANTHER PTHR19372 8 334 3.1E-147 T 22-04-2016 SAMA_RS04575 236037695ff226ffc0a81ca2d09fa01c 198 PIRSF PIRSF016938 1 194 8.7E-37 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 SAMA_RS04575 236037695ff226ffc0a81ca2d09fa01c 198 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 125 179 2.5E-20 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal SAMA_RS04575 236037695ff226ffc0a81ca2d09fa01c 198 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 86 3.8E-24 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SAMA_RS04575 236037695ff226ffc0a81ca2d09fa01c 198 PANTHER PTHR38104 1 197 5.5E-55 T 22-04-2016 SAMA_RS04575 236037695ff226ffc0a81ca2d09fa01c 198 SUPERFAMILY SSF89069 6 68 5.49E-19 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SAMA_RS16910 b39eef93142262f4d0e00281a8447317 211 Pfam PF04340 Protein of unknown function, DUF484 12 210 4.9E-39 T 22-04-2016 IPR007435 Protein of unknown function DUF484 SAMA_RS16910 b39eef93142262f4d0e00281a8447317 211 PANTHER PTHR38765 1 211 8.1E-61 T 22-04-2016 SAMA_RS16205 ccdf5d05f7489b73122aa7f148af5fc1 170 Gene3D G3DSA:3.40.50.1240 25 137 7.2E-12 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS16205 ccdf5d05f7489b73122aa7f148af5fc1 170 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 29 97 8.7E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SAMA_RS16205 ccdf5d05f7489b73122aa7f148af5fc1 170 SUPERFAMILY SSF53254 29 142 5.27E-14 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 SUPERFAMILY SSF46785 5 88 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 Gene3D G3DSA:3.40.190.10 213 256 9.7E-5 T 22-04-2016 SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 Pfam PF03466 LysR substrate binding domain 89 290 6.4E-22 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 PANTHER PTHR30126 1 299 6.5E-165 T 22-04-2016 SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 SUPERFAMILY SSF53850 88 290 2.71E-25 T 22-04-2016 SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 PANTHER PTHR30126:SF18 1 299 6.5E-165 T 22-04-2016 SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 Gene3D G3DSA:1.10.10.10 5 88 4.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09295 1701f5e9efa67df09e12c655d96b8887 300 Gene3D G3DSA:3.40.190.10 89 206 5.4E-6 T 22-04-2016 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PIRSF PIRSF003161 12 345 2.1E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PANTHER PTHR30534 4 345 2.5E-116 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Pfam PF14842 FliG N-terminal domain 16 116 1.3E-27 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 SUPERFAMILY SSF48029 17 131 2.35E-20 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 SUPERFAMILY SSF48029 126 337 3.53E-69 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Gene3D G3DSA:1.10.220.30 19 86 7.6E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Gene3D G3DSA:1.10.220.30 117 202 4.7E-32 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PANTHER PTHR30534:SF0 4 345 2.5E-116 T 22-04-2016 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 46 72 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 238 258 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 126 149 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 17 33 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 284 310 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 207 232 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 PRINTS PR00954 Flagellar motor switch protein FliG signature 260 280 7.6E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Gene3D G3DSA:1.10.220.30 207 344 1.6E-43 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 13 344 5.4E-98 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Pfam PF14841 FliG middle domain 128 200 8.0E-28 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SAMA_RS12020 8ee1adf4dea8453c33c702b7d12c7d76 345 Pfam PF01706 FliG C-terminal domain 229 336 2.4E-41 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 Pfam PF08443 RimK-like ATP-grasp domain 277 454 3.2E-9 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 Gene3D G3DSA:3.30.470.20 281 458 4.7E-14 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 PANTHER PTHR11609 154 481 5.9E-125 T 22-04-2016 SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 SUPERFAMILY SSF56059 267 476 2.23E-39 T 22-04-2016 SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 PANTHER PTHR11609:SF4 154 481 5.9E-125 T 22-04-2016 SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 2.7E-43 T 22-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain SAMA_RS06060 d062dc81f83cba692fe4229366ed748f 483 Gene3D G3DSA:3.40.50.20 208 280 7.7E-10 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PANTHER PTHR40942:SF2 3 97 6.4E-56 T 22-04-2016 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PRINTS PR00607 Class IE cytochrome C signature 42 52 7.6E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PRINTS PR00607 Class IE cytochrome C signature 31 42 7.6E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PRINTS PR00607 Class IE cytochrome C signature 85 96 7.6E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PRINTS PR00607 Class IE cytochrome C signature 70 82 7.6E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 PANTHER PTHR40942 3 97 6.4E-56 T 22-04-2016 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 95 1.0E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 Gene3D G3DSA:1.10.760.10 20 96 5.6E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS01285 5de93a28db063b10c597852de94d108b 97 SUPERFAMILY SSF46626 21 96 5.91E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 SUPERFAMILY SSF53681 4 105 3.27E-30 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 PANTHER PTHR21198:SF2 2 262 5.1E-89 T 22-04-2016 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 226 4.8E-68 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 PANTHER PTHR21198 2 262 5.1E-89 T 22-04-2016 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 SUPERFAMILY SSF53681 108 223 4.8E-32 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 212 8.3E-23 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 Hamap MF_00258 Glutamate racemase [murI]. 3 253 31.812 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS00980 aa37b471798e3f25e61e52b0794d98b9 262 Gene3D G3DSA:3.40.50.1860 3 172 7.9E-46 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 Pfam PF01975 Survival protein SurE 4 182 1.6E-58 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 39.968 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 Gene3D G3DSA:3.40.1210.10 1 247 9.8E-89 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 PANTHER PTHR30457 1 245 2.6E-99 T 22-04-2016 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 SUPERFAMILY SSF64167 1 247 3.14E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SAMA_RS05425 c9308e594ccafc0cc51db9fc469ac3a8 248 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 6.0E-72 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 Pfam PF00155 Aminotransferase class I and II 153 323 4.3E-9 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 Gene3D G3DSA:1.10.10.10 14 80 6.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 SUPERFAMILY SSF46785 14 83 2.72E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 SUPERFAMILY SSF53383 98 436 3.32E-57 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 5.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 Gene3D G3DSA:3.40.640.10 133 338 3.5E-44 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 PANTHER PTHR11751:SF416 64 435 3.3E-90 T 22-04-2016 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 SMART SM00345 20 79 7.3E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SAMA_RS10520 8240a133e53ef39d72a97453d1d5749f 447 PANTHER PTHR11751 64 435 3.3E-90 T 22-04-2016 SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 9.6E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PANTHER PTHR24322:SF337 166 197 9.7E-69 T 22-04-2016 SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PANTHER PTHR24322:SF337 18 150 9.7E-69 T 22-04-2016 SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PANTHER PTHR24322 166 197 9.7E-69 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 PANTHER PTHR24322 18 150 9.7E-69 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 Gene3D G3DSA:3.40.50.720 10 243 1.9E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 Pfam PF00106 short chain dehydrogenase 14 209 9.1E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 199 0.0011 T 22-04-2016 SAMA_RS11085 4e500cd33afaec6d5577298c0b0b65c2 245 SUPERFAMILY SSF51735 10 242 6.09E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS16080 f955f769846bfc3cb9ea3889625ca347 320 Pfam PF01699 Sodium/calcium exchanger protein 173 316 4.3E-31 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SAMA_RS16080 f955f769846bfc3cb9ea3889625ca347 320 Pfam PF01699 Sodium/calcium exchanger protein 5 145 7.0E-25 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SAMA_RS16080 f955f769846bfc3cb9ea3889625ca347 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 3.5E-78 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SAMA_RS16080 f955f769846bfc3cb9ea3889625ca347 320 PANTHER PTHR10846 19 312 7.0E-59 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 PANTHER PTHR33209:SF1 1 615 1.3E-184 T 22-04-2016 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 SUPERFAMILY SSF52096 470 531 2.7E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 2.6E-185 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 SUPERFAMILY SSF52096 324 442 2.7E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 PIRSF PIRSF001217 8 617 4.2E-213 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Pfam PF01343 Peptidase family S49 139 284 2.1E-29 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Pfam PF01343 Peptidase family S49 394 543 8.3E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Gene3D G3DSA:3.90.226.10 218 314 6.3E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Gene3D G3DSA:3.90.226.10 327 434 1.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Gene3D G3DSA:3.90.226.10 35 175 6.3E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 Gene3D G3DSA:3.90.226.10 471 547 1.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 PANTHER PTHR33209 1 615 1.3E-184 T 22-04-2016 SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 SUPERFAMILY SSF52096 35 179 3.02E-25 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 SUPERFAMILY SSF52096 210 285 3.02E-25 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS08985 94e2862720f6402e4d15d9903a72b202 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 352 543 5.6E-53 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.597 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 1.3E-148 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 Gene3D G3DSA:3.90.650.10 172 343 4.3E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 SUPERFAMILY SSF56042 171 341 3.44E-62 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 SUPERFAMILY SSF55326 7 170 2.99E-51 T 22-04-2016 SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 56 164 1.6E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 PANTHER PTHR10520 7 344 4.2E-221 T 22-04-2016 SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 341 2.3E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS10965 4c112d79f7fe236427d02814657e6d60 345 Gene3D G3DSA:3.30.1330.10 22 170 2.5E-61 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS17585 88f931731728671e51c685b253333c8c 86 Pfam PF00550 Phosphopantetheine attachment site 6 60 1.3E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS17585 88f931731728671e51c685b253333c8c 86 SUPERFAMILY SSF47336 4 85 1.3E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS17585 88f931731728671e51c685b253333c8c 86 Gene3D G3DSA:1.10.1200.10 3 84 8.6E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 Gene3D G3DSA:3.40.50.300 95 349 8.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 PANTHER PTHR23264 7 366 1.7E-155 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 SUPERFAMILY SSF117916 13 96 1.8E-9 T 22-04-2016 SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 36.564 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 SUPERFAMILY SSF52540 108 350 5.33E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 105 349 1.1E-96 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SAMA_RS10680 85514b38aa8d6df22ae88008bef81e47 370 PANTHER PTHR23264:SF19 7 366 1.7E-155 T 22-04-2016 SAMA_RS07700 64619cd80028f0f0dac553358dea357b 67 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 21 67 5.0E-16 T 22-04-2016 SAMA_RS07700 64619cd80028f0f0dac553358dea357b 67 Pfam PF13617 YnbE-like lipoprotein 14 64 2.0E-26 T 22-04-2016 IPR025985 YnbE-like lipoprotein SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 SUPERFAMILY SSF56317 219 490 1.02E-40 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 23.51 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 Pfam PF00795 Carbon-nitrogen hydrolase 225 476 3.8E-35 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 Gene3D G3DSA:3.60.110.10 220 477 8.4E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 PANTHER PTHR38686 3 511 4.5E-100 T 22-04-2016 SAMA_RS13475 1028283c62be2dd1376601abca0d9930 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 457 1.4E-94 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 Gene3D G3DSA:3.40.50.300 5 167 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 234 6.7E-85 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 SUPERFAMILY SSF52540 19 214 2.96E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 PANTHER PTHR30050 6 235 5.3E-106 T 22-04-2016 SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 Gene3D G3DSA:1.10.8.60 170 235 2.3E-30 T 22-04-2016 SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 PANTHER PTHR30050:SF5 6 235 5.3E-106 T 22-04-2016 SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 134 161 2.4E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 46 66 2.4E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SAMA_RS10025 c73a6d7e00aca466315dd5ee533c656a 236 Pfam PF00308 Bacterial dnaA protein 40 215 1.2E-16 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 SUPERFAMILY SSF53756 41 822 3.3E-302 T 22-04-2016 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 PIRSF PIRSF000460 26 823 4.4E-219 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 39 821 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 PANTHER PTHR11468 41 821 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 Gene3D G3DSA:3.40.50.2000 494 808 3.2E-122 T 22-04-2016 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 Gene3D G3DSA:3.40.50.2000 38 493 7.4E-201 T 22-04-2016 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 PANTHER PTHR11468:SF3 41 821 0.0 T 22-04-2016 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 Pfam PF00343 Carbohydrate phosphorylase 114 822 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SAMA_RS12800 20ff6758b3c9b599459303120557c8fe 824 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 668 680 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 Pfam PF01235 Sodium:alanine symporter family 52 439 1.5E-137 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PANTHER PTHR30330 1 439 5.7E-215 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 88 103 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PANTHER PTHR30330:SF3 1 439 5.7E-215 T 22-04-2016 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 88 110 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 407 427 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 PRINTS PR00175 Sodium/alanine symporter signature 348 370 1.0E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS15415 23a9418b3f92ad2a6eff3d409c64940d 464 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 438 6.4E-150 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS18360 765ac46676c085a55d619f4cc2d753f1 120 PANTHER PTHR36571:SF1 30 117 1.0E-23 T 22-04-2016 SAMA_RS18360 765ac46676c085a55d619f4cc2d753f1 120 SUPERFAMILY SSF101756 19 115 1.24E-22 T 22-04-2016 IPR005220 Bacterial OB-fold SAMA_RS18360 765ac46676c085a55d619f4cc2d753f1 120 Pfam PF04076 Bacterial OB fold (BOF) protein 28 114 5.2E-17 T 22-04-2016 IPR005220 Bacterial OB-fold SAMA_RS18360 765ac46676c085a55d619f4cc2d753f1 120 Gene3D G3DSA:2.40.50.200 15 116 1.6E-25 T 22-04-2016 IPR005220 Bacterial OB-fold SAMA_RS18360 765ac46676c085a55d619f4cc2d753f1 120 PANTHER PTHR36571 30 117 1.0E-23 T 22-04-2016 SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 Pfam PF01136 Peptidase family U32 76 343 2.5E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 PANTHER PTHR30217:SF6 247 459 8.4E-232 T 22-04-2016 SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 PANTHER PTHR30217:SF6 1 206 8.4E-232 T 22-04-2016 SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 PANTHER PTHR30217 247 459 8.4E-232 T 22-04-2016 SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 PANTHER PTHR30217 1 206 8.4E-232 T 22-04-2016 SAMA_RS05240 6d1159c85c7f456cf3d1f153a07db68e 465 Pfam PF16325 Peptidase family U32 C-terminal domain 360 442 1.7E-19 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS03615 f92cad92a117da685d92a9e3da849457 403 SUPERFAMILY SSF103473 7 391 1.2E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS03615 f92cad92a117da685d92a9e3da849457 403 Pfam PF07690 Major Facilitator Superfamily 12 249 7.6E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS03615 f92cad92a117da685d92a9e3da849457 403 Gene3D G3DSA:1.20.1250.20 9 193 1.1E-9 T 22-04-2016 SAMA_RS03615 f92cad92a117da685d92a9e3da849457 403 Gene3D G3DSA:1.20.1250.20 216 394 2.9E-13 T 22-04-2016 SAMA_RS03615 f92cad92a117da685d92a9e3da849457 403 PANTHER PTHR23534 9 390 6.8E-53 T 22-04-2016 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 463 7.5E-197 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Gene3D G3DSA:1.10.1160.10 232 313 3.0E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 460 33.967 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 SUPERFAMILY SSF48163 298 460 6.02E-46 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Gene3D G3DSA:3.90.800.10 68 179 1.1E-37 T 22-04-2016 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 SUPERFAMILY SSF52374 3 297 2.23E-113 T 22-04-2016 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Gene3D G3DSA:1.10.10.350 362 460 8.4E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.0E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.0E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 2.0E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 2.0E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.0E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 1.9E-115 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Gene3D G3DSA:3.40.50.620 2 67 1.9E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 Gene3D G3DSA:3.40.50.620 180 229 1.9E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS11580 3a496e35784d8c40455fc1d6c02fb1c9 469 PANTHER PTHR11451 3 309 3.5E-105 T 22-04-2016 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 4.6E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 Gene3D G3DSA:1.10.357.10 3 190 1.0E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 PANTHER PTHR30055 1 169 4.9E-50 T 22-04-2016 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 Pfam PF13972 Bacterial transcriptional repressor 56 199 1.4E-42 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 PANTHER PTHR30055:SF30 1 169 4.9E-50 T 22-04-2016 SAMA_RS00500 5067430f6eab6c193d98427dd0f077b8 211 SUPERFAMILY SSF46689 3 62 2.33E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 11 850 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 Pfam PF11940 Domain of unknown function (DUF3458) 456 808 3.3E-112 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 SUPERFAMILY SSF55486 201 447 1.03E-75 T 22-04-2016 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 Gene3D G3DSA:1.25.50.10 535 850 1.0E-99 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 SUPERFAMILY SSF63737 4 190 2.75E-44 T 22-04-2016 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 Pfam PF01433 Peptidase family M1 111 381 9.6E-67 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PANTHER PTHR11533:SF152 9 574 0.0 T 22-04-2016 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PANTHER PTHR11533:SF152 597 850 0.0 T 22-04-2016 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PANTHER PTHR11533 9 574 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PANTHER PTHR11533 597 850 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 255 265 4.9E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 310 322 4.9E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 291 306 4.9E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 4.9E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS08260 2724cbf68b694073b63ebc8c03d30b4c 852 Gene3D G3DSA:1.10.390.10 305 448 1.8E-33 T 22-04-2016 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 Pfam PF07883 Cupin domain 109 175 9.8E-19 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 SMART SM00530 6 61 1.2E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 Gene3D G3DSA:1.10.260.40 2 64 9.5E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 Gene3D G3DSA:2.60.120.10 96 182 7.4E-21 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 SUPERFAMILY SSF51182 71 182 2.18E-27 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 SUPERFAMILY SSF47413 2 64 4.02E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 PANTHER PTHR10245 1 182 5.8E-106 T 22-04-2016 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 Pfam PF01381 Helix-turn-helix 7 60 2.6E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS13865 7e96150b9e35fb8d49ad569e06e88b10 182 PANTHER PTHR10245:SF42 1 182 5.8E-106 T 22-04-2016 SAMA_RS06160 c351d09bdfe284b6efa78e617209a749 658 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 11 496 9.6E-196 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SAMA_RS06160 c351d09bdfe284b6efa78e617209a749 658 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 49 497 2.6E-161 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SAMA_RS06160 c351d09bdfe284b6efa78e617209a749 658 PANTHER PTHR30047:SF2 1 658 3.0E-259 T 22-04-2016 SAMA_RS06160 c351d09bdfe284b6efa78e617209a749 658 PANTHER PTHR30047 1 658 3.0E-259 T 22-04-2016 SAMA_RS06160 c351d09bdfe284b6efa78e617209a749 658 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SAMA_RS18490 825ce9d32ae503489795020458096050 450 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 7.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18490 825ce9d32ae503489795020458096050 450 PRINTS PR00723 Subtilisin serine protease family (S8) signature 393 409 7.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18490 825ce9d32ae503489795020458096050 450 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 232 7.1E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18490 825ce9d32ae503489795020458096050 450 Gene3D G3DSA:3.40.50.200 92 446 2.9E-78 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS18490 825ce9d32ae503489795020458096050 450 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 223 233 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795:SF419 205 429 1.2E-61 T 22-04-2016 SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795:SF419 143 179 1.2E-61 T 22-04-2016 SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795:SF419 1 126 1.2E-61 T 22-04-2016 SAMA_RS18490 825ce9d32ae503489795020458096050 450 Pfam PF00082 Subtilase family 158 433 1.4E-44 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS18490 825ce9d32ae503489795020458096050 450 SUPERFAMILY SSF52743 97 437 1.57E-66 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS18490 825ce9d32ae503489795020458096050 450 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 394 404 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795 205 429 1.2E-61 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795 143 179 1.2E-61 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS18490 825ce9d32ae503489795020458096050 450 PANTHER PTHR10795 1 126 1.2E-61 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS14735 8419379e6dd6fca002988b1b611b1e81 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 1.1E-32 T 22-04-2016 IPR007474 ApaG domain SAMA_RS14735 8419379e6dd6fca002988b1b611b1e81 126 Gene3D G3DSA:2.60.40.1470 3 125 6.0E-46 T 22-04-2016 IPR007474 ApaG domain SAMA_RS14735 8419379e6dd6fca002988b1b611b1e81 126 PANTHER PTHR14289 8 123 5.1E-55 T 22-04-2016 SAMA_RS14735 8419379e6dd6fca002988b1b611b1e81 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.781 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG SAMA_RS14735 8419379e6dd6fca002988b1b611b1e81 126 SUPERFAMILY SSF110069 5 126 7.85E-49 T 22-04-2016 IPR007474 ApaG domain SAMA_RS08145 493d867313818baf671bf0f1c8b3ceba 167 Pfam PF13302 Acetyltransferase (GNAT) domain 37 150 3.6E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS08145 493d867313818baf671bf0f1c8b3ceba 167 Gene3D G3DSA:3.40.630.30 4 155 2.1E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS08145 493d867313818baf671bf0f1c8b3ceba 167 PANTHER PTHR13256 1 157 3.5E-15 T 22-04-2016 SAMA_RS08145 493d867313818baf671bf0f1c8b3ceba 167 PANTHER PTHR13256:SF10 1 157 3.5E-15 T 22-04-2016 SAMA_RS08145 493d867313818baf671bf0f1c8b3ceba 167 SUPERFAMILY SSF55729 26 151 3.37E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 148 160 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 28 265 1.5E-75 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 268 19.268 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 PANTHER PTHR30589 1 263 7.3E-102 T 22-04-2016 SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 PANTHER PTHR30589:SF0 1 263 7.3E-102 T 22-04-2016 SAMA_RS04530 aa2ac73fed65613ff5844c453dfaa68b 268 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 28 262 3.4E-75 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 Gene3D G3DSA:3.30.70.560 3 154 1.6E-49 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 SUPERFAMILY SSF55083 1 152 9.68E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 PANTHER PTHR20941 1 150 1.3E-60 T 22-04-2016 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 2.3E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04080 f56940bf55b224f264ec99dfa7e8ad6b 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 1.3E-39 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS11735 707a10f5045477d4c082111530873638 301 Gene3D G3DSA:3.90.25.10 217 279 1.6E-26 T 22-04-2016 SAMA_RS11735 707a10f5045477d4c082111530873638 301 SUPERFAMILY SSF51735 1 287 1.72E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11735 707a10f5045477d4c082111530873638 301 PANTHER PTHR10491:SF4 1 287 9.6E-88 T 22-04-2016 SAMA_RS11735 707a10f5045477d4c082111530873638 301 Pfam PF04321 RmlD substrate binding domain 1 288 9.5E-98 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SAMA_RS11735 707a10f5045477d4c082111530873638 301 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 288 9.8E-93 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SAMA_RS11735 707a10f5045477d4c082111530873638 301 Gene3D G3DSA:3.40.50.720 1 190 3.6E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11735 707a10f5045477d4c082111530873638 301 PANTHER PTHR10491 1 287 9.6E-88 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 SUPERFAMILY SSF51905 466 526 2.16E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 SUPERFAMILY SSF51905 30 297 2.16E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Pfam PF05199 GMC oxidoreductase 398 517 7.8E-20 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Gene3D G3DSA:3.50.50.60 460 525 8.5E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Gene3D G3DSA:3.50.50.60 32 151 8.5E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Gene3D G3DSA:3.50.50.60 400 413 8.5E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Gene3D G3DSA:3.50.50.60 196 299 8.5E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 PANTHER PTHR11552:SF92 7 518 1.2E-149 T 22-04-2016 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 Pfam PF00732 GMC oxidoreductase 35 298 5.1E-49 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SAMA_RS15640 f53c4f01d4c44a2f2cbf1ff62b8d11c4 528 PANTHER PTHR11552 7 518 1.2E-149 T 22-04-2016 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 SUPERFAMILY SSF55103 271 521 3.92E-48 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 SUPERFAMILY SSF46548 493 623 1.74E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Gene3D G3DSA:3.30.43.10 5 91 8.2E-18 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 PANTHER PTHR11748 222 564 5.4E-262 T 22-04-2016 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 PANTHER PTHR11748 2 185 5.4E-262 T 22-04-2016 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Pfam PF01565 FAD binding domain 42 179 6.7E-29 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Gene3D G3DSA:3.30.465.10 98 263 1.9E-17 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Pfam PF02754 Cysteine-rich domain 708 798 0.028 T 22-04-2016 IPR004017 Cysteine-rich domain SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Pfam PF02754 Cysteine-rich domain 834 895 0.015 T 22-04-2016 IPR004017 Cysteine-rich domain SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 542 553 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 598 609 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Pfam PF02913 FAD linked oxidases, C-terminal domain 270 516 7.7E-47 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Gene3D G3DSA:1.10.45.10 478 506 3.7E-8 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Pfam PF13183 4Fe-4S dicluster domain 540 611 7.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 PANTHER PTHR11748:SF65 222 564 5.4E-262 T 22-04-2016 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 PANTHER PTHR11748:SF65 2 185 5.4E-262 T 22-04-2016 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 SUPERFAMILY SSF56176 6 265 4.09E-50 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS12745 42a85d6fc3fa3310a3966cdc92b726d7 935 Gene3D G3DSA:1.10.1060.10 507 628 1.3E-19 T 22-04-2016 SAMA_RS14080 705cbd771df32530b7df59c25f4e82b6 188 Pfam PF08534 Redoxin 18 140 1.1E-6 T 22-04-2016 IPR013740 Redoxin GO:0016491 SAMA_RS14080 705cbd771df32530b7df59c25f4e82b6 188 SUPERFAMILY SSF52833 9 152 1.09E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14080 705cbd771df32530b7df59c25f4e82b6 188 Gene3D G3DSA:3.40.30.10 9 152 1.4E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 SUPERFAMILY SSF53474 399 656 5.54E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 124 373 8.4E-6 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 SUPERFAMILY SSF50993 37 384 7.32E-35 T 22-04-2016 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 611 2.0E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 429 447 2.0E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 513 533 2.0E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 479 2.0E-7 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 Pfam PF00326 Prolyl oligopeptidase family 450 656 4.5E-46 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 Gene3D G3DSA:3.40.50.1820 319 656 1.4E-91 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PANTHER PTHR11731 162 656 1.1E-99 T 22-04-2016 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 Gene3D G3DSA:2.120.10.60 68 311 4.0E-23 T 22-04-2016 SAMA_RS02160 e4a8325ece2b5bcd68aedb60e076144e 657 PANTHER PTHR11731:SF140 162 656 1.1E-99 T 22-04-2016 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PANTHER PTHR24322:SF635 155 187 2.9E-73 T 22-04-2016 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PANTHER PTHR24322:SF635 14 139 2.9E-73 T 22-04-2016 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 4.9E-68 T 22-04-2016 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PANTHER PTHR24322 155 187 2.9E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PANTHER PTHR24322 14 139 2.9E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 SUPERFAMILY SSF51735 9 247 4.68E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 186 0.0033 T 22-04-2016 SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 Gene3D G3DSA:3.40.50.720 5 247 3.7E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10340 fbf02a0d5219517b38f8b8d17e0bc5b3 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 1.2E-102 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 Gene3D G3DSA:1.10.10.10 4 53 3.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 PANTHER PTHR30154 2 138 2.5E-34 T 22-04-2016 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 Pfam PF01037 Lrp/AsnC ligand binding domain 69 138 3.0E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 PANTHER PTHR30154:SF12 2 138 2.5E-34 T 22-04-2016 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 SUPERFAMILY SSF46785 2 56 3.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 SUPERFAMILY SSF54909 64 138 1.5E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 Gene3D G3DSA:3.30.70.920 66 138 1.1E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 SMART SM00344 6 108 8.7E-18 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SAMA_RS08510 6a341f9d17e86bb4e49faf951b94c842 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 49 3.2E-13 T 22-04-2016 SAMA_RS08715 fe8ef7fb223dd9c8c18c1c40855dab00 121 PANTHER PTHR34535:SF3 2 115 7.8E-35 T 22-04-2016 SAMA_RS08715 fe8ef7fb223dd9c8c18c1c40855dab00 121 PANTHER PTHR34535 2 115 7.8E-35 T 22-04-2016 SAMA_RS08715 fe8ef7fb223dd9c8c18c1c40855dab00 121 PIRSF PIRSF004761 1 116 5.2E-29 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SAMA_RS08715 fe8ef7fb223dd9c8c18c1c40855dab00 121 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 2.0E-28 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.5E-191 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 SUPERFAMILY SSF51569 3 328 2.93E-105 T 22-04-2016 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 PANTHER PTHR30304 1 147 8.0E-119 T 22-04-2016 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 PANTHER PTHR30304 165 351 8.0E-119 T 22-04-2016 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 PIRSF PIRSF001359 1 329 1.0E-80 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 4.1E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 1.2E-93 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SAMA_RS14415 56748133bf6ed9b9c78b14d8d8f8e7df 355 Gene3D G3DSA:3.20.20.70 1 335 4.2E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953:SF28 347 558 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953:SF28 42 187 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953:SF28 211 315 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 Pfam PF09423 PhoD-like phosphatase 145 555 2.7E-130 T 22-04-2016 IPR018946 Alkaline phosphatase D-related SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 Gene3D G3DSA:3.60.21.10 159 367 2.7E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953 347 558 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953 42 187 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 PANTHER PTHR22953 211 315 4.1E-115 T 22-04-2016 SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 46 134 3.4E-32 T 22-04-2016 IPR032093 Phospholipase D, N-terminal SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 SUPERFAMILY SSF56300 443 559 1.23E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 SUPERFAMILY SSF56300 349 377 1.23E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS15270 9468a157574725976be6dd50bc94f768 589 SUPERFAMILY SSF56300 141 315 1.23E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 PANTHER PTHR10000:SF7 91 316 1.6E-89 T 22-04-2016 SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 104 310 9.3E-78 T 22-04-2016 SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 SUPERFAMILY SSF56784 109 314 4.69E-45 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 111 282 7.9E-25 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 PANTHER PTHR10000 91 316 1.6E-89 T 22-04-2016 SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 Gene3D G3DSA:1.10.150.210 121 172 1.2E-26 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 Gene3D G3DSA:3.40.50.1000 173 307 9.3E-34 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS05110 a5ae35ca73bdc8962967a2d5be437834 316 Pfam PF12710 haloacid dehalogenase-like hydrolase 144 279 2.5E-14 T 22-04-2016 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 1.5E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 1.5E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.5E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 Pfam PF01590 GAF domain 17 148 3.8E-5 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PANTHER PTHR24423:SF445 155 225 1.6E-32 T 22-04-2016 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PANTHER PTHR24423:SF445 246 410 1.6E-32 T 22-04-2016 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 Gene3D G3DSA:1.10.287.130 193 249 6.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 SUPERFAMILY SSF55781 15 161 4.42E-15 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 430 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 SUPERFAMILY SSF55874 272 418 1.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 SMART SM00065 13 158 1.3E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PANTHER PTHR24423 155 225 1.6E-32 T 22-04-2016 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 PANTHER PTHR24423 246 410 1.6E-32 T 22-04-2016 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 SUPERFAMILY SSF47384 181 249 1.79E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 Gene3D G3DSA:3.30.450.40 11 164 1.1E-7 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 SMART SM00387 323 433 2.6E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10850 63a756a9e4eb7e5c04dff812f2f01a76 433 Gene3D G3DSA:3.30.565.10 285 419 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 SUPERFAMILY SSF47240 3 340 9.36E-111 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 PANTHER PTHR23409:SF23 197 376 7.2E-265 T 22-04-2016 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 PANTHER PTHR23409:SF23 1 173 7.2E-265 T 22-04-2016 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 Gene3D G3DSA:1.10.620.20 3 340 1.0E-123 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 9.0E-47 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 PANTHER PTHR23409 197 376 7.2E-265 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SAMA_RS09005 d1d5f99473e86b550c354868d8b22b5c 376 PANTHER PTHR23409 1 173 7.2E-265 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 20 141 2.6E-39 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 PIRSF PIRSF006105 1 143 1.2E-37 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 PANTHER PTHR38604 1 142 4.2E-52 T 22-04-2016 SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 Gene3D G3DSA:4.10.1020.10 65 126 2.9E-23 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 SUPERFAMILY SSF48695 32 141 5.93E-32 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS15580 dcb25cdf8d4862e0cf8204371dea5b44 143 PANTHER PTHR38604:SF1 1 142 4.2E-52 T 22-04-2016 SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 PANTHER PTHR24220:SF309 6 249 4.3E-89 T 22-04-2016 SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 PANTHER PTHR24220 6 249 4.3E-89 T 22-04-2016 SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 SMART SM00382 29 214 6.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 Gene3D G3DSA:3.40.50.300 2 231 5.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 Pfam PF00005 ABC transporter 20 169 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS03995 61888f729c1e01b465bd71db8702b16a 271 SUPERFAMILY SSF52540 3 227 6.12E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17140 b3f8e2e18290853592b1b80ca50e0e2d 306 Pfam PF01553 Acyltransferase 73 227 3.2E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17140 b3f8e2e18290853592b1b80ca50e0e2d 306 SUPERFAMILY SSF69593 55 281 2.22E-29 T 22-04-2016 SAMA_RS17140 b3f8e2e18290853592b1b80ca50e0e2d 306 SMART SM00563 87 229 2.2E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS17140 b3f8e2e18290853592b1b80ca50e0e2d 306 PANTHER PTHR10983:SF15 1 303 6.6E-131 T 22-04-2016 SAMA_RS17140 b3f8e2e18290853592b1b80ca50e0e2d 306 PANTHER PTHR10983 1 303 6.6E-131 T 22-04-2016 SAMA_RS03720 465282e083c82ea651b58e0ac76b6648 298 SMART SM00858 50 114 8.0E-7 T 22-04-2016 IPR013974 SAF domain SAMA_RS03720 465282e083c82ea651b58e0ac76b6648 298 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 251 1.6E-38 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB SAMA_RS03720 465282e083c82ea651b58e0ac76b6648 298 Pfam PF08666 SAF domain 51 110 2.8E-6 T 22-04-2016 IPR013974 SAF domain SAMA_RS03720 465282e083c82ea651b58e0ac76b6648 298 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 120 233 1.2E-23 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain SAMA_RS18165 1567c396c53bcd841650aa1757c22583 93 Pfam PF13466 STAS domain 6 85 2.9E-16 T 22-04-2016 IPR002645 STAS domain SAMA_RS18165 1567c396c53bcd841650aa1757c22583 93 SUPERFAMILY SSF52091 5 85 2.35E-9 T 22-04-2016 IPR002645 STAS domain SAMA_RS18165 1567c396c53bcd841650aa1757c22583 93 Gene3D G3DSA:3.30.750.24 6 84 5.1E-5 T 22-04-2016 IPR002645 STAS domain SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 6.4E-170 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 83 103 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 62 77 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 163 178 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 114 138 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 140 160 1.1E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 Gene3D G3DSA:1.20.58.180 216 299 3.2E-37 T 22-04-2016 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 10 293 3.0E-151 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 SUPERFAMILY SSF55681 9 293 6.75E-136 T 22-04-2016 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 PANTHER PTHR30075 1 301 2.8E-273 T 22-04-2016 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 8 294 61.915 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SAMA_RS00120 78e21d02042d34c1def8e66fc25158cd 301 Gene3D G3DSA:3.30.930.10 4 215 3.6E-107 T 22-04-2016 SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 PANTHER PTHR30128 16 193 1.8E-37 T 22-04-2016 SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 Gene3D G3DSA:3.30.1330.60 68 181 4.5E-35 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 Pfam PF00691 OmpA family 79 174 1.2E-22 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 SUPERFAMILY SSF103088 55 178 1.57E-33 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 PRINTS PR01021 OMPA domain signature 79 101 6.3E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 PRINTS PR01021 OMPA domain signature 124 140 6.3E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS16980 64ae93f59dd4c1970f14e996ae8029ff 201 PRINTS PR01021 OMPA domain signature 109 124 6.3E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Pfam PF01565 FAD binding domain 51 190 5.7E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 SUPERFAMILY SSF55103 259 537 3.92E-52 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 PANTHER PTHR11748 247 584 1.1E-168 T 22-04-2016 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 PANTHER PTHR11748 17 195 1.1E-168 T 22-04-2016 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Gene3D G3DSA:3.30.465.10 109 280 1.4E-41 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Pfam PF02913 FAD linked oxidases, C-terminal domain 280 536 5.7E-54 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Pfam PF13183 4Fe-4S dicluster domain 572 677 3.1E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 SUPERFAMILY SSF46548 512 681 3.49E-11 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 PANTHER PTHR11748:SF35 247 584 1.1E-168 T 22-04-2016 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 PANTHER PTHR11748:SF35 17 195 1.1E-168 T 22-04-2016 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 663 674 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Gene3D G3DSA:3.30.43.10 3 108 3.0E-23 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 SUPERFAMILY SSF56176 14 191 4.36E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 SUPERFAMILY SSF56176 238 280 4.36E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SAMA_RS10795 97a14d4d914ae9c73a69595449db193e 1007 Gene3D G3DSA:1.10.1060.10 513 695 9.4E-18 T 22-04-2016 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 PANTHER PTHR23416 2 248 2.7E-133 T 22-04-2016 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Gene3D G3DSA:2.160.10.10 2 186 4.1E-51 T 22-04-2016 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 2.2E-29 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 5.2E-105 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.53 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 PANTHER PTHR23416:SF8 2 248 2.7E-133 T 22-04-2016 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Gene3D G3DSA:1.20.1180.10 191 256 1.1E-25 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 PIRSF PIRSF000456 1 256 3.1E-106 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 60 93 4.2E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 2.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 5.6E-12 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06030 0a2db9258f7004ae71cc27212eea3ab1 256 SUPERFAMILY SSF51161 2 256 1.51E-83 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 PANTHER PTHR36112 9 248 2.6E-137 T 22-04-2016 SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 245 39.335 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 Pfam PF04445 Putative SAM-dependent methyltransferase 16 244 8.3E-109 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 PANTHER PTHR36112:SF1 9 248 2.6E-137 T 22-04-2016 SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 Gene3D G3DSA:3.40.1630.10 9 53 1.9E-16 T 22-04-2016 SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 SUPERFAMILY SSF53335 11 244 2.39E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18520 b692287449f739ed67f7c8ce2b3dbdaa 248 Gene3D G3DSA:3.40.50.150 54 245 2.2E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 SUPERFAMILY SSF52833 5 116 3.73E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 PANTHER PTHR30041 1 116 1.2E-53 T 22-04-2016 SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 2.1E-44 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 PANTHER PTHR30041:SF4 1 116 1.2E-53 T 22-04-2016 SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 Pfam PF03960 ArsC family 8 115 9.1E-20 T 22-04-2016 IPR006660 Arsenate reductase-like SAMA_RS10015 ba42dd2d085f27048b5fbc75d8af1057 116 Gene3D G3DSA:3.40.30.10 2 116 1.1E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 PRINTS PR00184 Neisseria sp. porin signature 106 125 3.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 PRINTS PR00184 Neisseria sp. porin signature 69 94 3.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 PRINTS PR00184 Neisseria sp. porin signature 310 334 3.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 PRINTS PR00184 Neisseria sp. porin signature 243 263 3.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 Pfam PF13609 Gram-negative porin 12 337 5.9E-44 T 22-04-2016 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 SUPERFAMILY SSF56935 307 361 1.47E-49 T 22-04-2016 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 SUPERFAMILY SSF56935 27 278 1.47E-49 T 22-04-2016 SAMA_RS02900 ec13a873241779b18d469f1e25674415 361 Gene3D G3DSA:2.40.160.10 27 361 6.8E-43 T 22-04-2016 IPR023614 Porin domain SAMA_RS12165 c2feb078e5e1a63bd4e610abf9b1c644 210 PIRSF PIRSF028688 4 209 4.1E-51 T 22-04-2016 IPR014549 Flagellar protein FlgO SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 PANTHER PTHR10342 224 535 4.1E-33 T 22-04-2016 SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 Pfam PF11893 Domain of unknown function (DUF3413) 9 245 3.8E-82 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 Pfam PF00884 Sulfatase 251 509 9.5E-11 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 PANTHER PTHR10342:SF235 224 535 4.1E-33 T 22-04-2016 SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 PIRSF PIRSF004950 7 594 8.4E-166 T 22-04-2016 IPR012159 Inner membrane protein YejM SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 SUPERFAMILY SSF53649 247 567 7.48E-36 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS08110 d3ae405203212633d26b3e3f491a67ec 594 Gene3D G3DSA:3.40.720.10 251 528 1.9E-14 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS14470 52511f8a6948d80315f694f0ad66d4d8 136 PANTHER PTHR35535 1 133 7.0E-23 T 22-04-2016 SAMA_RS14470 52511f8a6948d80315f694f0ad66d4d8 136 Pfam PF03724 META domain 32 131 2.4E-23 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ SAMA_RS09510 17a35cf87e4ba18e9a34c1baf5dfb867 170 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 157 4.5E-50 T 22-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 Gene3D G3DSA:3.40.190.10 92 194 1.0E-8 T 22-04-2016 SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 Gene3D G3DSA:1.10.10.10 5 86 4.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 Pfam PF03466 LysR substrate binding domain 92 295 7.4E-17 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.6E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 SUPERFAMILY SSF53850 92 295 5.79E-20 T 22-04-2016 SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 PANTHER PTHR30126:SF16 6 292 7.5E-76 T 22-04-2016 SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 SUPERFAMILY SSF46785 7 91 4.15E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08515 2a27be87c93336b67653ecc7998ac702 296 PANTHER PTHR30126 6 292 7.5E-76 T 22-04-2016 SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 Gene3D G3DSA:2.30.30.220 2 107 8.1E-49 T 22-04-2016 IPR007481 Stringent starvation protein B SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 Pfam PF04386 Stringent starvation protein B 7 152 1.3E-40 T 22-04-2016 IPR007481 Stringent starvation protein B SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 PIRSF PIRSF005276 1 152 8.2E-58 T 22-04-2016 IPR007481 Stringent starvation protein B SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 SUPERFAMILY SSF101738 3 112 1.29E-47 T 22-04-2016 IPR007481 Stringent starvation protein B SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 PANTHER PTHR37486 1 152 7.5E-81 T 22-04-2016 SAMA_RS15735 9925edd167e30a19cf9a5bc6cf44aa31 152 PANTHER PTHR37486:SF1 1 152 7.5E-81 T 22-04-2016 SAMA_RS07665 d4c2ff43f083db7a6216b68765daaca6 268 SUPERFAMILY SSF53850 27 253 4.98E-21 T 22-04-2016 SAMA_RS07665 d4c2ff43f083db7a6216b68765daaca6 268 Gene3D G3DSA:3.40.190.10 26 91 1.7E-5 T 22-04-2016 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 SUPERFAMILY SSF51905 2 295 1.12E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 2.3E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 Pfam PF01266 FAD dependent oxidoreductase 5 361 1.0E-43 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 Gene3D G3DSA:3.50.50.60 2 226 1.1E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PANTHER PTHR11985:SF1 5 390 2.5E-100 T 22-04-2016 SAMA_RS03340 449600d81737e1b50ef58c26436e1303 404 PANTHER PTHR11985 5 390 2.5E-100 T 22-04-2016 SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 PANTHER PTHR30305:SF2 1 187 6.7E-92 T 22-04-2016 SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 Pfam PF08274 PhnA Zinc-Ribbon 10 48 5.3E-6 T 22-04-2016 IPR013987 PhnA protein, N-terminal SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 SMART SM00782 6 48 1.5E-8 T 22-04-2016 IPR013991 PhnA protein N-terminal, proteobacterial SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 Gene3D G3DSA:2.30.30.40 123 187 1.0E-25 T 22-04-2016 SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 SUPERFAMILY SSF82057 118 187 5.49E-23 T 22-04-2016 SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 Pfam PF03831 PhnA domain 123 187 1.1E-26 T 22-04-2016 IPR013988 PhnA protein, C-terminal SAMA_RS05715 04e276efc92bc158f4227fad8bd361c6 188 PANTHER PTHR30305 1 187 6.7E-92 T 22-04-2016 SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 219 4.4E-73 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 PANTHER PTHR30098:SF2 9 230 2.0E-85 T 22-04-2016 SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 PANTHER PTHR30098 9 230 2.0E-85 T 22-04-2016 SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 SUPERFAMILY SSF55729 6 230 2.46E-94 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.804 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SAMA_RS10705 6e8854d91eb1497735b964b7b250f1e4 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 206 2.7E-75 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 360 1.5E-22 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 PANTHER PTHR22976 1 369 8.2E-192 T 22-04-2016 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 6 369 2.9E-163 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 PANTHER PTHR22976:SF17 1 369 8.2E-192 T 22-04-2016 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 SUPERFAMILY SSF102114 43 338 1.7E-44 T 22-04-2016 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 Gene3D G3DSA:3.20.20.70 43 362 8.1E-40 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09715 ff4691990fdcaea922d8247cf0a3d233 371 SMART SM00876 259 362 8.8E-31 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07735 2f65e84fef356bc4bc4be83f8b580ff6 818 Pfam PF02687 FtsX-like permease family 697 806 3.1E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS07735 2f65e84fef356bc4bc4be83f8b580ff6 818 Pfam PF02687 FtsX-like permease family 250 366 1.2E-5 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS07735 2f65e84fef356bc4bc4be83f8b580ff6 818 PANTHER PTHR30287 1 818 2.3E-135 T 22-04-2016 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.977 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 Gene3D G3DSA:3.90.940.10 1 78 5.4E-15 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 PANTHER PTHR34476 2 91 1.3E-29 T 22-04-2016 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 SMART SM01409 8 61 1.2E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 Pfam PF01192 RNA polymerase Rpb6 10 59 4.1E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 SUPERFAMILY SSF63562 2 79 3.4E-23 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS01430 46c53b2e27b17b525cb5114132e14295 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.0E-26 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SAMA_RS07465 11d2efcd5413c7d4f93c48615ab4e831 143 SUPERFAMILY SSF46785 6 134 2.63E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS07465 11d2efcd5413c7d4f93c48615ab4e831 143 Pfam PF01475 Ferric uptake regulator family 10 130 1.9E-46 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SAMA_RS07465 11d2efcd5413c7d4f93c48615ab4e831 143 PANTHER PTHR33202 6 135 6.3E-44 T 22-04-2016 SAMA_RS07465 11d2efcd5413c7d4f93c48615ab4e831 143 Gene3D G3DSA:1.10.10.10 4 82 1.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 Gene3D G3DSA:3.40.190.10 178 260 6.2E-21 T 22-04-2016 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 SUPERFAMILY SSF53850 88 292 6.36E-39 T 22-04-2016 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 Gene3D G3DSA:3.40.190.10 92 177 1.6E-20 T 22-04-2016 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 SUPERFAMILY SSF46785 2 88 3.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 PANTHER PTHR30537:SF27 1 309 4.3E-138 T 22-04-2016 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 PANTHER PTHR30537 1 309 4.3E-138 T 22-04-2016 SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 Gene3D G3DSA:1.10.10.10 2 87 4.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02170 e92f3e54cd443f13dc25de656410024d 314 Pfam PF03466 LysR substrate binding domain 88 291 7.0E-37 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.775 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 SUPERFAMILY SSF75625 1 238 2.35E-77 T 22-04-2016 IPR029072 YebC-like SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Gene3D G3DSA:3.30.1270.10 79 131 5.2E-32 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Gene3D G3DSA:3.30.1270.10 211 238 5.2E-32 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Gene3D G3DSA:3.30.70.980 132 204 4.6E-17 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Pfam PF01709 Transcriptional regulator 4 236 3.2E-72 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 PANTHER PTHR12532:SF4 1 240 1.2E-145 T 22-04-2016 SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 Gene3D G3DSA:1.10.10.200 1 78 5.1E-25 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SAMA_RS12595 e07981eeb0b1e28fcc8b3519b96ce400 240 PANTHER PTHR12532 1 240 1.2E-145 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 SUPERFAMILY SSF54523 43 204 9.42E-44 T 22-04-2016 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 PANTHER PTHR39583 2 238 8.9E-56 T 22-04-2016 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 7 31 1.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 Gene3D G3DSA:2.10.70.20 158 203 1.1E-9 T 22-04-2016 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 10 200 5.6E-49 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 PANTHER PTHR39583:SF1 2 238 8.9E-56 T 22-04-2016 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 Pfam PF11612 Type II secretion system (T2SS), protein J 62 198 1.5E-30 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 7.0E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00885 7850e131bd3cd24a10aec7957dfed58d 259 Gene3D G3DSA:3.10.610.10 41 153 6.8E-35 T 22-04-2016 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 PANTHER PTHR26402 931 1057 4.4E-24 T 22-04-2016 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 PANTHER PTHR26402 8 114 4.4E-24 T 22-04-2016 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 98 2.0E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 SUPERFAMILY SSF48452 765 907 6.07E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 Gene3D G3DSA:3.40.50.300 133 181 3.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 Gene3D G3DSA:1.10.10.10 3 99 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 SUPERFAMILY SSF46894 3 99 1.13E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 SUPERFAMILY SSF52540 134 365 5.96E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 Pfam PF13191 AAA ATPase domain 138 307 1.8E-11 T 22-04-2016 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 SMART SM00862 23 99 7.7E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 PANTHER PTHR26402:SF514 931 1057 4.4E-24 T 22-04-2016 SAMA_RS02320 500f8bab95f31df766fa557e112ee9e5 1074 PANTHER PTHR26402:SF514 8 114 4.4E-24 T 22-04-2016 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 116 126 2.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 233 249 2.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 183 195 2.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 287 304 2.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 85 99 2.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 4 99 3.2E-24 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PANTHER PTHR22807 4 363 7.7E-181 T 22-04-2016 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 37 304 9.9E-96 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 SUPERFAMILY SSF53335 5 304 4.69E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 412 460 1.3E-11 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Gene3D G3DSA:3.30.70.1170 35 72 2.4E-4 T 22-04-2016 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Gene3D G3DSA:3.40.50.150 96 304 7.5E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 2 467 62.892 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 PANTHER PTHR22807:SF38 4 363 7.7E-181 T 22-04-2016 SAMA_RS10635 0b8ce9997eeb7a5e1604e07da730dcfe 467 Pfam PF01189 16S rRNA methyltransferase RsmB/F 106 302 2.7E-47 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 SUPERFAMILY SSF46689 155 206 9.32E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 7.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 7.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 SMART SM00342 171 253 8.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 Gene3D G3DSA:1.10.10.60 208 253 2.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 PANTHER PTHR11019 29 253 3.1E-95 T 22-04-2016 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 Pfam PF12833 Helix-turn-helix domain 177 253 3.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 SUPERFAMILY SSF51182 29 156 9.79E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 SUPERFAMILY SSF46689 207 254 1.84E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 Pfam PF02311 AraC-like ligand binding domain 18 93 1.0E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 Gene3D G3DSA:1.10.10.60 171 207 7.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 Gene3D G3DSA:2.60.120.10 29 80 2.4E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS17235 cb3a3a2e5553011f842d8f530a169826 255 PANTHER PTHR11019:SF121 29 253 3.1E-95 T 22-04-2016 SAMA_RS02240 ef88aa4e3e954bc4b0a667ef1fd8a270 155 PANTHER PTHR33507:SF3 1 151 9.4E-29 T 22-04-2016 SAMA_RS02240 ef88aa4e3e954bc4b0a667ef1fd8a270 155 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 147 4.0E-12 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain SAMA_RS02240 ef88aa4e3e954bc4b0a667ef1fd8a270 155 PANTHER PTHR33507 1 151 9.4E-29 T 22-04-2016 SAMA_RS02240 ef88aa4e3e954bc4b0a667ef1fd8a270 155 Gene3D G3DSA:2.40.50.140 93 148 1.8E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05190 6e04562054221ed607e44df2801347ae 452 PANTHER PTHR32089:SF32 6 452 8.9E-209 T 22-04-2016 SAMA_RS05190 6e04562054221ed607e44df2801347ae 452 Pfam PF07670 Nucleoside recognition 138 233 1.7E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS05190 6e04562054221ed607e44df2801347ae 452 PANTHER PTHR32089 6 452 8.9E-209 T 22-04-2016 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 PANTHER PTHR11082:SF25 1 318 2.6E-146 T 22-04-2016 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 Pfam PF01207 Dihydrouridine synthase (Dus) 13 313 4.5E-107 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 Gene3D G3DSA:3.20.20.70 8 245 1.0E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 320 49.438 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 SUPERFAMILY SSF51395 10 318 1.61E-86 T 22-04-2016 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 Gene3D G3DSA:1.10.1200.80 253 320 3.3E-18 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 PIRSF PIRSF006621 1 323 1.9E-102 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 PANTHER PTHR11082 1 318 2.6E-146 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SAMA_RS16795 cf096747e946876ffa5ffb82dd511a84 323 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 317 3.2E-128 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 Gene3D G3DSA:3.40.50.300 118 274 1.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15840 045753821f05f19962a391fa54602f84 351 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 44 341 37.287 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 PANTHER PTHR32120:SF2 4 351 6.1E-155 T 22-04-2016 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 Pfam PF03193 Protein of unknown function, DUF258 102 277 9.6E-58 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 Gene3D G3DSA:1.10.40.50 277 346 1.6E-23 T 22-04-2016 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 SUPERFAMILY SSF52540 116 340 4.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15840 045753821f05f19962a391fa54602f84 351 PANTHER PTHR32120 4 351 6.1E-155 T 22-04-2016 SAMA_RS15840 045753821f05f19962a391fa54602f84 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 77 334 3.1E-81 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 9 455 8.2E-163 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 9 264 3.5E-99 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 Pfam PF11973 NQRA C-terminal domain 269 318 2.6E-18 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 PANTHER PTHR37839:SF1 6 455 1.2E-199 T 22-04-2016 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 PANTHER PTHR37839 6 455 1.2E-199 T 22-04-2016 SAMA_RS15555 3aa899b30ed16a20384dffc2f772c4ee 455 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 8 455 44.225 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 PANTHER PTHR11328 2 441 5.8E-137 T 22-04-2016 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 SUPERFAMILY SSF103473 8 421 1.22E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 PANTHER PTHR11328:SF24 2 441 5.8E-137 T 22-04-2016 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 Pfam PF13347 MFS/sugar transport protein 9 426 2.5E-106 T 22-04-2016 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 Gene3D G3DSA:1.20.1250.20 15 204 1.3E-19 T 22-04-2016 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 Gene3D G3DSA:1.20.1250.20 227 422 3.3E-10 T 22-04-2016 SAMA_RS07300 794f9d7e18b81ad7d42e0616b7953421 444 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 7 440 3.0E-127 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 SAMA_RS07160 6915c0d990c820ee0d7727b61ddda01a 136 PANTHER PTHR38013 4 135 1.6E-27 T 22-04-2016 SAMA_RS07160 6915c0d990c820ee0d7727b61ddda01a 136 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 30 131 1.5E-31 T 22-04-2016 SAMA_RS09370 fe3fcd581e3562af44ea3b3f95ee5ef0 66 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 8.9E-20 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SAMA_RS09370 fe3fcd581e3562af44ea3b3f95ee5ef0 66 PANTHER PTHR41532 2 49 9.2E-18 T 22-04-2016 SAMA_RS09370 fe3fcd581e3562af44ea3b3f95ee5ef0 66 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 1.8E-13 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SAMA_RS07625 e6abd4b1483e8aadc18d46ff1c476c5b 200 PANTHER PTHR13256 1 200 2.2E-84 T 22-04-2016 SAMA_RS07625 e6abd4b1483e8aadc18d46ff1c476c5b 200 SUPERFAMILY SSF55729 6 178 4.35E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07625 e6abd4b1483e8aadc18d46ff1c476c5b 200 Pfam PF13302 Acetyltransferase (GNAT) domain 15 152 5.7E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS07625 e6abd4b1483e8aadc18d46ff1c476c5b 200 Gene3D G3DSA:3.40.630.30 4 194 4.1E-58 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07625 e6abd4b1483e8aadc18d46ff1c476c5b 200 PANTHER PTHR13256:SF20 1 200 2.2E-84 T 22-04-2016 SAMA_RS13215 d1c44947bee9cee6faeda76880a20c7c 341 SUPERFAMILY SSF143631 27 335 7.06E-103 T 22-04-2016 IPR003374 ApbE-like domain SAMA_RS13215 d1c44947bee9cee6faeda76880a20c7c 341 PIRSF PIRSF006268 1 338 1.8E-92 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS13215 d1c44947bee9cee6faeda76880a20c7c 341 PANTHER PTHR30040:SF3 1 340 3.2E-177 T 22-04-2016 SAMA_RS13215 d1c44947bee9cee6faeda76880a20c7c 341 PANTHER PTHR30040 1 340 3.2E-177 T 22-04-2016 SAMA_RS13215 d1c44947bee9cee6faeda76880a20c7c 341 Pfam PF02424 ApbE family 35 313 4.0E-85 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 SUPERFAMILY SSF63892 4 241 4.58E-101 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.4E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 Gene3D G3DSA:3.20.20.70 3 240 6.3E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.181 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 PANTHER PTHR30456 2 245 3.1E-145 T 22-04-2016 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 7.3E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SAMA_RS04615 800a3a0ad30b2bdc820b5d061b89d99f 245 PANTHER PTHR30456:SF0 2 245 3.1E-145 T 22-04-2016 SAMA_RS11030 bed2c7103acfdb342abd21a49cdc78a8 72 Pfam PF11661 Protein of unknown function (DUF2986) 1 47 4.1E-16 T 22-04-2016 IPR021677 Protein of unknown function DUF2986 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 PANTHER PTHR10443 332 377 2.7E-97 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 PANTHER PTHR10443 61 291 2.7E-97 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 SUPERFAMILY SSF51556 331 378 1.11E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 SUPERFAMILY SSF51556 35 290 1.11E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 34 376 5.5E-85 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 PANTHER PTHR10443:SF24 332 377 2.7E-97 T 22-04-2016 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 PANTHER PTHR10443:SF24 61 291 2.7E-97 T 22-04-2016 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 Gene3D G3DSA:3.20.20.140 326 378 2.7E-74 T 22-04-2016 SAMA_RS14530 e4d4bbdfc22406d76d56a6854effbc31 379 Gene3D G3DSA:3.20.20.140 44 291 2.7E-74 T 22-04-2016 SAMA_RS14395 0a8b6d3724b40c82fc8dd1e9fe7934d4 137 SUPERFAMILY SSF46894 5 95 5.95E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS14395 0a8b6d3724b40c82fc8dd1e9fe7934d4 137 Gene3D G3DSA:1.10.10.10 5 96 7.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 SUPERFAMILY SSF51445 55 483 8.3E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 Pfam PF00128 Alpha amylase, catalytic domain 97 484 1.4E-20 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357 257 517 6.2E-120 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357 55 190 6.2E-120 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357 539 596 6.2E-120 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 Gene3D G3DSA:3.20.20.80 54 499 7.7E-72 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 SMART SM00642 59 541 1.1E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357:SF126 257 517 6.2E-120 T 22-04-2016 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357:SF126 55 190 6.2E-120 T 22-04-2016 SAMA_RS08665 778f4a3d822c34abce274646f1dbb3c1 626 PANTHER PTHR10357:SF126 539 596 6.2E-120 T 22-04-2016 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 Pfam PF01411 tRNA synthetases class II (A) 8 553 1.3E-227 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PANTHER PTHR11777:SF9 1 873 0.0 T 22-04-2016 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 SUPERFAMILY SSF50447 453 550 1.34E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 SUPERFAMILY SSF101353 254 463 1.06E-59 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 203.968 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 Pfam PF02272 DHHA1 domain 799 865 4.9E-14 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 SMART SM00863 651 694 2.7E-23 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 Gene3D G3DSA:3.30.930.10 4 250 7.5E-121 T 22-04-2016 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 694 3.3E-20 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 852 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 SUPERFAMILY SSF55681 4 253 2.73E-106 T 22-04-2016 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 1.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 1.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 1.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 1.1E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 SUPERFAMILY SSF55186 550 709 4.06E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SAMA_RS05460 3c38341cefa353433a05b376ac00d104 873 PANTHER PTHR11777 1 873 0.0 T 22-04-2016 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PRINTS PR01576 Peptide deformylase signature 120 149 3.2E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PRINTS PR01576 Peptide deformylase signature 89 100 3.2E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PRINTS PR01576 Peptide deformylase signature 33 62 3.2E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PRINTS PR01576 Peptide deformylase signature 101 119 3.2E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 8.1E-60 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PANTHER PTHR10458:SF10 1 166 3.9E-104 T 22-04-2016 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PIRSF PIRSF004749 1 167 4.3E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 SUPERFAMILY SSF56420 3 163 1.14E-61 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS00205 302f626918c3062c142345edaed7826b 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.41 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS00205 302f626918c3062c142345edaed7826b 167 Pfam PF01327 Polypeptide deformylase 5 152 3.6E-51 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS00205 302f626918c3062c142345edaed7826b 167 Gene3D G3DSA:3.90.45.10 5 164 9.8E-65 T 22-04-2016 IPR023635 Peptide deformylase SAMA_RS00205 302f626918c3062c142345edaed7826b 167 PANTHER PTHR10458 1 166 3.9E-104 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SAMA_RS17380 59a84dd2491f795c6bbd139fa38b1729 154 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 118 154 7.0E-15 T 22-04-2016 SAMA_RS17380 59a84dd2491f795c6bbd139fa38b1729 154 PANTHER PTHR12714:SF7 53 154 5.5E-15 T 22-04-2016 SAMA_RS17380 59a84dd2491f795c6bbd139fa38b1729 154 Pfam PF04191 Phospholipid methyltransferase 43 141 2.6E-11 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 SAMA_RS17380 59a84dd2491f795c6bbd139fa38b1729 154 PANTHER PTHR12714 53 154 5.5E-15 T 22-04-2016 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 PANTHER PTHR30566:SF5 251 522 2.6E-48 T 22-04-2016 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 395 429 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 PANTHER PTHR30566 251 522 2.6E-48 T 22-04-2016 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 Gene3D G3DSA:2.30.30.60 381 429 1.0E-14 T 22-04-2016 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 SUPERFAMILY SSF50182 366 431 6.87E-13 T 22-04-2016 IPR010920 LSM domain SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 Gene3D G3DSA:3.30.70.100 435 522 1.4E-6 T 22-04-2016 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 SUPERFAMILY SSF82861 280 364 7.06E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 Pfam PF00924 Mechanosensitive ion channel 323 523 1.7E-45 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS08220 7ee0fde2ab93cd9976fa9691c8091b3d 534 SUPERFAMILY SSF82689 434 523 1.57E-8 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 Gene3D G3DSA:3.30.1420.10 4 40 5.1E-16 T 22-04-2016 SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 PANTHER PTHR37010:SF1 2 112 6.6E-56 T 22-04-2016 SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 7 112 1.0E-49 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 Gene3D G3DSA:1.10.10.370 42 112 2.1E-37 T 22-04-2016 SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 PIRSF PIRSF006223 5 112 2.3E-43 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 Pfam PF04358 DsrC like protein 7 112 1.9E-44 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 SUPERFAMILY SSF69721 6 112 2.49E-41 T 22-04-2016 IPR025526 DsrC-like domain SAMA_RS09270 97f8b23df7cb947283f8525ce7ffcc7b 112 PANTHER PTHR37010 2 112 6.6E-56 T 22-04-2016 SAMA_RS06720 8a2a77bfeea62991c28d8a6f02ded461 80 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 80 1.0E-31 T 22-04-2016 IPR019620 Putative metal-binding protein SAMA_RS06720 8a2a77bfeea62991c28d8a6f02ded461 80 Pfam PF10678 Protein of unknown function (DUF2492) 3 79 9.2E-31 T 22-04-2016 IPR019620 Putative metal-binding protein SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.524 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 4.3E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 4.3E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 4.3E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 4.3E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 4.3E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 7.4E-79 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 SUPERFAMILY SSF54782 221 308 6.41E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Gene3D G3DSA:3.40.190.10 111 199 5.1E-40 T 22-04-2016 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 3.0E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Gene3D G3DSA:3.40.190.10 3 110 2.0E-48 T 22-04-2016 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 Gene3D G3DSA:3.30.160.40 221 305 1.3E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 SUPERFAMILY SSF53850 5 219 2.17E-85 T 22-04-2016 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PANTHER PTHR11557 5 310 4.3E-166 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 PIRSF PIRSF001438 1 310 9.9E-123 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16940 297a664846a163ea63203a9c180b6456 310 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 3.9E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS11110 6549593d2ed02fff2ffb89d8bddd6918 262 PANTHER PTHR33969:SF2 16 262 6.6E-81 T 22-04-2016 SAMA_RS11110 6549593d2ed02fff2ffb89d8bddd6918 262 PANTHER PTHR33969 16 262 6.6E-81 T 22-04-2016 SAMA_RS11110 6549593d2ed02fff2ffb89d8bddd6918 262 Hamap MF_01805 Segregation and condensation protein A [scpA]. 32 262 19.372 T 22-04-2016 IPR003768 Segregation and condensation protein A SAMA_RS11110 6549593d2ed02fff2ffb89d8bddd6918 262 Pfam PF02616 Segregation and condensation protein ScpA 49 260 5.1E-25 T 22-04-2016 IPR003768 Segregation and condensation protein A SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 PANTHER PTHR30592 5 282 5.9E-172 T 22-04-2016 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 Gene3D G3DSA:3.40.140.10 139 274 8.0E-51 T 22-04-2016 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 Gene3D G3DSA:3.10.20.10 40 122 4.3E-16 T 22-04-2016 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 SUPERFAMILY SSF53927 22 270 1.38E-69 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 Pfam PF02634 FdhD/NarQ family 39 270 3.6E-74 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 PANTHER PTHR30592:SF2 5 282 5.9E-172 T 22-04-2016 SAMA_RS18800 2cb1a428ee74d5301de25841d8320102 282 PIRSF PIRSF015626 3 275 1.6E-85 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 PANTHER PTHR26402 16 139 4.5E-41 T 22-04-2016 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 306 6.1E-51 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 SUPERFAMILY SSF55073 150 307 1.1E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 Pfam PF00072 Response regulator receiver domain 18 129 4.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 SMART SM00448 16 128 2.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 304 2.1E-49 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 PANTHER PTHR26402:SF495 16 139 4.5E-41 T 22-04-2016 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 Gene3D G3DSA:3.40.50.2300 13 139 1.7E-35 T 22-04-2016 SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 SMART SM00267 134 308 2.9E-58 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 SUPERFAMILY SSF52172 15 145 5.12E-34 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03930 8e5cadc3e87304ac996dba8632b56bc3 312 Gene3D G3DSA:3.30.70.270 147 307 3.2E-51 T 22-04-2016 SAMA_RS09275 9abf6299b6301b4fa054368a60048512 97 PANTHER PTHR37526 2 97 1.2E-15 T 22-04-2016 SAMA_RS09275 9abf6299b6301b4fa054368a60048512 97 SUPERFAMILY SSF75169 2 97 2.59E-20 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09275 9abf6299b6301b4fa054368a60048512 97 Pfam PF04077 DsrH like protein 9 94 1.2E-16 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SAMA_RS09275 9abf6299b6301b4fa054368a60048512 97 Gene3D G3DSA:3.40.1260.10 1 95 7.6E-17 T 22-04-2016 IPR027396 DsrEFH-like SAMA_RS09275 9abf6299b6301b4fa054368a60048512 97 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 97 2.0E-17 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SAMA_RS07515 a87762ed484772c915e807c4cd91608a 116 SUPERFAMILY SSF48695 31 106 2.02E-16 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS07515 a87762ed484772c915e807c4cd91608a 116 Pfam PF14537 Cytochrome c3 33 105 2.2E-12 T 22-04-2016 SAMA_RS07515 a87762ed484772c915e807c4cd91608a 116 Gene3D G3DSA:1.10.1130.10 34 109 7.8E-14 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 Pfam PF00483 Nucleotidyl transferase 16 251 1.3E-68 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 PANTHER PTHR22572 16 282 3.0E-162 T 22-04-2016 SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 16 300 7.7E-150 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 Gene3D G3DSA:3.90.550.10 15 280 7.7E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 SUPERFAMILY SSF53448 15 300 1.78E-88 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS11740 0dc53183083ed99358c5d76c8bc07707 305 PANTHER PTHR22572:SF105 16 282 3.0E-162 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992:SF854 5 141 1.9E-59 T 22-04-2016 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992:SF854 365 472 1.9E-59 T 22-04-2016 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992:SF854 173 263 1.9E-59 T 22-04-2016 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 Pfam PF08386 TAP-like protein 379 478 8.8E-19 T 22-04-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 126 137 1.1E-5 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 95 103 1.1E-5 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 200 214 1.1E-5 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 SUPERFAMILY SSF53474 48 140 6.4E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 SUPERFAMILY SSF53474 172 442 6.4E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 Gene3D G3DSA:3.40.50.1820 59 142 8.1E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 Gene3D G3DSA:3.40.50.1820 354 465 8.1E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 Gene3D G3DSA:3.40.50.1820 174 295 8.1E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992 5 141 1.9E-59 T 22-04-2016 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992 365 472 1.9E-59 T 22-04-2016 SAMA_RS18575 18492c0b144ccb9179ab70d3cf6422e1 507 PANTHER PTHR10992 173 263 1.9E-59 T 22-04-2016 SAMA_RS14665 139096a0573298a297a2bce36d7d2dd3 125 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 4.0E-42 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 SAMA_RS14665 139096a0573298a297a2bce36d7d2dd3 125 PIRSF PIRSF028770 1 125 7.1E-56 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 Pfam PF01694 Rhomboid family 193 340 8.1E-38 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 SUPERFAMILY SSF144091 151 340 2.49E-42 T 22-04-2016 SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 Gene3D G3DSA:1.20.1540.10 152 339 2.8E-41 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 PANTHER PTHR22936 153 336 5.6E-32 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 Pfam PF13453 Transcription factor zinc-finger 7 46 2.3E-12 T 22-04-2016 IPR027392 Transcription factor zinc-finger SAMA_RS03870 79926590a6f5b30f5d67df82296dd8ef 362 Pfam PF13453 Transcription factor zinc-finger 74 113 1.7E-8 T 22-04-2016 IPR027392 Transcription factor zinc-finger SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 17 290 2.2E-61 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 PIRSF PIRSF001394 1 511 1.2E-218 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 Gene3D G3DSA:3.20.130.10 309 496 4.6E-71 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 Pfam PF05683 Fumarase C-terminus 295 497 3.0E-81 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 PANTHER PTHR30389:SF1 8 506 0.0 T 22-04-2016 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 Pfam PF05681 Fumarate hydratase (Fumerase) 17 291 4.4E-98 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 SUPERFAMILY SSF117457 322 496 4.84E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 332 493 5.2E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SAMA_RS08810 917ddcc9b7290b3c0e41a56a82164878 511 PANTHER PTHR30389 8 506 0.0 T 22-04-2016 SAMA_RS00985 2ccca48a2e4e0a9749156ea228fb248f 151 Gene3D G3DSA:3.30.70.330 61 146 4.2E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SAMA_RS00985 2ccca48a2e4e0a9749156ea228fb248f 151 PANTHER PTHR24012 62 144 1.5E-22 T 22-04-2016 SAMA_RS00985 2ccca48a2e4e0a9749156ea228fb248f 151 SUPERFAMILY SSF54928 61 143 2.28E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SAMA_RS00985 2ccca48a2e4e0a9749156ea228fb248f 151 SMART SM00360 65 137 2.9E-24 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 SAMA_RS00985 2ccca48a2e4e0a9749156ea228fb248f 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 6.1E-20 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 Gene3D G3DSA:3.40.50.720 1 162 9.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 3.9E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 3.9E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 3.9E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 3.9E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 3.9E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PIRSF PIRSF000149 1 337 8.9E-130 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 2.8E-53 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 SUPERFAMILY SSF55347 154 316 5.95E-60 T 22-04-2016 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 154 2.4E-49 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 62.962 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 SUPERFAMILY SSF51735 2 176 2.09E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 SMART SM00846 2 154 5.9E-75 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PANTHER PTHR10836 1 338 3.8E-218 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 327 1.1E-160 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 Gene3D G3DSA:3.30.360.10 163 317 1.0E-63 T 22-04-2016 SAMA_RS14425 11d6bc0994f2f1052012dab07e9f9590 338 PANTHER PTHR10836:SF47 1 338 3.8E-218 T 22-04-2016 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 Gene3D G3DSA:3.40.190.10 95 169 5.0E-11 T 22-04-2016 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 Gene3D G3DSA:3.40.190.10 170 245 9.6E-9 T 22-04-2016 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 Pfam PF03466 LysR substrate binding domain 94 277 4.3E-15 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 SUPERFAMILY SSF46785 2 85 3.29E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 SUPERFAMILY SSF53850 94 279 7.96E-20 T 22-04-2016 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 Gene3D G3DSA:1.10.10.10 4 86 3.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS18395 12963b6e6c74c3133c9fdb0e971aa452 284 PANTHER PTHR30537 1 278 2.6E-57 T 22-04-2016 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PANTHER PTHR24422 5 277 7.5E-123 T 22-04-2016 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 SUPERFAMILY SSF53335 76 272 2.74E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 3.1E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 SMART SM00138 8 273 7.8E-107 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 52 1.7E-11 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 PANTHER PTHR24422:SF9 5 277 7.5E-123 T 22-04-2016 SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 270 3.5E-63 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 SUPERFAMILY SSF47757 5 75 1.57E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 Gene3D G3DSA:1.10.155.10 5 74 5.5E-12 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SAMA_RS12135 5efa9de26abd11f2fad2a150fe1459aa 277 Gene3D G3DSA:3.40.50.150 75 272 4.9E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08350 515556cd150c1a6794f2fe04abdc4eab 75 PANTHER PTHR34386:SF2 1 72 5.1E-21 T 22-04-2016 SAMA_RS08350 515556cd150c1a6794f2fe04abdc4eab 75 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 64 5.3E-11 T 22-04-2016 IPR008554 Glutaredoxin-like SAMA_RS08350 515556cd150c1a6794f2fe04abdc4eab 75 PANTHER PTHR34386 1 72 5.1E-21 T 22-04-2016 SAMA_RS08350 515556cd150c1a6794f2fe04abdc4eab 75 SUPERFAMILY SSF52833 4 69 2.61E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS08350 515556cd150c1a6794f2fe04abdc4eab 75 Gene3D G3DSA:3.40.30.10 3 71 6.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 483 604 1.3E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 SMART SM00091 484 550 2.1E-6 T 22-04-2016 IPR000014 PAS domain SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 Gene3D G3DSA:3.30.450.20 472 595 1.5E-18 T 22-04-2016 SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 SUPERFAMILY SSF103190 137 221 2.12E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 Pfam PF08448 PAS fold 490 599 7.2E-15 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 Gene3D G3DSA:3.30.450.20 179 265 5.7E-10 T 22-04-2016 SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 Gene3D G3DSA:3.30.450.20 328 374 5.7E-10 T 22-04-2016 SAMA_RS10220 fe149c3a16989840ab051bbee62fb22d 849 SUPERFAMILY SSF55785 472 594 1.01E-17 T 22-04-2016 IPR000014 PAS domain SAMA_RS06085 77bfb2d36da5adf593b84b9b13b4cc52 437 SUPERFAMILY SSF55073 262 419 6.43E-20 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS06085 77bfb2d36da5adf593b84b9b13b4cc52 437 SMART SM00267 246 421 5.2E-13 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06085 77bfb2d36da5adf593b84b9b13b4cc52 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 420 1.2E-16 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06085 77bfb2d36da5adf593b84b9b13b4cc52 437 Gene3D G3DSA:3.30.70.270 258 420 3.8E-22 T 22-04-2016 SAMA_RS06085 77bfb2d36da5adf593b84b9b13b4cc52 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 417 1.9E-17 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 1.1E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 PANTHER PTHR30349 8 296 3.1E-147 T 22-04-2016 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 SUPERFAMILY SSF56349 6 284 2.65E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 291 35.795 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 PANTHER PTHR30349:SF17 8 296 3.1E-147 T 22-04-2016 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 Pfam PF00589 Phage integrase family 110 277 9.4E-46 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 Gene3D G3DSA:1.10.443.10 111 285 3.2E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 Gene3D G3DSA:1.10.150.130 6 97 2.6E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SAMA_RS16905 49738b90ae06c77d2c31ee4580e6936d 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 293 1.3E-105 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SAMA_RS11695 79ecfb31a23d36568ee87bc60af490e4 245 Pfam PF02698 DUF218 domain 79 235 7.8E-25 T 22-04-2016 IPR003848 Domain of unknown function DUF218 SAMA_RS11695 79ecfb31a23d36568ee87bc60af490e4 245 Gene3D G3DSA:3.40.50.620 90 209 8.5E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS11695 79ecfb31a23d36568ee87bc60af490e4 245 PANTHER PTHR30336:SF1 1 242 7.9E-47 T 22-04-2016 SAMA_RS11695 79ecfb31a23d36568ee87bc60af490e4 245 PANTHER PTHR30336 1 242 7.9E-47 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.2E-176 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.9E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 8.3E-120 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 SUPERFAMILY SSF51998 222 740 4.27E-166 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.6E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Pfam PF03477 ATP cone domain 5 92 2.8E-14 T 22-04-2016 IPR005144 ATP-cone domain SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PANTHER PTHR11573:SF17 6 753 0.0 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 SUPERFAMILY SSF48168 10 221 4.58E-72 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 PANTHER PTHR11573 6 753 0.0 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Gene3D G3DSA:3.20.70.20 610 699 1.6E-42 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Gene3D G3DSA:3.20.70.20 135 344 1.6E-42 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 Gene3D G3DSA:3.20.70.20 398 559 1.6E-42 T 22-04-2016 SAMA_RS09010 3212d307ce4f496470eebccfdc90cf50 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Pfam PF13286 Phosphohydrolase-associated domain 335 427 7.1E-29 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 SMART SM00471 54 258 3.7E-11 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Gene3D G3DSA:1.10.3550.10 347 425 1.0E-7 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Pfam PF01966 HD domain 58 141 2.1E-9 T 22-04-2016 IPR006674 HD domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 SUPERFAMILY SSF109604 226 432 1.45E-82 T 22-04-2016 SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 SUPERFAMILY SSF109604 19 163 1.45E-82 T 22-04-2016 SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 429 35.86 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Gene3D G3DSA:1.10.3410.10 245 346 3.7E-28 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 20 430 3.2E-119 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 Gene3D G3DSA:1.10.3210.10 5 244 1.9E-67 T 22-04-2016 IPR006674 HD domain SAMA_RS08845 3279c30c4eefce0e0cdebeaef28bc319 443 PANTHER PTHR11373 21 190 1.1E-51 T 22-04-2016 SAMA_RS08430 f662a877229a3b08adaaf8e1d2ff0d5d 182 PANTHER PTHR37425 1 182 2.4E-54 T 22-04-2016 SAMA_RS08430 f662a877229a3b08adaaf8e1d2ff0d5d 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 33 182 1.0E-63 T 22-04-2016 IPR010275 Protein of unknown function DUF882 SAMA_RS08430 f662a877229a3b08adaaf8e1d2ff0d5d 182 Gene3D G3DSA:3.30.1380.10 71 182 2.3E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SAMA_RS08430 f662a877229a3b08adaaf8e1d2ff0d5d 182 SUPERFAMILY SSF55166 65 182 2.55E-33 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SAMA_RS05295 565c61c1d6b662c29f346eef6c0f68e7 149 Pfam PF03477 ATP cone domain 50 136 6.7E-19 T 22-04-2016 IPR005144 ATP-cone domain SAMA_RS05295 565c61c1d6b662c29f346eef6c0f68e7 149 PANTHER PTHR30455 2 149 5.7E-75 T 22-04-2016 SAMA_RS05295 565c61c1d6b662c29f346eef6c0f68e7 149 PANTHER PTHR30455:SF2 2 149 5.7E-75 T 22-04-2016 SAMA_RS05295 565c61c1d6b662c29f346eef6c0f68e7 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 9.2E-72 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SAMA_RS05295 565c61c1d6b662c29f346eef6c0f68e7 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.055 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 SUPERFAMILY SSF51366 3 218 3.66E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 Gene3D G3DSA:3.20.20.70 2 221 2.7E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 PANTHER PTHR11749 2 222 1.9E-140 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.7E-98 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 PIRSF PIRSF001461 1 224 1.7E-105 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 PANTHER PTHR11749:SF7 2 222 1.9E-140 T 22-04-2016 SAMA_RS17500 ce8f4fc51ae8734659fbf7f0bbc8eea7 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.4E-92 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SAMA_RS15205 ad957927d2b7462c1c1ef35aac3840e8 116 PIRSF PIRSF037266 9 104 2.7E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 SAMA_RS15205 ad957927d2b7462c1c1ef35aac3840e8 116 Pfam PF09904 Winged helix-turn helix 13 101 1.1E-38 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 SAMA_RS08135 d554ce64aa0343cc555b48bbe222721e 282 PANTHER PTHR21666 62 273 3.5E-87 T 22-04-2016 SAMA_RS08135 d554ce64aa0343cc555b48bbe222721e 282 Pfam PF01551 Peptidase family M23 165 260 5.8E-25 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS08135 d554ce64aa0343cc555b48bbe222721e 282 SUPERFAMILY SSF51261 30 262 2.49E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS08135 d554ce64aa0343cc555b48bbe222721e 282 PANTHER PTHR21666:SF224 62 273 3.5E-87 T 22-04-2016 SAMA_RS08135 d554ce64aa0343cc555b48bbe222721e 282 Gene3D G3DSA:2.70.70.10 113 264 5.7E-38 T 22-04-2016 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 Pfam PF00246 Zinc carboxypeptidase 128 344 5.0E-24 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 Gene3D G3DSA:3.40.630.10 98 372 1.6E-47 T 22-04-2016 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 PANTHER PTHR12756:SF18 1 303 1.3E-153 T 22-04-2016 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 SMART SM00631 112 354 4.0E-5 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 SUPERFAMILY SSF53187 106 374 1.01E-61 T 22-04-2016 SAMA_RS08965 b78f4d0fb64f552b7e8886f012a4e14a 375 PANTHER PTHR12756 1 303 1.3E-153 T 22-04-2016 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 PANTHER PTHR12934 1 144 1.4E-71 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.653 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-48 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.3E-30 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 Gene3D G3DSA:3.100.10.10 32 143 2.3E-25 T 22-04-2016 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01220 391bdfd49d49491edac9f56209a62f80 144 SUPERFAMILY SSF52080 4 143 2.35E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SAMA_RS18200 0757a3598da55ef6a1196ff7f5c5b629 349 Pfam PF01522 Polysaccharide deacetylase 71 206 3.4E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SAMA_RS18200 0757a3598da55ef6a1196ff7f5c5b629 349 PANTHER PTHR34216 15 348 4.1E-96 T 22-04-2016 SAMA_RS18200 0757a3598da55ef6a1196ff7f5c5b629 349 SUPERFAMILY SSF88713 33 209 7.51E-34 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SAMA_RS18200 0757a3598da55ef6a1196ff7f5c5b629 349 PANTHER PTHR34216:SF1 15 348 4.1E-96 T 22-04-2016 SAMA_RS18200 0757a3598da55ef6a1196ff7f5c5b629 349 Gene3D G3DSA:3.20.20.370 46 206 5.2E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 Gene3D G3DSA:3.40.50.1970 3 184 4.2E-35 T 22-04-2016 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 Gene3D G3DSA:1.20.1090.10 187 304 2.4E-21 T 22-04-2016 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 PANTHER PTHR11496 1 356 3.2E-127 T 22-04-2016 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 PANTHER PTHR11496:SF68 1 356 3.2E-127 T 22-04-2016 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 SUPERFAMILY SSF56796 3 330 1.44E-68 T 22-04-2016 SAMA_RS08570 99e5949026b94d4602883ef86d4a315c 356 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 329 2.7E-56 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SAMA_RS02380 69f2892bc18ae3ebcb98b79cc8a8d7d1 185 Gene3D G3DSA:3.30.70.1070 106 183 1.3E-26 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS02380 69f2892bc18ae3ebcb98b79cc8a8d7d1 185 Pfam PF05036 Sporulation related domain 107 177 2.1E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS02380 69f2892bc18ae3ebcb98b79cc8a8d7d1 185 SUPERFAMILY SSF110997 106 183 1.27E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 5 177 2.0E-49 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 PANTHER PTHR30309 1 195 9.8E-87 T 22-04-2016 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 187 5.8E-68 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 PANTHER PTHR30309:SF0 1 195 9.8E-87 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 1 186 18.95 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SAMA_RS04340 84af11536bd05ba4cd8ee1dc969bee57 195 SMART SM01207 3 178 5.8E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 SUPERFAMILY SSF52218 1 148 1.34E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 PRINTS PR00369 Flavodoxin signature 5 18 2.3E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 PRINTS PR00369 Flavodoxin signature 108 127 2.3E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 PRINTS PR00369 Flavodoxin signature 53 64 2.3E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 PRINTS PR00369 Flavodoxin signature 84 94 2.3E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 Gene3D G3DSA:3.40.50.360 1 149 4.9E-36 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 PANTHER PTHR19384 1 144 4.1E-28 T 22-04-2016 SAMA_RS05935 fe2b0e9a0849ee04f4f60c87ad2ab82e 154 Pfam PF00258 Flavodoxin 7 140 2.4E-26 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SAMA_RS05930 4bfbae4e39d376a1fe212ee824a7dfbd 270 SUPERFAMILY SSF55120 21 259 7.36E-58 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05930 4bfbae4e39d376a1fe212ee824a7dfbd 270 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 70 84 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05930 4bfbae4e39d376a1fe212ee824a7dfbd 270 PANTHER PTHR11079 23 265 3.8E-88 T 22-04-2016 SAMA_RS05930 4bfbae4e39d376a1fe212ee824a7dfbd 270 Pfam PF00849 RNA pseudouridylate synthase 31 190 1.5E-34 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS05930 4bfbae4e39d376a1fe212ee824a7dfbd 270 PANTHER PTHR11079:SF60 23 265 3.8E-88 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 Pfam PF07695 7TM diverse intracellular signalling 196 392 1.0E-26 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 PANTHER PTHR10799:SF750 443 571 1.6E-25 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 PANTHER PTHR10799:SF750 195 343 1.6E-25 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 SMART SM00267 399 571 1.4E-57 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 569 2.0E-50 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 Gene3D G3DSA:3.30.70.270 411 569 1.5E-48 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 Pfam PF07696 7TMR-DISM extracellular 2 52 179 8.0E-10 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 SUPERFAMILY SSF55073 415 569 1.8E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 PANTHER PTHR10799 443 571 1.6E-25 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 PANTHER PTHR10799 195 343 1.6E-25 T 22-04-2016 SAMA_RS15595 dbf34182dfc6f34d4e7262f9c6025fa7 577 Pfam PF00990 Diguanylate cyclase, GGDEF domain 410 567 3.1E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10955 a9bc8007c3d4771a863f7788521bf5b3 439 Pfam PF13726 Na+-H+ antiporter family 2 88 2.9E-32 T 22-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal SAMA_RS10955 a9bc8007c3d4771a863f7788521bf5b3 439 Pfam PF03553 Na+/H+ antiporter family 150 433 4.1E-66 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS10955 a9bc8007c3d4771a863f7788521bf5b3 439 PANTHER PTHR37821 1 439 1.1E-181 T 22-04-2016 SAMA_RS10955 a9bc8007c3d4771a863f7788521bf5b3 439 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 9.0E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS10955 a9bc8007c3d4771a863f7788521bf5b3 439 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 9.0E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 Gene3D G3DSA:3.40.30.10 6 101 1.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 SUPERFAMILY SSF52833 1 103 9.8E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 PANTHER PTHR10293 1 110 1.1E-52 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 8.9E-45 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 PIRSF PIRSF005894 1 107 1.5E-49 T 22-04-2016 IPR014434 Monothiol glutaredoxin SAMA_RS10040 3f8130171d9eeca337f6532be0a9ffe9 110 Pfam PF00462 Glutaredoxin 16 80 2.2E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 PANTHER PTHR24220 5 327 3.2E-175 T 22-04-2016 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 6.3E-15 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 322 1.4E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 SUPERFAMILY SSF52540 2 257 2.19E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 PANTHER PTHR24220:SF514 5 327 3.2E-175 T 22-04-2016 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 Pfam PF00005 ABC transporter 23 186 4.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS06460 7cae3000eacea4d9f664d4bf600fd71a 335 Gene3D G3DSA:3.40.50.300 2 259 7.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16675 8a36f95cc4d4b54efca444049e340999 345 Pfam PF00491 Arginase family 50 316 1.1E-17 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SAMA_RS16675 8a36f95cc4d4b54efca444049e340999 345 SUPERFAMILY SSF52768 44 319 1.01E-47 T 22-04-2016 SAMA_RS16675 8a36f95cc4d4b54efca444049e340999 345 Gene3D G3DSA:3.40.800.10 41 331 4.9E-48 T 22-04-2016 IPR023696 Ureohydrolase domain SAMA_RS16675 8a36f95cc4d4b54efca444049e340999 345 PANTHER PTHR11358 102 269 5.7E-15 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SAMA_RS03700 e510734e74795fa2e61bd43db4481bf2 457 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 8 51 3.6E-5 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal SAMA_RS17850 97c5cb60f4283bc2c4cd31871c996b8e 163 PANTHER PTHR38102 1 161 3.6E-28 T 22-04-2016 SAMA_RS17850 97c5cb60f4283bc2c4cd31871c996b8e 163 Pfam PF07813 LTXXQ motif family protein 39 144 6.0E-16 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SAMA_RS17850 97c5cb60f4283bc2c4cd31871c996b8e 163 PIRSF PIRSF034445 1 156 1.3E-32 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SAMA_RS17850 97c5cb60f4283bc2c4cd31871c996b8e 163 PANTHER PTHR38102:SF1 1 161 3.6E-28 T 22-04-2016 SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Pfam PF02146 Sir2 family 10 183 4.8E-44 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 PANTHER PTHR11085 3 230 1.9E-72 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Gene3D G3DSA:3.40.50.1220 3 20 1.6E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Gene3D G3DSA:3.40.50.1220 159 231 1.6E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Gene3D G3DSA:3.40.50.1220 72 110 1.6E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 SUPERFAMILY SSF52467 3 231 1.53E-70 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 233 54.38 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Gene3D G3DSA:3.30.1600.10 21 58 4.1E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SAMA_RS07470 91fd6874033d5e9a4f5d87556cc30b1f 248 Gene3D G3DSA:3.30.1600.10 111 155 4.1E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PANTHER PTHR11444 2 450 3.5E-241 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Gene3D G3DSA:1.10.40.30 402 456 1.8E-19 T 22-04-2016 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Pfam PF10415 Fumarase C C-terminus 402 455 4.7E-19 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 SUPERFAMILY SSF48557 4 451 4.86E-130 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 456 70.389 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Gene3D G3DSA:1.10.275.10 2 132 4.6E-45 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 4.1E-6 T 22-04-2016 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 4.1E-6 T 22-04-2016 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 4.1E-6 T 22-04-2016 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Pfam PF00206 Lyase 11 336 9.4E-88 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 4.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 4.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 4.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 4.9E-29 T 22-04-2016 IPR000362 Fumarate lyase family SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 PANTHER PTHR11444:SF22 2 450 3.5E-241 T 22-04-2016 SAMA_RS04305 1c2fade327133a8b60ab87d595ad3b44 457 Gene3D G3DSA:1.20.200.10 133 396 2.7E-82 T 22-04-2016 SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 SUPERFAMILY SSF52540 49 169 2.53E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 323 1.3E-80 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 Gene3D G3DSA:3.40.50.300 157 166 1.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 Gene3D G3DSA:3.40.50.300 48 121 1.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 336 40.22 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 PANTHER PTHR30160 1 336 2.8E-92 T 22-04-2016 SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 PANTHER PTHR30160:SF13 1 336 2.8E-92 T 22-04-2016 SAMA_RS06985 ec2f9978b45d57d194af3b1e16bcdddd 349 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 335 1.5E-113 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SAMA_RS08470 b15bc674b77ff9b75c0d1f3b3f837282 85 PANTHER PTHR38603 1 85 5.2E-18 T 22-04-2016 SAMA_RS08470 b15bc674b77ff9b75c0d1f3b3f837282 85 Pfam PF03927 NapD protein 5 78 5.8E-26 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SAMA_RS04750 1e49d2db63c106a7cca068de6c522503 179 Gene3D G3DSA:1.20.120.520 2 149 5.5E-11 T 22-04-2016 SAMA_RS04750 1e49d2db63c106a7cca068de6c522503 179 Pfam PF01814 Hemerythrin HHE cation binding domain 3 134 2.1E-10 T 22-04-2016 IPR012312 Haemerythrin-like SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 Pfam PF00753 Metallo-beta-lactamase superfamily 509 680 1.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 Pfam PF03772 Competence protein 196 476 2.0E-60 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 218 403 3.5E-24 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 Pfam PF13567 Domain of unknown function (DUF4131) 18 162 3.6E-13 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 PANTHER PTHR30619:SF2 1 758 8.0E-168 T 22-04-2016 SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 PANTHER PTHR30619 1 758 8.0E-168 T 22-04-2016 SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 Gene3D G3DSA:3.60.15.10 500 714 3.1E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 98 726 1.0E-115 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 SUPERFAMILY SSF56281 500 737 2.23E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS06975 2ca265385a8b05472ef0ab8eaaf5f061 765 SMART SM00849 511 699 2.9E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 174 2.7E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 Pfam PF00593 TonB dependent receptor 543 849 2.0E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 Gene3D G3DSA:2.40.170.20 177 866 3.8E-92 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 PANTHER PTHR30069 1 791 2.1E-101 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 SUPERFAMILY SSF56935 361 654 5.86E-107 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 SUPERFAMILY SSF56935 284 332 5.86E-107 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 SUPERFAMILY SSF56935 39 240 5.86E-107 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 SUPERFAMILY SSF56935 682 866 5.86E-107 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 PANTHER PTHR30069:SF7 1 791 2.1E-101 T 22-04-2016 SAMA_RS12510 f579b07ed18c92b31f50657d6a8b1072 866 Gene3D G3DSA:2.170.130.10 55 176 7.4E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS01675 720a3e7b9f15ba81d7671af8ea12ece6 234 Gene3D G3DSA:3.30.870.10 36 113 2.1E-6 T 22-04-2016 SAMA_RS01675 720a3e7b9f15ba81d7671af8ea12ece6 234 Gene3D G3DSA:3.30.870.10 145 219 2.1E-6 T 22-04-2016 SAMA_RS01675 720a3e7b9f15ba81d7671af8ea12ece6 234 SUPERFAMILY SSF56024 145 219 2.2E-5 T 22-04-2016 SAMA_RS01675 720a3e7b9f15ba81d7671af8ea12ece6 234 SUPERFAMILY SSF56024 36 108 2.2E-5 T 22-04-2016 SAMA_RS01675 720a3e7b9f15ba81d7671af8ea12ece6 234 Pfam PF13091 PLD-like domain 64 209 2.1E-6 T 22-04-2016 IPR025202 Phospholipase D-like domain SAMA_RS14495 ccd93bb8215a21ff2033f79d8d032039 438 PANTHER PTHR35334 11 438 1.3E-215 T 22-04-2016 SAMA_RS14495 ccd93bb8215a21ff2033f79d8d032039 438 PANTHER PTHR35334:SF2 11 438 1.3E-215 T 22-04-2016 SAMA_RS14495 ccd93bb8215a21ff2033f79d8d032039 438 TIGRFAM TIGR00814 stp: serine transporter 33 427 8.5E-159 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 SAMA_RS14495 ccd93bb8215a21ff2033f79d8d032039 438 Pfam PF03222 Tryptophan/tyrosine permease family 45 404 1.4E-10 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SAMA_RS03640 50aacc035398ca86b974a34039547320 117 PANTHER PTHR41336:SF1 34 114 1.3E-12 T 22-04-2016 SAMA_RS03640 50aacc035398ca86b974a34039547320 117 PANTHER PTHR41336 34 114 1.3E-12 T 22-04-2016 SAMA_RS03640 50aacc035398ca86b974a34039547320 117 Pfam PF06961 Protein of unknown function (DUF1294) 34 87 1.0E-18 T 22-04-2016 IPR010718 Protein of unknown function DUF1294 SAMA_RS09860 7e965b5429039e50e3fc967424400e31 240 PANTHER PTHR10108:SF836 68 216 7.5E-35 T 22-04-2016 SAMA_RS09860 7e965b5429039e50e3fc967424400e31 240 SUPERFAMILY SSF53335 68 203 1.3E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09860 7e965b5429039e50e3fc967424400e31 240 PANTHER PTHR10108 68 216 7.5E-35 T 22-04-2016 SAMA_RS09860 7e965b5429039e50e3fc967424400e31 240 Gene3D G3DSA:3.40.50.150 68 179 5.1E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09860 7e965b5429039e50e3fc967424400e31 240 Pfam PF08241 Methyltransferase domain 62 116 2.0E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SAMA_RS00520 38914f10dfa56f0ba3f473f33a05b589 366 SUPERFAMILY SSF53756 81 342 2.57E-12 T 22-04-2016 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 PANTHER PTHR30474 13 401 3.6E-177 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 34 389 3.6E-130 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 PANTHER PTHR30474:SF2 13 401 3.6E-177 T 22-04-2016 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 32 400 40.529 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 Pfam PF01098 Cell cycle protein 37 391 1.1E-112 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SAMA_RS01885 4b1d0661f6b4813e52b91770b744901a 402 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 348 372 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 Pfam PF02050 Flagellar FliJ protein 19 142 2.2E-33 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 144 1.8E-32 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PANTHER PTHR38786 1 147 5.8E-39 T 22-04-2016 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PIRSF PIRSF019404 1 148 4.6E-32 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 6.1E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 6.1E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 6.1E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 6.1E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS12005 fd9cac45947a82144b74cd0ca86e446a 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 6.1E-7 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 SAMA_RS00350 f112d628da45ccea741b0caaa484d2af 148 SUPERFAMILY SSF54001 25 147 5.89E-38 T 22-04-2016 SAMA_RS00350 f112d628da45ccea741b0caaa484d2af 148 Gene3D G3DSA:3.90.1720.10 30 147 1.3E-38 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS00350 f112d628da45ccea741b0caaa484d2af 148 PANTHER PTHR21666 19 146 1.4E-37 T 22-04-2016 SAMA_RS00350 f112d628da45ccea741b0caaa484d2af 148 Pfam PF00877 NlpC/P60 family 42 146 5.0E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS00350 f112d628da45ccea741b0caaa484d2af 148 PANTHER PTHR21666:SF210 19 146 1.4E-37 T 22-04-2016 SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 Gene3D G3DSA:3.30.420.10 6 180 5.5E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 SMART SM00479 7 180 1.8E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 Pfam PF00929 Exonuclease 9 170 1.6E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 PANTHER PTHR11046:SF1 2 181 6.8E-116 T 22-04-2016 SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 PANTHER PTHR11046 2 181 6.8E-116 T 22-04-2016 SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.284 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 SAMA_RS15835 fc7afb1e897e57d8fb3c0a308db67d8e 181 SUPERFAMILY SSF53098 4 180 3.59E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS15155 0482c8930af1afa06c81193e89b71465 153 PANTHER PTHR35038 33 149 3.8E-13 T 22-04-2016 SAMA_RS15155 0482c8930af1afa06c81193e89b71465 153 Gene3D G3DSA:1.10.3820.10 10 150 2.5E-16 T 22-04-2016 SAMA_RS15155 0482c8930af1afa06c81193e89b71465 153 SUPERFAMILY SSF48695 32 149 8.96E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 Pfam PF01145 SPFH domain / Band 7 family 30 195 7.5E-34 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 177 198 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 32 54 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 79 100 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 134 157 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 158 176 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 202 225 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PRINTS PR00721 Stomatin signature 114 131 9.7E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PANTHER PTHR10264 9 248 3.9E-107 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 SMART SM00244 25 182 1.3E-60 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 SUPERFAMILY SSF117892 56 189 2.22E-43 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS05340 9362f7fbe9089aa91d3bddd251d7bb9f 260 PANTHER PTHR10264:SF60 9 248 3.9E-107 T 22-04-2016 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 348 370 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 207 226 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 409 429 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 179 197 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PRINTS PR00175 Sodium/alanine symporter signature 88 110 2.1E-54 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PANTHER PTHR30330:SF1 1 472 7.3E-276 T 22-04-2016 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 440 1.3E-147 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 Pfam PF01235 Sodium:alanine symporter family 51 452 2.7E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS04785 459c6a90181a2cf4dbd56a0e93a6da3a 480 PANTHER PTHR30330 1 472 7.3E-276 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Pfam PF08245 Mur ligase middle domain 111 310 1.1E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 SUPERFAMILY SSF63418 2 99 6.41E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 PANTHER PTHR23135 25 480 2.1E-180 T 22-04-2016 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 SUPERFAMILY SSF53244 331 480 6.54E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Pfam PF01225 Mur ligase family, catalytic domain 21 99 5.9E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 414 1.2E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Gene3D G3DSA:3.40.1390.10 2 99 9.0E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 PANTHER PTHR23135:SF4 25 480 2.1E-180 T 22-04-2016 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Gene3D G3DSA:3.90.190.20 335 476 4.1E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Gene3D G3DSA:3.40.1190.10 105 334 3.9E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 SUPERFAMILY SSF53623 105 328 3.14E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 480 2.5E-148 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SAMA_RS01865 db2e2adf9fc7035347e643b5a149716f 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 483 31.572 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 PANTHER PTHR10289:SF5 4 336 2.2E-146 T 22-04-2016 SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 Pfam PF01212 Beta-eliminating lyase 4 285 2.5E-94 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 PIRSF PIRSF017617 1 336 2.7E-134 T 22-04-2016 IPR023603 Threonine aldolase SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 Gene3D G3DSA:3.40.640.10 4 243 2.7E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 PANTHER PTHR10289 4 336 2.2E-146 T 22-04-2016 SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 SUPERFAMILY SSF53383 4 334 3.99E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS12855 ae24a15559c365e9cb47d34772c82c3a 336 Gene3D G3DSA:3.90.1150.10 247 336 2.1E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 SUPERFAMILY SSF50182 118 181 2.06E-12 T 22-04-2016 IPR010920 LSM domain SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 SUPERFAMILY SSF82689 184 280 3.79E-14 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 SUPERFAMILY SSF82861 32 116 4.84E-15 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 Pfam PF05552 Conserved TM helix 26 68 6.1E-9 T 22-04-2016 IPR008910 Conserved TM helix SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 Gene3D G3DSA:3.30.70.100 189 268 9.7E-8 T 22-04-2016 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 Pfam PF00924 Mechanosensitive ion channel 76 266 4.1E-33 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 Gene3D G3DSA:2.30.30.60 133 181 9.8E-10 T 22-04-2016 SAMA_RS02205 e8b44f481ed69d787568c09dd16ea30d 282 PANTHER PTHR30221 14 279 1.6E-46 T 22-04-2016 SAMA_RS00575 194dd8ad3cf3e575d4797cc2e23be5ef 587 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 70 214 5.2E-16 T 22-04-2016 SAMA_RS00575 194dd8ad3cf3e575d4797cc2e23be5ef 587 PANTHER PTHR33908:SF3 1 555 1.7E-111 T 22-04-2016 SAMA_RS00575 194dd8ad3cf3e575d4797cc2e23be5ef 587 PANTHER PTHR33908 1 555 1.7E-111 T 22-04-2016 SAMA_RS03440 6445c1c99b95d149397e289e0d1c24ac 179 SUPERFAMILY SSF52499 1 179 2.09E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS03440 6445c1c99b95d149397e289e0d1c24ac 179 Pfam PF00857 Isochorismatase family 7 156 4.2E-30 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS03440 6445c1c99b95d149397e289e0d1c24ac 179 Gene3D G3DSA:3.40.50.850 2 179 2.2E-55 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS03440 6445c1c99b95d149397e289e0d1c24ac 179 PANTHER PTHR14119 1 179 6.1E-58 T 22-04-2016 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 PANTHER PTHR30634:SF11 37 201 1.9E-28 T 22-04-2016 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 Pfam PF03550 Outer membrane lipoprotein LolB 45 194 3.4E-37 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 38 195 2.0E-26 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 PANTHER PTHR30634 37 201 1.9E-28 T 22-04-2016 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 SUPERFAMILY SSF89392 23 195 1.65E-44 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 Gene3D G3DSA:2.50.20.10 17 195 4.0E-44 T 22-04-2016 SAMA_RS13390 893ee4ca0fc6b74a37f045b39d98e36d 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 196 20.741 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SAMA_RS13890 7dd44f8b3281afdf26b41c8647e5a084 121 SUPERFAMILY SSF51182 28 117 9.35E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS13890 7dd44f8b3281afdf26b41c8647e5a084 121 Gene3D G3DSA:2.60.120.10 21 120 3.3E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS13890 7dd44f8b3281afdf26b41c8647e5a084 121 Pfam PF05899 Protein of unknown function (DUF861) 43 115 6.1E-22 T 22-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 SAMA_RS13890 7dd44f8b3281afdf26b41c8647e5a084 121 PANTHER PTHR40943 1 120 4.1E-44 T 22-04-2016 SAMA_RS00695 11597507cd2bd765f98114c987b2466d 254 Gene3D G3DSA:3.40.50.720 7 250 2.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS00695 11597507cd2bd765f98114c987b2466d 254 SUPERFAMILY SSF69572 6 250 4.45E-86 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS00695 11597507cd2bd765f98114c987b2466d 254 PANTHER PTHR10953 6 250 9.5E-84 T 22-04-2016 SAMA_RS00695 11597507cd2bd765f98114c987b2466d 254 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 10 249 3.0E-124 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS00695 11597507cd2bd765f98114c987b2466d 254 Pfam PF00899 ThiF family 14 247 3.9E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Gene3D G3DSA:3.50.30.30 292 418 7.4E-32 T 22-04-2016 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PANTHER PTHR10795:SF356 11 316 9.6E-63 T 22-04-2016 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PANTHER PTHR10795:SF356 333 487 9.6E-63 T 22-04-2016 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Pfam PF02225 PA domain 339 405 4.6E-9 T 22-04-2016 IPR003137 PA domain SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 SUPERFAMILY SSF54897 26 87 2.15E-9 T 22-04-2016 IPR009020 Proteinase inhibitor, propeptide SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 154 164 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PANTHER PTHR10795 11 316 9.6E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PANTHER PTHR10795 333 487 9.6E-63 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Pfam PF00082 Subtilase family 403 478 1.2E-15 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Pfam PF00082 Subtilase family 114 301 1.6E-25 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 428 438 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Gene3D G3DSA:3.30.70.80 25 94 8.8E-15 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Gene3D G3DSA:3.40.50.200 422 492 4.7E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 Gene3D G3DSA:3.40.50.200 98 291 4.7E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 150 163 5.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 112 131 5.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 PRINTS PR00723 Subtilisin serine protease family (S8) signature 427 443 5.4E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SAMA_RS17260 dfe3505344b99285d03139fbac9ddc17 514 SUPERFAMILY SSF52743 94 491 1.69E-87 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS10420 d11a41859a210f9d95906e4afb37f8c5 123 PANTHER PTHR34299 1 123 2.0E-41 T 22-04-2016 SAMA_RS10420 d11a41859a210f9d95906e4afb37f8c5 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SAMA_RS10420 d11a41859a210f9d95906e4afb37f8c5 123 Gene3D G3DSA:1.10.3830.10 5 123 1.2E-46 T 22-04-2016 SAMA_RS10420 d11a41859a210f9d95906e4afb37f8c5 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 118 3.3E-36 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SAMA_RS10420 d11a41859a210f9d95906e4afb37f8c5 123 PANTHER PTHR34299:SF1 1 123 2.0E-41 T 22-04-2016 SAMA_RS14675 b1b931609c4a2d43a27a10928652713b 201 PANTHER PTHR40115 5 201 5.3E-40 T 22-04-2016 SAMA_RS14675 b1b931609c4a2d43a27a10928652713b 201 Pfam PF16357 Putative PepSY_TM-like 14 199 6.3E-44 T 22-04-2016 IPR032307 Putative PepSY TM-like protein SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 SUPERFAMILY SSF53795 200 512 2.62E-132 T 22-04-2016 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 467 1.1E-203 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 Gene3D G3DSA:3.90.228.20 322 512 4.4E-112 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 Gene3D G3DSA:3.90.228.20 200 262 4.4E-112 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 Gene3D G3DSA:3.40.449.10 7 199 7.1E-74 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 513 54.299 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 SUPERFAMILY SSF68923 4 199 2.09E-75 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 PIRSF PIRSF006294 1 513 8.7E-226 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 PANTHER PTHR30031:SF0 5 513 1.2E-292 T 22-04-2016 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 PANTHER PTHR30031 5 513 1.2E-292 T 22-04-2016 SAMA_RS00835 eec1e6f28f1d267a8239b330de754321 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 512 1.5E-199 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SAMA_RS00455 6c93fab04a3c0a27e82389fbe249fd46 226 Gene3D G3DSA:3.40.50.150 119 204 3.7E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS00455 6c93fab04a3c0a27e82389fbe249fd46 226 Pfam PF13489 Methyltransferase domain 101 199 1.4E-12 T 22-04-2016 SAMA_RS00455 6c93fab04a3c0a27e82389fbe249fd46 226 SUPERFAMILY SSF53335 113 202 1.91E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS10510 a86323646198966451f615fadf2b647c 592 PANTHER PTHR11814:SF55 12 547 2.6E-150 T 22-04-2016 SAMA_RS10510 a86323646198966451f615fadf2b647c 592 Gene3D G3DSA:3.30.750.24 453 533 1.7E-7 T 22-04-2016 IPR002645 STAS domain SAMA_RS10510 a86323646198966451f615fadf2b647c 592 Pfam PF01740 STAS domain 452 534 3.6E-11 T 22-04-2016 IPR002645 STAS domain SAMA_RS10510 a86323646198966451f615fadf2b647c 592 Pfam PF00916 Sulfate permease family 30 395 2.6E-83 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SAMA_RS10510 a86323646198966451f615fadf2b647c 592 PANTHER PTHR11814 12 547 2.6E-150 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SAMA_RS10510 a86323646198966451f615fadf2b647c 592 SUPERFAMILY SSF52091 453 540 3.14E-8 T 22-04-2016 IPR002645 STAS domain SAMA_RS13495 65e9b273c8b4ff0802545e19a640cbb0 164 PANTHER PTHR38098:SF1 1 161 1.1E-52 T 22-04-2016 SAMA_RS13495 65e9b273c8b4ff0802545e19a640cbb0 164 Pfam PF04390 Lipopolysaccharide-assembly 12 157 1.8E-19 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SAMA_RS13495 65e9b273c8b4ff0802545e19a640cbb0 164 Gene3D G3DSA:3.30.160.150 21 161 1.6E-51 T 22-04-2016 SAMA_RS13495 65e9b273c8b4ff0802545e19a640cbb0 164 PANTHER PTHR38098 1 161 1.1E-52 T 22-04-2016 SAMA_RS13495 65e9b273c8b4ff0802545e19a640cbb0 164 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 163 24.155 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 SMART SM00244 33 202 0.0032 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 PANTHER PTHR13806:SF2 1 415 1.2E-189 T 22-04-2016 SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 PANTHER PTHR13806:SF2 441 549 1.2E-189 T 22-04-2016 SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 Pfam PF15975 Flotillin 420 541 7.8E-37 T 22-04-2016 IPR031905 Flotillin, C-terminal domain SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 SUPERFAMILY SSF117892 64 214 9.02E-23 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 PANTHER PTHR13806 1 415 1.2E-189 T 22-04-2016 IPR027705 Flotillin family SAMA_RS04215 08813020ee3d25b81243c176a0c85ff0 585 PANTHER PTHR13806 441 549 1.2E-189 T 22-04-2016 IPR027705 Flotillin family SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 SUPERFAMILY SSF53850 90 299 1.72E-36 T 22-04-2016 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Gene3D G3DSA:3.40.190.10 176 271 5.3E-20 T 22-04-2016 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Gene3D G3DSA:1.10.10.10 1 86 7.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 SUPERFAMILY SSF46785 2 85 3.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Pfam PF03466 LysR substrate binding domain 95 298 2.1E-21 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 PANTHER PTHR30118 1 299 7.6E-98 T 22-04-2016 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 PANTHER PTHR30118:SF4 1 299 7.6E-98 T 22-04-2016 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Gene3D G3DSA:3.40.190.10 275 301 3.0E-23 T 22-04-2016 SAMA_RS13150 b63ba6af8228c9adf84280119e6090ad 302 Gene3D G3DSA:3.40.190.10 90 175 3.0E-23 T 22-04-2016 SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 Gene3D G3DSA:2.60.40.10 373 454 5.7E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 Gene3D G3DSA:3.40.390.10 149 204 3.6E-6 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 SUPERFAMILY SSF55486 50 190 2.01E-13 T 22-04-2016 SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 377 449 3.7E-6 T 22-04-2016 IPR018905 Alpha-galactosidase, NEW3 domain SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 Gene3D G3DSA:3.40.390.10 63 148 2.6E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS07375 3858b4596abf417cb1649ce958de01ee 582 Pfam PF05548 Gametolysin peptidase M11 99 219 2.8E-5 T 22-04-2016 IPR008752 Peptidase M11, gametolysin SAMA_RS11910 d1c2add01436cc4816ab8128f71aceb8 263 SUPERFAMILY SSF52540 3 254 1.92E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11910 d1c2add01436cc4816ab8128f71aceb8 263 PANTHER PTHR13696 3 263 6.0E-148 T 22-04-2016 SAMA_RS11910 d1c2add01436cc4816ab8128f71aceb8 263 Gene3D G3DSA:3.40.50.300 2 252 2.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11910 d1c2add01436cc4816ab8128f71aceb8 263 PANTHER PTHR13696:SF69 3 263 6.0E-148 T 22-04-2016 SAMA_RS11910 d1c2add01436cc4816ab8128f71aceb8 263 Pfam PF13614 AAA domain 3 179 2.5E-47 T 22-04-2016 IPR025669 AAA domain SAMA_RS08585 380331f756752c59a9446db34d9dc5f7 137 Gene3D G3DSA:3.40.190.10 23 135 6.6E-13 T 22-04-2016 SAMA_RS08585 380331f756752c59a9446db34d9dc5f7 137 Pfam PF12849 PBP superfamily domain 20 128 1.1E-6 T 22-04-2016 IPR024370 PBP domain SAMA_RS08585 380331f756752c59a9446db34d9dc5f7 137 SUPERFAMILY SSF53850 7 134 4.07E-20 T 22-04-2016 SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 Gene3D G3DSA:3.30.160.60 75 110 4.9E-12 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 PANTHER PTHR30518:SF2 3 336 8.0E-91 T 22-04-2016 SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 Gene3D G3DSA:3.30.160.60 303 336 1.1E-17 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 Pfam PF02618 YceG-like family 47 329 2.9E-81 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 PANTHER PTHR30518 3 336 8.0E-91 T 22-04-2016 SAMA_RS10660 d5a5e0984e5f80d0708b753d79e7eafb 336 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 333 4.5E-90 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 1.3E-56 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 PANTHER PTHR11941 3 254 4.8E-169 T 22-04-2016 SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 Gene3D G3DSA:3.90.226.10 7 198 1.4E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 PANTHER PTHR11941:SF89 3 254 4.8E-169 T 22-04-2016 SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 Gene3D G3DSA:1.10.12.10 199 257 5.4E-21 T 22-04-2016 IPR014748 Crontonase, C-terminal SAMA_RS07185 e748adf7bd1b898711f2f96ed4f3d0b2 257 SUPERFAMILY SSF52096 3 256 2.3E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 Pfam PF07971 Glycosyl hydrolase family 92 332 826 8.5E-141 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 SUPERFAMILY SSF48208 351 783 1.28E-17 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 Gene3D G3DSA:1.20.1610.10 546 700 1.1E-36 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 Gene3D G3DSA:3.30.2080.10 701 837 1.3E-39 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143 314 464 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143 481 529 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143 39 296 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143 549 845 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143:SF22 314 464 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143:SF22 481 529 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143:SF22 39 296 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 PANTHER PTHR12143:SF22 549 845 3.0E-90 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 Gene3D G3DSA:1.20.1050.60 440 529 2.5E-23 T 22-04-2016 SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 56 830 2.4E-125 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SAMA_RS03000 7e4376e3ecd35e835606fb257c40fb2e 849 Gene3D G3DSA:2.70.98.10 59 414 1.8E-79 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 SUPERFAMILY SSF56784 1 244 1.36E-58 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 Pfam PF13344 Haloacid dehalogenase-like hydrolase 4 103 6.7E-21 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 Pfam PF13242 HAD-hyrolase-like 172 240 7.2E-20 T 22-04-2016 SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 PANTHER PTHR19288 1 245 3.7E-162 T 22-04-2016 SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 Gene3D G3DSA:3.40.50.1000 172 245 1.0E-35 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 Gene3D G3DSA:3.40.50.1000 1 77 1.0E-35 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 PANTHER PTHR19288:SF40 1 245 3.7E-162 T 22-04-2016 SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 Gene3D G3DSA:3.40.50.10410 81 171 1.2E-30 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain SAMA_RS10975 fd7a2cac5f14b276a0cb867f6968a517 248 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 4 221 3.2E-56 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SAMA_RS17480 295f83ecc2b04050c5e37cf384a287a5 290 PANTHER PTHR22911 2 289 6.8E-87 T 22-04-2016 SAMA_RS17480 295f83ecc2b04050c5e37cf384a287a5 290 SUPERFAMILY SSF103481 178 268 2.22E-9 T 22-04-2016 SAMA_RS17480 295f83ecc2b04050c5e37cf384a287a5 290 Pfam PF00892 EamA-like transporter family 7 136 2.8E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS17480 295f83ecc2b04050c5e37cf384a287a5 290 PANTHER PTHR22911:SF70 2 289 6.8E-87 T 22-04-2016 SAMA_RS17480 295f83ecc2b04050c5e37cf384a287a5 290 SUPERFAMILY SSF103481 42 138 5.89E-14 T 22-04-2016 SAMA_RS15060 0574e96b3aaa930140c6eae4cd42eacd 64 Pfam PF11661 Protein of unknown function (DUF2986) 1 42 3.0E-19 T 22-04-2016 IPR021677 Protein of unknown function DUF2986 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 Pfam PF02581 Thiamine monophosphate synthase/TENI 331 502 9.9E-46 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 PANTHER PTHR20858 1 285 3.9E-77 T 22-04-2016 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 314 520 20.028 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 PANTHER PTHR20858:SF17 1 285 3.9E-77 T 22-04-2016 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 Gene3D G3DSA:3.40.1190.20 11 287 2.3E-81 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 Pfam PF08543 Phosphomethylpyrimidine kinase 20 285 8.3E-61 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 Gene3D G3DSA:3.20.20.70 316 520 1.8E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 SUPERFAMILY SSF53613 10 287 7.36E-58 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS09735 2ce2d8d3a0afc01621655cdbf3bf59d6 525 SUPERFAMILY SSF51391 315 520 3.27E-56 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 299 322 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 Gene3D G3DSA:1.10.3860.10 9 408 3.0E-143 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PANTHER PTHR11958:SF59 9 429 8.4E-216 T 22-04-2016 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 83 108 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 16 36 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 6.3E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 SUPERFAMILY SSF118215 18 405 8.89E-131 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 Pfam PF00375 Sodium:dicarboxylate symporter family 18 403 3.7E-141 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS14475 2da8fba7bd8166a9c424e85f5093652f 430 PANTHER PTHR11958 9 429 8.4E-216 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 Pfam PF00561 alpha/beta hydrolase fold 57 300 6.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 PIRSF PIRSF005211 1 325 1.4E-107 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 SUPERFAMILY SSF53474 5 319 3.84E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 PANTHER PTHR10794 1 321 7.5E-77 T 22-04-2016 SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 225 266 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SAMA_RS15650 3189adbe6c113392732ff27eca05a493 325 Gene3D G3DSA:3.40.50.1820 40 319 1.0E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS18350 3dde973777e5baaa3478e7f97321e18c 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 217 7.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS18350 3dde973777e5baaa3478e7f97321e18c 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 7 216 1.3E-73 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SAMA_RS18350 3dde973777e5baaa3478e7f97321e18c 225 Gene3D G3DSA:1.10.3720.10 3 218 9.7E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS18350 3dde973777e5baaa3478e7f97321e18c 225 SUPERFAMILY SSF161098 3 210 1.19E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS18350 3dde973777e5baaa3478e7f97321e18c 225 PANTHER PTHR30183 1 217 1.3E-61 T 22-04-2016 SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 Pfam PF00850 Histone deacetylase domain 25 283 1.6E-46 T 22-04-2016 IPR023801 Histone deacetylase domain SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 7.6E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 7.6E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 7.6E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 Gene3D G3DSA:3.40.800.20 2 281 6.1E-61 T 22-04-2016 IPR023801 Histone deacetylase domain SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 SUPERFAMILY SSF52768 3 285 1.77E-78 T 22-04-2016 SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 PANTHER PTHR10625 1 286 3.0E-114 T 22-04-2016 IPR000286 Histone deacetylase superfamily SAMA_RS06525 147a0253ead3c5286fe5d31ec51ddb5f 305 PANTHER PTHR10625:SF131 1 286 3.0E-114 T 22-04-2016 SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 PIRSF PIRSF006230 1 278 5.2E-102 T 22-04-2016 IPR016478 GTPase, MTG1 SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 PANTHER PTHR11089 2 309 9.8E-77 T 22-04-2016 SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 SUPERFAMILY SSF52540 9 242 6.09E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 118 138 8.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 179 8.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 Gene3D G3DSA:1.10.1580.10 176 267 9.2E-35 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 Gene3D G3DSA:3.40.50.300 16 172 1.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 273 2.3E-104 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis SAMA_RS10405 26bd824e62e4b20d6c044141acbf7b27 314 Pfam PF01926 50S ribosome-binding GTPase 118 186 3.4E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 SUPERFAMILY SSF55326 11 161 9.16E-40 T 22-04-2016 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 341 1.6E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 159 5.8E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 PANTHER PTHR10256 2 340 5.3E-146 T 22-04-2016 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 Hamap MF_00625 Selenide, water dikinase [selD]. 8 349 44.813 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 PIRSF PIRSF036407 3 344 9.3E-118 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 Gene3D G3DSA:3.90.650.10 170 343 1.3E-16 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 TIGRFAM TIGR00476 selD: selenide, water dikinase 10 315 1.1E-136 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 SUPERFAMILY SSF56042 168 344 9.72E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SAMA_RS00960 b28d01e060a0489a79995f547cd072d9 352 Gene3D G3DSA:3.30.1330.10 32 163 6.5E-30 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 Gene3D G3DSA:3.30.450.20 170 308 1.6E-5 T 22-04-2016 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 SUPERFAMILY SSF58104 363 660 7.59E-67 T 22-04-2016 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 Gene3D G3DSA:1.10.287.950 412 628 5.2E-50 T 22-04-2016 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 Pfam PF02743 Cache domain 33 292 3.6E-18 T 22-04-2016 IPR033479 Double Cache domain 1 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 SMART SM00283 398 659 5.5E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 PANTHER PTHR32089:SF64 287 660 4.3E-98 T 22-04-2016 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 PANTHER PTHR32089 287 660 4.3E-98 T 22-04-2016 SAMA_RS00140 6d903dee0d009a9288366b0d3eed0bc3 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 658 6.4E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS16215 ee85ec2b5047b39f88ffcda66724ef01 246 SUPERFAMILY SSF47413 7 74 2.11E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS16215 ee85ec2b5047b39f88ffcda66724ef01 246 Gene3D G3DSA:1.10.260.40 4 67 7.0E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS16215 ee85ec2b5047b39f88ffcda66724ef01 246 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 71 2.0E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS16215 ee85ec2b5047b39f88ffcda66724ef01 246 SMART SM00530 10 65 2.0E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 Pfam PF11871 Domain of unknown function (DUF3391) 8 123 3.7E-17 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 TIGRFAM TIGR00277 HDIG: HDIG domain 158 251 4.9E-11 T 22-04-2016 IPR006675 HDIG domain SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 SMART SM00471 156 292 0.0084 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 SUPERFAMILY SSF109604 150 319 2.03E-25 T 22-04-2016 SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 Pfam PF01966 HD domain 162 280 5.1E-16 T 22-04-2016 IPR006674 HD domain SAMA_RS07900 b46bd2d334cd3d88a170a55a1f7dd540 404 Gene3D G3DSA:1.10.3210.10 159 283 5.2E-20 T 22-04-2016 IPR006674 HD domain SAMA_RS01695 3b6995a92abed8b40aca62b334e60db8 197 SUPERFAMILY SSF143081 2 185 1.57E-43 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01695 3b6995a92abed8b40aca62b334e60db8 197 PANTHER PTHR13604 55 171 1.0E-22 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01695 3b6995a92abed8b40aca62b334e60db8 197 Pfam PF02586 SOS response associated peptidase (SRAP) 1 186 1.7E-31 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS01695 3b6995a92abed8b40aca62b334e60db8 197 Gene3D G3DSA:3.90.1680.10 1 180 7.6E-39 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS11170 32f81b51442577f4c703400dfd994826 99 Pfam PF03795 YCII-related domain 1 95 5.6E-28 T 22-04-2016 IPR005545 YCII-related SAMA_RS11170 32f81b51442577f4c703400dfd994826 99 Gene3D G3DSA:3.30.70.1060 1 97 3.2E-35 T 22-04-2016 SAMA_RS11170 32f81b51442577f4c703400dfd994826 99 SUPERFAMILY SSF54909 1 97 3.75E-30 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS11170 32f81b51442577f4c703400dfd994826 99 PANTHER PTHR33606 1 98 8.6E-32 T 22-04-2016 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.703 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 PANTHER PTHR14413 1 119 9.3E-69 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 Gene3D G3DSA:3.90.1030.10 1 116 2.3E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 1.4E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01250 d44acfaebf9d88a420bc58ee8cae10ec 131 SUPERFAMILY SSF64263 1 119 6.93E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS09775 b8eb2e71a5a1faa97788490753b478f4 123 PANTHER PTHR10815 18 114 2.3E-37 T 22-04-2016 SAMA_RS09775 b8eb2e71a5a1faa97788490753b478f4 123 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 18 96 3.2E-20 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SAMA_RS09775 b8eb2e71a5a1faa97788490753b478f4 123 SUPERFAMILY SSF46767 18 97 2.62E-21 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SAMA_RS09775 b8eb2e71a5a1faa97788490753b478f4 123 Gene3D G3DSA:1.10.10.10 17 100 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09775 b8eb2e71a5a1faa97788490753b478f4 123 PANTHER PTHR10815:SF2 18 114 2.3E-37 T 22-04-2016 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 25.322 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 PANTHER PTHR33317 3 135 4.6E-45 T 22-04-2016 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 Pfam PF03652 Holliday junction resolvase 3 134 7.5E-40 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 134 3.9E-51 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 SUPERFAMILY SSF53098 2 135 2.12E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 Gene3D G3DSA:3.30.420.140 2 136 1.5E-44 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SAMA_RS12910 1d7c733c4946e14adfa6874538699170 139 SMART SM00732 2 102 1.0E-36 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SAMA_RS17540 4208a6ca53ad2616ff69a286b8f26fbb 172 Pfam PF04351 Pilus assembly protein, PilP 23 169 1.1E-49 T 22-04-2016 IPR007446 Pilus assembly protein PilP SAMA_RS17540 4208a6ca53ad2616ff69a286b8f26fbb 172 PIRSF PIRSF016481 1 172 3.5E-45 T 22-04-2016 IPR007446 Pilus assembly protein PilP SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 PANTHER PTHR11751:SF398 50 362 8.8E-73 T 22-04-2016 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 Gene3D G3DSA:3.40.640.10 54 266 1.9E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 219 228 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 17 360 50.792 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 SUPERFAMILY SSF53383 32 359 1.55E-66 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 19 358 1.0E-89 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 PANTHER PTHR11751 50 362 8.8E-73 T 22-04-2016 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 Pfam PF00155 Aminotransferase class I and II 56 356 2.5E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SAMA_RS10160 6d81260c969e2a32e733cd2270c9fef0 362 Gene3D G3DSA:3.90.1150.10 271 359 4.9E-9 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS10920 a7e4e5c3ff81446e57ac77a1b8b3ff71 145 PANTHER PTHR30558:SF7 4 145 3.7E-59 T 22-04-2016 SAMA_RS10920 a7e4e5c3ff81446e57ac77a1b8b3ff71 145 TIGRFAM TIGR02801 tolR: protein TolR 12 140 7.0E-42 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 SAMA_RS10920 a7e4e5c3ff81446e57ac77a1b8b3ff71 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 140 1.5E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SAMA_RS10920 a7e4e5c3ff81446e57ac77a1b8b3ff71 145 PANTHER PTHR30558 4 145 3.7E-59 T 22-04-2016 SAMA_RS14380 2d13ba14018d99c0437b4566052bf59a 251 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 94 3.9E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14380 2d13ba14018d99c0437b4566052bf59a 251 SUPERFAMILY SSF46894 3 94 5.67E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS14380 2d13ba14018d99c0437b4566052bf59a 251 SMART SM00862 21 94 1.0E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS14380 2d13ba14018d99c0437b4566052bf59a 251 Gene3D G3DSA:1.10.10.10 3 95 1.0E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02445 377d414a4e6a58da1f03f2bf013db517 300 SUPERFAMILY SSF52540 5 256 8.47E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02445 377d414a4e6a58da1f03f2bf013db517 300 Pfam PF13401 AAA domain 42 171 1.1E-25 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS02445 377d414a4e6a58da1f03f2bf013db517 300 PANTHER PTHR35894 2 277 2.9E-102 T 22-04-2016 SAMA_RS02445 377d414a4e6a58da1f03f2bf013db517 300 PANTHER PTHR35894:SF1 2 277 2.9E-102 T 22-04-2016 SAMA_RS02445 377d414a4e6a58da1f03f2bf013db517 300 Gene3D G3DSA:3.40.50.300 28 184 5.2E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03150 40673ed2d6df0da70ce7187f8caff065 1226 Pfam PF12128 Protein of unknown function (DUF3584) 8 1198 0.0 T 22-04-2016 IPR021979 Protein of unknown function DUF3584 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 SUPERFAMILY SSF63737 9 205 4.84E-39 T 22-04-2016 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PANTHER PTHR11533 13 593 1.8E-136 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 SUPERFAMILY SSF55486 215 450 2.2E-64 T 22-04-2016 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 Pfam PF01433 Peptidase family M1 22 381 3.1E-57 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 SMART SM01263 460 595 1.3E-41 T 22-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PANTHER PTHR11533:SF174 13 593 1.8E-136 T 22-04-2016 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 5.9E-16 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 144 159 5.9E-16 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 290 305 5.9E-16 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 309 321 5.9E-16 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 189 204 5.9E-16 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 Gene3D G3DSA:1.10.390.10 303 451 4.3E-32 T 22-04-2016 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 477 594 2.9E-25 T 22-04-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6|UniPathway: UPA00878 SAMA_RS05650 3ffa930c7cec20a48ce4ceea825e0ed2 598 SUPERFAMILY SSF48371 472 595 1.09E-33 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 Gene3D G3DSA:3.30.1360.40 79 152 2.7E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 Pfam PF01316 Arginine repressor, DNA binding domain 4 72 7.3E-23 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 151 3.0E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 TIGRFAM TIGR01529 argR_whole: arginine repressor 8 149 1.3E-43 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PRINTS PR01467 Bacterial arginine repressor signature 23 36 2.0E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PRINTS PR01467 Bacterial arginine repressor signature 119 134 2.0E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PRINTS PR01467 Bacterial arginine repressor signature 88 101 2.0E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PRINTS PR01467 Bacterial arginine repressor signature 40 55 2.0E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 Gene3D G3DSA:1.10.10.10 2 75 2.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 Pfam PF02863 Arginine repressor, C-terminal domain 80 147 8.1E-24 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 Hamap MF_00173 Arginine repressor [argR]. 1 153 61.831 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PANTHER PTHR34471 1 154 8.1E-65 T 22-04-2016 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 SUPERFAMILY SSF46785 3 74 1.14E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 SUPERFAMILY SSF55252 80 148 7.98E-21 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SAMA_RS03545 dc106ba3c5abbfe5af259749c7c640e1 154 PANTHER PTHR34471:SF1 1 154 8.1E-65 T 22-04-2016 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 Pfam PF00672 HAMP domain 272 339 9.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 SMART SM00283 358 619 2.2E-73 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 PANTHER PTHR32089 237 621 2.9E-128 T 22-04-2016 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 Gene3D G3DSA:1.10.287.950 373 589 1.3E-57 T 22-04-2016 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 618 2.5E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 SMART SM00304 290 343 3.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 6.2E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 401 6.2E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 SMART SM01358 26 268 3.5E-40 T 22-04-2016 IPR032255 Helical bimodular sensor domain SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 PANTHER PTHR32089:SF34 237 621 2.9E-128 T 22-04-2016 SAMA_RS13675 f9f7136a73cec8b7c7c347c083bccadd 621 SUPERFAMILY SSF58104 311 620 1.96E-76 T 22-04-2016 SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 PANTHER PTHR31793:SF9 12 139 1.6E-27 T 22-04-2016 SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 Gene3D G3DSA:3.10.129.10 8 136 6.2E-27 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 SUPERFAMILY SSF54637 7 137 9.33E-25 T 22-04-2016 IPR029069 HotDog domain SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 PANTHER PTHR31793 12 139 1.6E-27 T 22-04-2016 SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 17 34 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SAMA_RS05255 7ea9483361ccc27f89f94c9515e5c9f8 140 PIRSF PIRSF003230 2 140 1.8E-36 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 PANTHER PTHR26402:SF597 4 210 4.8E-29 T 22-04-2016 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 210 9.7E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 PANTHER PTHR26402 4 210 4.8E-29 T 22-04-2016 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 Gene3D G3DSA:1.10.10.10 150 213 2.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 SUPERFAMILY SSF46894 148 213 3.74E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS15390 63fb262c685fd6fe4b8b972acdd144c1 221 SMART SM00421 153 210 6.1E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SAMA_RS00035 b0fd69c6f2306164048151d517b2c14e 368 PANTHER PTHR22893 15 331 2.3E-87 T 22-04-2016 SAMA_RS00035 b0fd69c6f2306164048151d517b2c14e 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 330 4.5E-55 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SAMA_RS00035 b0fd69c6f2306164048151d517b2c14e 368 Gene3D G3DSA:3.20.20.70 14 331 1.7E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS00035 b0fd69c6f2306164048151d517b2c14e 368 SUPERFAMILY SSF51395 5 334 5.8E-86 T 22-04-2016 SAMA_RS04270 93f5ebf86ffaca9de51feed578d98593 264 PANTHER PTHR33973 1 262 1.1E-43 T 22-04-2016 SAMA_RS04270 93f5ebf86ffaca9de51feed578d98593 264 Pfam PF07103 Protein of unknown function (DUF1365) 5 260 7.9E-57 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 Hamap MF_00165 Thymidylate kinase [tmk]. 7 208 27.503 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 PANTHER PTHR10344 6 202 2.1E-65 T 22-04-2016 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 ProSitePatterns PS01331 Thymidylate kinase signature. 98 110 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 Pfam PF02223 Thymidylate kinase 11 200 1.3E-48 T 22-04-2016 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 Gene3D G3DSA:3.40.50.300 6 205 5.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 6 200 5.7E-55 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SAMA_RS10655 ef8c308fc0c6d174bc8c930d190a15ad 208 SUPERFAMILY SSF52540 4 205 8.47E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 PANTHER PTHR13734 4 298 6.0E-75 T 22-04-2016 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Gene3D G3DSA:3.30.460.10 2 121 2.5E-30 T 22-04-2016 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 SUPERFAMILY SSF81891 120 361 1.83E-55 T 22-04-2016 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.691 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 SUPERFAMILY SSF81301 2 119 6.1E-30 T 22-04-2016 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Pfam PF01966 HD domain 231 326 6.4E-9 T 22-04-2016 IPR006674 HD domain SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 PIRSF PIRSF000813 1 408 1.7E-190 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Gene3D G3DSA:1.10.3090.10 122 360 3.4E-55 T 22-04-2016 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Pfam PF01743 Poly A polymerase head domain 3 122 8.8E-19 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SAMA_RS04370 912647253b733a3eedf7d3d65a11cb4f 423 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 52.172 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 Pfam PF01553 Acyltransferase 286 426 8.7E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PIRSF PIRSF000437 19 807 2.2E-285 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 805 27.218 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 SUPERFAMILY SSF69593 250 490 1.44E-24 T 22-04-2016 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PIRSF PIRSF500064 2 807 2.7E-301 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 SMART SM00563 303 430 5.0E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 12 797 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PANTHER PTHR12563 147 775 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 SAMA_RS18100 21fab36d027cbdbe7848bba79c32a244 807 PANTHER PTHR12563:SF14 147 775 0.0 T 22-04-2016 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 PANTHER PTHR11079 4 160 1.0E-51 T 22-04-2016 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 PANTHER PTHR11079:SF72 4 160 1.0E-51 T 22-04-2016 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 Gene3D G3DSA:3.40.140.10 3 152 1.2E-60 T 22-04-2016 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 SUPERFAMILY SSF53927 5 158 1.67E-57 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 154 47.579 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SAMA_RS12310 f16434611acd4178eee3177e78971778 172 Pfam PF14437 MafB19-like deaminase 10 154 1.3E-29 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 Pfam PF00890 FAD binding domain 45 480 9.6E-57 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 Gene3D G3DSA:3.90.700.10 310 438 2.9E-23 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 Gene3D G3DSA:3.50.50.60 31 294 1.6E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 Gene3D G3DSA:3.50.50.60 443 504 1.6E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 SUPERFAMILY SSF56425 300 447 4.4E-26 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 45 500 3.6E-101 T 22-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 SUPERFAMILY SSF51905 37 165 2.92E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 SUPERFAMILY SSF51905 199 311 2.92E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 SUPERFAMILY SSF51905 446 504 2.92E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 67 8.1E-6 T 22-04-2016 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 464 479 8.1E-6 T 22-04-2016 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PANTHER PTHR11632:SF6 17 504 1.6E-71 T 22-04-2016 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PANTHER PTHR11632 17 504 1.6E-71 T 22-04-2016 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 46 65 3.0E-5 T 22-04-2016 SAMA_RS12550 1c442e6b7ca7116e6d8a49fe49500389 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 452 474 3.0E-5 T 22-04-2016 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 Pfam PF00849 RNA pseudouridylate synthase 23 167 1.3E-16 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 58 72 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 PANTHER PTHR21600:SF23 141 208 5.7E-88 T 22-04-2016 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 PANTHER PTHR21600:SF23 21 124 5.7E-88 T 22-04-2016 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 27 197 1.9E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 SUPERFAMILY SSF55120 23 209 2.24E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 PANTHER PTHR21600 141 208 5.7E-88 T 22-04-2016 SAMA_RS10740 17553dd8b1a46099df4065ad2f4b4d71 212 PANTHER PTHR21600 21 124 5.7E-88 T 22-04-2016 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PIRSF PIRSF038928 1 488 2.4E-230 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 Pfam PF06628 Catalase-related immune-responsive 429 488 2.3E-22 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 122 140 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 287 314 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 319 345 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 82 100 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 103 120 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PRINTS PR00067 Catalase signature 19 42 7.1E-69 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 SUPERFAMILY SSF56634 3 488 7.46E-197 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 Pfam PF00199 Catalase 6 372 1.2E-183 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 PANTHER PTHR11465 4 488 7.3E-276 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 Gene3D G3DSA:2.40.180.10 3 356 1.6E-176 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS15355 33bcbc23948362a90b53058952876e4f 488 SMART SM01060 6 404 3.3E-272 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SAMA_RS14455 072d55b61d340544da6f6788a0984854 325 Gene3D G3DSA:3.30.70.270 170 307 3.1E-4 T 22-04-2016 SAMA_RS14455 072d55b61d340544da6f6788a0984854 325 SUPERFAMILY SSF55073 174 308 1.73E-5 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS14580 368067d2ea5e885ed708521af96b38e1 142 Gene3D G3DSA:3.10.180.10 3 125 9.5E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS14580 368067d2ea5e885ed708521af96b38e1 142 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 113 1.4E-11 T 22-04-2016 SAMA_RS14580 368067d2ea5e885ed708521af96b38e1 142 SUPERFAMILY SSF54593 2 127 7.65E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 Pfam PF12019 Type II transport protein GspH 46 152 5.6E-15 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 Gene3D G3DSA:3.30.700.10 8 48 4.2E-4 T 22-04-2016 SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 2.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04870 fc9224cfcd6ebc4082089cc9f6aa343f 163 SUPERFAMILY SSF54523 8 138 6.2E-17 T 22-04-2016 SAMA_RS11800 3a5be8cde1c73af9595cd2ab8c6747c8 209 Gene3D G3DSA:3.40.50.10320 5 208 5.8E-32 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SAMA_RS11800 3a5be8cde1c73af9595cd2ab8c6747c8 209 SUPERFAMILY SSF102588 5 208 4.32E-27 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SAMA_RS11800 3a5be8cde1c73af9595cd2ab8c6747c8 209 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 127 2.9E-14 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SAMA_RS13905 570c2cc07a2e7e1f86bf134ca8968b08 114 Pfam PF12321 Protein of unknown function (DUF3634) 8 111 8.5E-39 T 22-04-2016 IPR022090 Protein of unknown function DUF3634 SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 PANTHER PTHR37483 5 110 1.9E-41 T 22-04-2016 SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 PANTHER PTHR37483:SF1 5 110 1.9E-41 T 22-04-2016 SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 Pfam PF03658 RnfH family Ubiquitin 10 90 2.0E-30 T 22-04-2016 IPR005346 RnfH protein SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 Gene3D G3DSA:3.10.20.280 4 92 3.0E-31 T 22-04-2016 IPR005346 RnfH protein SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 22.818 T 22-04-2016 IPR005346 RnfH protein SAMA_RS12475 d6cee629f93bb44491d1f876d6441602 112 SUPERFAMILY SSF54285 8 82 1.01E-22 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 Pfam PF00072 Response regulator receiver domain 6 110 1.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 SMART SM00471 158 295 2.7E-12 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 SMART SM00448 4 116 4.2E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 Gene3D G3DSA:1.10.3210.10 148 328 1.2E-26 T 22-04-2016 IPR006674 HD domain SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 Pfam PF01966 HD domain 165 285 1.1E-21 T 22-04-2016 IPR006674 HD domain SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 Gene3D G3DSA:3.40.50.2300 2 126 2.3E-40 T 22-04-2016 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 PANTHER PTHR26402:SF495 251 308 4.2E-74 T 22-04-2016 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 PANTHER PTHR26402:SF495 4 136 4.2E-74 T 22-04-2016 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 SUPERFAMILY SSF109604 138 326 1.26E-44 T 22-04-2016 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 SUPERFAMILY SSF52172 1 138 1.99E-38 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 PANTHER PTHR26402 251 308 4.2E-74 T 22-04-2016 SAMA_RS15405 c9036344c2ff54e63dc5279f94e3d86f 340 PANTHER PTHR26402 4 136 4.2E-74 T 22-04-2016 SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 Gene3D G3DSA:3.30.420.10 38 213 2.1E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 SUPERFAMILY SSF53098 36 212 1.12E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 PANTHER PTHR30231:SF11 1 224 1.4E-62 T 22-04-2016 SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 SMART SM00479 42 215 1.5E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 PANTHER PTHR30231 1 224 1.4E-62 T 22-04-2016 SAMA_RS07930 194878ee99aa8d00d3c25317230f94dd 228 Pfam PF00929 Exonuclease 45 206 4.1E-16 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 8.8E-25 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 SUPERFAMILY SSF55083 1 155 1.15E-44 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.2E-28 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 Gene3D G3DSA:3.30.70.560 3 151 6.4E-43 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 PANTHER PTHR20941:SF12 1 163 1.7E-61 T 22-04-2016 SAMA_RS04350 e1e788bfacf429489a1171ed4aaa0a9a 167 PANTHER PTHR20941 1 163 1.7E-61 T 22-04-2016 SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 493 7.7E-183 T 22-04-2016 IPR004482 Mg chelatase-related protein SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 PANTHER PTHR32039:SF7 1 502 1.5E-247 T 22-04-2016 IPR004482 Mg chelatase-related protein SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 493 1.3E-25 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 SMART SM00382 212 391 3.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 SUPERFAMILY SSF54211 10 169 2.58E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 391 2.1E-87 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.9E-45 T 22-04-2016 SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 PANTHER PTHR32039 1 502 1.5E-247 T 22-04-2016 SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 Gene3D G3DSA:3.30.230.10 5 150 1.7E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 SUPERFAMILY SSF52540 193 499 2.83E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17130 314aa7f57d2736a485aca36c4a551496 508 Gene3D G3DSA:3.40.50.300 193 388 2.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00445 f11d9751f811185251c31d94231b89aa 155 Pfam PF10675 Protein of unknown function (DUF2489) 13 146 2.5E-45 T 22-04-2016 IPR019617 Domain of unknown function DUF2489 SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 SMART SM00382 33 249 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 SUPERFAMILY SSF52540 7 236 4.48E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 Gene3D G3DSA:3.40.50.300 4 237 2.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 Pfam PF00005 ABC transporter 25 173 1.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 PANTHER PTHR24220 10 265 2.0E-180 T 22-04-2016 SAMA_RS16075 220ca25f64b211e3ff00d7a22b46de91 270 PANTHER PTHR24220:SF368 10 265 2.0E-180 T 22-04-2016 SAMA_RS00735 ae13bf4816d52d40ff86918aaaae2515 106 Pfam PF01541 GIY-YIG catalytic domain 5 76 7.2E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SAMA_RS00735 ae13bf4816d52d40ff86918aaaae2515 106 PANTHER PTHR34477:SF1 1 83 2.0E-30 T 22-04-2016 SAMA_RS00735 ae13bf4816d52d40ff86918aaaae2515 106 SUPERFAMILY SSF82771 5 76 7.59E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SAMA_RS00735 ae13bf4816d52d40ff86918aaaae2515 106 PANTHER PTHR34477 1 83 2.0E-30 T 22-04-2016 SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 Gene3D G3DSA:3.40.190.10 100 216 1.2E-5 T 22-04-2016 SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 67 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 PANTHER PTHR30118 1 201 5.7E-18 T 22-04-2016 SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 SUPERFAMILY SSF46785 13 88 3.54E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 Pfam PF03466 LysR substrate binding domain 128 228 6.4E-8 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 Gene3D G3DSA:1.10.10.10 2 86 5.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15145 a3523d425a54dcd4e946d0652f2856b6 324 SUPERFAMILY SSF53850 98 314 6.15E-12 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 Pfam PF00326 Prolyl oligopeptidase family 448 664 7.3E-42 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 Gene3D G3DSA:3.40.50.1820 365 664 7.7E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 PANTHER PTHR11731:SF140 41 123 8.5E-66 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 PANTHER PTHR11731:SF140 302 664 8.5E-66 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 Gene3D G3DSA:2.130.10.10 265 319 8.6E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 Gene3D G3DSA:2.130.10.10 162 192 8.6E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 Gene3D G3DSA:2.130.10.10 14 73 8.6E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 PANTHER PTHR11731 41 123 8.5E-66 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 PANTHER PTHR11731 302 664 8.5E-66 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 SUPERFAMILY SSF53474 404 664 2.11E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 SUPERFAMILY SSF82171 253 387 2.55E-7 T 22-04-2016 SAMA_RS19035 23c1a77de8cd6d384ec8ca7f67526804 665 SUPERFAMILY SSF82171 37 208 2.55E-7 T 22-04-2016 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 Pfam PF01019 Gamma-glutamyltranspeptidase 59 563 1.0E-160 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 SUPERFAMILY SSF56235 31 568 7.18E-181 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 44 560 1.1E-121 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PANTHER PTHR11686 1 568 1.3E-259 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PANTHER PTHR11686:SF8 1 568 1.3E-259 T 22-04-2016 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 448 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 474 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 155 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 66 91 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS03535 9759aa7f1d62008ca8f3c0a536adb782 568 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 174 6.9E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SAMA_RS07890 1401bed764a49e5cee0a6e82b61e8bfd 313 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 157 175 8.4E-23 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS07890 1401bed764a49e5cee0a6e82b61e8bfd 313 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 179 194 8.4E-23 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS07890 1401bed764a49e5cee0a6e82b61e8bfd 313 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 114 130 8.4E-23 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS07890 1401bed764a49e5cee0a6e82b61e8bfd 313 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 96 110 8.4E-23 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS07890 1401bed764a49e5cee0a6e82b61e8bfd 313 Pfam PF01752 Collagenase 38 283 6.3E-81 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 PANTHER PTHR30191 1 760 0.0 T 22-04-2016 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 Pfam PF01228 Glycine radical 630 741 4.5E-42 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 PANTHER PTHR30191:SF0 1 760 0.0 T 22-04-2016 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 Gene3D G3DSA:3.20.70.20 6 758 0.0 T 22-04-2016 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 Pfam PF02901 Pyruvate formate lyase-like 25 614 2.9E-204 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SAMA_RS07795 044c4760836a6b5864e45fbc57fa1d01 760 SUPERFAMILY SSF51998 6 758 1.34E-288 T 22-04-2016 SAMA_RS11785 6270b3be22656413f1cd00751d3121a5 307 SUPERFAMILY SSF51735 1 298 9.31E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11785 6270b3be22656413f1cd00751d3121a5 307 PANTHER PTHR10366:SF329 2 299 2.0E-48 T 22-04-2016 SAMA_RS11785 6270b3be22656413f1cd00751d3121a5 307 PANTHER PTHR10366 2 299 2.0E-48 T 22-04-2016 SAMA_RS11785 6270b3be22656413f1cd00751d3121a5 307 Gene3D G3DSA:3.40.50.720 1 299 1.7E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11785 6270b3be22656413f1cd00751d3121a5 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 1.3E-27 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 Gene3D G3DSA:1.10.10.60 4 63 5.3E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 5.6E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 PANTHER PTHR30055 1 165 2.3E-59 T 22-04-2016 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 PANTHER PTHR30055:SF44 1 165 2.3E-59 T 22-04-2016 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 Gene3D G3DSA:1.10.357.10 82 168 9.8E-9 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 SUPERFAMILY SSF48498 82 168 3.46E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS05705 e25d8e004f5f8efd0face9152dae6b48 190 SUPERFAMILY SSF46689 4 63 5.49E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 SUPERFAMILY SSF51735 1 294 8.01E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 213 1.1E-13 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 291 1.2E-104 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 PANTHER PTHR11092 1 295 2.1E-143 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 PANTHER PTHR11092:SF0 1 295 2.1E-143 T 22-04-2016 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 Pfam PF08338 Domain of unknown function (DUF1731) 248 294 9.0E-18 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 SAMA_RS07740 030f629dac7e1fea2b41519b8ed7f2fb 295 Gene3D G3DSA:3.40.50.720 1 243 9.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07870 4f6b8567ced13587f3763b83820cd374 264 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 16 256 28.179 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 SAMA_RS07870 4f6b8567ced13587f3763b83820cd374 264 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 22 238 4.1E-40 T 22-04-2016 SAMA_RS07870 4f6b8567ced13587f3763b83820cd374 264 PANTHER PTHR37468 9 264 1.7E-101 T 22-04-2016 SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 SUPERFAMILY SSF51430 1 344 2.75E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 Gene3D G3DSA:3.20.20.100 1 344 9.3E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 Pfam PF00248 Aldo/keto reductase family 16 336 3.4E-71 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PANTHER PTHR11732:SF112 151 345 2.8E-195 T 22-04-2016 SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PANTHER PTHR11732:SF112 1 133 2.8E-195 T 22-04-2016 SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PRINTS PR00069 Aldo-keto reductase signature 163 180 6.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PRINTS PR00069 Aldo-keto reductase signature 115 133 6.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PANTHER PTHR11732 151 345 2.8E-195 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SAMA_RS14515 2637027f732dc2ee293cb915028f2874 345 PANTHER PTHR11732 1 133 2.8E-195 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 Pfam PF13444 Acetyltransferase (GNAT) domain 325 425 3.8E-25 T 22-04-2016 SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 PANTHER PTHR37323 1 586 2.1E-110 T 22-04-2016 SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 PANTHER PTHR37323:SF1 1 586 2.1E-110 T 22-04-2016 SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 Pfam PF01553 Acyltransferase 72 194 1.4E-5 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 SMART SM00563 82 199 0.0036 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 SUPERFAMILY SSF55729 307 475 1.27E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05175 82b45ffed4f17940cb5b629bbc1168dd 586 SUPERFAMILY SSF69593 71 265 3.79E-11 T 22-04-2016 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PIRSF PIRSF500176 2 332 6.1E-109 T 22-04-2016 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 Gene3D G3DSA:3.40.50.40 210 335 4.0E-47 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 Gene3D G3DSA:3.40.50.1170 5 201 3.6E-77 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PIRSF PIRSF001220 1 334 2.8E-90 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 335 2.6E-110 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PANTHER PTHR11707 1 337 4.6E-237 T 22-04-2016 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 SMART SM00870 5 323 1.9E-137 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 Pfam PF00710 Asparaginase, N-terminal 6 190 5.0E-65 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 PANTHER PTHR11707:SF31 1 337 4.6E-237 T 22-04-2016 SAMA_RS08980 76476559f84d036d39289b950d6f0f21 337 SUPERFAMILY SSF53774 3 335 8.5E-109 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 SMART SM01228 546 617 5.6E-46 T 22-04-2016 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.68 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 SUPERFAMILY SSF51905 6 66 1.52E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 SUPERFAMILY SSF51905 97 261 1.52E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 212 234 8.0E-5 T 22-04-2016 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.0E-5 T 22-04-2016 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.5E-282 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 Pfam PF01134 Glucose inhibited division protein A 8 399 2.2E-168 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 Gene3D G3DSA:3.50.50.60 7 231 3.8E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS19000 2e1b1da3f16b70139db4e8c44b84ccd5 629 Pfam PF13932 GidA associated domain 403 616 4.6E-72 T 22-04-2016 IPR026904 GidA associated domain 3 SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 PANTHER PTHR23501 21 402 2.0E-62 T 22-04-2016 SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 PANTHER PTHR23501:SF11 21 402 2.0E-62 T 22-04-2016 SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 SUPERFAMILY SSF103473 11 405 1.96E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 Gene3D G3DSA:1.20.1250.20 17 195 2.7E-19 T 22-04-2016 SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 Gene3D G3DSA:1.20.1250.20 225 404 1.1E-11 T 22-04-2016 SAMA_RS11615 83b010efc4ed338c055f9a387ec71f6a 413 Pfam PF07690 Major Facilitator Superfamily 22 365 1.8E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 Pfam PF00589 Phage integrase family 204 382 5.0E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 PANTHER PTHR30629 21 402 7.5E-59 T 22-04-2016 SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 Gene3D G3DSA:1.10.443.10 202 385 9.1E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 PANTHER PTHR30629:SF4 21 402 7.5E-59 T 22-04-2016 SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 Gene3D G3DSA:1.10.150.130 123 192 1.4E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SAMA_RS01710 0c753eaf36ecde2aecc49f79f37d42ee 515 SUPERFAMILY SSF56349 97 391 6.77E-50 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 PANTHER PTHR35890:SF4 28 184 9.9E-64 T 22-04-2016 SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 PANTHER PTHR35890 28 184 9.9E-64 T 22-04-2016 SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 Pfam PF03974 Ecotin 57 176 3.8E-46 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 PIRSF PIRSF006865 23 185 1.0E-52 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 SUPERFAMILY SSF49772 53 184 2.62E-51 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain SAMA_RS09145 d4489ca459f98a7ce46defd26640fafd 185 Gene3D G3DSA:2.60.40.550 49 184 3.3E-54 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain SAMA_RS17270 7ca09ae9a15203b8f3268dafe09d82e4 238 Pfam PF06764 Protein of unknown function (DUF1223) 35 223 3.4E-44 T 22-04-2016 IPR010634 Protein of unknown function DUF1223 SAMA_RS17270 7ca09ae9a15203b8f3268dafe09d82e4 238 SUPERFAMILY SSF52833 29 232 3.58E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS17270 7ca09ae9a15203b8f3268dafe09d82e4 238 PANTHER PTHR36057 33 236 1.8E-22 T 22-04-2016 SAMA_RS17270 7ca09ae9a15203b8f3268dafe09d82e4 238 PANTHER PTHR36057:SF1 33 236 1.8E-22 T 22-04-2016 SAMA_RS03240 226d3cc89a93f7e29165be9a10cbfcc7 174 Pfam PF03848 Tellurite resistance protein TehB 20 152 3.5E-7 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain SAMA_RS03240 226d3cc89a93f7e29165be9a10cbfcc7 174 Gene3D G3DSA:3.40.50.150 20 171 2.7E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03240 226d3cc89a93f7e29165be9a10cbfcc7 174 SUPERFAMILY SSF53335 15 154 1.06E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 Gene3D G3DSA:3.30.1780.10 1 136 1.6E-34 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 PIRSF PIRSF001439 1 317 2.1E-61 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 17 316 3.7E-57 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 SUPERFAMILY SSF51735 1 316 7.22E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 Gene3D G3DSA:3.40.50.720 137 298 9.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 PANTHER PTHR13812 1 317 3.4E-75 T 22-04-2016 SAMA_RS13680 328dbd7c13a07e2422a248d9daea28b4 317 PANTHER PTHR13812:SF19 1 317 3.4E-75 T 22-04-2016 SAMA_RS00690 44fc59de6d4936b44377da144b3e4ea1 398 SMART SM00471 157 293 1.1E-7 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS00690 44fc59de6d4936b44377da144b3e4ea1 398 SUPERFAMILY SSF109604 153 323 1.43E-30 T 22-04-2016 SAMA_RS00690 44fc59de6d4936b44377da144b3e4ea1 398 Pfam PF13487 HD domain 212 274 4.9E-13 T 22-04-2016 SAMA_RS00690 44fc59de6d4936b44377da144b3e4ea1 398 Pfam PF11871 Domain of unknown function (DUF3391) 11 129 3.5E-21 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 SAMA_RS00690 44fc59de6d4936b44377da144b3e4ea1 398 Gene3D G3DSA:1.10.3210.10 158 292 8.4E-18 T 22-04-2016 IPR006674 HD domain SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 SMART SM00387 486 604 2.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 Gene3D G3DSA:3.30.565.10 445 602 7.9E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 SUPERFAMILY SSF55874 439 604 1.31E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PANTHER PTHR24423:SF505 15 36 5.0E-36 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PANTHER PTHR24423:SF505 362 607 5.0E-36 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 549 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 3.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 602 3.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 34 270 1.6E-37 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 SUPERFAMILY SSF53850 30 270 4.04E-21 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 SMART SM00388 369 444 0.0014 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PANTHER PTHR24423 15 36 5.0E-36 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 PANTHER PTHR24423 362 607 5.0E-36 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 Gene3D G3DSA:3.40.190.10 122 222 3.0E-7 T 22-04-2016 SAMA_RS16580 a2facbec5f631ecceefc3759f630819a 609 SUPERFAMILY SSF47384 359 440 1.06E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 2.9E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 Gene3D G3DSA:1.20.5.1030 62 121 1.4E-22 T 22-04-2016 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PANTHER PTHR33910 1 123 8.6E-27 T 22-04-2016 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.4E-29 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.4E-29 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PRINTS PR01650 Bacterial translocase SecE signature 107 123 2.4E-29 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.4E-29 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 11.631 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 121 1.4E-16 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SAMA_RS01060 ac8e734450bb9ef33b5db6f841700fe3 123 PANTHER PTHR33910:SF1 1 123 8.6E-27 T 22-04-2016 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 Pfam PF02446 4-alpha-glucanotransferase 180 693 3.6E-89 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 PANTHER PTHR32438 158 569 3.7E-98 T 22-04-2016 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 PANTHER PTHR32438 608 738 3.7E-98 T 22-04-2016 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 132 705 1.5E-88 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 Gene3D G3DSA:3.20.20.80 172 581 4.5E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 Gene3D G3DSA:3.20.20.80 641 707 4.5E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 PANTHER PTHR32438:SF5 158 569 3.7E-98 T 22-04-2016 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 PANTHER PTHR32438:SF5 608 738 3.7E-98 T 22-04-2016 SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 SUPERFAMILY SSF51445 637 709 1.67E-107 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS12815 f8963269e8999be37a3925d603b24aa9 743 SUPERFAMILY SSF51445 172 578 1.67E-107 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Gene3D G3DSA:3.30.2090.10 186 270 5.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PANTHER PTHR32063 2 1040 0.0 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82866 295 505 4.58E-41 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82714 187 269 3.27E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82866 806 1041 7.19E-47 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Gene3D G3DSA:1.10.3850.10 815 1040 5.6E-49 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Gene3D G3DSA:1.10.3850.10 278 507 2.0E-65 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1044 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Gene3D G3DSA:3.30.2090.10 724 811 3.8E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82693 137 184 2.88E-23 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82693 272 329 2.88E-23 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Pfam PF00873 AcrB/AcrD/AcrF family 5 1036 2.2E-233 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 PANTHER PTHR32063:SF19 2 1040 0.0 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 Gene3D G3DSA:3.30.70.1430 46 140 1.1E-24 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82693 46 128 2.62E-20 T 22-04-2016 SAMA_RS18070 dafb620ccf204de892055addd34890d4 1048 SUPERFAMILY SSF82714 724 807 8.37E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 SUPERFAMILY SSF46894 126 226 5.67E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 Gene3D G3DSA:1.10.10.10 127 226 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 PANTHER PTHR26402:SF292 2 225 6.3E-81 T 22-04-2016 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 Gene3D G3DSA:3.40.50.2300 3 122 3.9E-40 T 22-04-2016 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 SUPERFAMILY SSF52172 2 125 7.4E-42 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 SMART SM00862 150 226 2.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 3.2E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 Pfam PF00072 Response regulator receiver domain 5 113 2.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 PANTHER PTHR26402 2 225 6.3E-81 T 22-04-2016 SAMA_RS17855 03c0af1dc4e06935871a86e04ab29a60 228 SMART SM00448 2 112 6.4E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 Gene3D G3DSA:3.30.70.920 60 140 5.1E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS17990 d44967de3f576459e12542eabc684366 143 SMART SM00344 1 106 2.2E-23 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.5E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.5E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.5E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 Gene3D G3DSA:1.10.10.10 1 52 5.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17990 d44967de3f576459e12542eabc684366 143 PANTHER PTHR30154 1 140 4.6E-43 T 22-04-2016 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 SUPERFAMILY SSF46785 1 56 6.26E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17990 d44967de3f576459e12542eabc684366 143 Pfam PF01037 Lrp/AsnC ligand binding domain 75 136 7.8E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SAMA_RS17990 d44967de3f576459e12542eabc684366 143 PANTHER PTHR30154:SF12 1 140 4.6E-43 T 22-04-2016 SAMA_RS17990 d44967de3f576459e12542eabc684366 143 SUPERFAMILY SSF54909 61 140 1.03E-15 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS17990 d44967de3f576459e12542eabc684366 143 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 3.3E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 PIRSF PIRSF000178 1 131 6.5E-31 T 22-04-2016 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 125 1.1E-28 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 87 100 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 SUPERFAMILY SSF81343 5 131 3.11E-34 T 22-04-2016 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 Gene3D G3DSA:1.20.1300.10 5 131 9.9E-40 T 22-04-2016 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 PANTHER PTHR10978 1 131 6.4E-73 T 22-04-2016 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 10 129 1.7E-41 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 SAMA_RS07410 18621e0f42d1a91f7235dca70be5ef46 131 PANTHER PTHR10978:SF4 1 131 6.4E-73 T 22-04-2016 SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 Pfam PF02417 Chromate transporter 215 377 2.4E-31 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 Pfam PF02417 Chromate transporter 2 168 2.3E-30 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 PIRSF PIRSF004810 1 381 5.1E-103 T 22-04-2016 IPR014047 Chromate transporter, long chain SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 PANTHER PTHR33567 1 377 5.5E-109 T 22-04-2016 SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 377 3.5E-80 T 22-04-2016 IPR014047 Chromate transporter, long chain SAMA_RS03375 ef60329f646a8c8b05bab1acb5846ee3 381 PANTHER PTHR33567:SF3 1 377 5.5E-109 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 PANTHER PTHR30118:SF9 1 322 1.3E-172 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 SUPERFAMILY SSF53850 92 311 1.61E-45 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Gene3D G3DSA:3.40.190.10 92 183 6.3E-24 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Gene3D G3DSA:3.40.190.10 288 315 6.3E-24 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 PANTHER PTHR30118 1 322 1.3E-172 T 22-04-2016 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 SUPERFAMILY SSF46785 7 86 1.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Gene3D G3DSA:1.10.10.10 3 88 4.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Pfam PF03466 LysR substrate binding domain 97 313 9.6E-19 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS17940 9811f4d39a98c480a9d06393a57fdf62 326 Gene3D G3DSA:3.40.190.10 184 283 7.5E-30 T 22-04-2016 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 1.9E-4 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 262 349 1.7E-15 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 Gene3D G3DSA:3.40.47.10 186 349 1.6E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 SUPERFAMILY SSF53901 5 349 3.15E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 PANTHER PTHR34069 2 349 1.2E-88 T 22-04-2016 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 Gene3D G3DSA:3.40.47.10 1 185 2.5E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS06195 1b389bb2af2303bb59f62ea69896135c 349 PANTHER PTHR34069:SF2 2 349 1.2E-88 T 22-04-2016 SAMA_RS12555 3afe904eb6e4d7ec2fe316e0e4246fe0 122 Gene3D G3DSA:3.90.10.10 13 115 2.2E-12 T 22-04-2016 SAMA_RS12555 3afe904eb6e4d7ec2fe316e0e4246fe0 122 Pfam PF14537 Cytochrome c3 42 114 4.8E-13 T 22-04-2016 SAMA_RS12555 3afe904eb6e4d7ec2fe316e0e4246fe0 122 SUPERFAMILY SSF48695 35 117 2.6E-13 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS11090 c47d1f1ed675e55a44bbccd191a2abdc 303 Gene3D G3DSA:3.40.630.10 12 209 7.1E-59 T 22-04-2016 SAMA_RS11090 c47d1f1ed675e55a44bbccd191a2abdc 303 Gene3D G3DSA:3.40.630.10 246 299 7.1E-59 T 22-04-2016 SAMA_RS11090 c47d1f1ed675e55a44bbccd191a2abdc 303 Pfam PF10994 Protein of unknown function (DUF2817) 81 146 1.8E-6 T 22-04-2016 IPR021259 Protein of unknown function DUF2817 SAMA_RS11090 c47d1f1ed675e55a44bbccd191a2abdc 303 SUPERFAMILY SSF53187 30 282 5.62E-35 T 22-04-2016 SAMA_RS08245 bfee742aab3e1d73c4bc31219e0e95ed 153 Pfam PF13185 GAF domain 44 149 4.7E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS08245 bfee742aab3e1d73c4bc31219e0e95ed 153 PANTHER PTHR21021 4 151 1.2E-55 T 22-04-2016 SAMA_RS08245 bfee742aab3e1d73c4bc31219e0e95ed 153 Gene3D G3DSA:3.30.450.40 2 150 3.8E-51 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS08245 bfee742aab3e1d73c4bc31219e0e95ed 153 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site SAMA_RS08245 bfee742aab3e1d73c4bc31219e0e95ed 153 SUPERFAMILY SSF55781 4 149 9.48E-42 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 Pfam PF01551 Peptidase family M23 279 372 9.3E-27 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 32 245 0.004 T 22-04-2016 SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 PANTHER PTHR21666:SF204 28 376 8.1E-109 T 22-04-2016 SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 Gene3D G3DSA:2.70.70.10 242 377 3.0E-37 T 22-04-2016 SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 SUPERFAMILY SSF51261 165 376 7.85E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS00300 c9f6c02826fa73eee836390976240f79 378 PANTHER PTHR21666 28 376 8.1E-109 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 328 340 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 SUPERFAMILY SSF52425 2 190 2.49E-45 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Gene3D G3DSA:1.25.40.80 205 286 1.9E-37 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Gene3D G3DSA:1.25.40.80 132 167 1.9E-37 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Gene3D G3DSA:3.40.50.620 3 119 2.2E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Pfam PF00875 DNA photolyase 3 176 1.9E-42 T 22-04-2016 IPR006050 DNA photolyase, N-terminal SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Pfam PF03441 FAD binding domain of DNA photolyase 278 469 9.6E-83 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PANTHER PTHR11455 1 474 7.9E-185 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 Gene3D G3DSA:1.10.579.10 287 473 1.0E-75 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 SUPERFAMILY SSF48173 199 474 3.66E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PRINTS PR00147 DNA photolyase signature 387 401 1.5E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PRINTS PR00147 DNA photolyase signature 328 344 1.5E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PRINTS PR00147 DNA photolyase signature 348 366 1.5E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PRINTS PR00147 DNA photolyase signature 148 164 1.5E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 PANTHER PTHR11455:SF18 1 474 7.9E-185 T 22-04-2016 SAMA_RS04250 54c073d03c6f2c2cabf8a05f205295fa 475 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 348 367 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 Gene3D G3DSA:3.90.780.10 382 565 3.1E-27 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 SUPERFAMILY SSF55816 359 561 1.57E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PRINTS PR01607 Apyrase family signature 211 228 4.1E-17 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PRINTS PR01607 Apyrase family signature 230 253 4.1E-17 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PRINTS PR01607 Apyrase family signature 269 289 4.1E-17 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PRINTS PR01607 Apyrase family signature 6 24 4.1E-17 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PRINTS PR01607 Apyrase family signature 505 524 4.1E-17 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 Pfam PF00149 Calcineurin-like phosphoesterase 10 247 8.9E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PANTHER PTHR11575:SF7 2 292 1.4E-120 T 22-04-2016 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 SUPERFAMILY SSF56300 5 314 6.79E-72 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 Pfam PF02872 5'-nucleotidase, C-terminal domain 387 530 2.5E-22 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PANTHER PTHR11575:SF7 324 561 1.4E-120 T 22-04-2016 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PANTHER PTHR11575 324 561 1.4E-120 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 PANTHER PTHR11575 2 292 1.4E-120 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SAMA_RS12395 e2e7ff713608f92cc494bb7371f01f9b 573 Gene3D G3DSA:3.60.21.10 5 346 4.8E-69 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS04425 0dfca66f338ed215cdaff00901ff739f 124 Pfam PF11042 Protein of unknown function (DUF2750) 18 118 2.8E-37 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 Gene3D G3DSA:3.30.70.270 139 301 4.4E-44 T 22-04-2016 SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 133 1.6E-8 T 22-04-2016 IPR000014 PAS domain SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 PANTHER PTHR10799:SF750 165 301 1.3E-21 T 22-04-2016 SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 SUPERFAMILY SSF55073 142 301 3.06E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 301 4.8E-43 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 298 1.7E-40 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 SMART SM00267 126 302 8.5E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 SUPERFAMILY SSF55785 16 109 1.69E-9 T 22-04-2016 IPR000014 PAS domain SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 PANTHER PTHR10799 165 301 1.3E-21 T 22-04-2016 SAMA_RS02330 e8152d81ea42f5462f77553dc838e8b6 303 Gene3D G3DSA:3.30.450.20 17 109 1.7E-8 T 22-04-2016 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PRINTS PR01008 Flagellar L-ring protein signature 184 198 7.9E-25 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PRINTS PR01008 Flagellar L-ring protein signature 65 77 7.9E-25 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PRINTS PR01008 Flagellar L-ring protein signature 200 214 7.9E-25 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PRINTS PR01008 Flagellar L-ring protein signature 137 152 7.9E-25 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PRINTS PR01008 Flagellar L-ring protein signature 163 179 7.9E-25 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PANTHER PTHR34933 1 224 4.7E-100 T 22-04-2016 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 Pfam PF02107 Flagellar L-ring protein 44 223 1.9E-59 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 221 26.632 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SAMA_RS12100 0932a456c15ebe1434630f49b9b7c094 224 PANTHER PTHR34933:SF2 1 224 4.7E-100 T 22-04-2016 SAMA_RS05730 c2f8857ae3c109b1b567f05b9b217f45 244 SUPERFAMILY SSF53850 18 214 1.05E-22 T 22-04-2016 SAMA_RS05730 c2f8857ae3c109b1b567f05b9b217f45 244 Gene3D G3DSA:3.40.190.10 37 140 5.6E-7 T 22-04-2016 SAMA_RS05730 c2f8857ae3c109b1b567f05b9b217f45 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 189 9.2E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 SUPERFAMILY SSF55729 1 338 7.92E-133 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 6.0E-135 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 Gene3D G3DSA:3.40.630.30 1 80 1.5E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 Gene3D G3DSA:3.40.630.30 115 143 1.5E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 4.6E-140 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 PANTHER PTHR30420 1 339 2.9E-187 T 22-04-2016 SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 PANTHER PTHR30420:SF1 1 339 2.9E-187 T 22-04-2016 SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 Gene3D G3DSA:2.40.40.20 274 339 3.2E-21 T 22-04-2016 SAMA_RS15700 6d3e132d7bb5f96ecb7a76c612bbfdd1 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 4.6E-140 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 SUPERFAMILY SSF55174 7 56 2.55E-7 T 22-04-2016 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 PANTHER PTHR21600 7 230 3.6E-61 T 22-04-2016 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 228 2.7E-40 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 SUPERFAMILY SSF55120 65 231 1.92E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 Gene3D G3DSA:3.10.290.10 7 68 1.1E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 Pfam PF00849 RNA pseudouridylate synthase 66 194 1.2E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS14560 78ee6c893210e0ba0e1c2a84779d8f25 251 PANTHER PTHR21600:SF19 7 230 3.6E-61 T 22-04-2016 SAMA_RS00250 25654623a1d559c2adc94b4b6bf20301 143 SUPERFAMILY SSF46458 23 143 2.88E-35 T 22-04-2016 IPR009050 Globin-like SAMA_RS00250 25654623a1d559c2adc94b4b6bf20301 143 Gene3D G3DSA:1.10.490.10 20 143 3.7E-38 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SAMA_RS00250 25654623a1d559c2adc94b4b6bf20301 143 Pfam PF01152 Bacterial-like globin 22 142 3.0E-38 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SAMA_RS00250 25654623a1d559c2adc94b4b6bf20301 143 PANTHER PTHR10681 5 132 1.5E-22 T 22-04-2016 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PRINTS PR01003 Flagellar assembly protein FliH signature 103 121 4.5E-12 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PRINTS PR01003 Flagellar assembly protein FliH signature 122 141 4.5E-12 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PRINTS PR01003 Flagellar assembly protein FliH signature 212 228 4.5E-12 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PRINTS PR01003 Flagellar assembly protein FliH signature 142 159 4.5E-12 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PRINTS PR01003 Flagellar assembly protein FliH signature 80 102 4.5E-12 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 Pfam PF02108 Flagellar assembly protein FliH 122 246 2.4E-32 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PANTHER PTHR34982:SF1 1 269 4.0E-59 T 22-04-2016 SAMA_RS12015 576b505b1ab3accac12b733e9b26a12f 300 PANTHER PTHR34982 1 269 4.0E-59 T 22-04-2016 SAMA_RS04120 f8dc8bd1719ea5ecaf735432d6369e4f 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 221 1.3E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS04120 f8dc8bd1719ea5ecaf735432d6369e4f 281 SUPERFAMILY SSF53790 3 246 2.02E-28 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS04120 f8dc8bd1719ea5ecaf735432d6369e4f 281 Gene3D G3DSA:3.40.1010.10 2 122 1.1E-11 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 TIGRFAM TIGR01321 TrpR: trp operon repressor 4 81 2.4E-19 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 5 78 1.0E-28 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 PANTHER PTHR38025:SF1 1 95 6.1E-36 T 22-04-2016 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 PANTHER PTHR38025 1 95 6.1E-36 T 22-04-2016 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 PIRSF PIRSF003196 1 94 1.2E-29 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 Gene3D G3DSA:1.10.1270.10 3 91 1.9E-29 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 SUPERFAMILY SSF48295 4 90 2.77E-27 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SAMA_RS04710 c703ab01c6ce18e7a886fe854de6f6d8 98 Pfam PF01371 Trp repressor protein 4 89 7.6E-28 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SAMA_RS10805 52404b99ac3c88fc01d9beddc727ce91 270 Pfam PF03618 Kinase/pyrophosphorylase 5 260 3.2E-76 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SAMA_RS10805 52404b99ac3c88fc01d9beddc727ce91 270 PANTHER PTHR31756 1 270 6.4E-122 T 22-04-2016 SAMA_RS10805 52404b99ac3c88fc01d9beddc727ce91 270 PANTHER PTHR31756:SF3 1 270 6.4E-122 T 22-04-2016 SAMA_RS10805 52404b99ac3c88fc01d9beddc727ce91 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 269 75.27 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein SAMA_RS18615 046c2a6b655dfdc122e40a8b01991cef 110 Pfam PF00085 Thioredoxin 21 101 1.5E-5 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SAMA_RS18615 046c2a6b655dfdc122e40a8b01991cef 110 Gene3D G3DSA:3.40.30.10 3 103 1.3E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18615 046c2a6b655dfdc122e40a8b01991cef 110 SUPERFAMILY SSF52833 6 106 3.8E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18600 9a36230904c78efff18462e8f496ca2e 141 PANTHER PTHR11527 3 140 6.8E-31 T 22-04-2016 IPR031107 Small heat shock protein HSP20 SAMA_RS18600 9a36230904c78efff18462e8f496ca2e 141 Pfam PF00011 Hsp20/alpha crystallin family 41 141 1.9E-26 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SAMA_RS18600 9a36230904c78efff18462e8f496ca2e 141 SUPERFAMILY SSF49764 12 140 7.32E-36 T 22-04-2016 IPR008978 HSP20-like chaperone SAMA_RS18600 9a36230904c78efff18462e8f496ca2e 141 Gene3D G3DSA:2.60.40.790 2 140 5.4E-38 T 22-04-2016 IPR008978 HSP20-like chaperone SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 188 30.09 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 PANTHER PTHR10520 4 194 3.6E-98 T 22-04-2016 SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 192 4.6E-71 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 Gene3D G3DSA:3.40.50.170 4 199 4.5E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 Pfam PF00551 Formyl transferase 4 182 1.9E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS10970 d83170988adfc72eada6eb8b098c5808 212 SUPERFAMILY SSF53328 4 199 7.72E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 PIRSF PIRSF000370 2 223 1.3E-64 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 PANTHER PTHR11228:SF6 73 222 2.2E-49 T 22-04-2016 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 PANTHER PTHR11228:SF6 1 57 2.2E-49 T 22-04-2016 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 Pfam PF04055 Radical SAM superfamily 27 124 2.1E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 PANTHER PTHR11228 73 222 2.2E-49 T 22-04-2016 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 PANTHER PTHR11228 1 57 2.2E-49 T 22-04-2016 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 10 223 1.1E-105 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 223 34.826 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 Pfam PF13394 4Fe-4S single cluster domain 25 129 8.7E-12 T 22-04-2016 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 Gene3D G3DSA:3.20.20.70 14 123 1.8E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09535 bf51c8735ba13ddbe861d1c2e4e76fda 223 SUPERFAMILY SSF102114 22 124 4.32E-5 T 22-04-2016 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 10 254 8.5E-101 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 PANTHER PTHR11473 16 229 3.5E-91 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 116 127 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 Gene3D G3DSA:1.10.800.10 4 242 2.1E-89 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 SUPERFAMILY SSF56534 3 248 6.93E-99 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 7.6E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 178 196 7.6E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 137 156 7.6E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 73 95 7.6E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS11655 7bdad430c068e4040bf8d8dbe32d40e1 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 229 4.5E-48 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 SAMA_RS14055 2964eed38beb38444ec8402d6ff1015a 219 PANTHER PTHR12151 172 209 3.8E-43 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SAMA_RS14055 2964eed38beb38444ec8402d6ff1015a 219 PANTHER PTHR12151 40 156 3.8E-43 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SAMA_RS14055 2964eed38beb38444ec8402d6ff1015a 219 Gene3D G3DSA:3.40.30.10 18 215 9.9E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14055 2964eed38beb38444ec8402d6ff1015a 219 Pfam PF02630 SCO1/SenC 23 161 1.6E-32 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SAMA_RS14055 2964eed38beb38444ec8402d6ff1015a 219 SUPERFAMILY SSF52833 40 214 3.17E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Gene3D G3DSA:3.30.565.10 198 349 8.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SUPERFAMILY SSF55874 189 350 1.14E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Gene3D G3DSA:3.30.450.20 28 67 4.4E-7 T 22-04-2016 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 196 1.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SUPERFAMILY SSF55785 29 91 2.09E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SMART SM00388 134 200 2.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SUPERFAMILY SSF47384 122 196 1.61E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 PANTHER PTHR24423 30 349 5.3E-91 T 22-04-2016 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SMART SM00387 243 347 8.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Gene3D G3DSA:1.10.287.130 130 196 5.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 344 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 SMART SM00091 30 93 1.2E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 Pfam PF13188 PAS domain 33 80 2.8E-4 T 22-04-2016 IPR000014 PAS domain SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 325 4.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 306 4.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 292 4.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS12040 c7641066e9263c5d8a4e6121b715afb1 357 PANTHER PTHR24423:SF474 30 349 5.3E-91 T 22-04-2016 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 158 1.2E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 Pfam PF00593 TonB dependent receptor 478 727 1.3E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 Gene3D G3DSA:2.40.170.20 169 729 9.0E-80 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 PANTHER PTHR32552 12 729 4.5E-208 T 22-04-2016 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 Gene3D G3DSA:2.170.130.10 31 168 4.6E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 SUPERFAMILY SSF56935 33 729 2.27E-108 T 22-04-2016 SAMA_RS07555 cbf696d246829c8d5436c35fde3ddc0c 730 PANTHER PTHR32552:SF33 12 729 4.5E-208 T 22-04-2016 SAMA_RS03980 c8c7ba1377460309d64669e0c768d01c 70 Gene3D G3DSA:2.30.40.10 1 68 2.8E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS03980 c8c7ba1377460309d64669e0c768d01c 70 SUPERFAMILY SSF51338 2 69 1.73E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS16260 7870cdcbe31e8e5b06f541e7b6ff51be 157 PANTHER PTHR35458 1 156 3.9E-61 T 22-04-2016 SAMA_RS16260 7870cdcbe31e8e5b06f541e7b6ff51be 157 Gene3D G3DSA:3.40.50.1010 2 153 7.2E-47 T 22-04-2016 IPR029060 PIN domain-like SAMA_RS16260 7870cdcbe31e8e5b06f541e7b6ff51be 157 PANTHER PTHR35458:SF2 1 156 3.9E-61 T 22-04-2016 SAMA_RS16260 7870cdcbe31e8e5b06f541e7b6ff51be 157 Pfam PF01936 NYN domain 3 151 2.8E-40 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 359 5.1E-141 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 PIRSF PIRSF006487 1 363 2.2E-83 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 SUPERFAMILY SSF101790 271 361 4.74E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 PANTHER PTHR13847 5 345 1.3E-59 T 22-04-2016 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 SUPERFAMILY SSF103025 4 277 1.88E-91 T 22-04-2016 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 3.0E-86 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 PANTHER PTHR13847:SF5 5 345 1.3E-59 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Gene3D G3DSA:2.40.30.110 279 362 2.6E-30 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Gene3D G3DSA:3.30.70.1400 66 129 4.3E-33 T 22-04-2016 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Gene3D G3DSA:3.30.1360.120 3 65 6.0E-23 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Gene3D G3DSA:3.30.1360.120 130 231 1.0E-27 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 2.7E-21 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS14240 801c0040547936a4d707bf435ab916bd 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.782 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 8.4E-290 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 SUPERFAMILY SSF52540 16 244 2.71E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 Pfam PF12848 ABC transporter 230 303 1.4E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 Pfam PF00005 ABC transporter 340 473 2.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 Pfam PF00005 ABC transporter 22 191 2.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 Gene3D G3DSA:3.40.50.300 11 275 1.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 Gene3D G3DSA:3.40.50.300 322 532 1.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 SUPERFAMILY SSF52540 303 527 1.01E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 SMART SM00382 31 236 3.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS05285 5dfffac3c612514e7048dc6dc4acc29c 555 SMART SM00382 348 526 8.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 PANTHER PTHR10799:SF710 47 185 8.7E-31 T 22-04-2016 SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 PANTHER PTHR10799 47 185 8.7E-31 T 22-04-2016 SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 193 357 8.3E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 PANTHER PTHR10799:SF710 229 353 8.7E-31 T 22-04-2016 SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 Gene3D G3DSA:3.30.70.270 198 358 1.6E-51 T 22-04-2016 SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 353 4.7E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 SUPERFAMILY SSF55073 201 358 5.96E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 PANTHER PTHR10799 229 353 8.7E-31 T 22-04-2016 SAMA_RS19225 522616e070e8a5286242cbb966a84f78 359 SMART SM00267 185 357 7.5E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 SUPERFAMILY SSF46785 1 86 6.35E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 PANTHER PTHR30126:SF6 1 309 5.6E-215 T 22-04-2016 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 9.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 Gene3D G3DSA:1.10.10.10 1 81 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 SUPERFAMILY SSF53850 88 301 1.09E-43 T 22-04-2016 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 PANTHER PTHR30126 1 309 5.6E-215 T 22-04-2016 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 Gene3D G3DSA:3.40.190.10 91 183 3.0E-20 T 22-04-2016 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 Gene3D G3DSA:3.40.190.10 184 260 3.4E-28 T 22-04-2016 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS06915 d32ce9fb3c87fee480a9af6a4d62aea7 324 Pfam PF03466 LysR substrate binding domain 90 294 6.1E-41 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS13615 e443a8108c4a74d552ee366e3d67977a 151 Pfam PF13511 Domain of unknown function (DUF4124) 12 59 3.6E-15 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 SUPERFAMILY SSF55021 333 408 3.56E-18 T 22-04-2016 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 SUPERFAMILY SSF51735 108 295 2.13E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 PANTHER PTHR10996:SF18 1 369 1.2E-240 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 3.7E-35 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Pfam PF01842 ACT domain 346 400 1.6E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Gene3D G3DSA:3.40.50.720 120 297 4.9E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 SUPERFAMILY SSF52283 7 134 8.93E-48 T 22-04-2016 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 PANTHER PTHR10996 1 369 1.2E-240 T 22-04-2016 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.4E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Gene3D G3DSA:3.30.70.260 324 408 1.2E-28 T 22-04-2016 SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SAMA_RS15395 fc352ca35b3148e07c23e7e9659a81c5 409 Gene3D G3DSA:3.40.50.720 8 119 1.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS04940 26a7c732ec5c8861694ee29835ceeeae 378 Pfam PF16401 Domain of unknown function (DUF5009) 13 174 4.8E-8 T 22-04-2016 IPR032176 Domain of unknown function DUF5009 SAMA_RS04940 26a7c732ec5c8861694ee29835ceeeae 378 PANTHER PTHR31061 7 378 7.3E-74 T 22-04-2016 SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 Gene3D G3DSA:1.20.120.520 78 230 2.0E-21 T 22-04-2016 SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 PANTHER PTHR36438 2 231 2.8E-92 T 22-04-2016 SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 PANTHER PTHR36438:SF1 2 231 2.8E-92 T 22-04-2016 SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 Pfam PF04405 Domain of Unknown function (DUF542) 8 60 2.4E-21 T 22-04-2016 IPR019903 Repair of iron centres family SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 Pfam PF01814 Hemerythrin HHE cation binding domain 82 227 6.1E-27 T 22-04-2016 IPR012312 Haemerythrin-like SAMA_RS16850 cb551ba8f5d7fd240ddf209ccc68465d 234 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 227 9.7E-74 T 22-04-2016 IPR019903 Repair of iron centres family SAMA_RS18700 8a45594d138abb1818873e3e79e4e322 212 Pfam PF02517 CAAX protease self-immunity 108 194 3.7E-13 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 Pfam PF05494 MlaC protein 34 196 5.6E-50 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 PANTHER PTHR36573 1 210 1.7E-70 T 22-04-2016 SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 Gene3D G3DSA:1.10.10.640 71 111 4.7E-16 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 Gene3D G3DSA:1.10.10.640 171 201 4.7E-16 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 Gene3D G3DSA:3.10.450.50 26 70 1.8E-19 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 Gene3D G3DSA:3.10.450.50 114 170 1.8E-19 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS16060 fcc6a836a3c93a02944ca87975342a94 212 PIRSF PIRSF004649 1 208 2.2E-56 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 SMART SM00382 49 330 4.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Gene3D G3DSA:1.10.8.10 211 241 6.4E-32 T 22-04-2016 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Gene3D G3DSA:1.10.8.10 111 175 6.4E-32 T 22-04-2016 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 PANTHER PTHR11262 216 441 6.2E-212 T 22-04-2016 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 PANTHER PTHR11262 1 105 6.2E-212 T 22-04-2016 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 SMART SM01086 333 432 9.4E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 333 403 9.1E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Gene3D G3DSA:1.10.8.60 333 441 1.2E-35 T 22-04-2016 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 PANTHER PTHR11262:SF3 216 441 6.2E-212 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 PANTHER PTHR11262:SF3 1 105 6.2E-212 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 137 1.2E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 441 1.4E-220 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 SUPERFAMILY SSF52540 3 439 6.56E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 441 42.631 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Gene3D G3DSA:3.40.50.300 243 329 1.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Gene3D G3DSA:3.40.50.300 3 110 1.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02370 d48ebaa47dfc3dfadefabe5f41c74918 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 169 327 3.0E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SAMA_RS18205 8f6f53c131359578116a8f657f092e41 437 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 1.1E-73 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS18205 8f6f53c131359578116a8f657f092e41 437 Pfam PF01554 MatE 241 393 1.1E-8 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS18205 8f6f53c131359578116a8f657f092e41 437 Pfam PF01554 MatE 17 177 5.0E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS18205 8f6f53c131359578116a8f657f092e41 437 PANTHER PTHR11206:SF94 8 432 6.9E-123 T 22-04-2016 SAMA_RS18205 8f6f53c131359578116a8f657f092e41 437 PANTHER PTHR11206 8 432 6.9E-123 T 22-04-2016 SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 PANTHER PTHR38469:SF1 1 718 2.1E-210 T 22-04-2016 SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 PANTHER PTHR38469 1 718 2.1E-210 T 22-04-2016 SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 Pfam PF10459 Peptidase S46 18 716 3.7E-278 T 22-04-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 Gene3D G3DSA:2.40.10.10 640 699 5.3E-12 T 22-04-2016 SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 SUPERFAMILY SSF50494 172 281 1.69E-24 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 SUPERFAMILY SSF50494 4 94 1.69E-24 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS15340 d27f78109e8a018fe588b4590cf42a8a 718 SUPERFAMILY SSF50494 641 708 1.69E-24 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 Gene3D G3DSA:2.30.40.10 25 72 3.2E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 Pfam PF01979 Amidohydrolase family 65 385 4.0E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 PANTHER PTHR22642 14 412 8.7E-150 T 22-04-2016 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 Gene3D G3DSA:3.20.20.140 73 356 4.0E-41 T 22-04-2016 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 410 42.944 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 Gene3D G3DSA:2.30.40.10 357 392 1.9E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 SUPERFAMILY SSF51338 372 411 4.32E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 SUPERFAMILY SSF51338 3 67 4.32E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 SUPERFAMILY SSF51556 67 370 7.24E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 408 2.9E-144 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SAMA_RS00405 626bac78a4c6e746de60e074dc4b6744 412 PANTHER PTHR22642:SF1 14 412 8.7E-150 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 SUPERFAMILY SSF51905 3 338 3.58E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Gene3D G3DSA:3.30.390.30 337 463 1.4E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 SUPERFAMILY SSF55424 344 467 1.22E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Gene3D G3DSA:3.50.50.60 153 272 1.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PANTHER PTHR22912 1 460 9.0E-267 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PANTHER PTHR22912:SF160 1 460 9.0E-267 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 5.5E-42 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 5.5E-42 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 5.5E-42 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 5.5E-42 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.5E-42 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Gene3D G3DSA:3.50.50.60 273 336 9.6E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Gene3D G3DSA:3.50.50.60 6 150 9.6E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 5.9E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.9E-69 T 22-04-2016 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 329 1.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 461 2.2E-148 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SAMA_RS02050 358ec7fee427be462bea5b1003ff33c5 476 PIRSF PIRSF000350 1 469 3.7E-87 T 22-04-2016 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 Pfam PF02357 Transcription termination factor nusG 2 97 7.8E-18 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 Gene3D G3DSA:3.30.70.940 1 100 1.5E-15 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 47.435 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 SUPERFAMILY SSF50104 112 164 3.11E-8 T 22-04-2016 IPR008991 Translation protein SH3-like domain SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 SUPERFAMILY SSF82679 1 99 3.79E-25 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 Gene3D G3DSA:2.30.30.30 111 162 5.0E-6 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 PANTHER PTHR30265 1 165 3.0E-40 T 22-04-2016 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 PANTHER PTHR30265:SF3 1 165 3.0E-40 T 22-04-2016 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 SMART SM00738 1 101 6.2E-16 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SAMA_RS11865 3f9df792c729e37543169a517a3667ef 167 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 3.8E-53 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 SAMA_RS00420 0416de0106284eb04da1f45310705b16 317 SUPERFAMILY SSF53474 16 315 5.13E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00420 0416de0106284eb04da1f45310705b16 317 PANTHER PTHR11614:SF100 19 314 1.4E-103 T 22-04-2016 SAMA_RS00420 0416de0106284eb04da1f45310705b16 317 PANTHER PTHR11614 19 314 1.4E-103 T 22-04-2016 SAMA_RS00420 0416de0106284eb04da1f45310705b16 317 Gene3D G3DSA:3.40.50.1820 24 313 1.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00420 0416de0106284eb04da1f45310705b16 317 Pfam PF12146 Serine aminopeptidase, S33 45 296 2.3E-53 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SAMA_RS02805 7ea7472a77f8f0c07a294e96ce1d223c 318 Gene3D G3DSA:3.40.50.1820 9 317 2.7E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02805 7ea7472a77f8f0c07a294e96ce1d223c 318 Pfam PF07859 alpha/beta hydrolase fold 87 294 2.0E-55 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SAMA_RS02805 7ea7472a77f8f0c07a294e96ce1d223c 318 PANTHER PTHR23024 71 316 1.3E-61 T 22-04-2016 SAMA_RS02805 7ea7472a77f8f0c07a294e96ce1d223c 318 SUPERFAMILY SSF53474 66 316 8.68E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02805 7ea7472a77f8f0c07a294e96ce1d223c 318 PANTHER PTHR23024:SF24 71 316 1.3E-61 T 22-04-2016 SAMA_RS00370 7e981c2289831821bdedb373a915f041 144 PANTHER PTHR31793:SF1 9 139 4.9E-42 T 22-04-2016 SAMA_RS00370 7e981c2289831821bdedb373a915f041 144 Pfam PF13279 Thioesterase-like superfamily 16 134 3.7E-23 T 22-04-2016 SAMA_RS00370 7e981c2289831821bdedb373a915f041 144 PANTHER PTHR31793 9 139 4.9E-42 T 22-04-2016 SAMA_RS00370 7e981c2289831821bdedb373a915f041 144 Gene3D G3DSA:3.10.129.10 9 139 1.1E-41 T 22-04-2016 IPR029069 HotDog domain SAMA_RS00370 7e981c2289831821bdedb373a915f041 144 SUPERFAMILY SSF54637 9 136 1.98E-33 T 22-04-2016 IPR029069 HotDog domain SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 SUPERFAMILY SSF159245 38 386 4.05E-92 T 22-04-2016 SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 PANTHER PTHR38591 35 92 6.2E-85 T 22-04-2016 SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 PANTHER PTHR38591 112 386 6.2E-85 T 22-04-2016 SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 Gene3D G3DSA:2.40.370.10 49 257 7.6E-66 T 22-04-2016 IPR023374 AttH-like domain SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 Pfam PF17186 Lipocalin-like domain 260 386 3.9E-37 T 22-04-2016 IPR033451 AttH, lipocalin-like domain SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 Gene3D G3DSA:2.40.370.10 261 386 1.3E-38 T 22-04-2016 IPR023374 AttH-like domain SAMA_RS15435 d041c8c9f7fd05f5ed2fe325c8847bbd 386 Pfam PF07143 CrtC N-terminal lipocalin domain 62 254 1.4E-49 T 22-04-2016 IPR010791 AttH domain SAMA_RS06500 592159fc8fce7c8fcb07d0d52e17fbed 473 SUPERFAMILY SSF52540 7 51 7.47E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06500 592159fc8fce7c8fcb07d0d52e17fbed 473 PIRSF PIRSF019381 1 473 1.3E-185 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein SAMA_RS06500 592159fc8fce7c8fcb07d0d52e17fbed 473 PANTHER PTHR38605 3 473 3.6E-196 T 22-04-2016 SAMA_RS06500 592159fc8fce7c8fcb07d0d52e17fbed 473 PANTHER PTHR38605:SF1 3 473 3.6E-196 T 22-04-2016 SAMA_RS06500 592159fc8fce7c8fcb07d0d52e17fbed 473 Pfam PF04317 YcjX-like family, DUF463 25 472 2.3E-171 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 321 9.5E-146 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 SUPERFAMILY SSF102114 52 315 4.19E-67 T 22-04-2016 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 Gene3D G3DSA:3.20.20.70 53 312 6.0E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.54 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 PIRSF PIRSF005963 2 321 5.9E-129 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 SMART SM00729 84 293 1.4E-15 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 30 73 1.6E-6 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 PANTHER PTHR10949 10 321 1.1E-177 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SAMA_RS13555 83b3a2cc74574e3093211631ab673a06 321 Pfam PF04055 Radical SAM superfamily 91 251 2.0E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS06735 5d0a5c96e7564a5c8a803324e9e20f34 100 Pfam PF07238 PilZ domain 11 96 3.5E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SAMA_RS06735 5d0a5c96e7564a5c8a803324e9e20f34 100 SUPERFAMILY SSF141371 7 87 7.85E-7 T 22-04-2016 SAMA_RS19030 43b06c2eaba7ebdbc691b9b509bcfd1d 195 PANTHER PTHR37943 1 120 1.2E-19 T 22-04-2016 SAMA_RS19030 43b06c2eaba7ebdbc691b9b509bcfd1d 195 Pfam PF05962 HutD 9 177 1.4E-35 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves SAMA_RS19030 43b06c2eaba7ebdbc691b9b509bcfd1d 195 Gene3D G3DSA:2.60.120.10 9 117 1.7E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS19030 43b06c2eaba7ebdbc691b9b509bcfd1d 195 SUPERFAMILY SSF51182 1 172 6.14E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS19030 43b06c2eaba7ebdbc691b9b509bcfd1d 195 PANTHER PTHR37943:SF1 1 120 1.2E-19 T 22-04-2016 SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 PANTHER PTHR30212 21 226 1.2E-60 T 22-04-2016 SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 PANTHER PTHR30212:SF2 21 226 1.2E-60 T 22-04-2016 SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 Pfam PF03475 3-alpha domain 172 215 3.1E-18 T 22-04-2016 IPR005163 3-alpha domain SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 SUPERFAMILY SSF50800 12 227 3.87E-69 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 Pfam PF03473 MOSC domain 50 163 3.3E-16 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 SAMA_RS18300 5e746f3438cfd7e605a20275317c1747 229 Gene3D G3DSA:2.40.33.20 22 227 1.8E-72 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 Gene3D G3DSA:3.40.50.1700 415 628 3.8E-49 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PRINTS PR00133 Glycosyl hydrolase family 3 signature 240 256 1.6E-19 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PRINTS PR00133 Glycosyl hydrolase family 3 signature 310 328 1.6E-19 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PRINTS PR00133 Glycosyl hydrolase family 3 signature 155 174 1.6E-19 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PRINTS PR00133 Glycosyl hydrolase family 3 signature 131 147 1.6E-19 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PRINTS PR00133 Glycosyl hydrolase family 3 signature 201 217 1.6E-19 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 388 1.7E-76 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 Gene3D G3DSA:3.20.20.300 50 402 2.7E-103 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 SUPERFAMILY SSF52279 429 656 4.71E-36 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 SUPERFAMILY SSF51445 47 428 1.79E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 429 630 9.7E-26 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PANTHER PTHR30620 99 626 8.8E-165 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SAMA_RS07315 437f8f7681e37ccc85aa036f5d6f12ab 859 PANTHER PTHR30620 51 80 8.8E-165 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SAMA_RS13305 cc33f2d0ad8bd9a1d72b94bc21fee080 343 PANTHER PTHR35868:SF2 12 343 2.5E-114 T 22-04-2016 SAMA_RS13305 cc33f2d0ad8bd9a1d72b94bc21fee080 343 PANTHER PTHR35868 12 343 2.5E-114 T 22-04-2016 SAMA_RS13305 cc33f2d0ad8bd9a1d72b94bc21fee080 343 Pfam PF10974 Protein of unknown function (DUF2804) 20 342 1.1E-82 T 22-04-2016 IPR021243 Protein of unknown function DUF2804 SAMA_RS15350 42277e18ad2cb9f4f6fa2120c4f0808c 186 Pfam PF01169 Uncharacterized protein family UPF0016 104 179 6.6E-23 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 SAMA_RS15350 42277e18ad2cb9f4f6fa2120c4f0808c 186 Pfam PF01169 Uncharacterized protein family UPF0016 7 81 1.7E-18 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 SAMA_RS15350 42277e18ad2cb9f4f6fa2120c4f0808c 186 PANTHER PTHR12608 1 185 5.9E-42 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 SAMA_RS02590 dda6d7648648847c58752cf8930b688b 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 191 9.9E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02590 dda6d7648648847c58752cf8930b688b 292 Gene3D G3DSA:3.40.190.10 36 126 9.8E-5 T 22-04-2016 SAMA_RS02590 dda6d7648648847c58752cf8930b688b 292 Gene3D G3DSA:3.40.190.10 153 190 3.0E-4 T 22-04-2016 SAMA_RS02590 dda6d7648648847c58752cf8930b688b 292 SUPERFAMILY SSF53850 21 217 4.89E-20 T 22-04-2016 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 PANTHER PTHR12169:SF11 291 341 7.2E-117 T 22-04-2016 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 Pfam PF03969 AFG1-like ATPase 289 346 1.6E-14 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 Pfam PF03969 AFG1-like ATPase 22 258 1.2E-77 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 PANTHER PTHR12169:SF11 15 262 7.2E-117 T 22-04-2016 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 PANTHER PTHR12169 291 341 7.2E-117 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 PANTHER PTHR12169 15 262 7.2E-117 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 Gene3D G3DSA:3.40.50.300 5 140 3.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS13940 9a6c794321b5428ed71bc3ac5312bb67 348 SUPERFAMILY SSF52540 26 148 1.19E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 PANTHER PTHR34472 1 67 8.8E-14 T 22-04-2016 SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 Pfam PF02597 ThiS family 6 67 2.7E-11 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 SUPERFAMILY SSF54285 3 67 5.82E-14 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 Gene3D G3DSA:3.10.20.30 3 67 6.8E-18 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 4.4E-18 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis SAMA_RS09725 7ff63d3a653f8d987f339f999103047b 67 PANTHER PTHR34472:SF1 1 67 8.8E-14 T 22-04-2016 SAMA_RS18410 cc03402f389ba3b5ba980facb6b66b12 131 PANTHER PTHR35006 1 131 1.4E-32 T 22-04-2016 SAMA_RS18410 cc03402f389ba3b5ba980facb6b66b12 131 Gene3D G3DSA:3.10.180.10 1 128 1.5E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS18410 cc03402f389ba3b5ba980facb6b66b12 131 SUPERFAMILY SSF54593 2 130 3.86E-15 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 SUPERFAMILY SSF56935 28 308 1.68E-54 T 22-04-2016 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 3.8E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 300 308 3.8E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 92 102 3.8E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 146 157 3.8E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00184 Neisseria sp. porin signature 145 162 3.9E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00184 Neisseria sp. porin signature 90 109 3.9E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00184 Neisseria sp. porin signature 53 78 3.9E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 PRINTS PR00184 Neisseria sp. porin signature 235 261 3.9E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 Pfam PF13609 Gram-negative porin 13 289 3.3E-39 T 22-04-2016 SAMA_RS05625 14ec920989650fa4ca38afe0ff008bcb 308 Gene3D G3DSA:2.40.160.10 28 308 4.1E-51 T 22-04-2016 IPR023614 Porin domain SAMA_RS15715 879f844dead997367093da01074fee4c 380 Pfam PF08668 HDOD domain 132 249 1.4E-11 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS15715 879f844dead997367093da01074fee4c 380 SUPERFAMILY SSF109604 96 368 5.65E-14 T 22-04-2016 SAMA_RS15715 879f844dead997367093da01074fee4c 380 Gene3D G3DSA:1.10.3150.10 133 369 1.1E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 SUPERFAMILY SSF55166 1 156 2.33E-22 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 PANTHER PTHR34385:SF1 63 195 3.1E-46 T 22-04-2016 SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 PANTHER PTHR34385:SF1 1 44 3.1E-46 T 22-04-2016 SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 PANTHER PTHR34385 63 195 3.1E-46 T 22-04-2016 SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 PANTHER PTHR34385 1 44 3.1E-46 T 22-04-2016 SAMA_RS08600 bc416ee0bd203c54cdb4095898cea6d8 212 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 1 153 2.5E-34 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 255 456 3.0E-40 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 250 1.1E-85 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 SUPERFAMILY SSF51366 255 460 4.08E-45 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Gene3D G3DSA:3.20.20.70 258 461 2.4E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 PANTHER PTHR22854 1 280 1.7E-123 T 22-04-2016 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 253 462 29.353 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Gene3D G3DSA:3.20.20.70 1 257 2.4E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 PANTHER PTHR22854:SF2 1 280 1.7E-123 T 22-04-2016 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 48 66 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 252 32.487 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SAMA_RS11140 ae5c9bdb43490b2e40dece37f1e61329 462 SUPERFAMILY SSF51366 12 252 7.82E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 Hamap MF_00697 UPF0276 protein . 7 275 45.083 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 Gene3D G3DSA:3.20.20.150 6 271 1.1E-97 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 PANTHER PTHR42194:SF1 1 278 4.0E-123 T 22-04-2016 SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 Pfam PF05114 Protein of unknown function (DUF692) 7 267 2.8E-101 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 PANTHER PTHR42194 1 278 4.0E-123 T 22-04-2016 SAMA_RS06825 0ace32d7720cb7660ff9ad3fddb059a1 278 SUPERFAMILY SSF51658 25 205 2.3E-13 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 198 2.6E-23 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Gene3D G3DSA:3.40.50.1220 225 363 2.1E-19 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 SUPERFAMILY SSF52467 183 365 2.65E-22 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Gene3D G3DSA:3.40.50.970 372 564 1.2E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 SUPERFAMILY SSF52518 381 562 5.89E-24 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 225 333 1.2E-13 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 PANTHER PTHR18968 166 559 8.0E-35 T 22-04-2016 SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 PANTHER PTHR18968 1 150 8.0E-35 T 22-04-2016 SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 559 1.7E-11 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 Gene3D G3DSA:3.40.50.970 18 206 3.4E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS05345 041eb8d85bfab3a5f63b0334291e0214 605 SUPERFAMILY SSF52518 18 199 4.55E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 SUPERFAMILY SSF55681 151 497 1.49E-118 T 22-04-2016 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 Gene3D G3DSA:3.30.930.10 146 495 5.8E-121 T 22-04-2016 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 499 43.162 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 Pfam PF01336 OB-fold nucleic acid binding domain 65 135 3.3E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 6.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 6.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 6.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 6.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 6.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 496 1.5E-79 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 Gene3D G3DSA:2.40.50.140 9 143 2.2E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PANTHER PTHR22594 1 499 1.2E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 SUPERFAMILY SSF50249 6 144 2.11E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 PANTHER PTHR22594:SF4 1 499 1.2E-262 T 22-04-2016 SAMA_RS15020 b9f88a974ed8edc955ce1efe54bf2bd5 500 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 499 9.5E-200 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 PANTHER PTHR30341:SF0 1 386 3.7E-193 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 Pfam PF06965 Na+/H+ antiporter 1 7 380 8.5E-150 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.311 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 PANTHER PTHR30341 1 386 3.7E-193 T 22-04-2016 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 1.7E-165 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SAMA_RS04540 a59389343e0b9bf3da8877ad4dc53aca 391 Gene3D G3DSA:1.20.1530.10 4 383 7.5E-156 T 22-04-2016 IPR023171 Na/H antiporter domain SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 218 4.0E-68 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 SUPERFAMILY SSF53335 18 217 1.74E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 Gene3D G3DSA:3.40.50.150 16 216 3.3E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 215 1.1E-82 T 22-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 36.286 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 PANTHER PTHR10259 1 218 3.5E-103 T 22-04-2016 SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 PANTHER PTHR10259:SF16 1 218 3.5E-103 T 22-04-2016 SAMA_RS02895 e741ebefe487550925427439d25e2a07 218 PIRSF PIRSF023956 1 218 1.2E-70 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.018 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 Gene3D G3DSA:3.30.70.260 140 196 3.7E-30 T 22-04-2016 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 PANTHER PTHR11934:SF11 1 219 5.4E-146 T 22-04-2016 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.4E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 SUPERFAMILY SSF100950 1 146 6.28E-47 T 22-04-2016 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 PANTHER PTHR11934 1 219 5.4E-146 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 Gene3D G3DSA:3.40.50.1360 4 139 5.9E-58 T 22-04-2016 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 8.8E-70 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SAMA_RS14315 13c64ab46426a2253e112c89ad92c368 219 SUPERFAMILY SSF75445 127 198 2.35E-24 T 22-04-2016 SAMA_RS05075 dfe68e450b34c86a1e5eab9bb2735a22 419 PANTHER PTHR10590 1 416 5.6E-218 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS05075 dfe68e450b34c86a1e5eab9bb2735a22 419 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 416 1.6E-75 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS05075 dfe68e450b34c86a1e5eab9bb2735a22 419 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.3E-23 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS05075 dfe68e450b34c86a1e5eab9bb2735a22 419 Pfam PF07670 Nucleoside recognition 92 188 5.5E-8 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS05075 dfe68e450b34c86a1e5eab9bb2735a22 419 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 416 9.0E-154 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 Pfam PF00884 Sulfatase 285 555 5.6E-41 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 PIRSF PIRSF005091 13 633 1.3E-97 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 PANTHER PTHR10342:SF236 259 611 1.2E-85 T 22-04-2016 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 PANTHER PTHR10342 259 611 1.2E-85 T 22-04-2016 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 SUPERFAMILY SSF53649 283 607 3.4E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS18235 a6c3d71a3fd5bb3a6baa5912b640d965 646 Gene3D G3DSA:3.40.720.10 286 567 1.3E-39 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS07240 1be326b3096706977e3b72129ced96b2 146 PANTHER PTHR33452:SF1 1 145 2.2E-44 T 22-04-2016 SAMA_RS07240 1be326b3096706977e3b72129ced96b2 146 PANTHER PTHR33452 1 145 2.2E-44 T 22-04-2016 SAMA_RS07240 1be326b3096706977e3b72129ced96b2 146 Pfam PF07681 DoxX 17 103 3.2E-24 T 22-04-2016 IPR032808 DoxX family SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 PANTHER PTHR32332 1 80 6.8E-118 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 PANTHER PTHR32332 109 346 6.8E-118 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 PANTHER PTHR32332:SF12 1 80 6.8E-118 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 PANTHER PTHR32332:SF12 109 346 6.8E-118 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 Gene3D G3DSA:3.20.20.70 5 337 9.5E-56 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 SUPERFAMILY SSF51412 3 73 7.78E-55 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 SUPERFAMILY SSF51412 102 345 7.78E-55 T 22-04-2016 SAMA_RS14305 bf3d78e671ca66f2e9830cd1c95ae247 348 Pfam PF03060 Nitronate monooxygenase 4 342 1.2E-65 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 331 1.2E-107 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 SMART SM01329 5 331 2.3E-182 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 SUPERFAMILY SSF53659 3 335 2.52E-126 T 22-04-2016 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 PANTHER PTHR11835 3 336 6.4E-181 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SAMA_RS12660 e58f065e07b29e2ec8323add839e86a1 336 Gene3D G3DSA:3.40.718.10 2 335 5.5E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SAMA_RS03735 554b13e084ae7565df668e57563cb434 283 PANTHER PTHR35007:SF1 92 283 1.1E-44 T 22-04-2016 SAMA_RS03735 554b13e084ae7565df668e57563cb434 283 PANTHER PTHR35007 92 283 1.1E-44 T 22-04-2016 SAMA_RS03735 554b13e084ae7565df668e57563cb434 283 Pfam PF00482 Type II secretion system (T2SS), protein F 116 237 1.9E-17 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 PRINTS PR00050 Cold shock protein signature 43 61 3.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 PRINTS PR00050 Cold shock protein signature 28 37 3.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 PRINTS PR00050 Cold shock protein signature 8 23 3.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 SMART SM00357 7 70 4.0E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 PIRSF PIRSF002599 1 70 1.2E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 19 37 - T 22-04-2016 IPR019844 Cold-shock conserved site SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 PANTHER PTHR11544 7 70 6.6E-34 T 22-04-2016 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 Gene3D G3DSA:2.40.50.140 6 69 1.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 Pfam PF00313 'Cold-shock' DNA-binding domain 7 69 2.3E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SAMA_RS10245 afd4088b3475f7b60b959552b32c952c 70 SUPERFAMILY SSF50249 4 69 6.43E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 Gene3D G3DSA:3.40.50.360 1 193 2.1E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 PANTHER PTHR10204:SF16 1 193 1.2E-88 T 22-04-2016 SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 Pfam PF02525 Flavodoxin-like fold 3 192 1.8E-48 T 22-04-2016 IPR003680 Flavodoxin-like fold SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 SUPERFAMILY SSF52218 1 192 4.72E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 PANTHER PTHR10204 1 193 1.2E-88 T 22-04-2016 SAMA_RS17685 ade977031862602c79f8e67605f262a1 196 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 196 30.609 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 SAMA_RS09450 e75b97ef3bae64184602875484a02340 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 223 1.4E-57 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SAMA_RS09450 e75b97ef3bae64184602875484a02340 232 SUPERFAMILY SSF100950 9 226 9.07E-58 T 22-04-2016 SAMA_RS09450 e75b97ef3bae64184602875484a02340 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 224 8.0E-57 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SAMA_RS09450 e75b97ef3bae64184602875484a02340 232 Gene3D G3DSA:3.40.50.1360 8 230 3.8E-53 T 22-04-2016 SAMA_RS09450 e75b97ef3bae64184602875484a02340 232 PANTHER PTHR11054 10 219 9.9E-53 T 22-04-2016 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 SUPERFAMILY SSF82689 435 531 1.83E-33 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 Pfam PF00924 Mechanosensitive ion channel 329 521 1.9E-52 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 Gene3D G3DSA:2.30.30.60 382 430 9.2E-16 T 22-04-2016 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 SUPERFAMILY SSF50182 366 432 3.27E-17 T 22-04-2016 IPR010920 LSM domain SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 SUPERFAMILY SSF82861 279 365 2.75E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 PANTHER PTHR30221:SF7 278 530 1.6E-85 T 22-04-2016 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 PANTHER PTHR30221 278 530 1.6E-85 T 22-04-2016 SAMA_RS16395 9ee1e667ceadc1adbc62d274d1b8cd13 533 Gene3D G3DSA:3.30.70.100 436 519 1.5E-30 T 22-04-2016 SAMA_RS07690 9c1bf385505a59146f354cb838ca4541 358 PIRSF PIRSF005508 2 357 5.3E-133 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SAMA_RS07690 9c1bf385505a59146f354cb838ca4541 358 PANTHER PTHR10361 13 349 4.5E-140 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SAMA_RS07690 9c1bf385505a59146f354cb838ca4541 358 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 15 344 2.4E-134 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SAMA_RS07690 9c1bf385505a59146f354cb838ca4541 358 PANTHER PTHR10361:SF31 13 349 4.5E-140 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SAMA_RS07690 9c1bf385505a59146f354cb838ca4541 358 Pfam PF01758 Sodium Bile acid symporter family 60 256 9.4E-60 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SAMA_RS12480 972a48055ccf7ba7abd8ee67e7104a52 144 PANTHER PTHR12901:SF7 1 144 2.6E-59 T 22-04-2016 SAMA_RS12480 972a48055ccf7ba7abd8ee67e7104a52 144 Gene3D G3DSA:3.30.530.20 1 144 2.5E-45 T 22-04-2016 IPR023393 START-like domain SAMA_RS12480 972a48055ccf7ba7abd8ee67e7104a52 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 135 4.8E-31 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SAMA_RS12480 972a48055ccf7ba7abd8ee67e7104a52 144 SUPERFAMILY SSF55961 1 143 4.02E-34 T 22-04-2016 SAMA_RS12480 972a48055ccf7ba7abd8ee67e7104a52 144 PANTHER PTHR12901 1 144 2.6E-59 T 22-04-2016 SAMA_RS10790 614472d70dab6727c5a6c811de1f59a5 161 Gene3D G3DSA:2.30.270.10 94 154 2.5E-10 T 22-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain SAMA_RS10790 614472d70dab6727c5a6c811de1f59a5 161 Pfam PF06938 Protein of unknown function (DUF1285) 45 128 4.5E-11 T 22-04-2016 IPR010707 Protein of unknown function DUF1285 SAMA_RS10790 614472d70dab6727c5a6c811de1f59a5 161 Gene3D G3DSA:3.10.540.10 40 91 3.6E-16 T 22-04-2016 SAMA_RS08230 f79e324ead7165c6080223dd9691eaee 209 PANTHER PTHR30462 12 209 2.5E-79 T 22-04-2016 SAMA_RS08230 f79e324ead7165c6080223dd9691eaee 209 PANTHER PTHR30462:SF1 12 209 2.5E-79 T 22-04-2016 SAMA_RS08230 f79e324ead7165c6080223dd9691eaee 209 Pfam PF04403 Paraquat-inducible protein A 46 202 1.5E-46 T 22-04-2016 IPR007498 Paraquat-inducible protein A SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PANTHER PTHR33164 1 160 8.1E-35 T 22-04-2016 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 SUPERFAMILY SSF46785 11 159 2.23E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 9.2E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 9.2E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 9.2E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 9.2E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 SMART SM00347 44 145 6.7E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 Pfam PF01047 MarR family 51 110 1.2E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18530 321438b7214307d00429a45770593dc5 160 Gene3D G3DSA:1.10.10.10 8 160 4.5E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS18530 321438b7214307d00429a45770593dc5 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SAMA_RS18530 321438b7214307d00429a45770593dc5 160 PANTHER PTHR33164:SF4 1 160 8.1E-35 T 22-04-2016 SAMA_RS10540 5551369920c6b449b7832d55f4648b8e 147 PANTHER PTHR11527:SF145 1 145 4.1E-52 T 22-04-2016 SAMA_RS10540 5551369920c6b449b7832d55f4648b8e 147 SUPERFAMILY SSF49764 33 137 8.89E-19 T 22-04-2016 IPR008978 HSP20-like chaperone SAMA_RS10540 5551369920c6b449b7832d55f4648b8e 147 Gene3D G3DSA:2.60.40.790 21 137 8.6E-13 T 22-04-2016 IPR008978 HSP20-like chaperone SAMA_RS10540 5551369920c6b449b7832d55f4648b8e 147 Pfam PF00011 Hsp20/alpha crystallin family 45 137 4.0E-18 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SAMA_RS10540 5551369920c6b449b7832d55f4648b8e 147 PANTHER PTHR11527 1 145 4.1E-52 T 22-04-2016 IPR031107 Small heat shock protein HSP20 SAMA_RS10615 181888df489d27f265f62ba0d6e4a944 184 SUPERFAMILY SSF88697 1 182 3.98E-42 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS10615 181888df489d27f265f62ba0d6e4a944 184 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 127 6.7E-10 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SAMA_RS10615 181888df489d27f265f62ba0d6e4a944 184 SMART SM00464 2 179 0.0053 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 Pfam PF01026 TatD related DNase 8 258 6.9E-58 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 7 15 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 SUPERFAMILY SSF51556 7 259 2.61E-67 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 Gene3D G3DSA:3.20.20.140 4 259 3.4E-69 T 22-04-2016 SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 PIRSF PIRSF005902 1 260 6.5E-60 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS05070 5c9528f65909d0355c1e5b8ecbd95062 260 PANTHER PTHR10060 5 260 6.8E-69 T 22-04-2016 IPR001130 TatD family GO:0016788 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 PANTHER PTHR30586 1 220 8.9E-136 T 22-04-2016 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 1.4E-84 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.005 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 PANTHER PTHR30586:SF0 1 220 8.9E-136 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 PIRSF PIRSF006102 1 218 3.1E-76 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS09610 bb93f4137e72fa54b8518d6a879d6090 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 200 1.7E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SAMA_RS04285 be19512ab4a8c23696acebe7744c79c2 183 Pfam PF16036 Chalcone isomerase-like 50 177 2.1E-11 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 SAMA_RS13285 e9769d44519c22f00b75e24d90e5e9bd 206 PANTHER PTHR31573 21 205 1.8E-60 T 22-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 SAMA_RS13285 e9769d44519c22f00b75e24d90e5e9bd 206 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 197 6.4E-30 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SAMA_RS13285 e9769d44519c22f00b75e24d90e5e9bd 206 SUPERFAMILY SSF51197 18 200 2.2E-56 T 22-04-2016 SAMA_RS13285 e9769d44519c22f00b75e24d90e5e9bd 206 Gene3D G3DSA:2.60.120.590 19 200 1.0E-37 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SAMA_RS13285 e9769d44519c22f00b75e24d90e5e9bd 206 PANTHER PTHR31573:SF1 21 205 1.8E-60 T 22-04-2016 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 2.4E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 PANTHER PTHR22573:SF15 2 448 1.1E-165 T 22-04-2016 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 1.2E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.2E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.2E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 369 5.7E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 131 7.3E-44 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 447 1.1E-188 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 SUPERFAMILY SSF53738 2 170 4.71E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Gene3D G3DSA:3.40.120.10 255 371 1.4E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 PANTHER PTHR22573 2 448 1.1E-165 T 22-04-2016 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Gene3D G3DSA:3.30.310.50 373 448 1.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Gene3D G3DSA:3.40.120.10 180 254 1.2E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 SUPERFAMILY SSF53738 262 369 2.75E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 SUPERFAMILY SSF53738 160 261 2.0E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 SUPERFAMILY SSF55957 363 450 1.31E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 449 46.806 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 446 2.1E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS11755 711b64de229b08917636c4da18ac1fc4 452 Gene3D G3DSA:3.40.120.10 3 155 2.6E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SAMA_RS03645 2373bee14a1024f6be428d8364287112 381 PANTHER PTHR30590:SF2 1 381 3.0E-64 T 22-04-2016 SAMA_RS03645 2373bee14a1024f6be428d8364287112 381 Pfam PF04235 Protein of unknown function (DUF418) 216 368 9.0E-31 T 22-04-2016 IPR007349 Domain of unknown function DUF418 SAMA_RS03645 2373bee14a1024f6be428d8364287112 381 PANTHER PTHR30590 1 381 3.0E-64 T 22-04-2016 SAMA_RS00545 94fe95ba1a180fb13e5566d733bb38e6 124 Gene3D G3DSA:3.40.50.1000 1 122 1.6E-42 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00545 94fe95ba1a180fb13e5566d733bb38e6 124 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 2.5E-6 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00545 94fe95ba1a180fb13e5566d733bb38e6 124 SUPERFAMILY SSF56784 1 109 1.41E-25 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00545 94fe95ba1a180fb13e5566d733bb38e6 124 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 123 5.5E-64 T 22-04-2016 IPR010039 Capsule biosynthesis phosphatase SAMA_RS16250 f7d715048779b90512b1b11e6b0534fe 292 Pfam PF11231 Protein of unknown function (DUF3034) 42 288 1.4E-106 T 22-04-2016 IPR021393 Protein of unknown function DUF3034 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 PANTHER PTHR11264 6 221 3.7E-134 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 Pfam PF03167 Uracil DNA glycosylase superfamily 53 208 1.6E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 220 38.816 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 SMART SM00987 48 209 4.7E-43 T 22-04-2016 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 SMART SM00986 48 209 4.7E-43 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 56 65 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 6.1E-82 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 SUPERFAMILY SSF52141 6 221 3.71E-90 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS14790 7a8aab99c55659a8252fbe1bdc8b6151 221 Gene3D G3DSA:3.40.470.10 5 221 1.7E-96 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 Gene3D G3DSA:3.30.420.10 3 156 2.5E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PANTHER PTHR30194 1 169 3.3E-73 T 22-04-2016 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.0E-61 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 SUPERFAMILY SSF53098 3 156 1.31E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.581 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.0E-39 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.0E-39 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.0E-39 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.0E-39 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.0E-39 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS09640 73c432b12fc7981a47331f6f28f5009e 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.6E-65 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 612 44.762 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 511 522 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 Pfam PF00920 Dehydratase family 34 609 6.9E-216 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 SUPERFAMILY SSF143975 3 422 1.15E-132 T 22-04-2016 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 612 1.5E-253 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 SUPERFAMILY SSF52016 423 613 3.22E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 PANTHER PTHR21000 1 373 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 PANTHER PTHR21000 408 618 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 PANTHER PTHR21000:SF11 1 373 0.0 T 22-04-2016 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 PANTHER PTHR21000:SF11 408 618 0.0 T 22-04-2016 SAMA_RS17085 f99084767f0f1c55c4229b22822b08eb 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PANTHER PTHR24423 1 15 4.5E-68 T 22-04-2016 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PANTHER PTHR24423 183 448 4.5E-68 T 22-04-2016 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 9.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 9.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 9.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PANTHER PTHR24423:SF496 1 15 4.5E-68 T 22-04-2016 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 PANTHER PTHR24423:SF496 183 448 4.5E-68 T 22-04-2016 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 SUPERFAMILY SSF55874 294 449 1.57E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 SMART SM00387 344 449 5.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 Pfam PF02520 Domain of unknown function DUF148 222 287 7.8E-6 T 22-04-2016 IPR003677 Domain of unknown function DUF148 SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 Gene3D G3DSA:3.30.565.10 306 449 1.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS08035 35f96e832f7019dc347ac97e50bbc8e8 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 449 6.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 SUPERFAMILY SSF69593 4 138 4.58E-22 T 22-04-2016 SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 SMART SM00563 28 140 1.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 PANTHER PTHR10434 1 156 6.8E-55 T 22-04-2016 SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 PANTHER PTHR10434:SF9 1 156 6.8E-55 T 22-04-2016 SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 Pfam PF01553 Acyltransferase 27 136 1.6E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS18855 ddb078e031760dc51fd41c7b6443cd2d 183 Gene3D G3DSA:3.40.1130.10 2 137 7.3E-8 T 22-04-2016 SAMA_RS12950 b71dc6d24a01cc3496fd5c62e58fb9f0 144 Pfam PF14467 Domain of unknown function (DUF4426) 25 144 4.6E-47 T 22-04-2016 IPR025218 Domain of unknown function DUF4426 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 SUPERFAMILY SSF118352 220 278 4.19E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 Gene3D G3DSA:3.90.1280.10 221 278 2.7E-22 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 279 31.575 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 PIRSF PIRSF005261 1 278 8.7E-72 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 Gene3D G3DSA:3.55.30.10 2 171 1.2E-62 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 SUPERFAMILY SSF64397 4 227 4.97E-75 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 Gene3D G3DSA:1.10.287.480 174 220 3.0E-22 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 PANTHER PTHR30111:SF1 1 283 1.5E-74 T 22-04-2016 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 PANTHER PTHR30111 1 283 1.5E-74 T 22-04-2016 SAMA_RS00840 1524a00e85f95788e8f371617f54f5fd 289 Pfam PF01430 Hsp33 protein 4 268 5.1E-84 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 Pfam PF02021 Uncharacterised protein family UPF0102 2 85 1.3E-21 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 SUPERFAMILY SSF52980 2 95 1.09E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 Gene3D G3DSA:3.40.1350.10 2 97 3.6E-31 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 PANTHER PTHR34039:SF1 2 97 8.9E-31 T 22-04-2016 SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 97 2.9E-24 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SAMA_RS17465 bf234783731ee23ba9bbd415cb8bc9a1 97 PANTHER PTHR34039 2 97 8.9E-31 T 22-04-2016 SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 SUPERFAMILY SSF48452 187 243 2.68E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 PANTHER PTHR31350 43 259 8.9E-25 T 22-04-2016 SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 PANTHER PTHR31350:SF1 43 259 8.9E-25 T 22-04-2016 SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 Pfam PF13369 Transglutaminase-like superfamily 50 178 4.1E-25 T 22-04-2016 IPR032698 Protein SirB1, N-terminal SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 Pfam PF13371 Tetratricopeptide repeat 180 252 1.6E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13365 6bfcc332deb1b59dbd62613291ded531 262 Gene3D G3DSA:1.25.40.10 187 243 3.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12770 7eeebfbfff3c74924c5ca810ba209d3f 443 PANTHER PTHR11206 7 443 2.4E-119 T 22-04-2016 SAMA_RS12770 7eeebfbfff3c74924c5ca810ba209d3f 443 PANTHER PTHR11206:SF132 7 443 2.4E-119 T 22-04-2016 SAMA_RS12770 7eeebfbfff3c74924c5ca810ba209d3f 443 PIRSF PIRSF006603 1 442 1.2E-59 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS12770 7eeebfbfff3c74924c5ca810ba209d3f 443 Pfam PF01554 MatE 244 401 7.4E-14 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS12770 7eeebfbfff3c74924c5ca810ba209d3f 443 Pfam PF01554 MatE 22 183 2.1E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 4.8E-54 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 PANTHER PTHR31223:SF12 83 339 7.1E-174 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 PANTHER PTHR31223:SF12 356 381 7.1E-174 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 Pfam PF03641 Possible lysine decarboxylase 187 326 2.2E-31 T 22-04-2016 IPR031100 LOG family SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 Gene3D G3DSA:3.30.1850.10 1 112 1.4E-52 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 Gene3D G3DSA:3.40.50.450 123 449 2.6E-115 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 PANTHER PTHR31223 83 339 7.1E-174 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 PANTHER PTHR31223 356 381 7.1E-174 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 SUPERFAMILY SSF102405 117 327 1.04E-40 T 22-04-2016 SAMA_RS12640 5bbb5f881441dfef25ec22754632da7c 451 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 2.0E-48 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 122 6.3E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 Pfam PF03061 Thioesterase superfamily 56 133 6.0E-12 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 SUPERFAMILY SSF54637 6 146 3.56E-26 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 Gene3D G3DSA:3.10.129.10 16 147 2.8E-25 T 22-04-2016 IPR029069 HotDog domain SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 PANTHER PTHR12418:SF28 16 159 9.0E-51 T 22-04-2016 SAMA_RS07540 45f2e589604ed33a2d6313ce154b41df 159 PANTHER PTHR12418 16 159 9.0E-51 T 22-04-2016 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 Gene3D G3DSA:3.30.1370.30 2 73 6.1E-28 T 22-04-2016 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 Gene3D G3DSA:3.30.1490.10 75 130 6.8E-28 T 22-04-2016 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 Pfam PF00410 Ribosomal protein S8 5 130 1.6E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 PANTHER PTHR11758 1 131 4.5E-61 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 SUPERFAMILY SSF56047 2 130 1.44E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SAMA_RS01195 6d1d5f8a07b668aa8ad15e541f8cf3bc 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 31.885 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.147 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 Gene3D G3DSA:3.20.20.70 3 230 4.7E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 SMART SM00934 5 226 2.5E-98 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 226 6.7E-57 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 PANTHER PTHR32119:SF2 1 233 1.3E-119 T 22-04-2016 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 PANTHER PTHR32119 1 233 1.3E-119 T 22-04-2016 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 224 1.0E-54 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SAMA_RS09070 1d96debcd334862c61f439435473305c 233 SUPERFAMILY SSF51366 3 229 5.82E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 Gene3D G3DSA:3.40.190.10 90 197 4.4E-44 T 22-04-2016 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 PANTHER PTHR30579:SF2 1 297 3.1E-131 T 22-04-2016 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 Gene3D G3DSA:1.10.10.10 2 84 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15585 7f707325897cd282eed814051f93765f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 9.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 SUPERFAMILY SSF46785 1 110 1.53E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15585 7f707325897cd282eed814051f93765f 299 PANTHER PTHR30579 1 297 3.1E-131 T 22-04-2016 SAMA_RS15585 7f707325897cd282eed814051f93765f 299 Pfam PF03466 LysR substrate binding domain 92 270 1.3E-6 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS15585 7f707325897cd282eed814051f93765f 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 293 5.6E-112 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP SAMA_RS15585 7f707325897cd282eed814051f93765f 299 SUPERFAMILY SSF53850 91 290 7.06E-17 T 22-04-2016 SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 SUPERFAMILY SSF47175 21 145 4.71E-40 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 Gene3D G3DSA:1.20.120.10 21 147 9.2E-43 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 Pfam PF01322 Cytochrome C' 26 145 1.3E-38 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 PIRSF PIRSF000027 5 147 1.1E-43 T 22-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 PRINTS PR00608 Class II cytochrome C signature 111 134 3.1E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup SAMA_RS04705 429ea92871a078bd75e15ad3c48b93df 147 PRINTS PR00608 Class II cytochrome C signature 134 145 3.1E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 SUPERFAMILY SSF53681 118 228 1.96E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 Gene3D G3DSA:3.40.50.1860 113 216 2.4E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 230 3.5E-75 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.9E-61 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 PANTHER PTHR21198:SF7 1 225 6.3E-82 T 22-04-2016 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 Gene3D G3DSA:3.40.50.1860 2 112 1.7E-43 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 SUPERFAMILY SSF53681 2 116 1.67E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS15065 69eec447e051721bf3f908cfb8fdfa33 230 PANTHER PTHR21198 1 225 6.3E-82 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 PANTHER PTHR30386 12 336 6.6E-86 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 Pfam PF00529 HlyD membrane-fusion protein of T1SS 65 335 8.8E-10 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 Gene3D G3DSA:2.40.50.100 45 75 1.6E-15 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 Gene3D G3DSA:2.40.50.100 206 239 1.6E-15 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 SUPERFAMILY SSF111369 180 281 2.48E-10 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 PANTHER PTHR30386:SF7 12 336 6.6E-86 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 SUPERFAMILY SSF111369 42 129 1.83E-6 T 22-04-2016 SAMA_RS02175 7b38092fd1aff33f8e7f063094f3dca4 348 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 38 285 4.1E-20 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS05225 9047990e3a4f1138ec53e122b1cc393f 358 Pfam PF11168 Protein of unknown function (DUF2955) 24 163 7.5E-30 T 22-04-2016 IPR022604 Protein of unknown function DUF2955 SAMA_RS19165 451687d8fe17a96107069349c90f6ef5 167 Pfam PF14316 Domain of unknown function (DUF4381) 3 148 4.0E-38 T 22-04-2016 IPR025489 Protein of unknown function (DUF4381 SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 Pfam PF00072 Response regulator receiver domain 130 227 1.9E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 Pfam PF00486 Transcriptional regulatory protein, C terminal 2 65 9.4E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 SUPERFAMILY SSF46894 2 66 3.12E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 Gene3D G3DSA:3.40.50.2300 129 261 2.8E-13 T 22-04-2016 SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 SUPERFAMILY SSF52172 128 242 2.56E-14 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS19050 b411f36e3e13684e927f15a8a4cea497 266 Gene3D G3DSA:1.10.10.10 2 68 3.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 SUPERFAMILY SSF55315 1 78 4.47E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 Gene3D G3DSA:3.30.1330.30 1 78 1.9E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 Pfam PF00588 SpoU rRNA Methylase family 98 238 1.6E-37 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 PANTHER PTHR12029 4 245 6.5E-75 T 22-04-2016 SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.678 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 SMART SM00967 6 82 2.1E-17 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 8.9E-83 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 SUPERFAMILY SSF75217 70 245 2.35E-47 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.0E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SAMA_RS16000 f81b43dad9fbde0ae48bf9468828a4e0 246 Gene3D G3DSA:3.40.1280.10 93 244 3.0E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 SUPERFAMILY SSF47240 1 154 2.78E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PANTHER PTHR30295:SF9 1 155 1.2E-48 T 22-04-2016 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 Pfam PF00210 Ferritin-like domain 9 143 9.0E-37 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PIRSF PIRSF002560 1 156 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 Gene3D G3DSA:1.20.1260.10 1 155 6.8E-58 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PANTHER PTHR30295 1 155 1.2E-48 T 22-04-2016 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 107 127 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 86 106 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 128 149 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 65 85 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS13200 01eb343794c8cc99671e0d506950a11a 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.1E-70 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 SUPERFAMILY SSF51197 4 276 4.94E-60 T 22-04-2016 SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 PANTHER PTHR10209 1 275 6.3E-68 T 22-04-2016 SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 7.4E-15 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 10 94 2.8E-8 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 Gene3D G3DSA:2.60.120.330 2 261 2.7E-58 T 22-04-2016 IPR027443 Isopenicillin N synthase-like SAMA_RS10400 a6174549d14dbdf102216f124a933c97 279 PANTHER PTHR10209:SF146 1 275 6.3E-68 T 22-04-2016 SAMA_RS11430 a1759ea13d1fdd156b02b483d606bcef 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 77 96 - T 22-04-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 SAMA_RS11430 a1759ea13d1fdd156b02b483d606bcef 105 Pfam PF09413 Putative prokaryotic signal transducing protein 5 65 8.1E-10 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 SAMA_RS17445 be0cd2bb672603d5963d0b1a2797c04f 406 Pfam PF06738 Putative threonine/serine exporter 11 250 4.0E-64 T 22-04-2016 IPR010619 Putative threonine/serine exporter SAMA_RS17445 be0cd2bb672603d5963d0b1a2797c04f 406 Pfam PF12821 Threonine/Serine exporter, ThrE 275 398 3.8E-13 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE SAMA_RS17445 be0cd2bb672603d5963d0b1a2797c04f 406 PANTHER PTHR31082 4 403 9.1E-99 T 22-04-2016 SAMA_RS08235 91db545ed209e05e43937ca8276cd436 208 PANTHER PTHR30462 1 206 8.1E-63 T 22-04-2016 SAMA_RS08235 91db545ed209e05e43937ca8276cd436 208 Pfam PF04403 Paraquat-inducible protein A 49 206 3.9E-37 T 22-04-2016 IPR007498 Paraquat-inducible protein A SAMA_RS08235 91db545ed209e05e43937ca8276cd436 208 PANTHER PTHR30462:SF3 1 206 8.1E-63 T 22-04-2016 SAMA_RS02985 88f475cb3c13bc7f719c251e1af18dfa 389 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 30 380 4.2E-90 T 22-04-2016 SAMA_RS02985 88f475cb3c13bc7f719c251e1af18dfa 389 Gene3D G3DSA:1.50.10.10 6 386 2.0E-109 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SAMA_RS02985 88f475cb3c13bc7f719c251e1af18dfa 389 SUPERFAMILY SSF48208 3 386 2.77E-111 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS02985 88f475cb3c13bc7f719c251e1af18dfa 389 PANTHER PTHR15108 1 388 8.9E-70 T 22-04-2016 SAMA_RS16415 7725b190b574cc2b7c97e850a33c77a1 256 PANTHER PTHR10108:SF919 1 156 2.1E-29 T 22-04-2016 SAMA_RS16415 7725b190b574cc2b7c97e850a33c77a1 256 PANTHER PTHR10108 1 156 2.1E-29 T 22-04-2016 SAMA_RS16415 7725b190b574cc2b7c97e850a33c77a1 256 Gene3D G3DSA:3.40.50.150 33 255 2.5E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16415 7725b190b574cc2b7c97e850a33c77a1 256 SUPERFAMILY SSF53335 4 255 1.69E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16415 7725b190b574cc2b7c97e850a33c77a1 256 Pfam PF08241 Methyltransferase domain 49 146 9.8E-16 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 PANTHER PTHR30126 6 296 4.5E-133 T 22-04-2016 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 SUPERFAMILY SSF53850 93 291 2.71E-21 T 22-04-2016 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 SUPERFAMILY SSF46785 7 91 6.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 PANTHER PTHR30126:SF19 6 296 4.5E-133 T 22-04-2016 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 Pfam PF03466 LysR substrate binding domain 112 286 5.3E-18 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 Gene3D G3DSA:3.40.190.10 111 181 1.3E-5 T 22-04-2016 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 Gene3D G3DSA:3.40.190.10 182 257 1.4E-7 T 22-04-2016 SAMA_RS09695 00134ef65a4c72275a904ca698eedaf2 301 Gene3D G3DSA:1.10.10.10 7 85 1.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 SMART SM00562 3 140 8.7E-87 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.7E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.7E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.7E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.7E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.7E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 Gene3D G3DSA:3.30.70.141 1 140 9.7E-59 T 22-04-2016 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.3E-56 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 PANTHER PTHR11349 1 143 6.7E-76 T 22-04-2016 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 SUPERFAMILY SSF54919 1 140 1.83E-58 T 22-04-2016 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.391 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS06805 64e54eb7155595ee5344d501dc022671 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 Gene3D G3DSA:2.40.50.140 27 132 1.4E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 PANTHER PTHR34128 1 158 8.0E-70 T 22-04-2016 SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 PANTHER PTHR34128:SF1 1 158 8.0E-70 T 22-04-2016 SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 SUPERFAMILY SSF82093 30 144 6.8E-39 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 31.79 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SAMA_RS01260 e02f36abc3ee895deda7dca15e4ec8e9 162 Pfam PF03100 CcmE 4 138 1.5E-42 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 SUPERFAMILY SSF55826 2 155 2.62E-38 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.2E-50 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 PIRSF PIRSF006181 1 157 5.1E-45 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 8.7E-19 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 Gene3D G3DSA:3.90.960.10 1 156 1.9E-50 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 PANTHER PTHR30411 1 156 2.0E-57 T 22-04-2016 SAMA_RS02835 d0e1bbab4631a71b3a174519c62723d6 157 PANTHER PTHR30411:SF0 1 156 2.0E-57 T 22-04-2016 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 Pfam PF02687 FtsX-like permease family 313 428 1.3E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 PANTHER PTHR30572:SF5 1 223 1.5E-154 T 22-04-2016 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 PANTHER PTHR30572:SF5 245 435 1.5E-154 T 22-04-2016 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 PANTHER PTHR30572 1 223 1.5E-154 T 22-04-2016 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 PANTHER PTHR30572 245 435 1.5E-154 T 22-04-2016 SAMA_RS14950 bdc04618514e896586290895e5a83a5a 435 Pfam PF12704 MacB-like periplasmic core domain 20 266 7.2E-21 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SAMA_RS07905 4dda850c1391be374f2b485399aa73ff 271 Gene3D G3DSA:3.40.50.720 3 78 2.8E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07905 4dda850c1391be374f2b485399aa73ff 271 Gene3D G3DSA:3.40.50.720 95 225 6.3E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS07905 4dda850c1391be374f2b485399aa73ff 271 SUPERFAMILY SSF51735 5 259 3.18E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 PANTHER PTHR23117 1 188 5.7E-100 T 22-04-2016 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Gene3D G3DSA:3.40.50.300 88 201 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Gene3D G3DSA:3.40.50.300 3 20 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 37.731 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Pfam PF00625 Guanylate kinase 6 185 3.4E-62 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Gene3D G3DSA:3.30.63.10 42 87 2.0E-29 T 22-04-2016 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 2.5E-75 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 SMART SM00072 4 187 9.2E-72 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 SUPERFAMILY SSF52540 3 186 2.83E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 PANTHER PTHR23117:SF13 1 188 5.7E-100 T 22-04-2016 SAMA_RS01435 8b725bd0f559158daaae774570b63fca 207 Gene3D G3DSA:3.40.50.300 21 41 6.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 Gene3D G3DSA:1.10.1740.10 21 116 5.8E-23 T 22-04-2016 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 Pfam PF08281 Sigma-70, region 4 121 172 7.7E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 176 2.6E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 PANTHER PTHR30173:SF6 22 180 6.0E-50 T 22-04-2016 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 SUPERFAMILY SSF88659 114 177 9.53E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 PANTHER PTHR30173 22 180 6.0E-50 T 22-04-2016 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 SUPERFAMILY SSF88946 22 111 3.1E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 Pfam PF04542 Sigma-70 region 2 28 94 2.4E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11360 b48e7de9e81b765fe5cf3417c217cc0a 187 Gene3D G3DSA:1.10.10.10 117 178 6.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 SUPERFAMILY SSF69304 455 691 2.22E-16 T 22-04-2016 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 SUPERFAMILY SSF46894 2 102 5.67E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 SUPERFAMILY SSF82171 217 527 7.26E-38 T 22-04-2016 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 100 7.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 PANTHER PTHR26402 5 104 2.0E-18 T 22-04-2016 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 SMART SM00862 27 100 1.3E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Gene3D G3DSA:2.120.10.30 468 713 4.1E-19 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Gene3D G3DSA:2.120.10.30 208 460 3.4E-35 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Pfam PF07676 WD40-like Beta Propeller Repeat 482 515 0.0017 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Pfam PF07676 WD40-like Beta Propeller Repeat 211 233 0.013 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 PANTHER PTHR26402:SF514 5 104 2.0E-18 T 22-04-2016 SAMA_RS03225 d6667d89c5259da1e9a94c3ef4ba38ed 729 Gene3D G3DSA:1.10.10.10 4 103 3.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14545 7c36fda485835dcbcb5696dfe47dfaac 309 PANTHER PTHR39430 16 305 2.3E-22 T 22-04-2016 SAMA_RS14545 7c36fda485835dcbcb5696dfe47dfaac 309 Pfam PF02517 CAAX protease self-immunity 129 225 4.0E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SAMA_RS17800 d98cf77cfc0827c6b2b6f7991c3c9b80 208 Gene3D G3DSA:3.40.50.880 1 203 3.6E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS17800 d98cf77cfc0827c6b2b6f7991c3c9b80 208 SUPERFAMILY SSF52317 25 163 2.79E-19 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS17800 d98cf77cfc0827c6b2b6f7991c3c9b80 208 Pfam PF03575 Peptidase family S51 35 197 5.3E-19 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PANTHER PTHR19375 19 609 0.0 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.30.420.40 201 238 3.5E-30 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.30.420.40 317 359 3.5E-30 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PANTHER PTHR19375:SF176 19 609 0.0 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 211 221 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 363 383 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 152 172 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 469 485 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 332 348 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 PRINTS PR00301 70kDa heat shock protein signature 388 407 7.3E-57 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 6.5E-266 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 SUPERFAMILY SSF100934 507 617 3.73E-37 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 SUPERFAMILY SSF100920 387 538 4.58E-50 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Pfam PF00012 Hsp70 protein 21 603 4.3E-187 T 22-04-2016 IPR013126 Heat shock protein 70 family SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 44.709 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 SUPERFAMILY SSF53067 19 196 4.81E-49 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 SUPERFAMILY SSF53067 200 380 2.41E-48 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:1.20.1270.10 531 617 1.2E-31 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.30.30.30 88 128 5.0E-7 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:2.60.34.10 390 530 9.9E-53 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.90.640.10 239 312 2.5E-5 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.30.420.40 19 87 5.6E-53 T 22-04-2016 SAMA_RS06790 f6b3a9c7a4f0faaf6959ab0f57986bc7 619 Gene3D G3DSA:3.30.420.40 129 200 5.6E-53 T 22-04-2016 SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 SMART SM00460 417 488 1.5E-20 T 22-04-2016 IPR002931 Transglutaminase-like SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 Pfam PF11992 Domain of unknown function (DUF3488) 18 341 5.3E-91 T 22-04-2016 IPR021878 Protein of unknown function DUF3488 SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 Pfam PF13559 Domain of unknown function (DUF4129) 602 668 5.3E-9 T 22-04-2016 IPR025403 Domain of unknown function DUF4129 SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 PANTHER PTHR33490:SF4 12 629 2.2E-92 T 22-04-2016 SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 Pfam PF01841 Transglutaminase-like superfamily 371 486 2.0E-26 T 22-04-2016 IPR002931 Transglutaminase-like SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 Gene3D G3DSA:3.90.260.10 311 571 7.0E-47 T 22-04-2016 IPR002931 Transglutaminase-like SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 PANTHER PTHR33490 12 629 2.2E-92 T 22-04-2016 SAMA_RS09940 db940078a8f1f08a76284e643f08a0dd 689 SUPERFAMILY SSF54001 292 621 9.53E-72 T 22-04-2016 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 170 6.9E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 Gene3D G3DSA:2.40.170.20 283 899 2.4E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 Gene3D G3DSA:2.40.170.20 174 233 2.4E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 PANTHER PTHR30069:SF7 19 805 1.1E-126 T 22-04-2016 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 Pfam PF00593 TonB dependent receptor 576 893 5.4E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 SUPERFAMILY SSF56935 395 899 2.78E-101 T 22-04-2016 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 SUPERFAMILY SSF56935 40 235 2.78E-101 T 22-04-2016 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 SUPERFAMILY SSF56935 301 349 2.78E-101 T 22-04-2016 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 Gene3D G3DSA:2.170.130.10 31 173 1.1E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07820 9987f0bc4ff3b2c54a4e59aac6188ee5 899 PANTHER PTHR30069 19 805 1.1E-126 T 22-04-2016 SAMA_RS14875 e6f846874a2b34764ba1bdb7fd4f3765 246 PANTHER PTHR40053 1 220 3.2E-51 T 22-04-2016 SAMA_RS14875 e6f846874a2b34764ba1bdb7fd4f3765 246 Pfam PF07070 SpoOM protein 2 217 1.5E-69 T 22-04-2016 IPR009776 Sporulation stage 0, protein M SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 SUPERFAMILY SSF55073 396 540 7.85E-27 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 PANTHER PTHR10799 259 371 7.7E-14 T 22-04-2016 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 PANTHER PTHR10799 424 548 7.7E-14 T 22-04-2016 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 PANTHER PTHR10799:SF710 259 371 7.7E-14 T 22-04-2016 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 PANTHER PTHR10799:SF710 424 548 7.7E-14 T 22-04-2016 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 Pfam PF07695 7TM diverse intracellular signalling 174 368 1.6E-27 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 540 1.8E-25 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 Gene3D G3DSA:3.30.70.270 393 544 3.6E-29 T 22-04-2016 SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 SMART SM00267 377 545 6.8E-29 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS05680 d9e8c54a41046657030a43567f26f324 549 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 544 4.2E-25 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 Pfam PF02565 Recombination protein O C terminal 78 215 3.4E-12 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 Pfam PF11967 Recombination protein O N terminal 2 69 1.6E-14 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 SUPERFAMILY SSF50249 3 70 9.08E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 Hamap MF_00201 DNA repair protein RecO [recO]. 1 222 16.536 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 PANTHER PTHR33991 1 221 3.7E-42 T 22-04-2016 SAMA_RS04610 af4240be80ad462e5c0c00e18d91df6f 224 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 144 4.9E-19 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 PIRSF PIRSF006060 1 436 5.1E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 PANTHER PTHR11785:SF341 2 429 2.3E-214 T 22-04-2016 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 430 9.6E-228 T 22-04-2016 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 Pfam PF13520 Amino acid permease 8 403 4.4E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 PANTHER PTHR11785 2 429 2.3E-214 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SAMA_RS17365 5ee7900ab144cced083ec85583c69f9e 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 2.4E-134 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 PANTHER PTHR33751:SF3 29 203 8.9E-56 T 22-04-2016 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 SUPERFAMILY SSF46626 120 203 3.35E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 PIRSF PIRSF000005 3 204 4.5E-59 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 Gene3D G3DSA:1.10.760.10 32 133 3.5E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 PANTHER PTHR33751 29 203 8.9E-56 T 22-04-2016 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 Gene3D G3DSA:1.10.760.10 134 203 1.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 SUPERFAMILY SSF46626 16 99 1.09E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 Pfam PF00034 Cytochrome c 135 204 2.0E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS02820 0a63f437505486df176d5c5243fa1d0b 204 Pfam PF00034 Cytochrome c 33 85 6.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS18820 4e7e2d15305913a8f881808f50cd359c 187 PANTHER PTHR38683 2 183 1.4E-48 T 22-04-2016 SAMA_RS18820 4e7e2d15305913a8f881808f50cd359c 187 Pfam PF04345 Chorismate lyase 14 177 1.4E-29 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SAMA_RS18820 4e7e2d15305913a8f881808f50cd359c 187 Gene3D G3DSA:3.40.1410.10 9 180 1.2E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SAMA_RS18820 4e7e2d15305913a8f881808f50cd359c 187 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 14 182 27.42 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SAMA_RS18820 4e7e2d15305913a8f881808f50cd359c 187 SUPERFAMILY SSF64288 8 182 2.86E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 PANTHER PTHR10031 10 77 1.6E-20 T 22-04-2016 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 75 7.0E-30 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 Gene3D G3DSA:1.20.20.10 2 78 8.8E-32 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 Pfam PF00137 ATP synthase subunit C 10 73 1.1E-8 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 PRINTS PR00124 ATP synthase C subunit signature 49 74 7.2E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 PRINTS PR00124 ATP synthase C subunit signature 11 30 7.2E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 PRINTS PR00124 ATP synthase C subunit signature 32 47 7.2E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 SUPERFAMILY SSF81333 3 77 1.18E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.691 T 22-04-2016 SAMA_RS18970 bed7bdbb8e48885e7bed682e77e846a1 83 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 SUPERFAMILY SSF54534 2 140 4.91E-35 T 22-04-2016 SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 PANTHER PTHR10516 1 83 3.2E-55 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 PANTHER PTHR10516 129 202 3.2E-55 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 PANTHER PTHR10516:SF316 1 83 3.2E-55 T 22-04-2016 SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 PANTHER PTHR10516:SF316 129 202 3.2E-55 T 22-04-2016 SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 Gene3D G3DSA:3.10.50.40 2 80 2.4E-16 T 22-04-2016 SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 Gene3D G3DSA:3.10.50.40 126 140 2.4E-16 T 22-04-2016 SAMA_RS04720 55ff3d0919117cfa648bd17e64ba2a04 203 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 102 2.1E-10 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 Pfam PF12848 ABC transporter 217 294 5.0E-27 T 22-04-2016 IPR032781 ABC-transporter extension domain SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 SUPERFAMILY SSF52540 3 92 1.52E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 SUPERFAMILY SSF52540 119 247 1.52E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 Gene3D G3DSA:3.40.50.300 310 536 3.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 PANTHER PTHR19211:SF49 1 555 0.0 T 22-04-2016 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 SMART SM00382 26 223 7.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 SMART SM00382 337 503 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 Gene3D G3DSA:3.40.50.300 11 275 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 SUPERFAMILY SSF52540 294 513 5.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 Pfam PF00005 ABC transporter 330 459 3.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS15630 86bc136532ef9d786a50c4d76ea91cc5 635 Pfam PF00005 ABC transporter 17 178 9.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS12580 8ccf884ea665a749fb69752facd98feb 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 8.5E-84 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SAMA_RS12580 8ccf884ea665a749fb69752facd98feb 347 SUPERFAMILY SSF51395 3 338 8.25E-103 T 22-04-2016 SAMA_RS12580 8ccf884ea665a749fb69752facd98feb 347 Gene3D G3DSA:3.20.20.70 2 339 3.5E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS12580 8ccf884ea665a749fb69752facd98feb 347 PANTHER PTHR22893:SF55 1 336 3.8E-210 T 22-04-2016 SAMA_RS12580 8ccf884ea665a749fb69752facd98feb 347 PANTHER PTHR22893 1 336 3.8E-210 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 SUPERFAMILY SSF56801 18 555 1.24E-150 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Gene3D G3DSA:3.30.300.30 456 553 2.7E-28 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Gene3D G3DSA:3.40.50.980 185 216 3.4E-41 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Gene3D G3DSA:3.40.50.980 24 152 3.4E-41 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 5.6E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Gene3D G3DSA:3.40.50.980 217 379 2.1E-41 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Pfam PF00501 AMP-binding enzyme 29 461 3.9E-109 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 PANTHER PTHR24096 176 553 1.1E-174 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 PANTHER PTHR24096 22 153 1.1E-174 T 22-04-2016 SAMA_RS10115 7d69c287b5eb1d7815fc665aad33fd22 558 Gene3D G3DSA:2.30.38.10 380 452 4.8E-29 T 22-04-2016 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 SUPERFAMILY SSF52540 4 285 1.65E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PRINTS PR00478 Phosphoribulokinase family signature 164 181 2.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PRINTS PR00478 Phosphoribulokinase family signature 126 144 2.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PRINTS PR00478 Phosphoribulokinase family signature 182 205 2.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PANTHER PTHR10285 1 279 3.2E-150 T 22-04-2016 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.2E-70 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 Gene3D G3DSA:3.40.50.300 1 287 3.8E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15660 5f3c9ca45c853e56a05c59e3689a3420 295 PANTHER PTHR10285:SF72 1 279 3.2E-150 T 22-04-2016 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 PANTHER PTHR21225:SF6 1 351 8.5E-247 T 22-04-2016 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 Pfam PF00793 DAHP synthetase I family 44 337 1.1E-100 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 1.1E-159 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 SUPERFAMILY SSF51569 9 348 1.47E-131 T 22-04-2016 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 Gene3D G3DSA:3.20.20.70 14 352 1.1E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 PIRSF PIRSF001361 1 352 3.4E-156 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS10810 ba476c1e2d8aa9a95bdfbfa49b4cd5ad 353 PANTHER PTHR21225 1 351 8.5E-247 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 PANTHER PTHR11819 2 479 2.0E-187 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 PANTHER PTHR11819:SF148 2 479 2.0E-187 T 22-04-2016 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 432 7.2E-91 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 492 1.8E-199 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 SAMA_RS02640 94ce416d8a7d32f7dffdb28a96937642 498 Pfam PF00474 Sodium:solute symporter family 34 432 3.4E-96 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS13370 78880ffc82e2160b770cd9b0fff2fa66 132 PANTHER PTHR39594 2 131 2.7E-38 T 22-04-2016 SAMA_RS13370 78880ffc82e2160b770cd9b0fff2fa66 132 Pfam PF04247 Invasion gene expression up-regulator, SirB 8 127 1.6E-42 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB SAMA_RS13370 78880ffc82e2160b770cd9b0fff2fa66 132 PIRSF PIRSF005610 4 125 4.1E-21 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 Pfam PF02625 XdhC and CoxI family 20 73 2.3E-16 T 22-04-2016 IPR003777 XdhC- CoxI SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 Pfam PF13478 XdhC Rossmann domain 189 326 1.7E-23 T 22-04-2016 IPR027051 XdhC Rossmann domain SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 PANTHER PTHR30388:SF4 154 325 5.2E-63 T 22-04-2016 SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 PANTHER PTHR30388:SF4 1 126 5.2E-63 T 22-04-2016 SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 PANTHER PTHR30388 154 325 5.2E-63 T 22-04-2016 SAMA_RS17875 9b882315f9aab6b9c65319ee3749e4ba 347 PANTHER PTHR30388 1 126 5.2E-63 T 22-04-2016 SAMA_RS04300 6b96a4eace108ed0429d5b54eef67ff4 112 SUPERFAMILY SSF54534 2 107 3.14E-41 T 22-04-2016 SAMA_RS04300 6b96a4eace108ed0429d5b54eef67ff4 112 Gene3D G3DSA:3.10.50.40 2 107 1.2E-44 T 22-04-2016 SAMA_RS04300 6b96a4eace108ed0429d5b54eef67ff4 112 PANTHER PTHR10516 2 112 4.8E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SAMA_RS04300 6b96a4eace108ed0429d5b54eef67ff4 112 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 3.2E-32 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 SUPERFAMILY SSF53955 10 325 8.44E-92 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 Gene3D G3DSA:1.10.530.10 207 325 2.9E-51 T 22-04-2016 SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 Gene3D G3DSA:1.10.530.10 70 125 2.9E-51 T 22-04-2016 SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 PANTHER PTHR30163 23 326 4.5E-126 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 33 322 7.3E-109 T 22-04-2016 IPR011757 Lytic transglycosylase MltB SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 PANTHER PTHR30163:SF0 23 326 4.5E-126 T 22-04-2016 SAMA_RS13530 43086535aa61248665f07b8d22036f2f 329 Pfam PF13406 Transglycosylase SLT domain 29 320 2.0E-92 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 SUPERFAMILY SSF46589 12 99 8.37E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.738 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 SUPERFAMILY SSF55681 92 327 5.35E-83 T 22-04-2016 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.7E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 5.9E-24 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 7.9E-114 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 PANTHER PTHR11538 92 327 4.8E-116 T 22-04-2016 SAMA_RS10210 b2eaacc23c56338f22d5cb7c4ee50424 327 Gene3D G3DSA:3.30.930.10 8 327 5.0E-134 T 22-04-2016 SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 PANTHER PTHR31964 1 152 1.0E-22 T 22-04-2016 SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 PRINTS PR01438 Universal stress protein signature 112 124 6.3E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 PRINTS PR01438 Universal stress protein signature 130 152 6.3E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 PRINTS PR01438 Universal stress protein signature 3 21 6.3E-10 T 22-04-2016 IPR006015 Universal stress protein A SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 Gene3D G3DSA:3.40.50.620 5 152 3.1E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 Pfam PF00582 Universal stress protein family 6 152 2.1E-24 T 22-04-2016 IPR006016 UspA GO:0006950 SAMA_RS02625 0dafc115d1e5bf238ce0ffdf8fdfd76d 152 SUPERFAMILY SSF52402 6 152 7.28E-29 T 22-04-2016 SAMA_RS13740 870c9584d0c7488dc0d5730c164e1377 144 SUPERFAMILY SSF158675 1 143 2.62E-55 T 22-04-2016 IPR023132 Sama2622-like domain SAMA_RS13740 870c9584d0c7488dc0d5730c164e1377 144 Gene3D G3DSA:1.10.3440.10 1 142 2.2E-62 T 22-04-2016 IPR023132 Sama2622-like domain SAMA_RS13740 870c9584d0c7488dc0d5730c164e1377 144 Pfam PF11269 Protein of unknown function (DUF3069) 23 142 2.1E-44 T 22-04-2016 IPR021422 Protein of unknown function DUF3069 SAMA_RS08840 aceb2d7f4d43c708ab6046a93fc3e73d 210 Pfam PF01914 MarC family integral membrane protein 4 205 3.5E-60 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SAMA_RS08840 aceb2d7f4d43c708ab6046a93fc3e73d 210 PANTHER PTHR33508:SF1 2 210 8.6E-86 T 22-04-2016 SAMA_RS08840 aceb2d7f4d43c708ab6046a93fc3e73d 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 200 2.4E-63 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SAMA_RS08840 aceb2d7f4d43c708ab6046a93fc3e73d 210 PANTHER PTHR33508 2 210 8.6E-86 T 22-04-2016 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 Gene3D G3DSA:3.40.640.10 61 329 1.5E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 47.455 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 421 3.1E-174 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 Gene3D G3DSA:3.90.1150.10 6 60 1.3E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 Gene3D G3DSA:3.90.1150.10 332 420 1.3E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 PANTHER PTHR11986 6 431 4.1E-195 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 Pfam PF00202 Aminotransferase class-III 26 419 1.0E-124 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 SUPERFAMILY SSF53383 5 420 3.41E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS07480 f45e80539985c3816bd514fb52914021 436 PANTHER PTHR11986:SF8 6 431 4.1E-195 T 22-04-2016 SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 PANTHER PTHR35891 1 202 1.2E-59 T 22-04-2016 SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 Pfam PF13462 Thioredoxin 45 181 6.6E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 PIRSF PIRSF001488 6 202 3.1E-36 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 PANTHER PTHR35891:SF2 1 202 1.2E-59 T 22-04-2016 SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 SUPERFAMILY SSF52833 26 200 2.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS07910 5381c44adff0968d6ae2d94216ba6d3e 202 Gene3D G3DSA:3.40.30.10 24 202 4.5E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 SUPERFAMILY SSF46785 1 87 2.03E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 Gene3D G3DSA:1.10.10.10 2 88 1.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 Gene3D G3DSA:3.40.190.10 177 265 5.3E-23 T 22-04-2016 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 SUPERFAMILY SSF53850 93 292 1.15E-37 T 22-04-2016 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 Gene3D G3DSA:3.40.190.10 93 176 2.9E-15 T 22-04-2016 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 PANTHER PTHR30419 1 293 1.9E-98 T 22-04-2016 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 PANTHER PTHR30419:SF8 1 293 1.9E-98 T 22-04-2016 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS15290 3f053e074cd49d2a0ba4039699f27477 296 Pfam PF03466 LysR substrate binding domain 91 293 7.5E-41 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Pfam PF01743 Poly A polymerase head domain 70 200 4.2E-34 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 40 467 1.1E-184 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 SUPERFAMILY SSF81301 42 196 3.92E-38 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 PANTHER PTHR13734 1 333 1.1E-130 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 17 466 37.472 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 PANTHER PTHR13734:SF47 1 333 1.1E-130 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Gene3D G3DSA:3.30.460.10 51 199 5.2E-48 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 SUPERFAMILY SSF81891 198 437 3.4E-48 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Gene3D G3DSA:1.10.3090.10 200 434 1.3E-47 T 22-04-2016 SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 463 9.1E-39 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain SAMA_RS04085 45ffcd15dd3a8cac7fdb52cdabaef2dd 482 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 287 2.0E-19 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SAMA_RS06605 7f095245b33f830ff2d16e140d541b8b 609 PANTHER PTHR33361 14 608 3.4E-300 T 22-04-2016 SAMA_RS06605 7f095245b33f830ff2d16e140d541b8b 609 PANTHER PTHR33361:SF4 14 608 3.4E-300 T 22-04-2016 SAMA_RS06605 7f095245b33f830ff2d16e140d541b8b 609 Pfam PF05960 Bacterial protein of unknown function (DUF885) 66 601 6.3E-168 T 22-04-2016 IPR010281 Protein of unknown function DUF885 SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 SMART SM00382 35 218 4.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 Pfam PF00005 ABC transporter 27 170 8.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 PANTHER PTHR24220:SF305 11 311 6.8E-174 T 22-04-2016 SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 PANTHER PTHR24220 11 311 6.8E-174 T 22-04-2016 SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 SUPERFAMILY SSF52540 6 237 1.15E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04055 106cb7dd0e5af34c200a2733bccb64e5 319 Gene3D G3DSA:3.40.50.300 6 233 1.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 SMART SM00244 18 203 1.6E-40 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 PANTHER PTHR10264:SF80 1 308 2.3E-107 T 22-04-2016 SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 PIRSF PIRSF005651 1 308 5.3E-98 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 SUPERFAMILY SSF117892 59 209 6.8E-27 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 Pfam PF01145 SPFH domain / Band 7 family 22 218 4.1E-32 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 TIGRFAM TIGR01932 hflC: HflC protein 1 303 1.7E-106 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SAMA_RS15760 fc0895f84dce8bfd295fc4777624cfaa 308 PANTHER PTHR10264 1 308 2.3E-107 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 SUPERFAMILY SSF51905 5 107 3.97E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 SUPERFAMILY SSF51905 165 305 3.97E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 PANTHER PTHR13847 3 451 7.1E-134 T 22-04-2016 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 Pfam PF01266 FAD dependent oxidoreductase 14 399 8.4E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 PANTHER PTHR13847:SF199 3 451 7.1E-134 T 22-04-2016 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 Gene3D G3DSA:3.50.50.60 6 104 8.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 Gene3D G3DSA:3.50.50.60 363 404 8.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS15200 6c3e4b9e0e85f0ce5a5a8d7a415394db 473 Gene3D G3DSA:3.50.50.60 161 251 8.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Gene3D G3DSA:3.90.190.20 312 446 1.3E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 446 34.286 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 PANTHER PTHR23135 11 445 2.5E-156 T 22-04-2016 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Pfam PF08245 Mur ligase middle domain 106 292 8.3E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 445 1.6E-133 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 PANTHER PTHR23135:SF3 11 445 2.5E-156 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 394 3.8E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Gene3D G3DSA:3.40.1390.10 2 80 1.1E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 SUPERFAMILY SSF63418 3 96 3.79E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Gene3D G3DSA:3.40.1190.10 82 310 1.0E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 SUPERFAMILY SSF53244 313 445 5.72E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 Pfam PF01225 Mur ligase family, catalytic domain 24 89 6.2E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS01870 5666628908ec1011ef2bab6d0f2416f7 455 SUPERFAMILY SSF53623 100 310 7.85E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SAMA_RS04180 41f20802734363cc98dfc2693079b1d4 352 PANTHER PTHR33529 1 352 2.3E-143 T 22-04-2016 SAMA_RS04180 41f20802734363cc98dfc2693079b1d4 352 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 8.8E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SAMA_RS04180 41f20802734363cc98dfc2693079b1d4 352 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 352 2.3E-134 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 SAMA_RS04180 41f20802734363cc98dfc2693079b1d4 352 PANTHER PTHR33529:SF1 1 352 2.3E-143 T 22-04-2016 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 186 4.9E-53 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 PANTHER PTHR11746:SF102 123 189 5.3E-31 T 22-04-2016 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 PANTHER PTHR11746 123 189 5.3E-31 T 22-04-2016 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 SUPERFAMILY SSF52972 2 187 7.85E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 Hamap MF_00528 Septum formation protein Maf [maf]. 3 192 28.864 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 PIRSF PIRSF006305 1 192 1.3E-37 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 Gene3D G3DSA:3.90.950.10 2 189 8.5E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SAMA_RS10370 221f1b7ec7cf733b22e23c47b49822b1 199 Pfam PF02545 Maf-like protein 4 187 3.0E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 PIRSF PIRSF006755 1 222 1.6E-64 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 3 176 2.5E-42 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 Gene3D G3DSA:3.40.50.300 2 214 2.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 SUPERFAMILY SSF52540 2 212 2.79E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 Pfam PF13500 AAA domain 2 209 3.8E-34 T 22-04-2016 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 PANTHER PTHR21343:SF13 1 225 1.0E-95 T 22-04-2016 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 PANTHER PTHR21343 1 225 1.0E-95 T 22-04-2016 SAMA_RS07500 c621588a948c4409a687101a431d26c1 229 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 211 25.598 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 Pfam PF00588 SpoU rRNA Methylase family 20 159 3.3E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 Gene3D G3DSA:3.40.1280.10 5 185 4.6E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 SUPERFAMILY SSF75217 4 185 1.31E-47 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 PANTHER PTHR12029 1 187 4.2E-61 T 22-04-2016 SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 215 4.5E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 SAMA_RS01415 fab49528a9a8b8b15cb2a7bf8dff12c9 241 PANTHER PTHR12029:SF45 1 187 4.2E-61 T 22-04-2016 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 SMART SM00729 35 258 1.3E-42 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 Pfam PF16199 Radical_SAM C-terminal domain 219 291 5.3E-20 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 Gene3D G3DSA:3.80.30.20 37 262 9.7E-35 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 18 309 8.3E-109 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 PANTHER PTHR11135 11 297 8.7E-125 T 22-04-2016 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 Pfam PF04055 Radical SAM superfamily 56 211 7.2E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 SUPERFAMILY SSF102114 29 280 5.1E-50 T 22-04-2016 SAMA_RS04490 bfa3c98c021780be4a1396d5a6e4627d 321 PANTHER PTHR11135:SF1 11 297 8.7E-125 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 PANTHER PTHR24096 24 463 5.9E-128 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 38 469 3.7E-101 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Gene3D G3DSA:3.30.300.30 380 470 2.7E-14 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Gene3D G3DSA:2.30.38.10 325 375 8.8E-10 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Pfam PF00501 AMP-binding enzyme 17 382 8.3E-52 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Gene3D G3DSA:3.40.50.980 16 159 2.5E-16 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 SUPERFAMILY SSF56801 14 471 2.62E-91 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Gene3D G3DSA:3.40.50.980 160 314 7.4E-26 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 PANTHER PTHR24096:SF109 24 463 5.9E-128 T 22-04-2016 SAMA_RS18010 15de37bf4fdc105fd103c8d44291e11a 477 Pfam PF13193 AMP-binding enzyme C-terminal domain 391 457 7.6E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SAMA_RS01500 7730239c4ae3c6461f51b9e52b383f2d 483 SUPERFAMILY SSF55874 12 214 6.16E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS01500 7730239c4ae3c6461f51b9e52b383f2d 483 Gene3D G3DSA:3.30.565.10 9 211 3.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS01500 7730239c4ae3c6461f51b9e52b383f2d 483 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 10 120 9.0E-30 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 PANTHER PTHR14226:SF24 209 309 2.1E-113 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 PANTHER PTHR14226:SF24 1 190 2.1E-113 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 Pfam PF01734 Patatin-like phospholipase 9 165 3.8E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 Gene3D G3DSA:3.40.1090.10 38 167 2.5E-6 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 PANTHER PTHR14226 209 309 2.1E-113 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 PANTHER PTHR14226 1 190 2.1E-113 T 22-04-2016 SAMA_RS06675 54cf638b8cec55023a34f2aedf6857c2 311 SUPERFAMILY SSF52151 1 298 6.63E-56 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 537 1.4E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 Pfam PF00672 HAMP domain 189 255 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 SUPERFAMILY SSF58104 230 539 1.57E-70 T 22-04-2016 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 SMART SM00283 277 538 1.4E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 SMART SM00304 208 262 8.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 PANTHER PTHR32089 182 539 1.1E-97 T 22-04-2016 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 Gene3D G3DSA:1.10.287.950 292 508 1.6E-50 T 22-04-2016 SAMA_RS03305 faee74d6189994d382020ba6013ad050 539 PANTHER PTHR32089:SF34 182 539 1.1E-97 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712:SF279 200 431 3.0E-19 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712:SF279 21 52 3.0E-19 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712:SF279 469 683 3.0E-19 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 TIGRFAM TIGR02816 pfaB_fam: PfaB family protein 266 669 6.5E-75 T 22-04-2016 IPR014181 Omega-3 polyunsaturated fatty acid synthase-like SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 Gene3D G3DSA:3.40.366.10 528 657 2.4E-16 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 Gene3D G3DSA:3.40.366.10 301 425 2.4E-16 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 SUPERFAMILY SSF52151 529 633 4.45E-22 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 SUPERFAMILY SSF52151 305 430 4.45E-22 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 308 662 3.6E-6 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712 200 431 3.0E-19 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712 21 52 3.0E-19 T 22-04-2016 SAMA_RS05840 693ba4282dd0715e7d2bb7ba1595ea82 686 PANTHER PTHR11712 469 683 3.0E-19 T 22-04-2016 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 SMART SM00304 211 264 0.0044 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 539 1.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 4.7E-9 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 4.7E-9 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 SUPERFAMILY SSF58104 232 539 2.75E-80 T 22-04-2016 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 PANTHER PTHR32089 169 541 2.5E-139 T 22-04-2016 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 178 5.9E-15 T 22-04-2016 IPR024478 4HB MCP domain SAMA_RS13665 0c1291055a20077968661da0d9226500 541 PANTHER PTHR32089:SF44 169 541 2.5E-139 T 22-04-2016 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 Pfam PF00672 HAMP domain 192 260 3.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 SMART SM00283 279 540 7.6E-83 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13665 0c1291055a20077968661da0d9226500 541 Gene3D G3DSA:1.10.287.950 294 510 5.4E-61 T 22-04-2016 SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 Gene3D G3DSA:1.20.1550.10 2 167 4.1E-60 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 167 21.579 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 PANTHER PTHR36570:SF2 1 168 4.8E-74 T 22-04-2016 SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 PANTHER PTHR36570 1 168 4.8E-74 T 22-04-2016 SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 SUPERFAMILY SSF158442 14 159 3.4E-44 T 22-04-2016 SAMA_RS10075 5f300105b5a1fb6f59fe9e1f9899d74c 169 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 2.0E-43 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 5.2E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 PANTHER PTHR22748:SF7 1 268 2.1E-123 T 22-04-2016 SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.7E-79 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 Gene3D G3DSA:3.60.10.10 1 267 1.2E-77 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 PANTHER PTHR22748 1 268 2.1E-123 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.1E-92 T 22-04-2016 SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 SUPERFAMILY SSF56219 1 268 3.01E-82 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS11175 c5038685f58dfae832f941a9b7860113 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SAMA_RS17295 fbf41bad60a325e589af1fab7ffcd543 70 Pfam PF06526 Protein of unknown function (DUF1107) 2 62 3.5E-23 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 SAMA_RS17295 fbf41bad60a325e589af1fab7ffcd543 70 Gene3D G3DSA:3.30.1910.10 2 64 3.1E-22 T 22-04-2016 SAMA_RS17295 fbf41bad60a325e589af1fab7ffcd543 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 60 2.0E-6 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 SAMA_RS18135 12f5cfc564f881036537ff22cb8f2e55 71 Pfam PF11137 Protein of unknown function (DUF2909) 6 64 7.9E-21 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 SAMA_RS11640 16b5956cc9bab644f28675d63fe63515 328 PANTHER PTHR11820:SF85 6 327 2.7E-162 T 22-04-2016 SAMA_RS11640 16b5956cc9bab644f28675d63fe63515 328 SUPERFAMILY SSF56529 77 325 6.41E-64 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS11640 16b5956cc9bab644f28675d63fe63515 328 Gene3D G3DSA:3.90.850.10 66 307 9.7E-45 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS11640 16b5956cc9bab644f28675d63fe63515 328 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 7.2E-43 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS11640 16b5956cc9bab644f28675d63fe63515 328 PANTHER PTHR11820 6 327 2.7E-162 T 22-04-2016 SAMA_RS06620 3c768a7dba83ba9570ebfbe712bd2f55 76 Pfam PF13275 S4 domain 14 73 5.7E-25 T 22-04-2016 SAMA_RS06620 3c768a7dba83ba9570ebfbe712bd2f55 76 SUPERFAMILY SSF55174 9 73 1.11E-19 T 22-04-2016 SAMA_RS06620 3c768a7dba83ba9570ebfbe712bd2f55 76 Gene3D G3DSA:3.10.290.10 10 74 9.7E-27 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SAMA_RS06620 3c768a7dba83ba9570ebfbe712bd2f55 76 PANTHER PTHR32319 11 76 4.2E-23 T 22-04-2016 SAMA_RS13260 94b2db191dd61fa20a4112144b989e37 363 PANTHER PTHR33376 2 349 3.0E-144 T 22-04-2016 SAMA_RS13260 94b2db191dd61fa20a4112144b989e37 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 326 3.6E-63 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SAMA_RS13260 94b2db191dd61fa20a4112144b989e37 363 SUPERFAMILY SSF53850 167 312 4.25E-5 T 22-04-2016 SAMA_RS13260 94b2db191dd61fa20a4112144b989e37 363 PANTHER PTHR33376:SF5 2 349 3.0E-144 T 22-04-2016 SAMA_RS13260 94b2db191dd61fa20a4112144b989e37 363 PIRSF PIRSF039026 6 363 3.0E-136 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like SAMA_RS06100 ce89459fb104418968d0cc48c1f7ab75 127 Pfam PF16358 RcsF lipoprotein 53 121 7.8E-13 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 Gene3D G3DSA:3.20.10.10 151 280 2.3E-30 T 22-04-2016 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 PANTHER PTHR11825 17 276 1.6E-60 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 SUPERFAMILY SSF56752 33 281 1.83E-56 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 Gene3D G3DSA:3.30.470.10 32 134 9.5E-21 T 22-04-2016 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 Pfam PF01063 Amino-transferase class IV 47 274 1.1E-35 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 PANTHER PTHR11825:SF55 17 276 1.6E-60 T 22-04-2016 SAMA_RS10665 1054698fa0227c1c38d6468a84ec023f 296 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 31 285 4.3E-77 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 Gene3D G3DSA:3.30.1150.10 123 202 5.3E-11 T 22-04-2016 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 SUPERFAMILY SSF74653 114 192 3.01E-24 T 22-04-2016 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PANTHER PTHR33446:SF1 38 202 3.7E-32 T 22-04-2016 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PANTHER PTHR33446 38 202 3.7E-32 T 22-04-2016 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 1.4E-14 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 1.4E-14 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 1.4E-14 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 1.4E-14 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 201 1.1E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS06590 f69e82a4279278a2d696ee0dfba4a29c 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 123 201 7.7E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 Pfam PF07690 Major Facilitator Superfamily 8 345 1.6E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 SUPERFAMILY SSF103473 3 381 5.75E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PANTHER PTHR23501 1 387 1.2E-160 T 22-04-2016 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.3E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PRINTS PR01035 Tetracycline resistance protein signature 10 26 7.3E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PRINTS PR01035 Tetracycline resistance protein signature 158 178 7.3E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PRINTS PR01035 Tetracycline resistance protein signature 40 59 7.3E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 Gene3D G3DSA:1.20.1250.20 5 182 3.5E-27 T 22-04-2016 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 PANTHER PTHR23501:SF4 1 387 1.2E-160 T 22-04-2016 SAMA_RS12495 0ab33e81305d65d908fae01e66920dd3 397 Gene3D G3DSA:1.20.1250.20 199 382 2.8E-18 T 22-04-2016 SAMA_RS03895 a0bd52869022b7b4abe3a4114f69ff72 166 PANTHER PTHR36152:SF1 19 142 7.8E-22 T 22-04-2016 SAMA_RS03895 a0bd52869022b7b4abe3a4114f69ff72 166 Pfam PF05638 Type VI secretion system effector, Hcp 19 141 8.1E-25 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp SAMA_RS03895 a0bd52869022b7b4abe3a4114f69ff72 166 PANTHER PTHR36152 19 142 7.8E-22 T 22-04-2016 SAMA_RS03895 a0bd52869022b7b4abe3a4114f69ff72 166 SUPERFAMILY SSF141452 18 152 3.79E-31 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp SAMA_RS03895 a0bd52869022b7b4abe3a4114f69ff72 166 Gene3D G3DSA:2.30.110.20 19 152 3.2E-31 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp SAMA_RS07140 394c906c3e55cca3ef1a21681fc2feda 135 PANTHER PTHR38013 4 134 2.3E-30 T 22-04-2016 SAMA_RS07140 394c906c3e55cca3ef1a21681fc2feda 135 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 35 128 6.5E-16 T 22-04-2016 SAMA_RS15230 f695e46791875ea406331f1db1d4d68b 297 SUPERFAMILY SSF103481 36 134 2.22E-11 T 22-04-2016 SAMA_RS15230 f695e46791875ea406331f1db1d4d68b 297 SUPERFAMILY SSF103481 181 273 1.44E-14 T 22-04-2016 SAMA_RS15230 f695e46791875ea406331f1db1d4d68b 297 Pfam PF00892 EamA-like transporter family 147 271 5.5E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS15230 f695e46791875ea406331f1db1d4d68b 297 Pfam PF00892 EamA-like transporter family 6 133 6.2E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS15230 f695e46791875ea406331f1db1d4d68b 297 PANTHER PTHR22911 6 288 9.3E-38 T 22-04-2016 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 Pfam PF00672 HAMP domain 301 367 1.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 Gene3D G3DSA:1.10.287.950 406 593 2.5E-41 T 22-04-2016 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 SMART SM00283 387 645 3.3E-27 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 SMART SM00304 320 372 0.001 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 PANTHER PTHR32089 238 646 1.3E-62 T 22-04-2016 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 PANTHER PTHR32089:SF34 238 646 1.3E-62 T 22-04-2016 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 SUPERFAMILY SSF58104 343 639 1.7E-50 T 22-04-2016 SAMA_RS18260 1b22e6326225b9bfb740733a2ad83909 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 639 2.3E-30 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 SMART SM00962 246 439 2.4E-59 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 Gene3D G3DSA:1.20.120.140 194 258 1.1E-9 T 22-04-2016 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 334 6.8E-85 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 PANTHER PTHR11564 155 439 2.0E-116 T 22-04-2016 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 Pfam PF00448 SRP54-type protein, GTPase domain 248 438 1.0E-38 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 PANTHER PTHR11564:SF3 155 439 2.0E-116 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 Gene3D G3DSA:3.40.50.300 259 438 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 SMART SM00382 245 383 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS11950 f09fef4ed38af275ded3dcb236b1b199 463 SUPERFAMILY SSF52540 242 429 1.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18835 e9c74562d8698507038ff2a7af4df05d 198 PANTHER PTHR33508 1 198 1.3E-94 T 22-04-2016 SAMA_RS18835 e9c74562d8698507038ff2a7af4df05d 198 PANTHER PTHR33508:SF4 1 198 1.3E-94 T 22-04-2016 SAMA_RS18835 e9c74562d8698507038ff2a7af4df05d 198 Pfam PF01914 MarC family integral membrane protein 3 192 2.0E-53 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SAMA_RS18755 2b333343087347fda0ee6fd2d67c88a7 64 PIRSF PIRSF036704 1 63 2.1E-18 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing SAMA_RS18755 2b333343087347fda0ee6fd2d67c88a7 64 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 4 61 4.8E-17 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing SAMA_RS03830 031f6bab0bcca76c0543d8927a370e19 758 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 281 725 4.1E-68 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS03830 031f6bab0bcca76c0543d8927a370e19 758 SUPERFAMILY SSF81442 276 744 1.96E-77 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 Gene3D G3DSA:2.170.130.10 57 197 6.9E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 187 1.2E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 89 733 3.0E-96 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 PANTHER PTHR32552 61 733 1.3E-134 T 22-04-2016 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 PANTHER PTHR32552 10 38 1.3E-134 T 22-04-2016 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 Pfam PF00593 TonB dependent receptor 494 732 6.2E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 Gene3D G3DSA:2.40.170.20 201 733 8.3E-136 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 PANTHER PTHR32552:SF17 61 733 1.3E-134 T 22-04-2016 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 PANTHER PTHR32552:SF17 10 38 1.3E-134 T 22-04-2016 SAMA_RS15010 051c040369660a347836fd8bc083e35c 733 SUPERFAMILY SSF56935 61 733 4.19E-125 T 22-04-2016 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 PANTHER PTHR13929:SF0 1 289 3.7E-82 T 22-04-2016 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 Pfam PF01040 UbiA prenyltransferase family 18 255 6.9E-39 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 PANTHER PTHR13929 1 289 3.7E-82 T 22-04-2016 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 9 286 2.5E-58 T 22-04-2016 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 PIRSF PIRSF005355 1 292 2.3E-83 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 SAMA_RS07125 08216e7d36bd3e21d6bffbc9b5722f34 293 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 1 287 20.147 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS12230 6962c4415110167794a3fe12fec03d8c 826 Pfam PF01973 Protein of unknown function DUF115 173 337 3.0E-43 T 22-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SAMA_RS12230 6962c4415110167794a3fe12fec03d8c 826 SUPERFAMILY SSF48452 717 825 8.93E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12230 6962c4415110167794a3fe12fec03d8c 826 Gene3D G3DSA:1.25.40.10 717 826 1.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12230 6962c4415110167794a3fe12fec03d8c 826 Gene3D G3DSA:3.90.1480.10 195 437 2.0E-22 T 22-04-2016 SAMA_RS09750 27293e27e07656fab665653169c71111 241 Pfam PF03006 Haemolysin-III related 36 230 5.0E-35 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SAMA_RS09750 27293e27e07656fab665653169c71111 241 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 37 236 2.1E-63 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SAMA_RS09750 27293e27e07656fab665653169c71111 241 PANTHER PTHR20855 35 239 2.1E-67 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SAMA_RS09750 27293e27e07656fab665653169c71111 241 PANTHER PTHR20855:SF3 35 239 2.1E-67 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 PANTHER PTHR11063 4 420 1.8E-171 T 22-04-2016 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 Gene3D G3DSA:3.40.605.10 379 419 4.1E-93 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 Gene3D G3DSA:3.40.605.10 4 225 4.1E-93 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 Pfam PF00171 Aldehyde dehydrogenase family 13 272 9.4E-13 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 420 39.675 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 Gene3D G3DSA:3.40.309.10 228 378 6.9E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 PIRSF PIRSF000151 1 420 1.1E-166 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 PANTHER PTHR11063:SF8 4 420 1.8E-171 T 22-04-2016 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 410 3.8E-160 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SAMA_RS13125 03f8ab6e5bd7181926766c7b4a563075 420 SUPERFAMILY SSF53720 9 418 3.53E-110 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 55 312 9.5E-97 T 22-04-2016 IPR020015 Decaheme cytochrome, c-type, DmsE SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 PANTHER PTHR35038:SF3 24 313 4.2E-81 T 22-04-2016 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 SUPERFAMILY SSF48695 55 313 5.12E-53 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 Gene3D G3DSA:1.10.3820.10 164 303 9.3E-19 T 22-04-2016 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 240 276 1.5E-10 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 86 136 8.6E-6 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 192 233 3.0E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 Gene3D G3DSA:1.10.710.10 50 163 1.7E-12 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 240 277 2.8E-10 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 193 232 1.3E-7 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 SAMA_RS06350 6aa68a3289103b64d1513e82e79a6f54 318 PANTHER PTHR35038 24 313 4.2E-81 T 22-04-2016 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 PANTHER PTHR11606:SF3 25 344 1.9E-139 T 22-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 Gene3D G3DSA:3.40.192.10 3 148 3.6E-67 T 22-04-2016 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 SUPERFAMILY SSF51735 138 339 7.53E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 130 1.9E-26 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 206 321 5.3E-11 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 SUPERFAMILY SSF53223 4 143 1.06E-46 T 22-04-2016 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 PANTHER PTHR11606 25 344 1.9E-139 T 22-04-2016 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 PIRSF PIRSF000188 1 344 1.1E-156 T 22-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 Gene3D G3DSA:3.40.50.720 149 331 3.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS10775 111c346676b5ecc78cd8057937785b10 344 SMART SM00839 141 344 9.7E-70 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SAMA_RS05920 692c34d132bc19f6dbf6b0e37e2d8199 337 Pfam PF12069 Protein of unknown function (DUF3549) 3 332 2.7E-132 T 22-04-2016 IPR021936 Protein of unknown function DUF3549 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 6.6E-37 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 PANTHER PTHR22769:SF35 1 127 1.3E-35 T 22-04-2016 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 PANTHER PTHR22769 1 127 1.3E-35 T 22-04-2016 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 Pfam PF00293 NUDIX domain 6 124 1.0E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 SUPERFAMILY SSF55811 3 126 1.76E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS01980 ab288c53c4b09c88d53e5176aadb346a 131 Gene3D G3DSA:3.90.79.10 6 129 6.6E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS00565 1f37dc0de5d5d7708c2585e60238f3b6 243 PANTHER PTHR10859:SF49 1 227 9.6E-76 T 22-04-2016 SAMA_RS00565 1f37dc0de5d5d7708c2585e60238f3b6 243 SUPERFAMILY SSF53448 1 228 1.26E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS00565 1f37dc0de5d5d7708c2585e60238f3b6 243 Pfam PF00535 Glycosyl transferase family 2 3 165 3.2E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SAMA_RS00565 1f37dc0de5d5d7708c2585e60238f3b6 243 PANTHER PTHR10859 1 227 9.6E-76 T 22-04-2016 SAMA_RS00565 1f37dc0de5d5d7708c2585e60238f3b6 243 Gene3D G3DSA:3.90.550.10 2 172 4.1E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS18865 0f0d1482050e32526d7550f569ef5082 420 PANTHER PTHR30414 1 420 3.0E-196 T 22-04-2016 SAMA_RS18865 0f0d1482050e32526d7550f569ef5082 420 PANTHER PTHR30414:SF0 1 420 3.0E-196 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 SAMA_RS18865 0f0d1482050e32526d7550f569ef5082 420 Pfam PF00924 Mechanosensitive ion channel 149 401 1.4E-46 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SAMA_RS18865 0f0d1482050e32526d7550f569ef5082 420 SUPERFAMILY SSF50182 191 258 3.27E-12 T 22-04-2016 IPR010920 LSM domain SAMA_RS18865 0f0d1482050e32526d7550f569ef5082 420 Gene3D G3DSA:2.30.30.60 210 258 6.8E-9 T 22-04-2016 SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 Gene3D G3DSA:1.10.455.10 8 156 1.9E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 PANTHER PTHR11205 1 156 5.9E-94 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.959 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.0E-69 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 SUPERFAMILY SSF47973 6 149 9.16E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.4E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 PIRSF PIRSF002122 3 156 4.6E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SAMA_RS01105 94ff2d841c63a28d4ed16989af66844f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SAMA_RS09785 6b140b9cd955d686c6ebb6a4b999b832 269 SUPERFAMILY SSF56235 2 255 1.93E-46 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS09785 6b140b9cd955d686c6ebb6a4b999b832 269 PANTHER PTHR11907 1 256 4.0E-120 T 22-04-2016 SAMA_RS09785 6b140b9cd955d686c6ebb6a4b999b832 269 Pfam PF13230 Glutamine amidotransferases class-II 1 257 2.9E-108 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 SAMA_RS09785 6b140b9cd955d686c6ebb6a4b999b832 269 PANTHER PTHR11907:SF10 1 256 4.0E-120 T 22-04-2016 SAMA_RS09785 6b140b9cd955d686c6ebb6a4b999b832 269 Gene3D G3DSA:3.60.20.10 1 255 6.4E-61 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PANTHER PTHR30035 34 252 5.7E-102 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 Pfam PF04333 MlaA lipoprotein 38 229 6.1E-67 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PRINTS PR01805 VacJ lipoprotein signature 39 52 1.5E-25 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PRINTS PR01805 VacJ lipoprotein signature 57 73 1.5E-25 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PRINTS PR01805 VacJ lipoprotein signature 144 161 1.5E-25 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PRINTS PR01805 VacJ lipoprotein signature 108 125 1.5E-25 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SAMA_RS11880 558932f8ad0064bfc6beef58d0dfac2d 254 PANTHER PTHR30035:SF3 34 252 5.7E-102 T 22-04-2016 SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 SUPERFAMILY SSF103473 21 381 5.62E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 Pfam PF07690 Major Facilitator Superfamily 23 216 1.7E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 Gene3D G3DSA:1.20.1250.20 21 185 1.4E-14 T 22-04-2016 SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 Gene3D G3DSA:1.20.1250.20 208 379 2.5E-12 T 22-04-2016 SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 PANTHER PTHR23514:SF13 18 381 2.9E-102 T 22-04-2016 SAMA_RS15250 28c57b743d46ba881caf016e0638b771 382 PANTHER PTHR23514 18 381 2.9E-102 T 22-04-2016 SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 Gene3D G3DSA:3.10.129.10 10 144 3.2E-47 T 22-04-2016 IPR029069 HotDog domain SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 SUPERFAMILY SSF54637 8 144 9.64E-34 T 22-04-2016 IPR029069 HotDog domain SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 Pfam PF03061 Thioesterase superfamily 57 134 2.4E-16 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 PANTHER PTHR12418 1 145 1.3E-72 T 22-04-2016 SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 PANTHER PTHR12418:SF33 1 145 1.3E-72 T 22-04-2016 SAMA_RS15370 cb8cd7920303fb634f065958928303ef 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 141 2.4E-34 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain SAMA_RS16635 bf00f4a5cb1ebf9003466dc0e2963acd 137 Pfam PF00472 RF-1 domain 6 132 9.1E-26 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SAMA_RS16635 bf00f4a5cb1ebf9003466dc0e2963acd 137 SUPERFAMILY SSF75620 7 123 2.28E-14 T 22-04-2016 SAMA_RS16635 bf00f4a5cb1ebf9003466dc0e2963acd 137 PANTHER PTHR11075 8 135 3.0E-40 T 22-04-2016 SAMA_RS16635 bf00f4a5cb1ebf9003466dc0e2963acd 137 Gene3D G3DSA:3.30.160.200 2 105 9.9E-34 T 22-04-2016 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 Gene3D G3DSA:2.30.30.40 100 146 3.3E-6 T 22-04-2016 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 PANTHER PTHR22617 14 168 3.4E-46 T 22-04-2016 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 SUPERFAMILY SSF50341 11 155 3.53E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 SMART SM00260 11 152 1.3E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 Pfam PF01584 CheW-like domain 15 154 1.6E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS18180 c62f1c829c59ad7fb21778126c32c7e2 179 Gene3D G3DSA:2.40.50.180 53 99 3.1E-10 T 22-04-2016 SAMA_RS12205 40ee7aad27a2e9a0d424cee7d2becbf1 388 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 370 2.4E-90 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SAMA_RS12205 40ee7aad27a2e9a0d424cee7d2becbf1 388 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 369 3.4E-140 T 22-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SAMA_RS12205 40ee7aad27a2e9a0d424cee7d2becbf1 388 Gene3D G3DSA:3.40.50.2000 210 371 8.3E-10 T 22-04-2016 SAMA_RS12205 40ee7aad27a2e9a0d424cee7d2becbf1 388 Gene3D G3DSA:3.40.50.2000 1 209 8.9E-46 T 22-04-2016 SAMA_RS12205 40ee7aad27a2e9a0d424cee7d2becbf1 388 SUPERFAMILY SSF53756 1 382 2.3E-91 T 22-04-2016 SAMA_RS17510 79c7a7981a7c5eee844d6814cd70c733 60 Pfam PF11174 Protein of unknown function (DUF2970) 4 59 1.3E-23 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 241 9.2E-53 T 22-04-2016 SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PANTHER PTHR24322 8 134 7.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PANTHER PTHR24322 150 182 7.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 Gene3D G3DSA:3.40.50.720 3 242 1.4E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PANTHER PTHR24322:SF328 8 134 7.7E-40 T 22-04-2016 SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PANTHER PTHR24322:SF328 150 182 7.7E-40 T 22-04-2016 SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 SUPERFAMILY SSF51735 4 242 3.84E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS11790 f929eb95448bca52cef610672266c9c4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 PANTHER PTHR10799:SF750 210 337 8.6E-30 T 22-04-2016 SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 PANTHER PTHR10799:SF750 12 78 8.6E-30 T 22-04-2016 SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 336 1.8E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 SUPERFAMILY SSF55073 185 340 2.2E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 340 2.6E-51 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 PANTHER PTHR10799 210 337 8.6E-30 T 22-04-2016 SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 PANTHER PTHR10799 12 78 8.6E-30 T 22-04-2016 SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 SMART SM00267 169 340 3.0E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09170 a620fa83f3c0f7dbcd5d028edd350b40 341 Gene3D G3DSA:3.30.70.270 182 340 2.6E-52 T 22-04-2016 SAMA_RS08450 f679fcd337bffb8181a87808b8719f09 344 PANTHER PTHR10188 24 343 2.8E-136 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SAMA_RS08450 f679fcd337bffb8181a87808b8719f09 344 SUPERFAMILY SSF56235 29 179 2.32E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS08450 f679fcd337bffb8181a87808b8719f09 344 SUPERFAMILY SSF56235 206 341 2.32E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS08450 f679fcd337bffb8181a87808b8719f09 344 Pfam PF01112 Asparaginase 30 341 3.2E-120 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SAMA_RS08450 f679fcd337bffb8181a87808b8719f09 344 PANTHER PTHR10188:SF24 24 343 2.8E-136 T 22-04-2016 SAMA_RS00825 6ae52b07432905fb98cd43c45e71393f 134 PANTHER PTHR30558 1 129 1.7E-25 T 22-04-2016 SAMA_RS00825 6ae52b07432905fb98cd43c45e71393f 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 1.4E-29 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 SUPERFAMILY SSF50891 40 197 9.94E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 91 4.2E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 4.2E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 68 4.2E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 PANTHER PTHR11071 40 199 6.9E-51 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 Gene3D G3DSA:2.40.100.10 41 198 2.5E-45 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 PANTHER PTHR11071:SF265 40 199 6.9E-51 T 22-04-2016 SAMA_RS12665 50db4845644b9f5df5cd231708268462 203 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 42 196 7.2E-43 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SAMA_RS05265 43394a7ff1ab0295beaa2271f95887b6 1148 SUPERFAMILY SSF53300 221 307 2.35E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS05265 43394a7ff1ab0295beaa2271f95887b6 1148 SUPERFAMILY SSF53300 340 358 2.35E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS05265 43394a7ff1ab0295beaa2271f95887b6 1148 SUPERFAMILY SSF53300 389 453 2.35E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS05265 43394a7ff1ab0295beaa2271f95887b6 1148 Pfam PF05567 Neisseria PilC beta-propeller domain 649 875 1.5E-24 T 22-04-2016 IPR008707 PilC beta-propeller domain SAMA_RS01715 951836aa2eed88ff72ba496dda4697d2 287 PANTHER PTHR30636 1 287 9.8E-109 T 22-04-2016 SAMA_RS01715 951836aa2eed88ff72ba496dda4697d2 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 6.3E-45 T 22-04-2016 IPR013527 YicC-like, N-terminal SAMA_RS01715 951836aa2eed88ff72ba496dda4697d2 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 8.7E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 SAMA_RS01715 951836aa2eed88ff72ba496dda4697d2 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.1E-111 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 Pfam PF01401 Angiotensin-converting enzyme 57 630 9.0E-216 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 496 523 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 250 277 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 285 306 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 461 486 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 524 552 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 422 442 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 362 387 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 394 410 7.3E-83 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 PANTHER PTHR10514 58 630 4.4E-288 T 22-04-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 SAMA_RS09480 3d0f338af80c0639193586b6b539da8b 630 SUPERFAMILY SSF55486 58 630 4.47E-212 T 22-04-2016 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 SMART SM00028 243 276 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 SMART SM00028 72 105 0.079 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 SMART SM00028 106 139 1.9E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 SMART SM00028 140 173 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 PIRSF PIRSF004654 1 301 1.6E-127 T 22-04-2016 IPR023605 Lipoprotein NlpI SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 PANTHER PTHR23083 243 295 2.7E-17 T 22-04-2016 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 PANTHER PTHR23083 53 173 2.7E-17 T 22-04-2016 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 Gene3D G3DSA:1.25.40.10 56 276 3.2E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 SUPERFAMILY SSF48452 39 290 5.42E-68 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS05060 e608ce52be2a107e7be0c3898ecba644 301 Pfam PF00515 Tetratricopeptide repeat 106 139 4.6E-7 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SAMA_RS00265 be0836ddef57f09f96646042fa93bcc2 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 6.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS00265 be0836ddef57f09f96646042fa93bcc2 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 42 0.002 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS00265 be0836ddef57f09f96646042fa93bcc2 182 Gene3D G3DSA:2.160.10.10 6 177 6.3E-45 T 22-04-2016 SAMA_RS00265 be0836ddef57f09f96646042fa93bcc2 182 SUPERFAMILY SSF51161 6 177 2.08E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS00265 be0836ddef57f09f96646042fa93bcc2 182 PANTHER PTHR13061 8 178 2.1E-71 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Gene3D G3DSA:1.10.1060.10 298 299 1.5E-8 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Gene3D G3DSA:1.10.1060.10 227 258 1.5E-8 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Gene3D G3DSA:1.10.1060.10 463 502 1.2E-6 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 455 466 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 424 435 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 PANTHER PTHR24960:SF43 93 257 1.5E-133 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 PANTHER PTHR24960:SF43 416 547 1.5E-133 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 SUPERFAMILY SSF54862 415 535 4.31E-43 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 SUPERFAMILY SSF54862 169 243 4.31E-43 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Gene3D G3DSA:3.30.70.20 410 462 2.7E-14 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Pfam PF12838 4Fe-4S dicluster domain 195 236 1.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Gene3D G3DSA:3.30.70.20 173 226 3.5E-14 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 Pfam PF13187 4Fe-4S dicluster domain 423 470 2.3E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 PANTHER PTHR24960 93 257 1.5E-133 T 22-04-2016 SAMA_RS18785 a0b742b7b4ab92d803d0cae0c52efdf8 554 PANTHER PTHR24960 416 547 1.5E-133 T 22-04-2016 SAMA_RS07600 abc892c19b1e1907c5ab75d0dae3c62f 166 Pfam PF13302 Acetyltransferase (GNAT) domain 5 144 8.3E-25 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS07600 abc892c19b1e1907c5ab75d0dae3c62f 166 PANTHER PTHR13256:SF19 1 147 2.1E-36 T 22-04-2016 SAMA_RS07600 abc892c19b1e1907c5ab75d0dae3c62f 166 Gene3D G3DSA:3.40.630.30 2 165 1.2E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07600 abc892c19b1e1907c5ab75d0dae3c62f 166 SUPERFAMILY SSF55729 1 149 3.67E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS07600 abc892c19b1e1907c5ab75d0dae3c62f 166 PANTHER PTHR13256 1 147 2.1E-36 T 22-04-2016 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 Pfam PF02561 Flagellar protein FliS 6 122 2.7E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 PIRSF PIRSF039090 1 133 1.5E-45 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 6 122 3.7E-30 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 PANTHER PTHR34773 1 129 5.0E-45 T 22-04-2016 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 Gene3D G3DSA:1.20.120.340 6 127 1.5E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SAMA_RS12050 c6a630fd04864cb875b2bc3fdd39f488 136 SUPERFAMILY SSF101116 6 125 3.4E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 SMART SM00098 46 554 8.0E-43 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PRINTS PR00113 Alkaline phosphatase signature 188 198 1.4E-32 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PRINTS PR00113 Alkaline phosphatase signature 45 65 1.4E-32 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PRINTS PR00113 Alkaline phosphatase signature 143 163 1.4E-32 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PRINTS PR00113 Alkaline phosphatase signature 291 320 1.4E-32 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PANTHER PTHR11596:SF5 29 413 6.5E-98 T 22-04-2016 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PANTHER PTHR11596:SF5 486 551 6.5E-98 T 22-04-2016 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PANTHER PTHR11596 29 413 6.5E-98 T 22-04-2016 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 PANTHER PTHR11596 486 551 6.5E-98 T 22-04-2016 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 Pfam PF00245 Alkaline phosphatase 46 551 6.1E-80 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 Gene3D G3DSA:3.40.720.10 493 551 1.8E-125 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 Gene3D G3DSA:3.40.720.10 437 438 1.8E-125 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 Gene3D G3DSA:3.40.720.10 40 397 1.8E-125 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 SUPERFAMILY SSF53649 37 425 6.15E-109 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS02690 a2861df8908c1910db05db3d50bf5773 554 SUPERFAMILY SSF53649 493 551 6.15E-109 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 Pfam PF05649 Peptidase family M13 52 430 1.2E-97 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 492 504 3.3E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 474 486 3.3E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 513 529 3.3E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 584 595 3.3E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 Gene3D G3DSA:3.40.390.10 313 433 2.6E-107 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 Gene3D G3DSA:3.40.390.10 473 686 2.6E-107 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 SUPERFAMILY SSF55486 35 686 2.49E-210 T 22-04-2016 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PANTHER PTHR11733 42 686 8.5E-200 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 PANTHER PTHR11733:SF65 42 686 8.5E-200 T 22-04-2016 SAMA_RS02065 90260a1c5855c99287f50dd404433c03 686 Pfam PF01431 Peptidase family M13 482 682 1.0E-74 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 25.0 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 Pfam PF02096 60Kd inner membrane protein 353 532 4.9E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 3.5E-70 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 5.6E-24 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.6E-24 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 5.6E-24 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PANTHER PTHR12428:SF14 171 541 6.7E-131 T 22-04-2016 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 461 483 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 73 94 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 250 265 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 164 184 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 217 235 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 499 522 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 323 343 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 414 437 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.8E-94 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 1.3E-111 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 Pfam PF14849 YidC periplasmic domain 68 342 1.1E-84 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SAMA_RS00045 6a3205acc147e12759949284bdab4e9f 541 PANTHER PTHR12428 171 541 6.7E-131 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SAMA_RS03145 8c71cbc1cccdeb6a6c793c21dcb50091 233 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 7.2E-102 T 22-04-2016 IPR021974 Protein of unknown function DUF3581 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 SUPERFAMILY SSF81324 27 241 4.32E-52 T 22-04-2016 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 22 50 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 184 206 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 90 110 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 213 239 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 64 87 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 155 178 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PRINTS PR00169 Potassium channel signature 126 152 7.0E-33 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 Pfam PF00520 Ion transport protein 29 241 2.6E-30 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PANTHER PTHR11537:SF137 8 277 6.5E-98 T 22-04-2016 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 PANTHER PTHR11537 8 277 6.5E-98 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SAMA_RS11040 87b1e27220e1962e0b52c32560b6c044 278 Gene3D G3DSA:1.10.287.70 30 240 3.3E-52 T 22-04-2016 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 PANTHER PTHR33694:SF1 1 306 9.6E-138 T 22-04-2016 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 PANTHER PTHR33694 1 306 9.6E-138 T 22-04-2016 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 SUPERFAMILY SSF54211 3 126 9.1E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 SUPERFAMILY SSF54211 135 277 1.52E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 Gene3D G3DSA:3.30.230.20 3 126 1.0E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 51.026 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 Gene3D G3DSA:3.30.1700.10 129 283 2.1E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 298 3.9E-135 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SAMA_RS01915 6c8fa70f6994a38c5a92a866dfbed584 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 5.5E-110 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SAMA_RS11050 2e54bd13ce107b1dbef1fbaab4cd2dc1 186 Gene3D G3DSA:3.10.180.10 1 186 9.2E-65 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11050 2e54bd13ce107b1dbef1fbaab4cd2dc1 186 Pfam PF06185 YecM protein 3 184 1.0E-61 T 22-04-2016 IPR010393 Protein of unknown function DUF991 SAMA_RS11050 2e54bd13ce107b1dbef1fbaab4cd2dc1 186 SUPERFAMILY SSF54593 2 185 1.74E-63 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11050 2e54bd13ce107b1dbef1fbaab4cd2dc1 186 PANTHER PTHR37519 1 186 7.3E-72 T 22-04-2016 SAMA_RS11050 2e54bd13ce107b1dbef1fbaab4cd2dc1 186 PANTHER PTHR37519:SF1 1 186 7.3E-72 T 22-04-2016 SAMA_RS08210 19d1378e8bc27b04f2114ae0fe3e79e3 135 PIRSF PIRSF028777 4 135 3.8E-51 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 SAMA_RS08210 19d1378e8bc27b04f2114ae0fe3e79e3 135 Pfam PF03733 Inner membrane component domain 7 57 1.9E-16 T 22-04-2016 IPR005185 Inner membrane component domain SAMA_RS08210 19d1378e8bc27b04f2114ae0fe3e79e3 135 Pfam PF03733 Inner membrane component domain 79 129 3.2E-18 T 22-04-2016 IPR005185 Inner membrane component domain SAMA_RS08210 19d1378e8bc27b04f2114ae0fe3e79e3 135 PANTHER PTHR31503:SF17 1 132 1.9E-44 T 22-04-2016 SAMA_RS08210 19d1378e8bc27b04f2114ae0fe3e79e3 135 PANTHER PTHR31503 1 132 1.9E-44 T 22-04-2016 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 442 29.459 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 356 1.8E-128 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 PANTHER PTHR30008:SF0 1 444 3.2E-173 T 22-04-2016 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 Pfam PF02601 Exonuclease VII, large subunit 125 438 2.4E-95 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 Pfam PF13742 OB-fold nucleic acid binding domain 9 101 1.8E-30 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SAMA_RS12345 f418e497e252fc06adca4c827ddc6b2b 447 PANTHER PTHR30008 1 444 3.2E-173 T 22-04-2016 SAMA_RS07520 caef168e00155314be9030359160c326 386 Pfam PF13181 Tetratricopeptide repeat 309 336 0.047 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS07520 caef168e00155314be9030359160c326 386 PANTHER PTHR23083 301 380 1.8E-16 T 22-04-2016 SAMA_RS07520 caef168e00155314be9030359160c326 386 PANTHER PTHR23083 182 270 1.8E-16 T 22-04-2016 SAMA_RS07520 caef168e00155314be9030359160c326 386 SUPERFAMILY SSF48452 203 371 1.9E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS07520 caef168e00155314be9030359160c326 386 PANTHER PTHR23083:SF414 301 380 1.8E-16 T 22-04-2016 SAMA_RS07520 caef168e00155314be9030359160c326 386 PANTHER PTHR23083:SF414 182 270 1.8E-16 T 22-04-2016 SAMA_RS07520 caef168e00155314be9030359160c326 386 SMART SM00028 339 372 0.55 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS07520 caef168e00155314be9030359160c326 386 SMART SM00028 237 270 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS07520 caef168e00155314be9030359160c326 386 SMART SM00028 305 338 0.36 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS07520 caef168e00155314be9030359160c326 386 Gene3D G3DSA:1.25.40.10 203 380 1.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 PANTHER PTHR30349:SF28 10 180 2.9E-128 T 22-04-2016 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 PANTHER PTHR30349:SF28 197 318 2.9E-128 T 22-04-2016 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 Pfam PF00589 Phage integrase family 106 304 2.3E-41 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 SUPERFAMILY SSF56349 1 305 2.27E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 Gene3D G3DSA:1.10.443.10 106 306 1.8E-43 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 PANTHER PTHR30349 10 180 2.9E-128 T 22-04-2016 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 PANTHER PTHR30349 197 318 2.9E-128 T 22-04-2016 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 89 3.3E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SAMA_RS07065 340f2bf45c0426ab9b08ecd1b234eaa6 318 TIGRFAM TIGR02249 integrase_gron: integron integrase 6 318 6.0E-121 T 22-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 SAMA_RS11380 5c8fcf1c11a9b43316e738c63cab2f82 125 Gene3D G3DSA:3.10.180.10 7 120 3.8E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11380 5c8fcf1c11a9b43316e738c63cab2f82 125 SUPERFAMILY SSF54593 4 121 4.03E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS11380 5c8fcf1c11a9b43316e738c63cab2f82 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 118 1.1E-5 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 SMART SM00382 30 216 2.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 Gene3D G3DSA:3.40.50.300 1 221 8.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 SUPERFAMILY SSF52540 1 222 9.53E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 PANTHER PTHR24220:SF578 3 222 3.0E-117 T 22-04-2016 SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 Pfam PF00005 ABC transporter 21 168 4.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07640 eb355e546def27b88766cd89cd3d2ad2 230 PANTHER PTHR24220 3 222 3.0E-117 T 22-04-2016 SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 PIRSF PIRSF000013 1 187 2.0E-40 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 9 186 8.2E-53 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 PANTHER PTHR30333 1 186 5.3E-74 T 22-04-2016 SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 Gene3D G3DSA:1.10.3820.10 10 186 1.5E-22 T 22-04-2016 SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 SUPERFAMILY SSF48695 6 185 1.85E-42 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS18050 1866c43b02804522cb7fefd2665538e4 187 PANTHER PTHR30333:SF3 1 186 5.3E-74 T 22-04-2016 SAMA_RS18275 ca661c644ea85284988b1bb3e309a917 141 Pfam PF12680 SnoaL-like domain 27 124 6.3E-11 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SAMA_RS18275 ca661c644ea85284988b1bb3e309a917 141 Gene3D G3DSA:3.10.450.50 22 129 8.3E-18 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS18275 ca661c644ea85284988b1bb3e309a917 141 SUPERFAMILY SSF54427 20 129 2.7E-26 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 Pfam PF00082 Subtilase family 168 461 2.4E-15 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 Gene3D G3DSA:3.40.50.200 223 498 7.3E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 Gene3D G3DSA:3.40.50.200 167 189 7.3E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 Gene3D G3DSA:2.60.40.60 1026 1128 5.3E-6 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 SUPERFAMILY SSF49313 1026 1134 1.47E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SAMA_RS02965 5bc9143a5f87415e4d2913f5e4e5221c 1261 SUPERFAMILY SSF52743 58 512 1.28E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SAMA_RS03580 21825591591d5d26ade19d10fa8cd9e9 125 Gene3D G3DSA:2.30.29.50 5 102 8.9E-43 T 22-04-2016 IPR012544 Bacterial Pleckstrin homology domain SAMA_RS03580 21825591591d5d26ade19d10fa8cd9e9 125 SUPERFAMILY SSF50729 7 124 2.17E-45 T 22-04-2016 IPR011993 PH domain-like SAMA_RS03580 21825591591d5d26ade19d10fa8cd9e9 125 Pfam PF08000 Bacterial PH domain 3 122 5.3E-47 T 22-04-2016 IPR012544 Bacterial Pleckstrin homology domain SAMA_RS03580 21825591591d5d26ade19d10fa8cd9e9 125 PANTHER PTHR35796 1 124 2.2E-45 T 22-04-2016 SAMA_RS04845 3bacb7d77d9d1fdea3f6d5b5658ec9e3 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 25 2.6E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04845 3bacb7d77d9d1fdea3f6d5b5658ec9e3 172 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 27 2.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS04845 3bacb7d77d9d1fdea3f6d5b5658ec9e3 172 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 6 142 4.0E-20 T 22-04-2016 IPR013362 Pilus modification type IV, PilV SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 7.8E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 PANTHER PTHR38689:SF1 2 115 7.8E-56 T 22-04-2016 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 Gene3D G3DSA:1.20.1300.10 1 115 6.3E-37 T 22-04-2016 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 8.6E-9 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 PANTHER PTHR38689 2 115 7.8E-56 T 22-04-2016 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 SUPERFAMILY SSF81343 4 115 5.45E-29 T 22-04-2016 SAMA_RS07415 d000b6fc4b53b582bf43f4a4ebd725ea 115 PIRSF PIRSF000169 1 115 4.2E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 SUPERFAMILY SSF103088 62 177 1.96E-32 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 Gene3D G3DSA:3.30.1330.60 64 177 5.5E-32 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 Pfam PF00691 OmpA family 77 172 3.6E-21 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 178 3.8E-41 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 PRINTS PR01021 OMPA domain signature 123 139 1.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 PRINTS PR01021 OMPA domain signature 108 123 1.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 PRINTS PR01021 OMPA domain signature 78 100 1.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 PANTHER PTHR30128:SF18 60 178 5.1E-50 T 22-04-2016 SAMA_RS10905 013e6baa7232452099813178f2e70ed8 178 PANTHER PTHR30128 60 178 5.1E-50 T 22-04-2016 SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 Gene3D G3DSA:3.40.50.1820 30 332 2.0E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 Pfam PF01738 Dienelactone hydrolase family 47 166 1.9E-7 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 SUPERFAMILY SSF53474 220 332 4.87E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 SUPERFAMILY SSF53474 16 167 4.87E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 PANTHER PTHR17630 15 333 1.0E-83 T 22-04-2016 SAMA_RS14175 11b0d6f8e9fcc6e4da202512f1e68cc6 333 PANTHER PTHR17630:SF49 15 333 1.0E-83 T 22-04-2016 SAMA_RS04135 a9da249fc96660fda1dc54db049f5246 270 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 18 65 2.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS04135 a9da249fc96660fda1dc54db049f5246 270 Gene3D G3DSA:1.10.260.40 8 65 9.1E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS04135 a9da249fc96660fda1dc54db049f5246 270 SMART SM00530 5 62 0.0027 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SAMA_RS04135 a9da249fc96660fda1dc54db049f5246 270 SUPERFAMILY SSF47413 17 65 2.22E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 PANTHER PTHR11730:SF6 1 80 2.4E-137 T 22-04-2016 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 PANTHER PTHR11730:SF6 99 408 2.4E-137 T 22-04-2016 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 PANTHER PTHR11730 1 80 2.4E-137 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 PANTHER PTHR11730 99 408 2.4E-137 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 16 409 1.2E-199 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 Pfam PF00909 Ammonium Transporter Family 23 405 3.3E-96 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 Gene3D G3DSA:1.10.3430.10 31 402 1.6E-102 T 22-04-2016 IPR029020 Ammonium/urea transporter SAMA_RS03455 ae379d4c46b248e92f468fb11047e224 416 SUPERFAMILY SSF111352 18 387 2.48E-101 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 Pfam PF00471 Ribosomal protein L33 9 55 8.9E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 SUPERFAMILY SSF57829 3 55 2.14E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 14.709 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 PANTHER PTHR15238 1 57 3.0E-26 T 22-04-2016 SAMA_RS01765 5052e865a5e71064f7dba700d65daeda 57 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 57 1.1E-25 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS19095 bfe4c5de9bb27fd86ebae1a109dcaeb0 575 Pfam PF08885 GSCFA family 44 301 1.3E-52 T 22-04-2016 IPR014982 GSCFA SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 PANTHER PTHR30469 4 358 6.0E-62 T 22-04-2016 SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 Gene3D G3DSA:2.40.50.100 60 89 1.4E-14 T 22-04-2016 SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 Gene3D G3DSA:2.40.50.100 150 181 1.4E-14 T 22-04-2016 SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 PANTHER PTHR30469:SF10 4 358 6.0E-62 T 22-04-2016 SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 249 9.5E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 SUPERFAMILY SSF111369 47 267 2.35E-27 T 22-04-2016 SAMA_RS03560 a9aadebcc36fa43659cc3ce07b3147f6 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 354 3.2E-60 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 130 2.3E-36 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 PIRSF PIRSF002889 1 132 1.3E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 PANTHER PTHR30435 2 132 5.9E-50 T 22-04-2016 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 PANTHER PTHR30435:SF12 2 132 5.9E-50 T 22-04-2016 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 Pfam PF00460 Flagella basal body rod protein 22 39 6.9E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12130 d9215e8302ac9ca377b55d065d30cf94 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SAMA_RS15215 a8e9dab285dd7c1863d818294d0265e4 492 PANTHER PTHR34473:SF1 2 461 9.8E-42 T 22-04-2016 SAMA_RS15215 a8e9dab285dd7c1863d818294d0265e4 492 PIRSF PIRSF026631 11 477 9.5E-54 T 22-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 SAMA_RS15215 a8e9dab285dd7c1863d818294d0265e4 492 Pfam PF03703 Bacterial PH domain 70 149 4.4E-17 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SAMA_RS15215 a8e9dab285dd7c1863d818294d0265e4 492 Pfam PF03703 Bacterial PH domain 405 477 7.7E-11 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SAMA_RS15215 a8e9dab285dd7c1863d818294d0265e4 492 PANTHER PTHR34473 2 461 9.8E-42 T 22-04-2016 SAMA_RS12320 92fc933f9c88f99bfce3cbda8f1bd1ef 126 SUPERFAMILY SSF54593 1 123 1.35E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS12320 92fc933f9c88f99bfce3cbda8f1bd1ef 126 PANTHER PTHR36113 2 123 6.2E-12 T 22-04-2016 SAMA_RS12320 92fc933f9c88f99bfce3cbda8f1bd1ef 126 Gene3D G3DSA:3.10.180.10 2 124 3.5E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS12320 92fc933f9c88f99bfce3cbda8f1bd1ef 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 1.5E-5 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 SUPERFAMILY SSF54506 2 275 1.89E-57 T 22-04-2016 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 Gene3D G3DSA:3.10.310.10 122 263 2.2E-49 T 22-04-2016 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 PANTHER PTHR31689:SF0 2 275 1.1E-142 T 22-04-2016 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 275 38.759 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 Gene3D G3DSA:3.10.310.10 2 121 7.8E-51 T 22-04-2016 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 274 4.7E-98 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 PANTHER PTHR31689 2 275 1.1E-142 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 Pfam PF01678 Diaminopimelate epimerase 4 122 2.2E-34 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16915 26d9f45be93b816adb7d2b6d74e05fd9 275 Pfam PF01678 Diaminopimelate epimerase 153 267 8.8E-29 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 116 1.1E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.17 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 111 2.0E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 PANTHER PTHR10072 6 116 1.9E-49 T 22-04-2016 SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 SUPERFAMILY SSF89360 8 102 3.66E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS04415 85d7a0f70d5ba4fb7eeac0380b4139fe 116 Gene3D G3DSA:2.60.300.12 7 102 8.8E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 Gene3D G3DSA:3.40.1130.10 419 563 2.5E-14 T 22-04-2016 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 SUPERFAMILY SSF103473 7 422 3.14E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 PANTHER PTHR10434 339 618 3.6E-144 T 22-04-2016 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 Gene3D G3DSA:1.20.1250.20 218 418 2.7E-8 T 22-04-2016 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 Gene3D G3DSA:1.20.1250.20 15 190 4.5E-5 T 22-04-2016 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 Pfam PF01553 Acyltransferase 436 563 1.6E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 Pfam PF07690 Major Facilitator Superfamily 42 380 7.0E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 SUPERFAMILY SSF69593 398 599 9.94E-27 T 22-04-2016 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 SMART SM00563 450 566 4.9E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS00945 54a6450f105a0b178e812bb37905d3ce 618 PANTHER PTHR10434:SF15 339 618 3.6E-144 T 22-04-2016 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 SUPERFAMILY SSF56935 33 231 3.89E-105 T 22-04-2016 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 SUPERFAMILY SSF56935 289 849 3.89E-105 T 22-04-2016 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 PANTHER PTHR30069:SF7 7 734 1.3E-120 T 22-04-2016 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 Gene3D G3DSA:2.40.170.20 167 229 2.9E-91 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 Gene3D G3DSA:2.40.170.20 265 849 2.9E-91 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 PANTHER PTHR30069 7 734 1.3E-120 T 22-04-2016 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 166 4.5E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 Pfam PF00593 TonB dependent receptor 544 847 2.3E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13720 d00d86a27bc4a728f2700c6df6184dfd 849 Gene3D G3DSA:2.170.130.10 36 166 2.7E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS19200 557ac09aa66dc468c256b50f7b35556a 160 SUPERFAMILY SSF55729 1 158 7.15E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS19200 557ac09aa66dc468c256b50f7b35556a 160 Pfam PF00583 Acetyltransferase (GNAT) family 58 136 6.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS19200 557ac09aa66dc468c256b50f7b35556a 160 PANTHER PTHR13947:SF7 3 159 2.9E-62 T 22-04-2016 SAMA_RS19200 557ac09aa66dc468c256b50f7b35556a 160 PANTHER PTHR13947 3 159 2.9E-62 T 22-04-2016 SAMA_RS19200 557ac09aa66dc468c256b50f7b35556a 160 Gene3D G3DSA:3.40.630.30 1 158 1.5E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 Pfam PF00293 NUDIX domain 5 115 1.1E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 PANTHER PTHR22769:SF14 1 137 6.3E-25 T 22-04-2016 SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 SUPERFAMILY SSF55811 2 136 2.71E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 Gene3D G3DSA:3.90.79.10 2 138 8.2E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SAMA_RS10745 e48fc5ed04c186e9030bee0b76e2631c 157 PANTHER PTHR22769 1 137 6.3E-25 T 22-04-2016 SAMA_RS14155 ddba92959cf0391467cffc59c2445a98 386 PANTHER PTHR21624:SF2 203 361 6.5E-20 T 22-04-2016 SAMA_RS14155 ddba92959cf0391467cffc59c2445a98 386 Pfam PF00146 NADH dehydrogenase 77 166 3.5E-4 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SAMA_RS14155 ddba92959cf0391467cffc59c2445a98 386 Pfam PF04116 Fatty acid hydroxylase superfamily 210 343 3.9E-28 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 SAMA_RS14155 ddba92959cf0391467cffc59c2445a98 386 PANTHER PTHR21624 203 361 6.5E-20 T 22-04-2016 SAMA_RS04855 9d829211669843b59a17d2e2fde719fa 156 Pfam PF14341 PilX N-terminal 5 54 3.7E-9 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain SAMA_RS05245 b52e9d9b4ddfa09b12d3572750873420 280 PANTHER PTHR33525:SF2 11 280 4.3E-117 T 22-04-2016 SAMA_RS05245 b52e9d9b4ddfa09b12d3572750873420 280 SUPERFAMILY SSF109604 13 262 2.93E-50 T 22-04-2016 SAMA_RS05245 b52e9d9b4ddfa09b12d3572750873420 280 Pfam PF08668 HDOD domain 22 210 4.1E-39 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS05245 b52e9d9b4ddfa09b12d3572750873420 280 Gene3D G3DSA:1.10.3150.10 12 264 1.2E-57 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS05245 b52e9d9b4ddfa09b12d3572750873420 280 PANTHER PTHR33525 11 280 4.3E-117 T 22-04-2016 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 SUPERFAMILY SSF56235 13 429 3.47E-145 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Gene3D G3DSA:2.160.20.60 1212 1463 9.2E-94 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 SUPERFAMILY SSF69336 1212 1463 5.89E-89 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Gene3D G3DSA:3.20.20.70 438 775 1.1E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Gene3D G3DSA:3.20.20.70 810 1192 3.7E-163 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Pfam PF04898 Glutamate synthase central domain 458 736 1.5E-102 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 PANTHER PTHR11938:SF1 2 1473 0.0 T 22-04-2016 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 PANTHER PTHR11938 2 1473 0.0 T 22-04-2016 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Pfam PF01493 GXGXG motif 1235 1419 8.2E-73 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 SUPERFAMILY SSF51395 435 1192 2.06E-251 T 22-04-2016 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Pfam PF01645 Conserved region in glutamate synthase 794 1156 6.1E-151 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.7E-169 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SAMA_RS04485 c3ce9d59ac663af1c5feb2183740fbdd 1483 Gene3D G3DSA:3.60.20.10 13 435 6.2E-165 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 Pfam PF01584 CheW-like domain 20 156 2.2E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 PANTHER PTHR22617:SF26 15 164 1.5E-104 T 22-04-2016 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 Gene3D G3DSA:2.40.50.180 59 94 7.1E-10 T 22-04-2016 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 PANTHER PTHR22617 15 164 1.5E-104 T 22-04-2016 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 Gene3D G3DSA:2.30.30.40 95 146 2.5E-7 T 22-04-2016 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 SUPERFAMILY SSF50341 15 158 5.49E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS11900 1bb00ba1cd2ddc2aee2ed674a6db710a 164 SMART SM00260 16 153 7.6E-49 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SAMA_RS17375 ad3c862f4be836834497f7684ee12a12 471 Gene3D G3DSA:3.30.360.30 167 471 4.9E-141 T 22-04-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 SAMA_RS17375 ad3c862f4be836834497f7684ee12a12 471 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 14 153 6.3E-33 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SAMA_RS17375 ad3c862f4be836834497f7684ee12a12 471 Gene3D G3DSA:3.40.50.720 5 166 9.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17375 ad3c862f4be836834497f7684ee12a12 471 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 157 437 2.6E-24 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal SAMA_RS09765 39b8b8a1fc29fe3fa44a26df4cf53611 231 SUPERFAMILY SSF52540 48 161 1.27E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09765 39b8b8a1fc29fe3fa44a26df4cf53611 231 PANTHER PTHR35369:SF1 31 196 1.9E-16 T 22-04-2016 SAMA_RS09765 39b8b8a1fc29fe3fa44a26df4cf53611 231 PANTHER PTHR35369 31 196 1.9E-16 T 22-04-2016 SAMA_RS09765 39b8b8a1fc29fe3fa44a26df4cf53611 231 PIRSF PIRSF037290 5 226 9.2E-46 T 22-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 SAMA_RS09765 39b8b8a1fc29fe3fa44a26df4cf53611 231 Gene3D G3DSA:3.40.50.300 48 161 2.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14705 c2cc4614641cea73d46f7b44c3b75337 226 Pfam PF00483 Nucleotidyl transferase 2 111 2.0E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SAMA_RS14705 c2cc4614641cea73d46f7b44c3b75337 226 PANTHER PTHR22572:SF15 2 222 4.2E-46 T 22-04-2016 SAMA_RS14705 c2cc4614641cea73d46f7b44c3b75337 226 SUPERFAMILY SSF53448 1 221 3.03E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS14705 c2cc4614641cea73d46f7b44c3b75337 226 Gene3D G3DSA:3.90.550.10 1 221 1.2E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS14705 c2cc4614641cea73d46f7b44c3b75337 226 PANTHER PTHR22572 2 222 4.2E-46 T 22-04-2016 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 PANTHER PTHR38042 1 237 2.2E-59 T 22-04-2016 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 Gene3D G3DSA:3.40.50.10090 116 237 7.1E-11 T 22-04-2016 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 Gene3D G3DSA:3.40.50.10090 6 108 1.3E-8 T 22-04-2016 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 229 6.3E-34 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 PANTHER PTHR38042:SF1 1 237 2.2E-59 T 22-04-2016 SAMA_RS16945 03806cb4e4cbec93e4f0737e734d9b33 239 SUPERFAMILY SSF69618 1 237 9.55E-53 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SAMA_RS04175 a97048a77978f534e9dc67243dc8aca3 369 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 349 3.1E-122 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 SAMA_RS04175 a97048a77978f534e9dc67243dc8aca3 369 PANTHER PTHR33529 2 369 1.2E-119 T 22-04-2016 SAMA_RS04175 a97048a77978f534e9dc67243dc8aca3 369 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 349 6.0E-76 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SAMA_RS04175 a97048a77978f534e9dc67243dc8aca3 369 PANTHER PTHR33529:SF2 2 369 1.2E-119 T 22-04-2016 SAMA_RS11200 4106bb066bfe89b0fc1be44a992e9f78 62 Pfam PF14056 Domain of unknown function (DUF4250) 11 59 3.7E-13 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 Gene3D G3DSA:3.40.50.300 293 568 7.9E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 SUPERFAMILY SSF52540 167 564 6.61E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 SUPERFAMILY SSF160246 4 145 2.88E-39 T 22-04-2016 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 PANTHER PTHR30258 1 575 0.0 T 22-04-2016 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 6.4E-26 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 Pfam PF00437 Type II/IV secretion system protein 193 455 3.0E-75 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 SMART SM00382 316 437 0.0041 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 PANTHER PTHR30258:SF11 1 575 0.0 T 22-04-2016 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 Gene3D G3DSA:3.30.450.90 167 288 6.5E-46 T 22-04-2016 SAMA_RS02455 e7cb117cc37d7e13c68224e59e800fd4 587 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 Gene3D G3DSA:1.10.439.10 47 187 5.5E-38 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 Pfam PF01804 Penicillin amidase 48 851 3.4E-131 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 SUPERFAMILY SSF56235 48 860 2.57E-158 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 Gene3D G3DSA:3.60.20.10 438 659 1.2E-88 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 Gene3D G3DSA:3.60.20.10 188 217 1.2E-88 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 Gene3D G3DSA:3.60.20.10 270 356 1.2E-88 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 PANTHER PTHR34218 118 863 0.0 T 22-04-2016 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 PANTHER PTHR34218 1 101 0.0 T 22-04-2016 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 PANTHER PTHR34218:SF3 118 863 0.0 T 22-04-2016 SAMA_RS14500 b020c492606ac48c8b6c6bdf30ca5dfa 866 PANTHER PTHR34218:SF3 1 101 0.0 T 22-04-2016 SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 PANTHER PTHR21047 1 175 4.5E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 Gene3D G3DSA:2.60.120.10 1 173 1.2E-77 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 171 4.1E-75 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 SUPERFAMILY SSF51182 1 174 7.79E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 8.4E-72 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 PANTHER PTHR21047:SF2 1 175 4.5E-71 T 22-04-2016 SAMA_RS11730 9fc0759ca6829160fca882ecaf0b144f 176 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 173 6.0E-99 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SAMA_RS17620 2ac247f416d407dfff13bbab46862536 143 PANTHER PTHR31793:SF9 8 142 1.7E-36 T 22-04-2016 SAMA_RS17620 2ac247f416d407dfff13bbab46862536 143 PANTHER PTHR31793 8 142 1.7E-36 T 22-04-2016 SAMA_RS17620 2ac247f416d407dfff13bbab46862536 143 SUPERFAMILY SSF54637 8 138 7.02E-32 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17620 2ac247f416d407dfff13bbab46862536 143 Pfam PF13279 Thioesterase-like superfamily 15 131 9.6E-11 T 22-04-2016 SAMA_RS17620 2ac247f416d407dfff13bbab46862536 143 Gene3D G3DSA:3.10.129.10 7 133 1.3E-35 T 22-04-2016 IPR029069 HotDog domain SAMA_RS03395 82cd5c1664fca9a69af8d8028307580b 70 Gene3D G3DSA:1.20.5.300 2 50 2.7E-8 T 22-04-2016 SAMA_RS03395 82cd5c1664fca9a69af8d8028307580b 70 PANTHER PTHR36508 1 70 3.4E-24 T 22-04-2016 SAMA_RS03395 82cd5c1664fca9a69af8d8028307580b 70 Pfam PF04102 SlyX 4 70 8.5E-21 T 22-04-2016 IPR007236 SlyX SAMA_RS03395 82cd5c1664fca9a69af8d8028307580b 70 Hamap MF_00715 Protein SlyX [slyX]. 3 70 15.165 T 22-04-2016 IPR007236 SlyX SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 PANTHER PTHR30333 1 391 2.6E-249 T 22-04-2016 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 17 187 1.4E-70 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 391 1.1E-151 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 PANTHER PTHR30333:SF1 1 391 2.6E-249 T 22-04-2016 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 PIRSF PIRSF000014 1 391 6.4E-159 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 Gene3D G3DSA:1.10.3820.10 17 188 8.0E-29 T 22-04-2016 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 Gene3D G3DSA:1.10.3820.10 336 342 8.0E-29 T 22-04-2016 SAMA_RS05160 186685dcf10e04e1ac05d3962c1ddfd3 391 SUPERFAMILY SSF48695 13 189 5.21E-59 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 PANTHER PTHR30160:SF12 1 342 3.0E-147 T 22-04-2016 SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 SUPERFAMILY SSF53756 9 341 8.48E-81 T 22-04-2016 SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 Gene3D G3DSA:3.40.50.2000 164 342 7.0E-44 T 22-04-2016 SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 PANTHER PTHR30160 1 342 3.0E-147 T 22-04-2016 SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 301 2.3E-48 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SAMA_RS00515 0413c84c390fc1e9aa26f6a568a86d1c 350 Gene3D G3DSA:3.40.50.2000 13 152 1.4E-22 T 22-04-2016 SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 Pfam PF09423 PhoD-like phosphatase 295 525 2.4E-7 T 22-04-2016 IPR018946 Alkaline phosphatase D-related SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 Gene3D G3DSA:3.60.21.10 131 160 5.5E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 Gene3D G3DSA:3.60.21.10 391 437 5.5E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 Gene3D G3DSA:3.60.21.10 270 340 5.5E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 PANTHER PTHR37031:SF2 294 622 1.2E-121 T 22-04-2016 SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 PANTHER PTHR37031:SF2 116 225 1.2E-121 T 22-04-2016 SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 SUPERFAMILY SSF56300 389 549 6.73E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 SUPERFAMILY SSF56300 127 178 6.73E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 SUPERFAMILY SSF56300 298 340 6.73E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 PANTHER PTHR37031 294 622 1.2E-121 T 22-04-2016 SAMA_RS02720 88b09ec8e24718fccd38beac2fc12c40 623 PANTHER PTHR37031 116 225 1.2E-121 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 Gene3D G3DSA:3.30.420.40 2 134 2.2E-36 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 Pfam PF00480 ROK family 5 296 5.1E-76 T 22-04-2016 IPR000600 ROK family SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 PANTHER PTHR18964:SF134 1 296 4.3E-97 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 Gene3D G3DSA:3.30.420.40 135 278 9.6E-45 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 PANTHER PTHR18964 1 296 4.3E-97 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 SUPERFAMILY SSF53067 1 297 1.19E-62 T 22-04-2016 SAMA_RS07320 e49a41e7474a473e8cc49a53ba991de0 310 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 PANTHER PTHR24023 77 388 4.2E-31 T 22-04-2016 SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 Pfam PF02515 CoA-transferase family III 5 377 4.6E-129 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 PANTHER PTHR24023:SF593 77 388 4.2E-31 T 22-04-2016 SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 Gene3D G3DSA:3.40.50.10540 311 384 5.0E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 Gene3D G3DSA:3.40.50.10540 2 222 5.0E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 Gene3D G3DSA:3.30.1540.10 228 310 1.2E-34 T 22-04-2016 SAMA_RS17195 13d2211153516b789999f3e06d4c045e 389 SUPERFAMILY SSF89796 3 384 5.89E-137 T 22-04-2016 IPR023606 CoA-transferase family III domain SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 320 43.554 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 Gene3D G3DSA:3.40.190.80 185 319 5.3E-52 T 22-04-2016 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 295 320 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 167 190 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 136 159 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 193 220 9.2E-62 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 180 1.6E-61 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 Gene3D G3DSA:3.30.540.10 4 180 4.3E-69 T 22-04-2016 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PIRSF PIRSF500210 1 320 1.9E-116 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 SUPERFAMILY SSF56655 2 319 1.04E-104 T 22-04-2016 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PIRSF PIRSF000904 1 320 2.9E-115 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS03185 bdbf50bd1fe37173942c5deacc5f05d2 320 PANTHER PTHR11556 4 319 8.1E-143 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SAMA_RS09495 e901d25ee424b13aa6fd471b0f843171 153 Pfam PF02810 SEC-C motif 133 151 8.0E-9 T 22-04-2016 IPR004027 SEC-C motif SAMA_RS09495 e901d25ee424b13aa6fd471b0f843171 153 PANTHER PTHR33747 9 151 2.1E-19 T 22-04-2016 SAMA_RS09495 e901d25ee424b13aa6fd471b0f843171 153 SUPERFAMILY SSF103642 131 150 1.14E-6 T 22-04-2016 SAMA_RS09495 e901d25ee424b13aa6fd471b0f843171 153 Gene3D G3DSA:3.10.450.50 2 151 2.2E-44 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS09495 e901d25ee424b13aa6fd471b0f843171 153 SUPERFAMILY SSF54427 24 125 4.82E-27 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 PANTHER PTHR10434:SF20 1 233 1.6E-132 T 22-04-2016 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 SMART SM00563 66 181 7.8E-33 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 Gene3D G3DSA:3.40.1130.10 58 230 1.7E-14 T 22-04-2016 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 PANTHER PTHR10434 1 233 1.6E-132 T 22-04-2016 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 Pfam PF01553 Acyltransferase 62 177 1.3E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 SUPERFAMILY SSF69593 4 233 1.83E-44 T 22-04-2016 SAMA_RS16370 667a00995fe31ec3431575604fb23d7c 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 177 5.5E-42 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 PIRSF PIRSF012524 1 276 1.7E-74 T 22-04-2016 IPR014464 Conserved virulence factor B SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 Pfam PF13509 S1 domain 4 64 1.2E-22 T 22-04-2016 SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 SMART SM00316 144 206 0.71 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 SMART SM00316 69 131 43.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 SMART SM00316 3 65 19.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 SAMA_RS10270 d58e26a2bcbf1052bcd469f038a5398a 276 PANTHER PTHR37296 1 275 2.1E-107 T 22-04-2016 SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 PANTHER PTHR24220:SF160 13 236 2.4E-68 T 22-04-2016 SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 Pfam PF00005 ABC transporter 27 166 4.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 SMART SM00382 36 215 2.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 PANTHER PTHR24220 13 236 2.4E-68 T 22-04-2016 SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 Gene3D G3DSA:3.40.50.300 5 227 5.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18565 a8c1de9e101c3c03cb6aa0d953b55896 284 SUPERFAMILY SSF52540 10 230 4.64E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 PIRSF PIRSF003078 2 206 6.8E-55 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 Pfam PF02527 rRNA small subunit methyltransferase G 21 200 4.9E-56 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 202 9.5E-51 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 PANTHER PTHR31760:SF0 1 205 8.7E-78 T 22-04-2016 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 202 26.853 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 SUPERFAMILY SSF53335 4 205 1.61E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 PANTHER PTHR31760 1 205 8.7E-78 T 22-04-2016 SAMA_RS18995 d277c6feef42ba967481a42c471f3c3b 206 Gene3D G3DSA:3.40.50.150 4 203 4.2E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13730 bebb3146afe506dc4e51d68020956e69 153 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.0E-25 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 SAMA_RS13730 bebb3146afe506dc4e51d68020956e69 153 Pfam PF07308 Protein of unknown function (DUF1456) 85 152 8.2E-24 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 SAMA_RS13730 bebb3146afe506dc4e51d68020956e69 153 PANTHER PTHR37805 1 153 7.1E-63 T 22-04-2016 SAMA_RS13730 bebb3146afe506dc4e51d68020956e69 153 PANTHER PTHR37805:SF1 1 153 7.1E-63 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Gene3D G3DSA:3.30.450.20 6 118 4.8E-13 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 433 3.5E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SMART SM00267 257 434 1.5E-57 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SUPERFAMILY SSF141868 449 696 6.28E-85 T 22-04-2016 IPR001633 EAL domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Pfam PF08448 PAS fold 14 128 2.2E-7 T 22-04-2016 IPR013656 PAS fold-4 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 263 1.8E-13 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 134 1.9E-7 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Gene3D G3DSA:3.30.70.270 269 442 5.3E-53 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SMART SM00091 139 207 1.3E-5 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SMART SM00091 5 72 4.4E-4 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SUPERFAMILY SSF55785 124 255 2.74E-22 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Pfam PF00563 EAL domain 450 685 3.1E-67 T 22-04-2016 IPR001633 EAL domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SMART SM00086 215 257 2.4E-7 T 22-04-2016 IPR001610 PAC motif SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 PANTHER PTHR33121 229 245 3.0E-76 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 PANTHER PTHR33121 394 700 3.0E-76 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 429 8.3E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SUPERFAMILY SSF55785 10 129 5.48E-12 T 22-04-2016 IPR000014 PAS domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Gene3D G3DSA:3.20.20.450 448 691 4.9E-90 T 22-04-2016 IPR001633 EAL domain SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Pfam PF08447 PAS fold 162 251 5.2E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 Gene3D G3DSA:3.30.450.20 119 264 9.5E-33 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 PANTHER PTHR33121:SF13 229 245 3.0E-76 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 PANTHER PTHR33121:SF13 394 700 3.0E-76 T 22-04-2016 SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SUPERFAMILY SSF55073 273 436 4.39E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS18840 9f2dcfa4b961d10555ef4543c52eaffa 709 SMART SM00052 444 690 8.4E-105 T 22-04-2016 IPR001633 EAL domain SAMA_RS15885 6027305f8dc04e02814e0a04160f5891 391 SUPERFAMILY SSF50952 37 377 1.57E-40 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SAMA_RS15885 6027305f8dc04e02814e0a04160f5891 391 PANTHER PTHR19328:SF33 32 376 8.2E-94 T 22-04-2016 SAMA_RS15885 6027305f8dc04e02814e0a04160f5891 391 Pfam PF07995 Glucose / Sorbosone dehydrogenase 141 372 3.1E-17 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 SAMA_RS15885 6027305f8dc04e02814e0a04160f5891 391 PANTHER PTHR19328 32 376 8.2E-94 T 22-04-2016 SAMA_RS15885 6027305f8dc04e02814e0a04160f5891 391 Gene3D G3DSA:2.120.10.30 26 381 5.7E-61 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 Gene3D G3DSA:3.10.580.10 3 126 1.6E-28 T 22-04-2016 SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 SMART SM00116 80 127 0.36 T 22-04-2016 IPR000644 CBS domain SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 SMART SM00116 13 61 8.1E-5 T 22-04-2016 IPR000644 CBS domain SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 Pfam PF00571 CBS domain 6 59 1.8E-8 T 22-04-2016 IPR000644 CBS domain SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 Pfam PF00571 CBS domain 73 126 3.0E-11 T 22-04-2016 IPR000644 CBS domain SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 PANTHER PTHR11911 1 126 1.5E-23 T 22-04-2016 SAMA_RS08455 bc42d3a74f9821ea685f8fab493603d1 138 SUPERFAMILY SSF54631 1 126 1.89E-32 T 22-04-2016 SAMA_RS02545 3a817c7a8d387249dc3ac107400a35fd 482 PANTHER PTHR30624 9 482 1.5E-246 T 22-04-2016 SAMA_RS02545 3a817c7a8d387249dc3ac107400a35fd 482 Pfam PF01523 Putative modulator of DNA gyrase 37 333 6.4E-68 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS02545 3a817c7a8d387249dc3ac107400a35fd 482 PIRSF PIRSF004919 15 482 2.9E-144 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS02545 3a817c7a8d387249dc3ac107400a35fd 482 PANTHER PTHR30624:SF4 9 482 1.5E-246 T 22-04-2016 SAMA_RS02545 3a817c7a8d387249dc3ac107400a35fd 482 SUPERFAMILY SSF111283 19 481 1.31E-134 T 22-04-2016 SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 SUPERFAMILY SSF52540 20 280 1.39E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 PANTHER PTHR13696 1 272 3.6E-123 T 22-04-2016 SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 PIRSF PIRSF003092 3 284 4.3E-85 T 22-04-2016 IPR025501 ATP binding protein MinD SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 PANTHER PTHR13696:SF3 1 272 3.6E-123 T 22-04-2016 SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 23 230 1.4E-25 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS11945 9d83f0f8180dc403499dfdad56b4d463 293 Gene3D G3DSA:3.40.50.300 19 261 8.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 PANTHER PTHR30328:SF23 99 198 3.6E-18 T 22-04-2016 SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 PANTHER PTHR30328:SF23 3 79 3.6E-18 T 22-04-2016 SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 PANTHER PTHR30328 99 198 3.6E-18 T 22-04-2016 SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 PANTHER PTHR30328 3 79 3.6E-18 T 22-04-2016 SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 Pfam PF13305 WHG domain 103 186 9.7E-11 T 22-04-2016 IPR025996 WHG domain SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 SUPERFAMILY SSF48498 99 206 4.0E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 Gene3D G3DSA:1.10.357.10 1 199 5.9E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS00940 d01f7a187c8173cfb82b7a0f8b0c7a15 221 SUPERFAMILY SSF46689 8 77 3.79E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS10235 c540d3874a48f7af85ef6762fc94b916 116 Pfam PF12290 Protein of unknown function (DUF3802) 1 111 4.5E-52 T 22-04-2016 IPR020979 Uncharacterised protein family A0KLC6 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 Gene3D G3DSA:3.40.640.10 61 319 1.3E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 SUPERFAMILY SSF53383 22 420 3.5E-130 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 Pfam PF00202 Aminotransferase class-III 20 418 3.5E-132 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 Gene3D G3DSA:3.90.1150.10 321 421 3.5E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 Gene3D G3DSA:3.90.1150.10 5 60 3.5E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 PANTHER PTHR11986:SF70 1 423 3.2E-298 T 22-04-2016 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 11 418 1.0E-157 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 SAMA_RS13810 025fe25cf5fb7273d0d315fe0ff1df08 425 PANTHER PTHR11986 1 423 3.2E-298 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 Gene3D G3DSA:1.25.40.10 33 212 6.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 Pfam PF13525 Outer membrane lipoprotein 33 237 7.6E-72 T 22-04-2016 SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 251 1.5E-82 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 PANTHER PTHR37423 9 254 9.0E-82 T 22-04-2016 SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 SUPERFAMILY SSF48452 30 123 5.84E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS13640 d426e4ab91ce2614d9ebf5877bd71dc2 254 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 247 44.753 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD SAMA_RS08215 7be0d8a1abbfb56425653b986756e12e 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 267 1.3E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS08215 7be0d8a1abbfb56425653b986756e12e 307 PIRSF PIRSF006278 7 300 9.0E-21 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SAMA_RS08215 7be0d8a1abbfb56425653b986756e12e 307 SUPERFAMILY SSF53686 12 295 9.25E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SAMA_RS08215 7be0d8a1abbfb56425653b986756e12e 307 Gene3D G3DSA:3.40.50.1100 32 106 1.1E-7 T 22-04-2016 SAMA_RS08215 7be0d8a1abbfb56425653b986756e12e 307 Gene3D G3DSA:3.40.50.1100 107 290 1.5E-13 T 22-04-2016 SAMA_RS06040 cab0357d3361ee19cad795cda862e643 206 PANTHER PTHR10954 20 203 1.0E-78 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SAMA_RS06040 cab0357d3361ee19cad795cda862e643 206 Gene3D G3DSA:3.30.420.10 19 159 9.2E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS06040 cab0357d3361ee19cad795cda862e643 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 19 198 37.838 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 SAMA_RS06040 cab0357d3361ee19cad795cda862e643 206 Pfam PF01351 Ribonuclease HII 21 196 1.6E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SAMA_RS06040 cab0357d3361ee19cad795cda862e643 206 SUPERFAMILY SSF53098 15 203 8.35E-68 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 Gene3D G3DSA:3.30.300.30 430 533 6.1E-6 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 SUPERFAMILY SSF56801 4 539 4.32E-119 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 Gene3D G3DSA:3.40.50.980 176 358 1.3E-26 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 Gene3D G3DSA:3.40.50.980 6 175 4.5E-31 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 PANTHER PTHR24096:SF249 2 546 1.6E-251 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 Pfam PF00501 AMP-binding enzyme 13 428 3.4E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 PANTHER PTHR24096 2 546 1.6E-251 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 Gene3D G3DSA:2.30.38.10 363 421 5.0E-20 T 22-04-2016 SAMA_RS01410 723495bd776ee5ca2758ac4afdf0989d 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 34.912 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 1.6E-140 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 8.7E-149 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 PANTHER PTHR21090 1 424 2.4E-196 T 22-04-2016 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 Gene3D G3DSA:3.65.10.10 22 238 2.9E-69 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 SUPERFAMILY SSF55205 1 424 2.49E-142 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 PIRSF PIRSF000505 3 427 3.6E-155 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SAMA_RS09040 13b563c14f193fdbd84679b0d0602bb6 428 Gene3D G3DSA:3.65.10.10 239 422 3.1E-72 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SAMA_RS02515 4b77bd905fb870b5f3b16bf8a67709dd 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 154 1.2E-39 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SAMA_RS02515 4b77bd905fb870b5f3b16bf8a67709dd 162 Pfam PF04093 rod shape-determining protein MreD 10 154 2.2E-28 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SAMA_RS02515 4b77bd905fb870b5f3b16bf8a67709dd 162 PIRSF PIRSF018472 1 162 3.5E-53 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type SAMA_RS02515 4b77bd905fb870b5f3b16bf8a67709dd 162 PANTHER PTHR37484 1 162 2.4E-60 T 22-04-2016 SAMA_RS15845 4dca671fc610bb6a3d4091073b28ea06 287 Pfam PF02666 Phosphatidylserine decarboxylase 62 283 1.1E-61 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SAMA_RS15845 4dca671fc610bb6a3d4091073b28ea06 287 PANTHER PTHR10067 5 286 2.5E-114 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SAMA_RS15845 4dca671fc610bb6a3d4091073b28ea06 287 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 286 45.315 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SAMA_RS15845 4dca671fc610bb6a3d4091073b28ea06 287 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 50 283 4.5E-77 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SAMA_RS09200 db35123ef73a4b75b32536ca504efef9 66 PIRSF PIRSF037225 1 64 4.8E-26 T 22-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 SAMA_RS09200 db35123ef73a4b75b32536ca504efef9 66 Pfam PF14255 Cysteine-rich CPXCG 8 59 3.7E-23 T 22-04-2016 IPR025990 Cysteine-rich CPXCG protein SAMA_RS16155 ff598129a958bf4a2a6ac4e6f3d69110 83 SUPERFAMILY SSF46689 9 77 6.27E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS16155 ff598129a958bf4a2a6ac4e6f3d69110 83 Pfam PF01527 Transposase 11 74 1.0E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SAMA_RS16155 ff598129a958bf4a2a6ac4e6f3d69110 83 Gene3D G3DSA:1.10.10.60 11 80 1.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 SUPERFAMILY SSF117143 77 205 2.22E-21 T 22-04-2016 SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 PANTHER PTHR30435:SF18 1 246 1.4E-100 T 22-04-2016 SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 243 1.4E-21 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 5.3E-36 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 Pfam PF00460 Flagella basal body rod protein 5 35 1.9E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 224 3.8E-56 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 SAMA_RS12110 8eb9ebb6a9ab4d52bb0317ab5233c646 247 PANTHER PTHR30435 1 246 1.4E-100 T 22-04-2016 SAMA_RS09780 1a8ffda38de27b7ae9f355162acf2ca4 243 Pfam PF11306 Protein of unknown function (DUF3108) 16 229 1.9E-24 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 PANTHER PTHR33525:SF3 60 339 4.9E-42 T 22-04-2016 SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 SMART SM00471 193 323 5.3E-4 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 SUPERFAMILY SSF109604 103 347 4.71E-52 T 22-04-2016 SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 Pfam PF08668 HDOD domain 104 286 2.1E-32 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 PANTHER PTHR33525 60 339 4.9E-42 T 22-04-2016 SAMA_RS00110 5fd91e4d65fa4007c48e106bb1491a02 351 Gene3D G3DSA:1.10.3150.10 103 346 5.5E-48 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SAMA_RS05950 d350f80bed577a4a5c71c41fbdd291ad 115 Pfam PF12514 Protein of unknown function (DUF3718) 34 102 2.0E-23 T 22-04-2016 IPR022193 Protein of unknown function DUF3718 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 PANTHER PTHR32089:SF65 1 478 2.2E-192 T 22-04-2016 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 Gene3D G3DSA:1.10.287.950 233 445 1.8E-49 T 22-04-2016 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 SMART SM00283 215 476 6.8E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 SUPERFAMILY SSF58104 167 476 5.75E-66 T 22-04-2016 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 474 3.6E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 SMART SM00304 147 200 0.014 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 SMART SM00304 235 285 100.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 PANTHER PTHR32089 1 478 2.2E-192 T 22-04-2016 SAMA_RS03410 68567d9fab5c88b8ee90b29f81d921ab 478 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 187 468 0.002 T 22-04-2016 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 SUPERFAMILY SSF103039 3 13 6.02E-22 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 SUPERFAMILY SSF103039 51 228 6.02E-22 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PANTHER PTHR30034 2 336 4.3E-160 T 22-04-2016 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 Pfam PF02154 Flagellar motor switch protein FliM 35 227 1.3E-80 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 Gene3D G3DSA:2.30.330.10 240 323 1.3E-6 T 22-04-2016 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 209 227 2.1E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 111 130 2.1E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 86 102 2.1E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.1E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 SUPERFAMILY SSF101801 246 321 1.09E-11 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PIRSF PIRSF002888 1 327 9.5E-91 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 PANTHER PTHR30034:SF0 2 336 4.3E-160 T 22-04-2016 SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 248 317 1.7E-15 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SAMA_RS11990 bb25dd851d58aee76d87a9b6b9b7ad8d 342 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 317 8.2E-115 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 PANTHER PTHR12231:SF138 22 103 1.8E-14 T 22-04-2016 SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 SMART SM00450 9 103 1.5E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 SUPERFAMILY SSF52821 2 102 1.07E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 Pfam PF00581 Rhodanese-like domain 10 100 3.7E-17 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 Gene3D G3DSA:3.40.250.10 3 101 3.1E-29 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS00485 259be12c7f3bcb146a085e9aa3fb626a 103 PANTHER PTHR12231 22 103 1.8E-14 T 22-04-2016 SAMA_RS15940 37197c793ef9be74d38d30fc0126228a 65 Pfam PF04024 PspC domain 13 62 6.5E-10 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SAMA_RS17625 32df232b9555ea241253c3e0ffdd905e 243 SUPERFAMILY SSF89392 41 230 3.73E-16 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SAMA_RS17625 32df232b9555ea241253c3e0ffdd905e 243 Gene3D G3DSA:2.50.20.10 47 235 4.7E-11 T 22-04-2016 SAMA_RS14575 ada0b4a7aaeca5445e667992a3790f96 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 107 5.1E-9 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS14575 ada0b4a7aaeca5445e667992a3790f96 127 Gene3D G3DSA:3.10.180.10 1 114 2.0E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS14575 ada0b4a7aaeca5445e667992a3790f96 127 SUPERFAMILY SSF54593 1 121 8.06E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 SUPERFAMILY SSF47240 16 156 2.09E-41 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 Gene3D G3DSA:1.20.1260.10 3 157 5.4E-56 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PANTHER PTHR30295:SF6 1 157 1.5E-56 T 22-04-2016 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PIRSF PIRSF005900 3 157 1.5E-42 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 PANTHER PTHR30295 1 157 1.5E-56 T 22-04-2016 SAMA_RS13570 4c465a44cc0839f56eabf1fa0b0bc08d 157 Pfam PF00210 Ferritin-like domain 18 157 4.2E-28 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SAMA_RS03210 7c11d55bddf8ab924d6cda09ed5aec8d 367 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 31 362 4.3E-76 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SAMA_RS03210 7c11d55bddf8ab924d6cda09ed5aec8d 367 SUPERFAMILY SSF53187 19 104 1.22E-42 T 22-04-2016 SAMA_RS03210 7c11d55bddf8ab924d6cda09ed5aec8d 367 SUPERFAMILY SSF53187 141 364 1.22E-42 T 22-04-2016 SAMA_RS03210 7c11d55bddf8ab924d6cda09ed5aec8d 367 Gene3D G3DSA:3.40.630.10 17 268 1.9E-26 T 22-04-2016 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 PANTHER PTHR30308:SF2 2 159 1.5E-77 T 22-04-2016 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 140 1.0E-70 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 PANTHER PTHR30308 2 159 1.5E-77 T 22-04-2016 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 Gene3D G3DSA:2.40.280.10 14 135 5.8E-49 T 22-04-2016 IPR023620 Small protein B SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 SUPERFAMILY SSF74982 10 140 1.57E-48 T 22-04-2016 IPR023620 Small protein B SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 70.258 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 158 1.5E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site SAMA_RS12485 6da7e1a4aa9885de3c6d4e2170867d47 160 Pfam PF01668 SmpB protein 14 77 1.9E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 SUPERFAMILY SSF55979 245 366 2.9E-38 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 PANTHER PTHR30478 2 366 4.5E-138 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.5E-34 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 SUPERFAMILY SSF55979 1 118 6.51E-28 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 SMART SM00480 17 362 2.3E-138 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.7E-36 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 PIRSF PIRSF000804 1 366 1.2E-120 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Gene3D G3DSA:3.10.150.10 124 248 1.8E-36 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Gene3D G3DSA:3.10.150.10 249 366 1.9E-37 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.7E-39 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 4.4E-109 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 SUPERFAMILY SSF55979 125 244 4.4E-29 T 22-04-2016 SAMA_RS00060 fb6ea68c700e2d580a411e869089a603 366 Gene3D G3DSA:3.10.150.10 1 120 1.2E-32 T 22-04-2016 SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 Gene3D G3DSA:1.10.710.10 484 647 2.6E-13 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 Gene3D G3DSA:1.10.710.10 317 347 2.6E-13 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 56 654 1.1E-90 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 SUPERFAMILY SSF48695 491 644 9.93E-43 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 SUPERFAMILY SSF48695 178 328 9.93E-43 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 Gene3D G3DSA:3.90.10.10 193 316 2.0E-12 T 22-04-2016 SAMA_RS06325 82889d9cef06d4b69c3432023eb51414 656 Pfam PF14522 Cytochrome c7 and related cytochrome c 484 576 9.8E-7 T 22-04-2016 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 PIRSF PIRSF006603 3 450 9.1E-54 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 5.8E-104 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 Pfam PF01554 MatE 243 404 3.0E-34 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 Pfam PF01554 MatE 17 176 3.1E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 PANTHER PTHR11206:SF153 7 441 4.6E-204 T 22-04-2016 SAMA_RS09190 0234f22e04fb545751b83e47aa81fb0a 453 PANTHER PTHR11206 7 441 4.6E-204 T 22-04-2016 SAMA_RS04755 815270a0e895147554d5242f367ab4b2 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 59 2.7E-25 T 22-04-2016 IPR021932 Protein of unknown function DUF3545 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 PANTHER PTHR32089:SF65 1 479 2.9E-125 T 22-04-2016 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 Gene3D G3DSA:1.10.287.950 232 445 3.0E-53 T 22-04-2016 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 SMART SM00283 217 478 7.0E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 SUPERFAMILY SSF58104 170 478 1.31E-68 T 22-04-2016 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 285 475 3.2E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 SMART SM00304 150 202 0.0043 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 238 267 1.1E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 342 1.1E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 344 373 1.1E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SAMA_RS11180 ec1bf7e499a72393cdcacd5bac3881a6 479 PANTHER PTHR32089 1 479 2.9E-125 T 22-04-2016 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 PANTHER PTHR24220:SF470 3 216 1.9E-120 T 22-04-2016 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 Gene3D G3DSA:3.40.50.300 1 217 3.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.6E-87 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 PANTHER PTHR24220 3 216 1.9E-120 T 22-04-2016 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 SUPERFAMILY SSF52540 1 221 1.94E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 Pfam PF00005 ABC transporter 18 165 7.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS18030 2c8ec6fab875c63e10eba08e7180c53b 229 SMART SM00382 27 214 8.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 1.2E-212 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 396 44.707 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 2.2E-148 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 PIRSF PIRSF000521 23 398 2.3E-38 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 SUPERFAMILY SSF53383 12 397 1.46E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 PANTHER PTHR11986:SF71 8 403 3.5E-223 T 22-04-2016 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 Pfam PF00202 Aminotransferase class-III 16 395 6.5E-123 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 PANTHER PTHR11986 8 403 3.5E-223 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 Gene3D G3DSA:3.90.1150.10 302 397 1.2E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 Gene3D G3DSA:3.90.1150.10 9 55 1.2E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 Gene3D G3DSA:3.40.640.10 56 297 1.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS08505 ba48c2c7aa1ed63989352fef3e5a75ac 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS04470 0f2bc0fa18710c8a3f816d544347069e 329 PANTHER PTHR34308:SF1 11 327 2.1E-69 T 22-04-2016 SAMA_RS04470 0f2bc0fa18710c8a3f816d544347069e 329 PANTHER PTHR34308 11 327 2.1E-69 T 22-04-2016 SAMA_RS04470 0f2bc0fa18710c8a3f816d544347069e 329 Pfam PF03186 CobD/Cbib protein 25 301 1.6E-32 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PANTHER PTHR10422 13 531 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 SUPERFAMILY SSF81442 23 530 1.7E-193 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PANTHER PTHR10422:SF27 13 531 0.0 T 22-04-2016 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 255 309 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 477 9.6E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 Gene3D G3DSA:1.20.210.10 15 530 6.1E-216 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 530 1.4E-214 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 173 191 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 202 221 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 299 314 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 73 96 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 26 51 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS18120 7f41b14c41fe3a2b95ce329153f6be6e 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 253 274 4.2E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS06970 0e4b3dcfe6133c2971444c9caa9b98d3 169 PANTHER PTHR40547:SF1 1 169 1.6E-49 T 22-04-2016 SAMA_RS06970 0e4b3dcfe6133c2971444c9caa9b98d3 169 PANTHER PTHR40547 1 169 1.6E-49 T 22-04-2016 SAMA_RS06970 0e4b3dcfe6133c2971444c9caa9b98d3 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 163 1.0E-46 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 Pfam PF13242 HAD-hyrolase-like 162 207 6.5E-6 T 22-04-2016 SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 PANTHER PTHR12725 1 238 2.7E-44 T 22-04-2016 SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 PANTHER PTHR12725:SF65 1 238 2.7E-44 T 22-04-2016 SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 Gene3D G3DSA:3.40.50.1000 9 235 2.3E-24 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 SUPERFAMILY SSF56784 10 238 2.29E-30 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS16900 85eeba4e9a19e4e044f57b868e1677fb 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 201 8.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS08955 26271a8b2fbb122852c1a338741a4379 595 PANTHER PTHR33361:SF5 33 593 2.2E-221 T 22-04-2016 SAMA_RS08955 26271a8b2fbb122852c1a338741a4379 595 PANTHER PTHR33361 33 593 2.2E-221 T 22-04-2016 SAMA_RS08955 26271a8b2fbb122852c1a338741a4379 595 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 593 3.6E-106 T 22-04-2016 IPR010281 Protein of unknown function DUF885 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 Gene3D G3DSA:3.40.1370.10 54 201 1.2E-56 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-73 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 7 201 33.328 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 PANTHER PTHR10746 6 200 1.9E-87 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 SUPERFAMILY SSF52166 10 200 4.97E-71 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SAMA_RS01130 9b1142008250421e1287f5fc8899395f 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.2E-62 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 PANTHER PTHR23426 7 111 1.7E-39 T 22-04-2016 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 PRINTS PR00355 Adrenodoxin signature 60 74 8.1E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 PRINTS PR00355 Adrenodoxin signature 83 91 8.1E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 PRINTS PR00355 Adrenodoxin signature 42 52 8.1E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 SUPERFAMILY SSF54292 4 105 1.71E-33 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.5E-56 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 Gene3D G3DSA:3.10.20.30 5 108 1.0E-34 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS06795 4d8548bef1ccd0ef1363851b7dfea74f 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 7.6E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 Gene3D G3DSA:1.25.40.10 44 170 3.6E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 SMART SM00671 64 99 0.034 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 SMART SM00671 136 171 41.0 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 SMART SM00671 100 135 4.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 SUPERFAMILY SSF81901 62 194 7.98E-18 T 22-04-2016 SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 Pfam PF08238 Sel1 repeat 101 135 1.5E-4 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 Pfam PF08238 Sel1 repeat 67 99 6.3 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 Pfam PF08238 Sel1 repeat 145 163 0.4 T 22-04-2016 IPR006597 Sel1-like repeat SAMA_RS16010 8c586df19eab941bc3ad61a641d54ac6 204 PANTHER PTHR11102 67 167 2.6E-13 T 22-04-2016 SAMA_RS17570 294abb5e1e8640028b5860a9fdc91a8f 295 Pfam PF11219 Protein of unknown function (DUF3014) 136 291 5.0E-60 T 22-04-2016 IPR021382 Protein of unknown function DUF3014 SAMA_RS18550 760a2f3dc5059a58cc712cd8e22a5e6b 132 SUPERFAMILY SSF54637 4 129 2.55E-32 T 22-04-2016 IPR029069 HotDog domain SAMA_RS18550 760a2f3dc5059a58cc712cd8e22a5e6b 132 Pfam PF13279 Thioesterase-like superfamily 11 125 1.2E-9 T 22-04-2016 SAMA_RS18550 760a2f3dc5059a58cc712cd8e22a5e6b 132 PANTHER PTHR31793:SF1 4 126 8.3E-28 T 22-04-2016 SAMA_RS18550 760a2f3dc5059a58cc712cd8e22a5e6b 132 PANTHER PTHR31793 4 126 8.3E-28 T 22-04-2016 SAMA_RS18550 760a2f3dc5059a58cc712cd8e22a5e6b 132 Gene3D G3DSA:3.10.129.10 3 129 9.2E-33 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 Pfam PF13538 UvrD-like helicase C-terminal domain 512 558 1.7E-9 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 Gene3D G3DSA:3.40.50.300 170 371 1.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 Gene3D G3DSA:3.40.50.300 437 558 7.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 SUPERFAMILY SSF52540 169 237 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 SUPERFAMILY SSF52540 422 550 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 SUPERFAMILY SSF52540 277 387 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17225 d42fe404583d90bb26e0e4c53f271740 662 Pfam PF00580 UvrD/REP helicase N-terminal domain 274 350 1.5E-4 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 PANTHER PTHR11819:SF148 4 479 1.6E-178 T 22-04-2016 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 480 5.7E-202 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 Pfam PF00474 Sodium:solute symporter family 35 427 1.5E-103 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 427 9.2E-94 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 PANTHER PTHR11819 4 479 1.6E-178 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SAMA_RS11370 ec40e0d6bc659df19cc225d5e593b272 482 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SAMA_RS02165 75a52dc628a65b2b30504a2c6b836a4f 340 Pfam PF14321 Domain of unknown function (DUF4382) 31 189 3.6E-24 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 SAMA_RS06835 c81b5adbe4ffd6271232bab5dda029b8 107 PANTHER PTHR35813 1 105 5.4E-37 T 22-04-2016 SAMA_RS06835 c81b5adbe4ffd6271232bab5dda029b8 107 PANTHER PTHR35813:SF1 1 105 5.4E-37 T 22-04-2016 SAMA_RS06835 c81b5adbe4ffd6271232bab5dda029b8 107 PIRSF PIRSF016789 1 107 3.0E-37 T 22-04-2016 IPR007401 Protein of unknown function DUF454 SAMA_RS06835 c81b5adbe4ffd6271232bab5dda029b8 107 Pfam PF04304 Protein of unknown function (DUF454) 1 101 2.8E-34 T 22-04-2016 IPR007401 Protein of unknown function DUF454 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 Gene3D G3DSA:3.40.50.1400 3 202 6.4E-72 T 22-04-2016 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 TIGRFAM TIGR00109 hemH: ferrochelatase 3 320 7.2E-100 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 Gene3D G3DSA:3.40.50.1400 203 320 1.5E-35 T 22-04-2016 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 SUPERFAMILY SSF53800 2 325 3.92E-111 T 22-04-2016 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 Hamap MF_00323 Ferrochelatase [hemH]. 1 321 36.447 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 Pfam PF00762 Ferrochelatase 3 320 4.7E-115 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 ProSitePatterns PS00534 Ferrochelatase signature. 190 210 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SAMA_RS06875 c630bb598544a4f8c10bcf8c25587c40 327 PANTHER PTHR11108 3 319 1.7E-127 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SAMA_RS18910 3a594f59080a2f93f616943d25ae91b6 65 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 3.4E-22 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane SAMA_RS12060 19c207c6bbefbf3e58bd5cbb40ed684b 454 PANTHER PTHR30288:SF0 1 451 4.7E-83 T 22-04-2016 SAMA_RS12060 19c207c6bbefbf3e58bd5cbb40ed684b 454 Pfam PF07196 Flagellin hook IN motif 126 179 3.4E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SAMA_RS12060 19c207c6bbefbf3e58bd5cbb40ed684b 454 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 1.5E-19 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SAMA_RS12060 19c207c6bbefbf3e58bd5cbb40ed684b 454 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 436 1.1E-57 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SAMA_RS12060 19c207c6bbefbf3e58bd5cbb40ed684b 454 PANTHER PTHR30288 1 451 4.7E-83 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731:SF75 37 115 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731:SF75 316 680 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731:SF75 200 214 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731 37 115 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731 316 680 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 PANTHER PTHR11731 200 214 2.1E-71 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 Pfam PF07676 WD40-like Beta Propeller Repeat 79 104 1.3E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 SUPERFAMILY SSF53474 422 674 1.56E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 Gene3D G3DSA:2.120.10.30 39 366 2.2E-32 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 Gene3D G3DSA:3.40.50.1820 367 674 4.3E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 SUPERFAMILY SSF82171 34 413 2.88E-37 T 22-04-2016 SAMA_RS17335 df56e71818a8b9feb5f44aa34031bac9 680 Pfam PF00326 Prolyl oligopeptidase family 477 674 7.9E-43 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 PANTHER PTHR38782:SF1 1 312 5.2E-107 T 22-04-2016 SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 Gene3D G3DSA:2.50.20.10 121 180 4.6E-5 T 22-04-2016 SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 Pfam PF17188 MucB/RseB C-terminal domain 212 306 1.9E-23 T 22-04-2016 IPR033436 MucB/RseB, C-terminal SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 PIRSF PIRSF005427 1 312 9.5E-85 T 22-04-2016 IPR005588 MucB/RseB SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 PANTHER PTHR38782 1 312 5.2E-107 T 22-04-2016 SAMA_RS04580 4b6aabd80c4abcc8c5655e1d0e4fa8ba 312 Pfam PF03888 MucB/RseB N-terminal domain 21 204 7.1E-53 T 22-04-2016 IPR033434 MucB/RseB, N-terminal SAMA_RS12065 34d2f526b1c97e27c7409b705ae70626 135 PANTHER PTHR37166:SF1 53 135 2.5E-24 T 22-04-2016 SAMA_RS12065 34d2f526b1c97e27c7409b705ae70626 135 Pfam PF03646 FlaG protein 44 132 1.4E-24 T 22-04-2016 IPR005186 FlaG protein SAMA_RS12065 34d2f526b1c97e27c7409b705ae70626 135 Gene3D G3DSA:3.30.160.170 46 131 2.5E-26 T 22-04-2016 IPR005186 FlaG protein SAMA_RS12065 34d2f526b1c97e27c7409b705ae70626 135 SUPERFAMILY SSF160214 47 135 8.37E-26 T 22-04-2016 IPR005186 FlaG protein SAMA_RS12065 34d2f526b1c97e27c7409b705ae70626 135 PANTHER PTHR37166 53 135 2.5E-24 T 22-04-2016 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.662 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 Gene3D G3DSA:3.40.50.790 69 159 1.5E-40 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 SUPERFAMILY SSF56808 6 226 7.46E-83 T 22-04-2016 IPR023674 Ribosomal protein L1-like SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 Gene3D G3DSA:3.30.190.20 17 68 6.1E-48 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 Gene3D G3DSA:3.30.190.20 161 226 6.1E-48 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 PANTHER PTHR23105:SF5 21 229 5.0E-83 T 22-04-2016 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 PIRSF PIRSF002155 1 227 5.5E-79 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.7E-107 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 PANTHER PTHR23105 21 229 5.0E-83 T 22-04-2016 SAMA_RS01075 8803808f38e56f344d92e4614d7e8908 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.8E-53 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SAMA_RS06490 d54597a1bae9a3bd2acb577b5375ee94 77 Pfam PF06667 Phage shock protein B 2 72 3.0E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 SAMA_RS06490 d54597a1bae9a3bd2acb577b5375ee94 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 2 73 8.4E-32 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 2.9E-9 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 2.9E-9 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-9 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 Gene3D G3DSA:3.50.50.60 183 343 2.4E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 Gene3D G3DSA:3.50.50.60 4 182 1.7E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 1.2E-8 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.2E-8 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-8 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PANTHER PTHR22912 5 187 3.6E-24 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 PANTHER PTHR22912 203 343 3.6E-24 T 22-04-2016 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 333 4.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04885 cdd2f44462142f345986d96d510a7342 429 SUPERFAMILY SSF51905 3 343 2.16E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS03935 c2b66d40f45765eff5498da268b9f915 87 Pfam PF11212 Protein of unknown function (DUF2999) 1 81 2.3E-43 T 22-04-2016 IPR021376 Protein of unknown function DUF2999 SAMA_RS18220 0bd2e3bb79a5f7d78fb6b690480b6d4f 250 Gene3D G3DSA:3.40.50.2020 91 240 5.1E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS18220 0bd2e3bb79a5f7d78fb6b690480b6d4f 250 SUPERFAMILY SSF53271 79 238 1.7E-23 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS18220 0bd2e3bb79a5f7d78fb6b690480b6d4f 250 PANTHER PTHR11907:SF9 22 243 2.6E-46 T 22-04-2016 SAMA_RS18220 0bd2e3bb79a5f7d78fb6b690480b6d4f 250 PANTHER PTHR11907 22 243 2.6E-46 T 22-04-2016 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 Gene3D G3DSA:1.50.10.10 364 823 5.5E-134 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 Pfam PF09137 Glucodextranase, domain N 57 349 3.7E-78 T 22-04-2016 IPR015220 Glucodextranase N KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 Pfam PF00723 Glycosyl hydrolases family 15 372 806 4.2E-41 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 Gene3D G3DSA:2.70.98.10 54 349 9.2E-82 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 SUPERFAMILY SSF74650 55 352 8.79E-83 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SAMA_RS08650 93489005729627de0460455893d0b3d1 830 SUPERFAMILY SSF48208 361 820 2.8E-78 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 SUPERFAMILY SSF56954 158 500 2.75E-70 T 22-04-2016 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 SUPERFAMILY SSF56954 54 127 2.75E-70 T 22-04-2016 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 PANTHER PTHR30026:SF5 20 513 8.7E-194 T 22-04-2016 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 Gene3D G3DSA:1.20.1600.10 69 499 2.6E-54 T 22-04-2016 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 Pfam PF02321 Outer membrane efflux protein 76 294 1.5E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 Pfam PF02321 Outer membrane efflux protein 315 497 1.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS02560 f7f2e549603e34af3627789ba42e4438 517 PANTHER PTHR30026 20 513 8.7E-194 T 22-04-2016 SAMA_RS17665 de9cac9b853e5b75ec03cd4d957cdfd2 246 Gene3D G3DSA:1.25.10.10 26 127 6.3E-4 T 22-04-2016 IPR011989 Armadillo-like helical SAMA_RS17665 de9cac9b853e5b75ec03cd4d957cdfd2 246 Gene3D G3DSA:1.25.10.10 181 244 6.3E-4 T 22-04-2016 IPR011989 Armadillo-like helical SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 Pfam PF04963 Sigma-54 factor, core binding domain 132 320 8.2E-63 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PANTHER PTHR32248:SF4 1 493 4.9E-179 T 22-04-2016 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 381 400 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PANTHER PTHR32248 1 493 4.9E-179 T 22-04-2016 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 472 479 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.4E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PRINTS PR00045 Sigma-54 factor signature 393 405 7.86E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PRINTS PR00045 Sigma-54 factor signature 203 220 7.86E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PRINTS PR00045 Sigma-54 factor signature 409 420 7.86E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PRINTS PR00045 Sigma-54 factor signature 467 485 7.86E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 491 9.0E-159 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 Pfam PF04552 Sigma-54, DNA binding domain 334 491 1.6E-70 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SAMA_RS16110 fd84ec6fe1980deb1a27dc07c45b5040 493 PIRSF PIRSF000774 1 493 8.7E-158 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SAMA_RS11810 44e7afaa1c3a6fbddb0e30c3f89c4075 400 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 316 389 1.2E-7 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SAMA_RS11810 44e7afaa1c3a6fbddb0e30c3f89c4075 400 Pfam PF01943 Polysaccharide biosynthesis protein 4 259 5.6E-8 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SAMA_RS08120 24d8bc53440999a9eb12fe21867ab61a 342 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 338 45.182 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SAMA_RS08120 24d8bc53440999a9eb12fe21867ab61a 342 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 332 5.0E-94 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SAMA_RS08120 24d8bc53440999a9eb12fe21867ab61a 342 PANTHER PTHR38772 2 342 8.2E-169 T 22-04-2016 SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 SUPERFAMILY SSF50249 2 68 2.34E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 101 436 1.3E-23 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 Gene3D G3DSA:2.40.50.140 7 89 7.1E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 SUPERFAMILY SSF53335 77 440 9.09E-82 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 Pfam PF01938 TRAM domain 18 68 1.6E-10 T 22-04-2016 IPR002792 TRAM domain SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 PANTHER PTHR11061 17 443 6.4E-122 T 22-04-2016 SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 26 434 7.8E-120 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 20 442 62.546 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 Gene3D G3DSA:3.40.50.150 259 440 6.5E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05380 dd0ebce098749f4bdcaec9a6af690b20 443 PANTHER PTHR11061:SF30 17 443 6.4E-122 T 22-04-2016 SAMA_RS05355 a214182d45899372ffcaaf665214f48f 315 Pfam PF03547 Membrane transport protein 6 135 1.7E-8 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SAMA_RS05355 a214182d45899372ffcaaf665214f48f 315 Pfam PF03547 Membrane transport protein 162 306 1.1E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SAMA_RS05355 a214182d45899372ffcaaf665214f48f 315 PANTHER PTHR36838 1 313 2.0E-30 T 22-04-2016 SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 PIRSF PIRSF000524 9 376 1.4E-113 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 SUPERFAMILY SSF53383 13 375 3.89E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 Gene3D G3DSA:3.90.1150.10 272 376 5.9E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 Pfam PF00266 Aminotransferase class-V 22 341 5.1E-34 T 22-04-2016 IPR000192 Aminotransferase class V domain SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 213 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 Gene3D G3DSA:3.40.640.10 27 271 8.0E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS17075 69cd7a5002ad3b124dedc845a2518905 376 PANTHER PTHR21152 7 376 1.6E-129 T 22-04-2016 SAMA_RS06190 a5ffb1d3b9b124b948c675ff4cf11b1d 409 PANTHER PTHR13369:SF1 10 261 1.5E-84 T 22-04-2016 SAMA_RS06190 a5ffb1d3b9b124b948c675ff4cf11b1d 409 PANTHER PTHR13369:SF1 339 408 1.5E-84 T 22-04-2016 SAMA_RS06190 a5ffb1d3b9b124b948c675ff4cf11b1d 409 Pfam PF13679 Methyltransferase domain 116 241 5.6E-18 T 22-04-2016 IPR025714 Methyltransferase domain SAMA_RS06190 a5ffb1d3b9b124b948c675ff4cf11b1d 409 PANTHER PTHR13369 10 261 1.5E-84 T 22-04-2016 SAMA_RS06190 a5ffb1d3b9b124b948c675ff4cf11b1d 409 PANTHER PTHR13369 339 408 1.5E-84 T 22-04-2016 SAMA_RS16180 fda9f84b0a8f3cba26ebedd02b67a5a9 255 SMART SM00849 11 210 4.1E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS16180 fda9f84b0a8f3cba26ebedd02b67a5a9 255 PANTHER PTHR11935 41 211 3.9E-12 T 22-04-2016 SAMA_RS16180 fda9f84b0a8f3cba26ebedd02b67a5a9 255 Pfam PF00753 Metallo-beta-lactamase superfamily 11 199 1.5E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS16180 fda9f84b0a8f3cba26ebedd02b67a5a9 255 SUPERFAMILY SSF56281 4 236 1.97E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS16180 fda9f84b0a8f3cba26ebedd02b67a5a9 255 Gene3D G3DSA:3.60.15.10 7 223 4.1E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase SAMA_RS12850 d35e3595318f86f734534d856112e9b3 122 Pfam PF03061 Thioesterase superfamily 18 90 4.2E-14 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS12850 d35e3595318f86f734534d856112e9b3 122 PANTHER PTHR11049 1 114 1.3E-48 T 22-04-2016 SAMA_RS12850 d35e3595318f86f734534d856112e9b3 122 SUPERFAMILY SSF54637 4 115 1.65E-22 T 22-04-2016 IPR029069 HotDog domain SAMA_RS12850 d35e3595318f86f734534d856112e9b3 122 PANTHER PTHR11049:SF13 1 114 1.3E-48 T 22-04-2016 SAMA_RS12850 d35e3595318f86f734534d856112e9b3 122 Gene3D G3DSA:3.10.129.10 4 115 5.5E-21 T 22-04-2016 IPR029069 HotDog domain SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 PIRSF PIRSF029256 1 154 1.3E-65 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.347 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 Gene3D G3DSA:3.40.1280.10 1 153 1.8E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 SUPERFAMILY SSF75217 1 152 3.01E-45 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 3.1E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 PANTHER PTHR12029:SF31 1 150 2.2E-74 T 22-04-2016 SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 PANTHER PTHR12029 1 150 2.2E-74 T 22-04-2016 SAMA_RS17895 b2799956e16b8daa5bd355091bef4b17 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 7.8E-59 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SAMA_RS04505 69375f7f24766c7f9b34709a8f113a03 358 Gene3D G3DSA:3.30.70.1230 169 355 5.2E-20 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SAMA_RS04505 69375f7f24766c7f9b34709a8f113a03 358 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 169 348 1.3E-8 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SAMA_RS04505 69375f7f24766c7f9b34709a8f113a03 358 SUPERFAMILY SSF55073 165 354 5.18E-33 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS18815 bc017908e3d39c32a7d2d2da46c4e5ed 133 PANTHER PTHR35091 16 133 1.3E-33 T 22-04-2016 SAMA_RS18815 bc017908e3d39c32a7d2d2da46c4e5ed 133 Pfam PF03748 Flagellar basal body-associated protein FliL 31 131 1.6E-14 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 PANTHER PTHR10302 4 172 1.0E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 PANTHER PTHR10302 226 234 1.0E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 SUPERFAMILY SSF50249 4 167 1.3E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 Pfam PF00436 Single-strand binding protein family 6 109 2.4E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 156 6.3E-58 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 Gene3D G3DSA:2.40.50.140 4 118 1.2E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SAMA_RS02760 44fb5f24de58e0c3bed4fd4e31799daf 234 Hamap MF_00984 Single-stranded DNA-binding protein. 6 116 39.622 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SAMA_RS17280 8714fa104f241db179bb2b3de117914a 117 PANTHER PTHR11803 10 117 2.2E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SAMA_RS17280 8714fa104f241db179bb2b3de117914a 117 SUPERFAMILY SSF55298 6 115 9.11E-33 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SAMA_RS17280 8714fa104f241db179bb2b3de117914a 117 Gene3D G3DSA:3.30.1330.40 10 116 4.9E-27 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SAMA_RS17280 8714fa104f241db179bb2b3de117914a 117 Pfam PF01042 Endoribonuclease L-PSP 9 114 7.9E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SAMA_RS17280 8714fa104f241db179bb2b3de117914a 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 109 - T 22-04-2016 IPR019897 RidA, conserved site SAMA_RS06555 bb701589768d7612b04353333a604335 402 PANTHER PTHR34501 2 402 1.2E-121 T 22-04-2016 SAMA_RS06555 bb701589768d7612b04353333a604335 402 PANTHER PTHR34501:SF2 2 402 1.2E-121 T 22-04-2016 SAMA_RS06555 bb701589768d7612b04353333a604335 402 SUPERFAMILY SSF56935 22 400 1.43E-51 T 22-04-2016 SAMA_RS06555 bb701589768d7612b04353333a604335 402 Gene3D G3DSA:2.40.160.10 23 400 4.0E-57 T 22-04-2016 IPR023614 Porin domain SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 PANTHER PTHR10859:SF84 1 289 1.7E-94 T 22-04-2016 SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 PANTHER PTHR10859 1 289 1.7E-94 T 22-04-2016 SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 Pfam PF00535 Glycosyl transferase family 2 5 125 3.9E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 Gene3D G3DSA:3.90.550.10 1 196 1.6E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 340 549 7.3E-13 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SAMA_RS17610 daa9e72d8975b0f6f81ba0649a623b56 552 SUPERFAMILY SSF53448 2 230 3.43E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 SUPERFAMILY SSF46565 1 73 9.81E-17 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 SUPERFAMILY SSF47144 77 174 2.09E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 Gene3D G3DSA:1.10.287.110 1 72 6.3E-24 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 173 25.499 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 Gene3D G3DSA:1.20.1280.20 81 174 9.0E-27 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 PANTHER PTHR14021:SF15 1 167 2.1E-50 T 22-04-2016 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 171 8.7E-37 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 PANTHER PTHR14021 1 167 2.1E-50 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 165 9.3E-18 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SAMA_RS06785 f6b6347859ddce460ee73689e79584ae 174 SMART SM00271 1 66 9.9E-6 T 22-04-2016 IPR001623 DnaJ domain SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 172 18.229 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 PANTHER PTHR35561 1 174 1.9E-34 T 22-04-2016 SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 SUPERFAMILY SSF55144 6 173 4.01E-38 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 Gene3D G3DSA:3.90.1140.10 5 173 3.2E-37 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 172 1.4E-26 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 PANTHER PTHR35561:SF1 1 174 1.9E-34 T 22-04-2016 SAMA_RS15520 b4a3a7f255457c52d3005c93831cfcbe 175 Pfam PF02834 LigT like Phosphoesterase 16 82 2.9E-9 T 22-04-2016 IPR014051 Phosphoesterase, HXTX SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 Gene3D G3DSA:1.10.1200.10 3 76 5.0E-36 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 PANTHER PTHR20863 4 76 2.1E-31 T 22-04-2016 SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 5.0E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 SUPERFAMILY SSF47336 2 76 3.53E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.5E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SAMA_RS10335 c40e00996eb39853bef786aac071cc03 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.432 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 SUPERFAMILY SSF51445 2 301 1.26E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 PANTHER PTHR30480:SF7 3 290 2.0E-108 T 22-04-2016 SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 5 294 2.2E-72 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 Gene3D G3DSA:3.20.20.300 3 292 1.5E-84 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 339 47.05 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 SAMA_RS06925 b0c8914c75158385c6fade133a74e69f 341 PANTHER PTHR30480 3 290 2.0E-108 T 22-04-2016 SAMA_RS02935 ea1850cede094df269c53bb6bea9b3fa 223 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 15 214 1.9E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS02935 ea1850cede094df269c53bb6bea9b3fa 223 SUPERFAMILY SSF53850 5 214 8.15E-19 T 22-04-2016 SAMA_RS18335 d98151951825317d02e45cc801413326 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 83 1.1E-22 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 SAMA_RS18335 d98151951825317d02e45cc801413326 83 Gene3D G3DSA:3.10.20.30 1 83 5.1E-26 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS18335 d98151951825317d02e45cc801413326 83 Pfam PF02597 ThiS family 4 83 5.3E-20 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SAMA_RS18335 d98151951825317d02e45cc801413326 83 SUPERFAMILY SSF54285 1 83 6.35E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SAMA_RS18335 d98151951825317d02e45cc801413326 83 PANTHER PTHR33359 1 83 1.8E-26 T 22-04-2016 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 SMART SM00847 399 521 3.2E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Pfam PF08482 ATP-dependent helicase C-terminal 689 821 1.7E-50 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Pfam PF00270 DEAD/DEAH box helicase 20 162 1.3E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 834 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 PIRSF PIRSF005496 1 835 2.1E-292 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 SMART SM00490 240 339 7.9E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 120 129 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Pfam PF00271 Helicase conserved C-terminal domain 223 338 3.0E-14 T 22-04-2016 IPR001650 Helicase, C-terminal SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 PANTHER PTHR18934:SF118 6 465 2.0E-131 T 22-04-2016 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Gene3D G3DSA:3.40.50.300 6 162 2.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 SUPERFAMILY SSF52540 19 350 4.91E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Gene3D G3DSA:3.40.50.300 222 354 8.8E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 SMART SM00487 7 188 3.8E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 Pfam PF04408 Helicase associated domain (HA2) 400 463 2.6E-8 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SAMA_RS15510 2b0c12a17fa9885e4514febdae973efc 838 PANTHER PTHR18934 6 465 2.0E-131 T 22-04-2016 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Pfam PF00270 DEAD/DEAH box helicase 30 132 8.5E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 18 112 9.64E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 189 246 9.64E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 584 621 9.64E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Gene3D G3DSA:3.40.50.300 475 620 5.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Pfam PF13307 Helicase C-terminal domain 479 638 2.5E-36 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 PANTHER PTHR11472:SF37 5 415 1.1E-180 T 22-04-2016 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 PANTHER PTHR11472:SF37 431 643 1.1E-180 T 22-04-2016 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Gene3D G3DSA:3.40.50.300 392 401 3.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Gene3D G3DSA:3.40.50.300 23 121 3.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 Gene3D G3DSA:3.40.50.300 192 260 3.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 PANTHER PTHR11472 431 643 1.1E-180 T 22-04-2016 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 595 615 5.88E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 374 421 5.88E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 186 232 5.88E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SUPERFAMILY SSF52540 448 564 5.88E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SMART SM00487 20 278 0.0037 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 PANTHER PTHR11472 5 415 1.1E-180 T 22-04-2016 SAMA_RS10145 32e689b001d32cbd5a7895cc0c59eddf 656 SMART SM00491 496 625 7.1E-44 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 Gene3D G3DSA:3.40.810.20 184 422 2.9E-44 T 22-04-2016 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 SUPERFAMILY SSF100950 3 218 1.14E-40 T 22-04-2016 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 PANTHER PTHR21432 6 427 1.9E-189 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 175 8.2E-18 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 267 419 2.6E-64 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 SUPERFAMILY SSF100950 184 422 2.79E-66 T 22-04-2016 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 PANTHER PTHR21432:SF18 6 427 1.9E-189 T 22-04-2016 SAMA_RS15135 1f79c7ad5a50ffced20f6b4d1b6c6890 428 Gene3D G3DSA:3.40.1080.10 6 177 1.8E-56 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 Gene3D G3DSA:2.40.50.100 63 96 7.8E-11 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 Gene3D G3DSA:2.40.50.100 221 245 7.8E-11 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 PANTHER PTHR30386 1 377 1.4E-101 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 303 3.8E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 Pfam PF00529 HlyD membrane-fusion protein of T1SS 80 369 2.0E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 PANTHER PTHR30386:SF7 1 377 1.4E-101 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 SUPERFAMILY SSF111369 61 138 3.66E-10 T 22-04-2016 SAMA_RS14660 f218a3f255e608bc16612c5804827c24 381 SUPERFAMILY SSF111369 175 276 7.32E-8 T 22-04-2016 SAMA_RS03570 1453497e6283c484d311f3295991552c 111 Gene3D G3DSA:2.60.120.10 14 103 9.4E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS03570 1453497e6283c484d311f3295991552c 111 Pfam PF07883 Cupin domain 42 102 2.4E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SAMA_RS03570 1453497e6283c484d311f3295991552c 111 SUPERFAMILY SSF51182 3 105 5.35E-19 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS04555 834c8b0d58aff585ffbd35e11c475e6d 79 Pfam PF03937 Flavinator of succinate dehydrogenase 4 70 9.1E-27 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SAMA_RS04555 834c8b0d58aff585ffbd35e11c475e6d 79 PANTHER PTHR39585 1 79 4.1E-33 T 22-04-2016 SAMA_RS04555 834c8b0d58aff585ffbd35e11c475e6d 79 PANTHER PTHR39585:SF1 1 79 4.1E-33 T 22-04-2016 SAMA_RS04555 834c8b0d58aff585ffbd35e11c475e6d 79 Gene3D G3DSA:1.10.150.250 3 75 1.9E-29 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SAMA_RS04555 834c8b0d58aff585ffbd35e11c475e6d 79 SUPERFAMILY SSF109910 4 74 4.71E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 PANTHER PTHR11647 9 97 4.8E-18 T 22-04-2016 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 PANTHER PTHR11647:SF71 9 97 4.8E-18 T 22-04-2016 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 SUPERFAMILY SSF51556 118 366 1.59E-9 T 22-04-2016 IPR032466 Metal-dependent hydrolase SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 Gene3D G3DSA:2.30.40.10 311 403 5.1E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 Gene3D G3DSA:2.30.40.10 24 140 1.4E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 Pfam PF01979 Amidohydrolase family 340 389 8.4E-7 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 SUPERFAMILY SSF51338 25 82 8.22E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06105 369ef635d60c27988e7e62078bf75dee 419 SUPERFAMILY SSF51338 368 403 8.22E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 Gene3D G3DSA:3.40.1190.20 96 298 4.1E-39 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 Gene3D G3DSA:3.40.1190.20 337 434 4.1E-39 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584:SF202 17 293 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584:SF202 332 376 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584:SF202 393 434 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 Pfam PF00294 pfkB family carbohydrate kinase 134 293 1.8E-5 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 Gene3D G3DSA:3.30.1110.10 45 95 8.5E-6 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584 17 293 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584 332 376 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 PANTHER PTHR10584 393 434 1.9E-228 T 22-04-2016 SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 SUPERFAMILY SSF53613 36 305 1.4E-40 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS06880 a5dc38b783d2bd2933976f6fb9966ac0 434 SUPERFAMILY SSF53613 338 417 1.4E-40 T 22-04-2016 IPR029056 Ribokinase-like SAMA_RS11155 ddc9b292d995a1a01beed3478297f548 177 PANTHER PTHR11080:SF13 1 155 5.0E-33 T 22-04-2016 SAMA_RS11155 ddc9b292d995a1a01beed3478297f548 177 PANTHER PTHR11080 1 155 5.0E-33 T 22-04-2016 SAMA_RS11155 ddc9b292d995a1a01beed3478297f548 177 Gene3D G3DSA:3.40.50.850 2 156 5.9E-40 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS11155 ddc9b292d995a1a01beed3478297f548 177 SUPERFAMILY SSF52499 3 151 2.49E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS11155 ddc9b292d995a1a01beed3478297f548 177 Pfam PF00857 Isochorismatase family 4 147 1.2E-32 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SAMA_RS11405 921266dd5acb266f13f7a87b01bdd73d 129 SMART SM00450 29 124 6.4E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11405 921266dd5acb266f13f7a87b01bdd73d 129 PANTHER PTHR12231 39 122 1.5E-12 T 22-04-2016 SAMA_RS11405 921266dd5acb266f13f7a87b01bdd73d 129 Gene3D G3DSA:3.40.250.10 26 122 1.9E-29 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11405 921266dd5acb266f13f7a87b01bdd73d 129 Pfam PF00581 Rhodanese-like domain 33 112 1.1E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS11405 921266dd5acb266f13f7a87b01bdd73d 129 SUPERFAMILY SSF52821 14 116 1.83E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 Gene3D G3DSA:3.30.50.10 2 55 3.4E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 19.418 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 PANTHER PTHR36150 1 67 8.7E-22 T 22-04-2016 SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 SUPERFAMILY SSF57716 2 58 2.85E-22 T 22-04-2016 SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 Pfam PF03884 Domain of unknown function (DUF329) 5 53 6.0E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 SAMA_RS01985 82b442954d20183a23d2d41b7f8df7e7 71 PANTHER PTHR36150:SF1 1 67 8.7E-22 T 22-04-2016 SAMA_RS15955 6329b9b7bd2217fce5056e44d271c200 154 PANTHER PTHR39452:SF1 1 154 1.1E-69 T 22-04-2016 SAMA_RS15955 6329b9b7bd2217fce5056e44d271c200 154 PANTHER PTHR39452 1 154 1.1E-69 T 22-04-2016 SAMA_RS15955 6329b9b7bd2217fce5056e44d271c200 154 Gene3D G3DSA:3.40.1550.10 1 153 1.2E-42 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS15955 6329b9b7bd2217fce5056e44d271c200 154 SUPERFAMILY SSF103039 1 153 1.11E-38 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS15955 6329b9b7bd2217fce5056e44d271c200 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 5.4E-23 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 SUPERFAMILY SSF53098 7 470 2.1E-130 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 SMART SM00479 8 201 0.0074 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 PIRSF PIRSF000977 1 470 1.1E-202 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 Gene3D G3DSA:3.30.420.10 3 199 8.2E-81 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 Pfam PF00929 Exonuclease 11 191 2.9E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 PANTHER PTHR11046:SF2 1 470 4.2E-256 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 PANTHER PTHR11046 1 470 4.2E-256 T 22-04-2016 SAMA_RS10305 74ee5aad9c9a290ac17f4d914a27b849 470 Pfam PF08411 Exonuclease C-terminal 210 468 1.5E-101 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 SAMA_RS00260 5f5d0cbba8a387b46cdbeee453ec28c1 85 Pfam PF07369 Protein of unknown function (DUF1488) 6 85 6.6E-17 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 SAMA_RS00260 5f5d0cbba8a387b46cdbeee453ec28c1 85 Gene3D G3DSA:3.30.160.140 1 85 3.0E-24 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 SAMA_RS00260 5f5d0cbba8a387b46cdbeee453ec28c1 85 SUPERFAMILY SSF160272 1 85 2.35E-20 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 SUPERFAMILY SSF47648 6 71 3.92E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 SUPERFAMILY SSF52418 77 334 2.09E-92 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 Gene3D G3DSA:1.20.970.10 7 72 3.4E-24 T 22-04-2016 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 4.0E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 PANTHER PTHR11922 1 343 4.4E-112 T 22-04-2016 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 334 6.0E-125 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 Pfam PF00591 Glycosyl transferase family, a/b domain 79 329 1.5E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 PANTHER PTHR11922:SF5 1 343 4.4E-112 T 22-04-2016 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 338 39.193 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SAMA_RS11135 3c7125ef4fe84b95d5ab48a45f831e2c 344 Gene3D G3DSA:3.40.1030.10 77 341 1.6E-104 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SAMA_RS15255 1c4157900d866dfad230de12955d4c96 436 Pfam PF00144 Beta-lactamase 39 327 1.6E-44 T 22-04-2016 IPR001466 Beta-lactamase-related SAMA_RS15255 1c4157900d866dfad230de12955d4c96 436 SUPERFAMILY SSF56601 17 334 4.05E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS15255 1c4157900d866dfad230de12955d4c96 436 Gene3D G3DSA:3.40.710.10 33 338 1.2E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS15255 1c4157900d866dfad230de12955d4c96 436 PANTHER PTHR22935 13 325 8.8E-48 T 22-04-2016 SAMA_RS18295 d897b79a2a2732a129dccde42ba4c83b 196 Gene3D G3DSA:3.40.630.30 8 162 1.0E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS18295 d897b79a2a2732a129dccde42ba4c83b 196 Pfam PF13302 Acetyltransferase (GNAT) domain 23 159 2.2E-26 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS18295 d897b79a2a2732a129dccde42ba4c83b 196 PANTHER PTHR13256:SF19 1 159 1.4E-35 T 22-04-2016 SAMA_RS18295 d897b79a2a2732a129dccde42ba4c83b 196 PANTHER PTHR13256 1 159 1.4E-35 T 22-04-2016 SAMA_RS18295 d897b79a2a2732a129dccde42ba4c83b 196 SUPERFAMILY SSF55729 20 160 3.61E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14550 a96371c54d41f25fc6d479cfb7314a58 295 Pfam PF04018 Domain of unknown function (DUF368) 1 245 2.5E-92 T 22-04-2016 IPR007163 Protein of unknown function DUF368 SAMA_RS14550 a96371c54d41f25fc6d479cfb7314a58 295 PANTHER PTHR37308 1 294 1.2E-78 T 22-04-2016 SAMA_RS08080 92e98ba7f9fb8124fb48361240907afb 227 PANTHER PTHR30086:SF13 2 226 2.4E-64 T 22-04-2016 SAMA_RS08080 92e98ba7f9fb8124fb48361240907afb 227 Pfam PF01810 LysE type translocator 16 219 5.7E-27 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08080 92e98ba7f9fb8124fb48361240907afb 227 PANTHER PTHR30086 2 226 2.4E-64 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 SUPERFAMILY SSF144083 250 313 4.84E-21 T 22-04-2016 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 PANTHER PTHR21535:SF37 22 315 2.7E-121 T 22-04-2016 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 Gene3D G3DSA:1.20.58.340 239 315 1.2E-28 T 22-04-2016 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 25 315 2.7E-69 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 Pfam PF01544 CorA-like Mg2+ transporter protein 27 311 5.3E-66 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 PANTHER PTHR21535 22 315 2.7E-121 T 22-04-2016 SAMA_RS08015 f6ada217f5025d85efd2a0c0500c621a 315 SUPERFAMILY SSF143865 1 254 3.79E-31 T 22-04-2016 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Gene3D G3DSA:2.160.10.10 141 298 8.8E-36 T 22-04-2016 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Gene3D G3DSA:2.160.10.10 99 140 1.1E-12 T 22-04-2016 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 36.291 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 7.4E-114 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 PANTHER PTHR22572 69 295 3.7E-48 T 22-04-2016 SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.4E-9 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 3.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 2.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 SUPERFAMILY SSF51161 32 318 1.11E-79 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS06020 a4c75b15ddb3719bd3a2342f12f29c70 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 4.6E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 SAMA_RS11160 a2e1a844b8ccadd0d318cb2bfe1334d8 435 SUPERFAMILY SSF53474 67 249 5.09E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11160 a2e1a844b8ccadd0d318cb2bfe1334d8 435 Gene3D G3DSA:3.40.50.1820 75 128 2.0E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11160 a2e1a844b8ccadd0d318cb2bfe1334d8 435 Gene3D G3DSA:3.40.50.1820 164 257 2.0E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS11160 a2e1a844b8ccadd0d318cb2bfe1334d8 435 Pfam PF12697 Alpha/beta hydrolase family 81 266 3.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PANTHER PTHR11236:SF18 10 470 1.2E-163 T 22-04-2016 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 152 3.3E-19 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 SUPERFAMILY SSF56322 17 469 3.01E-142 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PANTHER PTHR11236 10 470 1.2E-163 T 22-04-2016 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 Gene3D G3DSA:3.60.120.10 12 469 1.9E-149 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 Pfam PF00425 chorismate binding enzyme 207 460 8.9E-95 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 115 462 1.3E-120 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PRINTS PR00095 Anthranilate synthase component I signature 322 335 1.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PRINTS PR00095 Anthranilate synthase component I signature 417 431 1.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS08805 2db92820d563bf19cccb886fd8ea84b9 471 PRINTS PR00095 Anthranilate synthase component I signature 308 321 1.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SAMA_RS12195 fcdf20f12c4b41ad192764af43586852 335 Gene3D G3DSA:3.40.630.30 134 288 6.0E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS12195 fcdf20f12c4b41ad192764af43586852 335 Pfam PF13480 Acetyltransferase (GNAT) domain 141 274 1.6E-6 T 22-04-2016 SAMA_RS12195 fcdf20f12c4b41ad192764af43586852 335 SUPERFAMILY SSF55729 145 302 5.09E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 ProSitePatterns PS01265 Tpx family signature. 106 117 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 SUPERFAMILY SSF52833 25 183 8.34E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 Gene3D G3DSA:3.40.30.10 25 188 6.1E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 PANTHER PTHR10681 19 188 7.2E-49 T 22-04-2016 SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 Pfam PF00578 AhpC/TSA family 41 166 3.3E-23 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS12865 c62a8ec44d3fea35472f47c117037fd2 191 PANTHER PTHR10681:SF81 19 188 7.2E-49 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 Gene3D G3DSA:3.40.190.10 130 186 6.2E-5 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 Gene3D G3DSA:3.40.190.10 26 108 4.3E-6 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 Gene3D G3DSA:3.40.190.10 204 241 4.3E-6 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 PANTHER PTHR35936 2 255 2.4E-61 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 SUPERFAMILY SSF53850 27 241 6.13E-26 T 22-04-2016 SAMA_RS05260 f607384155779cd4609b460087c33005 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 240 1.7E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS05260 f607384155779cd4609b460087c33005 259 PANTHER PTHR35936:SF4 2 255 2.4E-61 T 22-04-2016 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 Pfam PF00899 ThiF family 17 258 5.9E-34 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 Gene3D G3DSA:3.40.50.720 2 260 1.8E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 PANTHER PTHR10953 196 262 3.2E-122 T 22-04-2016 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 PANTHER PTHR10953:SF159 196 262 3.2E-122 T 22-04-2016 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 PANTHER PTHR10953:SF159 7 163 3.2E-122 T 22-04-2016 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 SUPERFAMILY SSF69572 5 260 3.01E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SAMA_RS02910 ceceb541c28d580dae971ae2f946d9b2 262 PANTHER PTHR10953 7 163 3.2E-122 T 22-04-2016 SAMA_RS16895 1d180cb493d8ccf08dcecc813d9bce09 195 Pfam PF04955 HupE / UreJ protein 14 192 3.0E-50 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein SAMA_RS16895 1d180cb493d8ccf08dcecc813d9bce09 195 PIRSF PIRSF016919 1 195 7.6E-42 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 SUPERFAMILY SSF53697 6 329 3.15E-65 T 22-04-2016 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 Gene3D G3DSA:3.40.50.10490 5 184 3.8E-30 T 22-04-2016 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 Pfam PF01380 SIS domain 203 284 4.4E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 Pfam PF01380 SIS domain 43 165 1.0E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 PANTHER PTHR10937 1 331 3.0E-139 T 22-04-2016 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 PANTHER PTHR10937:SF8 1 331 3.0E-139 T 22-04-2016 SAMA_RS04930 b9b242195d1df2a20af45b233de721ed 332 Gene3D G3DSA:3.40.50.10490 185 330 8.2E-30 T 22-04-2016 SAMA_RS05105 f3052cd5b4228522028a6f34118e6ec8 211 Pfam PF10144 Bacterial virulence factor haemolysin 27 163 1.2E-10 T 22-04-2016 IPR019305 Uncharacterised protein family Smp SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 Pfam PF12833 Helix-turn-helix domain 194 271 1.4E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 PANTHER PTHR11019:SF105 3 275 2.4E-48 T 22-04-2016 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 SUPERFAMILY SSF51215 27 149 8.24E-13 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 Gene3D G3DSA:1.10.10.60 171 223 4.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 SUPERFAMILY SSF46689 222 273 4.26E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 PANTHER PTHR11019 3 275 2.4E-48 T 22-04-2016 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 SUPERFAMILY SSF46689 174 220 1.97E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 Gene3D G3DSA:2.60.120.280 26 154 4.3E-9 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 Pfam PF02311 AraC-like ligand binding domain 18 145 1.0E-19 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 SMART SM00342 186 270 6.2E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SAMA_RS08085 cdfa39fe1ab192cfad9715190665ce59 275 Gene3D G3DSA:1.10.10.60 224 272 2.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 SMART SM00283 387 648 6.2E-81 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 SMART SM01358 37 290 2.5E-47 T 22-04-2016 IPR032255 Helical bimodular sensor domain SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 Gene3D G3DSA:1.10.287.950 402 619 5.5E-58 T 22-04-2016 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 647 2.3E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 PANTHER PTHR32089 355 649 4.9E-96 T 22-04-2016 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 SUPERFAMILY SSF58104 357 649 1.24E-73 T 22-04-2016 SAMA_RS13060 b56d7d42274547d7bffe3506e5e0b231 649 Pfam PF02203 Tar ligand binding domain homologue 1 97 5.7E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 55 342 3.9E-97 T 22-04-2016 IPR014301 TMAO reductase system periplasmic, TorT SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 PANTHER PTHR30146:SF60 49 341 2.7E-37 T 22-04-2016 SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 Gene3D G3DSA:3.40.50.2300 54 169 9.6E-12 T 22-04-2016 SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 54 320 1.1E-17 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 SUPERFAMILY SSF53822 53 317 2.59E-25 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 Gene3D G3DSA:3.40.50.2300 170 306 6.4E-11 T 22-04-2016 SAMA_RS05140 3ed5218604588f38d0642f8ffa441bbb 345 PANTHER PTHR30146 49 341 2.7E-37 T 22-04-2016 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 SUPERFAMILY SSF55347 130 239 6.76E-38 T 22-04-2016 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 PIRSF PIRSF000161 3 270 1.4E-89 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 267 5.5E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 268 35.178 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 PANTHER PTHR20836:SF0 1 270 5.9E-103 T 22-04-2016 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 6.2E-41 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 Gene3D G3DSA:3.40.50.720 4 166 2.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 PANTHER PTHR20836 1 270 5.9E-103 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 SUPERFAMILY SSF51735 4 129 1.02E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 SUPERFAMILY SSF51735 239 269 1.02E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS13075 7f9bd08328c172e7039dc69253b66008 270 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 1.4E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 Gene3D G3DSA:3.30.1340.10 5 89 1.3E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 PANTHER PTHR33705:SF2 1 91 9.6E-40 T 22-04-2016 SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.1E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 SUPERFAMILY SSF55594 5 90 3.79E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.5E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.5E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 PRINTS PR00107 Phosphocarrier protein signature 15 31 2.5E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 Pfam PF00381 PTS HPr component phosphorylation site 5 84 6.9E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SAMA_RS16130 49445afea23399a2c1f85798ab0af0cd 91 PANTHER PTHR33705 1 91 9.6E-40 T 22-04-2016 SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.3E-74 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.302 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 Pfam PF01765 Ribosome recycling factor 21 183 2.3E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 SUPERFAMILY SSF55194 2 185 4.97E-70 T 22-04-2016 IPR023584 Ribosome recycling factor domain SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 PANTHER PTHR20982 1 185 2.6E-80 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SAMA_RS05985 6f298ea224adc83223266d4af1091744 185 Gene3D G3DSA:1.10.132.20 67 185 5.7E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain SAMA_RS17285 79246334874a2e824605f17ba1af6e56 508 PANTHER PTHR33451:SF2 5 506 4.9E-155 T 22-04-2016 SAMA_RS17285 79246334874a2e824605f17ba1af6e56 508 Pfam PF03553 Na+/H+ antiporter family 162 465 6.0E-40 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS17285 79246334874a2e824605f17ba1af6e56 508 PANTHER PTHR33451 5 506 4.9E-155 T 22-04-2016 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 SUPERFAMILY SSF53720 20 503 3.14E-94 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 Pfam PF00171 Aldehyde dehydrogenase family 15 309 7.7E-44 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 PANTHER PTHR11699 33 515 2.3E-104 T 22-04-2016 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 Gene3D G3DSA:3.40.605.10 8 267 2.5E-51 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 PANTHER PTHR11699:SF10 33 515 2.3E-104 T 22-04-2016 SAMA_RS07950 a031747a161a9e04e56ec360db053289 515 Gene3D G3DSA:3.40.309.10 268 454 2.3E-39 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 Pfam PF00484 Carbonic anhydrase 37 187 3.7E-51 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 PANTHER PTHR11002:SF20 1 201 3.4E-120 T 22-04-2016 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 Gene3D G3DSA:3.40.1050.10 3 197 3.1E-78 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 SMART SM00947 30 192 1.8E-71 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 SUPERFAMILY SSF53056 1 197 7.98E-77 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS08580 249950d6e44e1f1fcc2080e42a974507 203 PANTHER PTHR11002 1 201 3.4E-120 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SAMA_RS10630 9f3bd5028807c08e72d9aea6f580bedc 408 PANTHER PTHR35793 2 408 2.5E-246 T 22-04-2016 SAMA_RS10630 9f3bd5028807c08e72d9aea6f580bedc 408 PANTHER PTHR35793:SF2 2 408 2.5E-246 T 22-04-2016 SAMA_RS10630 9f3bd5028807c08e72d9aea6f580bedc 408 Pfam PF07670 Nucleoside recognition 48 156 1.7E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS10630 9f3bd5028807c08e72d9aea6f580bedc 408 Pfam PF07670 Nucleoside recognition 275 378 5.7E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SAMA_RS10630 9f3bd5028807c08e72d9aea6f580bedc 408 PIRSF PIRSF036542 1 408 4.3E-193 T 22-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB SAMA_RS14040 dcc3b3920b4cc4b45570d36f47977403 355 Pfam PF12294 Protein of unknown function (DUF3626) 56 352 8.2E-137 T 22-04-2016 IPR022074 Protein of unknown function DUF3626 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 SUPERFAMILY SSF53850 92 299 1.32E-44 T 22-04-2016 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 8.5E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 Gene3D G3DSA:3.40.190.10 179 259 9.4E-8 T 22-04-2016 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 Gene3D G3DSA:3.40.190.10 93 178 5.2E-25 T 22-04-2016 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 PANTHER PTHR30537 1 312 9.3E-224 T 22-04-2016 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 PANTHER PTHR30537:SF14 1 312 9.3E-224 T 22-04-2016 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 Gene3D G3DSA:1.10.10.10 8 87 7.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 SUPERFAMILY SSF46785 7 113 5.16E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS12970 0af41aeebb1b0e37f25b0cf2be8797c9 313 Pfam PF03466 LysR substrate binding domain 90 294 4.3E-43 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 9.0E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 PANTHER PTHR11260:SF44 9 207 5.6E-121 T 22-04-2016 SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 SUPERFAMILY SSF52833 11 111 1.68E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 PANTHER PTHR11260 9 207 5.6E-121 T 22-04-2016 SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 Gene3D G3DSA:3.40.30.10 9 101 2.3E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 SUPERFAMILY SSF47616 82 206 1.85E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 81 4.2E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS15740 1935d9285c45af77b3236481b511203d 209 Gene3D G3DSA:1.20.1050.10 102 206 1.4E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS08870 062cc1466276727ab178d810b0e93941 388 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 9 384 6.2E-143 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SAMA_RS08870 062cc1466276727ab178d810b0e93941 388 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 9 384 8.3E-145 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SAMA_RS08870 062cc1466276727ab178d810b0e93941 388 PIRSF PIRSF015557 4 388 1.4E-152 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 SAMA_RS15165 e53455320b390915c5613e20b10deede 313 PANTHER PTHR34856:SF2 4 311 1.3E-96 T 22-04-2016 SAMA_RS15165 e53455320b390915c5613e20b10deede 313 Gene3D G3DSA:1.20.1630.10 10 218 2.3E-8 T 22-04-2016 SAMA_RS15165 e53455320b390915c5613e20b10deede 313 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 2 311 1.7E-107 T 22-04-2016 IPR017566 NrfD SAMA_RS15165 e53455320b390915c5613e20b10deede 313 Pfam PF03916 Polysulphide reductase, NrfD 3 311 3.6E-68 T 22-04-2016 IPR005614 NrfD family SAMA_RS15165 e53455320b390915c5613e20b10deede 313 PANTHER PTHR34856 4 311 1.3E-96 T 22-04-2016 SAMA_RS05735 db9ba7b3212d015689f7812ce8000b3d 175 Pfam PF03891 Domain of unknown function (DUF333) 126 171 7.0E-17 T 22-04-2016 IPR005590 Protein of unknown function DUF333 SAMA_RS05735 db9ba7b3212d015689f7812ce8000b3d 175 Pfam PF03891 Domain of unknown function (DUF333) 55 103 1.4E-18 T 22-04-2016 IPR005590 Protein of unknown function DUF333 SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 186 8.4E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 SUPERFAMILY SSF47616 78 201 3.2E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 5.7E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 SUPERFAMILY SSF52833 1 103 2.69E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 PANTHER PTHR11260:SF285 1 207 2.0E-34 T 22-04-2016 SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 Gene3D G3DSA:3.40.30.10 1 94 3.9E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 PANTHER PTHR11260 1 207 2.0E-34 T 22-04-2016 SAMA_RS18440 26b6cca8722dae4628e5575c41a6eeb1 217 Gene3D G3DSA:1.20.1050.10 95 202 1.8E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SAMA_RS02285 df36b4e296035ebe4435b5388fc7b625 96 Gene3D G3DSA:1.10.150.20 11 91 4.4E-20 T 22-04-2016 SAMA_RS02285 df36b4e296035ebe4435b5388fc7b625 96 Pfam PF11731 Pathogenicity locus 8 91 3.8E-35 T 22-04-2016 IPR021725 Pathogenicity locus SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 Pfam PF12146 Serine aminopeptidase, S33 58 196 7.0E-10 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 Gene3D G3DSA:3.40.50.1820 290 312 1.5E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 Gene3D G3DSA:3.40.50.1820 216 258 1.5E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 Gene3D G3DSA:3.40.50.1820 9 178 1.5E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 SUPERFAMILY SSF53474 20 166 6.43E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05115 d439959412ac7faf15373ffca992a311 325 SUPERFAMILY SSF53474 231 309 6.43E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 3.3E-120 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 Pfam PF00733 Asparagine synthase 211 365 1.2E-56 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 Pfam PF00733 Asparagine synthase 368 511 5.2E-40 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 SUPERFAMILY SSF56235 1 196 2.23E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.1E-42 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 Gene3D G3DSA:3.60.20.10 1 191 1.8E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 Gene3D G3DSA:3.40.50.620 192 510 9.0E-115 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 PANTHER PTHR11772 2 538 1.4E-285 T 22-04-2016 SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 SUPERFAMILY SSF52402 204 473 4.19E-74 T 22-04-2016 SAMA_RS10985 24d501f0d82c52b7b0d1eddd5ae0d8da 554 PANTHER PTHR11772:SF11 2 538 1.4E-285 T 22-04-2016 SAMA_RS18915 55e37d4dbab2a43cd8e18c69a8cdd231 478 Pfam PF09362 Domain of unknown function (DUF1996) 167 428 2.6E-47 T 22-04-2016 IPR018535 Domain of unknown function DUF1996 SAMA_RS18915 55e37d4dbab2a43cd8e18c69a8cdd231 478 PANTHER PTHR32208:SF28 261 443 5.0E-26 T 22-04-2016 SAMA_RS18915 55e37d4dbab2a43cd8e18c69a8cdd231 478 PANTHER PTHR32208 261 443 5.0E-26 T 22-04-2016 SAMA_RS03605 a854d45c59d76554efadb70e018a3008 96 PANTHER PTHR37811 1 94 2.0E-12 T 22-04-2016 SAMA_RS03605 a854d45c59d76554efadb70e018a3008 96 Gene3D G3DSA:3.30.70.900 38 94 1.7E-8 T 22-04-2016 SAMA_RS03605 a854d45c59d76554efadb70e018a3008 96 SUPERFAMILY SSF54909 1 94 1.15E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS03605 a854d45c59d76554efadb70e018a3008 96 PANTHER PTHR37811:SF2 1 94 2.0E-12 T 22-04-2016 SAMA_RS16730 84452995bb5e0b6028c4d37d0fe09af6 178 Gene3D G3DSA:3.40.30.10 59 177 4.1E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16730 84452995bb5e0b6028c4d37d0fe09af6 178 PANTHER PTHR10438 96 178 1.5E-12 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SAMA_RS16730 84452995bb5e0b6028c4d37d0fe09af6 178 SUPERFAMILY SSF52833 85 173 8.12E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16730 84452995bb5e0b6028c4d37d0fe09af6 178 Pfam PF14595 Thioredoxin 63 167 1.6E-13 T 22-04-2016 SAMA_RS08280 4c7d699cc2781ac9f91d535e9fb9466b 336 PANTHER PTHR32010 28 258 3.7E-27 T 22-04-2016 SAMA_RS08280 4c7d699cc2781ac9f91d535e9fb9466b 336 Pfam PF14870 Photosynthesis system II assembly factor YCF48 115 186 6.2E-7 T 22-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain SAMA_RS08280 4c7d699cc2781ac9f91d535e9fb9466b 336 Pfam PF14870 Photosynthesis system II assembly factor YCF48 63 109 9.1E-9 T 22-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain SAMA_RS08280 4c7d699cc2781ac9f91d535e9fb9466b 336 Gene3D G3DSA:2.130.10.140 60 330 1.1E-21 T 22-04-2016 SAMA_RS08280 4c7d699cc2781ac9f91d535e9fb9466b 336 SUPERFAMILY SSF50939 37 295 2.16E-27 T 22-04-2016 IPR011040 Sialidases SAMA_RS13830 3f78528427dfa9ae672b76a75d13d605 303 Gene3D G3DSA:1.10.3720.10 15 291 4.5E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13830 3f78528427dfa9ae672b76a75d13d605 303 PANTHER PTHR30193 13 302 8.0E-138 T 22-04-2016 SAMA_RS13830 3f78528427dfa9ae672b76a75d13d605 303 SUPERFAMILY SSF161098 15 299 2.35E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13830 3f78528427dfa9ae672b76a75d13d605 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 296 6.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SAMA_RS13830 3f78528427dfa9ae672b76a75d13d605 303 PANTHER PTHR30193:SF5 13 302 8.0E-138 T 22-04-2016 SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 Pfam PF03061 Thioesterase superfamily 16 99 5.4E-17 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 PANTHER PTHR31793:SF9 1 130 8.1E-46 T 22-04-2016 SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 SUPERFAMILY SSF54637 1 128 6.54E-40 T 22-04-2016 IPR029069 HotDog domain SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 126 1.8E-47 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 121 2.7E-33 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 Gene3D G3DSA:3.10.129.10 1 128 1.0E-46 T 22-04-2016 IPR029069 HotDog domain SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 PANTHER PTHR31793 1 130 8.1E-46 T 22-04-2016 SAMA_RS10930 ebef370dbfe23a9ddcda15dd21e8d137 133 PIRSF PIRSF003230 1 133 2.4E-43 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 PANTHER PTHR32502:SF12 12 178 1.5E-118 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 PANTHER PTHR32502:SF12 222 411 1.5E-118 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 Gene3D G3DSA:3.20.20.70 5 290 1.5E-122 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 SUPERFAMILY SSF51569 4 417 7.51E-141 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 Pfam PF08013 Tagatose 6 phosphate kinase 4 416 1.1E-170 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 Gene3D G3DSA:1.10.400.20 291 401 1.1E-36 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 PANTHER PTHR32502 12 178 1.5E-118 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 PANTHER PTHR32502 222 411 1.5E-118 T 22-04-2016 SAMA_RS06260 0975436eed65bbb7fda405d4ddb99b75 422 PIRSF PIRSF009264 1 421 3.6E-157 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.7E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 Pfam PF00312 Ribosomal protein S15 8 88 3.8E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 SMART SM01387 8 88 1.3E-49 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.631 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 Gene3D G3DSA:1.10.287.10 3 89 7.2E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 5.0E-40 T 22-04-2016 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 SUPERFAMILY SSF47060 3 89 2.03E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SAMA_RS05045 ede510616e136ebf7ace1a6ad90f7933 89 PANTHER PTHR23321 1 89 4.5E-44 T 22-04-2016 SAMA_RS05675 23cef2569a9d0e340c8017779f46a494 290 SUPERFAMILY SSF103481 36 137 9.02E-13 T 22-04-2016 SAMA_RS05675 23cef2569a9d0e340c8017779f46a494 290 SUPERFAMILY SSF103481 174 273 3.27E-15 T 22-04-2016 SAMA_RS05675 23cef2569a9d0e340c8017779f46a494 290 PANTHER PTHR22911 1 288 2.7E-43 T 22-04-2016 SAMA_RS05675 23cef2569a9d0e340c8017779f46a494 290 Pfam PF00892 EamA-like transporter family 142 268 1.7E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS05675 23cef2569a9d0e340c8017779f46a494 290 Pfam PF00892 EamA-like transporter family 3 133 4.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS07645 ca91a8c62375dad62ed156a62b73960c 326 PANTHER PTHR32347:SF12 64 324 2.0E-12 T 22-04-2016 SAMA_RS07645 ca91a8c62375dad62ed156a62b73960c 326 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 143 291 2.3E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS07645 ca91a8c62375dad62ed156a62b73960c 326 PANTHER PTHR32347 64 324 2.0E-12 T 22-04-2016 SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 SMART SM00382 28 221 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 Gene3D G3DSA:3.40.50.300 4 240 4.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 PANTHER PTHR24220 5 247 6.3E-124 T 22-04-2016 SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 Pfam PF08402 TOBE domain 275 340 2.6E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 SUPERFAMILY SSF52540 4 244 9.55E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 SUPERFAMILY SSF50331 239 340 1.96E-6 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 PANTHER PTHR24220:SF282 5 247 6.3E-124 T 22-04-2016 SAMA_RS03530 681afdc1773b300c920ec1896738958a 341 Pfam PF00005 ABC transporter 19 163 1.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 SMART SM00905 8 118 6.3E-33 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 Gene3D G3DSA:3.30.1130.10 5 119 2.2E-35 T 22-04-2016 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 TIGRFAM TIGR00526 folB_dom: FolB domain 7 121 9.4E-30 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 Pfam PF02152 Dihydroneopterin aldolase 8 116 7.9E-27 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 PANTHER PTHR20941 1 118 8.8E-56 T 22-04-2016 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 SUPERFAMILY SSF55620 6 119 8.89E-30 T 22-04-2016 SAMA_RS07745 f0caa62c4f498cb4945f2ded46fa3441 122 PANTHER PTHR20941:SF6 1 118 8.8E-56 T 22-04-2016 SAMA_RS16655 c6e0d8a55db4de975ac6bfb457bc7415 346 Pfam PF13528 Glycosyl transferase family 1 1 126 1.0E-18 T 22-04-2016 SAMA_RS16655 c6e0d8a55db4de975ac6bfb457bc7415 346 Pfam PF13528 Glycosyl transferase family 1 170 300 1.8E-17 T 22-04-2016 SAMA_RS16655 c6e0d8a55db4de975ac6bfb457bc7415 346 SUPERFAMILY SSF53756 1 303 2.51E-14 T 22-04-2016 SAMA_RS16655 c6e0d8a55db4de975ac6bfb457bc7415 346 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 303 9.1E-70 T 22-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 46 60 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 PANTHER PTHR11079:SF62 1 216 8.2E-96 T 22-04-2016 SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 PANTHER PTHR11079 1 216 8.2E-96 T 22-04-2016 SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 SUPERFAMILY SSF55120 3 185 1.44E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 2 214 1.0E-72 T 22-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- SAMA_RS18380 ab5e8ec6002f5ad472acddf7b94acc5e 224 Pfam PF00849 RNA pseudouridylate synthase 11 152 1.4E-24 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 SMART SM00267 282 446 3.6E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 Gene3D G3DSA:3.30.70.270 295 445 1.6E-47 T 22-04-2016 SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 Pfam PF03924 CHASE domain 111 199 3.4E-15 T 22-04-2016 IPR006189 CHASE domain SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 SMART SM01079 49 216 1.3E-34 T 22-04-2016 IPR006189 CHASE domain SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 445 9.2E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 444 1.8E-44 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 SUPERFAMILY SSF55073 298 444 3.69E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 PANTHER PTHR10799:SF774 323 449 2.2E-31 T 22-04-2016 SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 PANTHER PTHR10799:SF774 185 298 2.2E-31 T 22-04-2016 SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 PANTHER PTHR10799 323 449 2.2E-31 T 22-04-2016 SAMA_RS17735 6cea75861e6a4b103ebfc21eba14dcb0 449 PANTHER PTHR10799 185 298 2.2E-31 T 22-04-2016 SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 PRINTS PR00332 Histidine triad family signature 27 45 1.13E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 PRINTS PR00332 Histidine triad family signature 6 22 1.13E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 PRINTS PR00332 Histidine triad family signature 95 105 1.13E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 PANTHER PTHR23089 2 112 3.1E-44 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 SUPERFAMILY SSF54197 2 113 1.7E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 Gene3D G3DSA:3.30.428.10 3 110 9.6E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 Pfam PF01230 HIT domain 12 108 1.5E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site SAMA_RS07535 f35202bbaf647c6154b86f7f3c8b5cfe 117 PANTHER PTHR23089:SF2 2 112 3.1E-44 T 22-04-2016 SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 Gene3D G3DSA:1.20.144.10 53 116 1.5E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 Gene3D G3DSA:1.20.144.10 156 234 1.5E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 SUPERFAMILY SSF48317 19 123 5.36E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 SUPERFAMILY SSF48317 159 247 5.36E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 Pfam PF01569 PAP2 superfamily 89 238 4.0E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 SMART SM00014 88 241 9.1E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 PANTHER PTHR14969 50 130 4.5E-25 T 22-04-2016 SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 PANTHER PTHR14969 171 245 4.5E-25 T 22-04-2016 SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 PANTHER PTHR14969:SF22 50 130 4.5E-25 T 22-04-2016 SAMA_RS17065 6ad21cf7995edf2fcda50c0fd692a9ee 260 PANTHER PTHR14969:SF22 171 245 4.5E-25 T 22-04-2016 SAMA_RS11780 f8e38a2cd8b8686ce272b103ae09887a 225 Gene3D G3DSA:3.40.50.10320 4 221 9.4E-40 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SAMA_RS11780 f8e38a2cd8b8686ce272b103ae09887a 225 SUPERFAMILY SSF102588 4 221 7.46E-39 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain SAMA_RS11780 f8e38a2cd8b8686ce272b103ae09887a 225 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 124 2.2E-13 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Gene3D G3DSA:2.40.170.20 671 948 3.3E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Gene3D G3DSA:2.40.170.20 178 519 3.3E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Gene3D G3DSA:2.40.170.20 592 635 3.3E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552:SF16 523 640 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552:SF16 664 948 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552:SF16 288 416 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552:SF16 50 246 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 172 2.0E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552 523 640 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552 664 948 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552 288 416 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 PANTHER PTHR32552 50 246 8.1E-59 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Gene3D G3DSA:2.170.130.10 71 177 4.1E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 SUPERFAMILY SSF56935 291 504 8.55E-85 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 SUPERFAMILY SSF56935 43 240 8.55E-85 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 SUPERFAMILY SSF56935 581 948 8.55E-85 T 22-04-2016 SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 51 948 7.9E-189 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS06245 096d2b6960edf3aa446cd6c822a931ab 948 Pfam PF00593 TonB dependent receptor 678 944 1.6E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 Gene3D G3DSA:3.30.565.10 415 554 3.3E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 SUPERFAMILY SSF55781 229 351 3.47E-7 T 22-04-2016 IPR029016 GAF domain-like SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 SUPERFAMILY SSF55874 420 552 7.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 Pfam PF07694 5TMR of 5TMR-LYT 25 193 2.7E-58 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 PANTHER PTHR34220:SF3 1 559 1.3E-273 T 22-04-2016 SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 PANTHER PTHR34220 1 559 1.3E-273 T 22-04-2016 SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 SMART SM00065 224 361 0.003 T 22-04-2016 IPR003018 GAF domain GO:0005515 SAMA_RS06715 7543f80c355f6eb7e8296d2eee16e478 569 Pfam PF06580 Histidine kinase 367 444 4.7E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 Gene3D G3DSA:3.40.50.10330 3 150 7.7E-38 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 Pfam PF01513 ATP-NAD kinase 7 271 1.8E-67 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 SUPERFAMILY SSF111331 7 289 6.54E-92 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.213 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 PANTHER PTHR20275 7 288 4.1E-107 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS12735 1cf64a0330a9105d7f57e4b753441188 292 Gene3D G3DSA:2.60.200.30 151 261 8.7E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 76 2.3E-6 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 149 285 1.5E-4 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 SUPERFAMILY SSF55620 1 153 1.5E-27 T 22-04-2016 SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 SUPERFAMILY SSF55620 149 288 1.33E-21 T 22-04-2016 SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 Gene3D G3DSA:3.30.479.10 15 132 4.5E-18 T 22-04-2016 SAMA_RS08130 2ec2e0456212be960adb21d31b77d97f 294 Gene3D G3DSA:3.30.479.10 151 287 8.8E-13 T 22-04-2016 SAMA_RS09670 4fe74f5732ab3d7893a48638d7b7d92f 239 PANTHER PTHR38037 97 239 5.7E-38 T 22-04-2016 SAMA_RS09670 4fe74f5732ab3d7893a48638d7b7d92f 239 Pfam PF05618 Putative ATP-dependant zinc protease 105 238 2.2E-38 T 22-04-2016 SAMA_RS09670 4fe74f5732ab3d7893a48638d7b7d92f 239 SUPERFAMILY SSF50630 106 237 1.12E-37 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS09670 4fe74f5732ab3d7893a48638d7b7d92f 239 Gene3D G3DSA:2.40.70.10 102 231 1.2E-41 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS06235 219a9dbebb92831afec0e3c06e96fed7 127 Gene3D G3DSA:3.10.180.10 7 125 1.4E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS06235 219a9dbebb92831afec0e3c06e96fed7 127 SUPERFAMILY SSF54593 6 126 2.42E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS06235 219a9dbebb92831afec0e3c06e96fed7 127 PANTHER PTHR33993 5 125 1.2E-34 T 22-04-2016 SAMA_RS06235 219a9dbebb92831afec0e3c06e96fed7 127 PANTHER PTHR33993:SF4 5 125 1.2E-34 T 22-04-2016 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 SUPERFAMILY SSF64518 1 272 3.27E-80 T 22-04-2016 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.1E-36 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 272 4.4E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 PRINTS PR00207 Flagellin signature 37 54 2.8E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 PRINTS PR00207 Flagellin signature 111 134 2.8E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 PRINTS PR00207 Flagellin signature 76 95 2.8E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 Gene3D G3DSA:1.20.1330.10 54 228 8.4E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 PANTHER PTHR30244 2 272 5.2E-108 T 22-04-2016 SAMA_RS12070 315a3aa56d34449f36b7c91486f49e98 272 PANTHER PTHR30244:SF1 2 272 5.2E-108 T 22-04-2016 SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 PANTHER PTHR17490 1 205 8.4E-103 T 22-04-2016 SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 Gene3D G3DSA:3.90.870.10 2 203 4.7E-65 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 204 2.9E-69 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 SUPERFAMILY SSF55821 1 204 7.02E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 Pfam PF01300 Telomere recombination 23 198 1.2E-47 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SAMA_RS11115 6ace7554b159f30e3ce1cb5bd2dec130 206 PANTHER PTHR17490:SF7 1 205 8.4E-103 T 22-04-2016 SAMA_RS02500 a9cf3c9e51bc389c65c855c44629df49 856 Pfam PF14341 PilX N-terminal 64 125 2.0E-10 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 2.7E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 Pfam PF00593 TonB dependent receptor 407 644 1.5E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 SUPERFAMILY SSF56935 26 646 6.02E-103 T 22-04-2016 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 PANTHER PTHR32552 7 646 3.6E-111 T 22-04-2016 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 Gene3D G3DSA:2.170.130.10 43 151 4.4E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 Gene3D G3DSA:2.40.170.20 152 645 7.5E-84 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13785 aee58c8d3eb1681efc18946ac269c518 646 PANTHER PTHR32552:SF0 7 646 3.6E-111 T 22-04-2016 SAMA_RS13580 fa1f9377c1f3da8497d8b49bd4e4601d 333 Pfam PF14321 Domain of unknown function (DUF4382) 40 177 5.3E-15 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 Gene3D G3DSA:1.10.10.10 5 138 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 SMART SM00347 25 131 8.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 SUPERFAMILY SSF46785 6 139 9.23E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 Pfam PF12802 MarR family 30 90 1.1E-12 T 22-04-2016 SAMA_RS14090 69fa46143a46b252a131dbcadbf06b87 188 PANTHER PTHR33164 6 151 1.2E-13 T 22-04-2016 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 264 15.816 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 SUPERFAMILY SSF81336 85 258 1.44E-44 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 25 259 2.6E-47 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 Pfam PF00119 ATP synthase A chain 36 258 6.8E-56 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 PANTHER PTHR11410 26 264 6.0E-100 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 ProSitePatterns PS00449 ATP synthase a subunit signature. 194 203 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 Gene3D G3DSA:1.20.120.220 86 264 3.0E-55 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 PANTHER PTHR11410:SF7 26 264 6.0E-100 T 22-04-2016 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 PRINTS PR00123 ATP synthase A subunit signature 244 259 3.399194E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 PRINTS PR00123 ATP synthase A subunit signature 191 213 3.399194E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS18975 60fd9c122b40e2c26450a36310ba72ac 264 PRINTS PR00123 ATP synthase A subunit signature 93 109 3.399194E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SAMA_RS10990 24cfd1a7585694b17717ef8d7b59806b 64 Pfam PF06945 Protein of unknown function (DUF1289) 6 51 2.7E-15 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 SAMA_RS06625 334e518baf0637c5550dda38ac76bc6d 133 Gene3D G3DSA:3.30.70.970 3 112 2.2E-10 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS06625 334e518baf0637c5550dda38ac76bc6d 133 Pfam PF06877 Regulator of ribonuclease activity B 6 105 1.1E-23 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS06625 334e518baf0637c5550dda38ac76bc6d 133 SUPERFAMILY SSF89946 1 115 1.31E-30 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SAMA_RS09685 5fd89802b6e37d7cc904a8710373770b 530 SUPERFAMILY SSF55486 38 294 3.52E-14 T 22-04-2016 SAMA_RS09685 5fd89802b6e37d7cc904a8710373770b 530 Gene3D G3DSA:1.10.1370.10 170 246 4.4E-6 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SAMA_RS15875 26af23e179f9aa2b2a610a1e02ac7ad9 63 PANTHER PTHR37424 2 63 6.1E-17 T 22-04-2016 SAMA_RS15875 26af23e179f9aa2b2a610a1e02ac7ad9 63 PANTHER PTHR37424:SF1 2 63 6.1E-17 T 22-04-2016 SAMA_RS15875 26af23e179f9aa2b2a610a1e02ac7ad9 63 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 3.2E-13 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SAMA_RS02745 123216c36f18600ddb9adf3440735d3b 341 PANTHER PTHR12147 42 331 1.0E-29 T 22-04-2016 SAMA_RS02745 123216c36f18600ddb9adf3440735d3b 341 Gene3D G3DSA:3.40.630.10 36 333 6.0E-48 T 22-04-2016 SAMA_RS02745 123216c36f18600ddb9adf3440735d3b 341 Pfam PF04389 Peptidase family M28 123 326 7.6E-39 T 22-04-2016 IPR007484 Peptidase M28 SAMA_RS02745 123216c36f18600ddb9adf3440735d3b 341 SUPERFAMILY SSF53187 26 332 7.93E-51 T 22-04-2016 SAMA_RS02190 1675354e1d70373cf67e03ba9a7693d7 105 SUPERFAMILY SSF54909 10 102 2.35E-23 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SAMA_RS02190 1675354e1d70373cf67e03ba9a7693d7 105 PANTHER PTHR33336:SF5 6 102 1.1E-23 T 22-04-2016 SAMA_RS02190 1675354e1d70373cf67e03ba9a7693d7 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 13 84 1.7E-13 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SAMA_RS02190 1675354e1d70373cf67e03ba9a7693d7 105 Gene3D G3DSA:3.30.70.900 10 103 4.8E-29 T 22-04-2016 SAMA_RS02190 1675354e1d70373cf67e03ba9a7693d7 105 PANTHER PTHR33336 6 102 1.1E-23 T 22-04-2016 SAMA_RS09485 608b5e13faff9f04190523009cf4b72d 195 PANTHER PTHR35562 1 186 1.4E-42 T 22-04-2016 SAMA_RS09485 608b5e13faff9f04190523009cf4b72d 195 SUPERFAMILY SSF160443 94 176 1.44E-10 T 22-04-2016 IPR002625 Smr domain SAMA_RS09485 608b5e13faff9f04190523009cf4b72d 195 SMART SM00463 92 176 4.6E-5 T 22-04-2016 IPR002625 Smr domain SAMA_RS09485 608b5e13faff9f04190523009cf4b72d 195 PANTHER PTHR35562:SF2 1 186 1.4E-42 T 22-04-2016 SAMA_RS09485 608b5e13faff9f04190523009cf4b72d 195 Pfam PF01713 Smr domain 96 176 1.2E-13 T 22-04-2016 IPR002625 Smr domain SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 PRINTS PR01021 OMPA domain signature 129 151 1.2E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 PRINTS PR01021 OMPA domain signature 159 174 1.2E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 PRINTS PR01021 OMPA domain signature 174 190 1.2E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 Pfam PF00691 OmpA family 128 223 3.0E-21 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 SUPERFAMILY SSF103088 116 232 7.72E-38 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 Gene3D G3DSA:3.30.1330.60 106 229 2.2E-39 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 Pfam PF13488 Glycine zipper 51 98 2.8E-12 T 22-04-2016 SAMA_RS16150 7a7443570b0348e02d9d11eb062aa564 233 PANTHER PTHR30128 26 232 2.0E-64 T 22-04-2016 SAMA_RS16785 e6f4ad096d2b172cb5878e2afc8c60fa 458 Pfam PF14344 Domain of unknown function (DUF4397) 382 453 3.4E-6 T 22-04-2016 IPR025510 Domain of unknown function DUF4397 SAMA_RS16785 e6f4ad096d2b172cb5878e2afc8c60fa 458 Pfam PF14344 Domain of unknown function (DUF4397) 27 153 3.8E-23 T 22-04-2016 IPR025510 Domain of unknown function DUF4397 SAMA_RS16785 e6f4ad096d2b172cb5878e2afc8c60fa 458 Pfam PF14344 Domain of unknown function (DUF4397) 251 373 4.1E-21 T 22-04-2016 IPR025510 Domain of unknown function DUF4397 SAMA_RS09700 b55d6e3d23c51d51234c0e5b70f14524 346 Pfam PF12118 SprA-related family 2 229 1.8E-101 T 22-04-2016 IPR021973 SprA-related family SAMA_RS05540 96094bec4322fd40136299529fd5a296 138 PANTHER PTHR30353 4 135 4.2E-34 T 22-04-2016 IPR032818 DedA family SAMA_RS05540 96094bec4322fd40136299529fd5a296 138 PANTHER PTHR30353:SF12 4 135 4.2E-34 T 22-04-2016 SAMA_RS09915 c23a48247dd013224966a08a31a357ec 520 Pfam PF02646 RmuC family 180 476 2.5E-105 T 22-04-2016 IPR003798 DNA recombination RmuC SAMA_RS09915 c23a48247dd013224966a08a31a357ec 520 PANTHER PTHR30563 1 509 1.4E-122 T 22-04-2016 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 SUPERFAMILY SSF103473 476 506 4.45E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 SUPERFAMILY SSF103473 28 284 4.45E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 SUPERFAMILY SSF103473 313 423 4.45E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 PANTHER PTHR23517 65 276 5.3E-23 T 22-04-2016 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 PANTHER PTHR23517 305 426 5.3E-23 T 22-04-2016 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 Pfam PF07690 Major Facilitator Superfamily 62 411 8.7E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 Gene3D G3DSA:1.20.1250.20 31 221 4.6E-25 T 22-04-2016 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 Gene3D G3DSA:1.20.1250.20 477 499 3.0E-13 T 22-04-2016 SAMA_RS14890 dbbbb463b914020b9a9a756078342fd6 512 Gene3D G3DSA:1.20.1250.20 236 424 3.0E-13 T 22-04-2016 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 PANTHER PTHR12029 88 331 1.2E-95 T 22-04-2016 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 Gene3D G3DSA:3.40.1280.10 182 332 2.3E-41 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 SMART SM00967 96 171 6.2E-12 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 PANTHER PTHR12029:SF57 88 331 1.2E-95 T 22-04-2016 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 SUPERFAMILY SSF75217 162 332 3.72E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 SUPERFAMILY SSF55315 93 166 5.89E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 Gene3D G3DSA:3.30.1330.30 93 165 2.0E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 Pfam PF00588 SpoU rRNA Methylase family 188 325 2.4E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 97 168 1.9E-12 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SAMA_RS13180 4e121a5c47ae6fa41cdebb2ebbc11b92 333 PIRSF PIRSF006280 2 333 1.2E-88 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS08315 df9b1cf54be8173571e81a2ac87a9ec8 1042 SUPERFAMILY SSF54001 311 446 6.13E-10 T 22-04-2016 SAMA_RS08315 df9b1cf54be8173571e81a2ac87a9ec8 1042 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 112 278 3.2E-32 T 22-04-2016 IPR024618 Domain of unknown function DUF3857 SAMA_RS08315 df9b1cf54be8173571e81a2ac87a9ec8 1042 Pfam PF01841 Transglutaminase-like superfamily 326 402 4.4E-6 T 22-04-2016 IPR002931 Transglutaminase-like SAMA_RS19145 6dd37f1accc0b77d550e9c5c59357f17 273 Pfam PF08378 Nuclease-related domain 77 187 3.5E-22 T 22-04-2016 IPR011528 Nuclease-related domain, NERD SAMA_RS13250 060a16cf22fda1c5361762b48b356b6c 601 Gene3D G3DSA:2.40.170.20 144 541 2.9E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS13250 060a16cf22fda1c5361762b48b356b6c 601 SUPERFAMILY SSF56935 81 261 1.23E-13 T 22-04-2016 SAMA_RS13250 060a16cf22fda1c5361762b48b356b6c 601 SUPERFAMILY SSF56935 288 583 1.23E-13 T 22-04-2016 SAMA_RS17795 9177aa4757661f003159fcf5a09be9b6 183 Pfam PF13453 Transcription factor zinc-finger 2 43 1.6E-8 T 22-04-2016 IPR027392 Transcription factor zinc-finger SAMA_RS00570 2a7c86cb66153551398a79d824449204 225 Pfam PF09335 SNARE associated Golgi protein 67 182 2.1E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein SAMA_RS00570 2a7c86cb66153551398a79d824449204 225 PANTHER PTHR12677 5 225 1.9E-20 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 Pfam PF01578 Cytochrome C assembly protein 27 184 2.5E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 3.0E-77 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PANTHER PTHR30071 1 224 1.3E-82 T 22-04-2016 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01270 74de61e61db84a6a42ef63bc3b3cb3f5 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.5E-61 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS18795 91dd168a5beccd1fe2a783fccc46e2c8 152 Pfam PF11749 Protein of unknown function (DUF3305) 18 135 7.2E-20 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 Pfam PF00326 Prolyl oligopeptidase family 492 695 1.8E-50 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 495 519 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 486 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 623 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 627 649 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 553 573 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 523 542 1.9E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 22 425 6.2E-37 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PANTHER PTHR11757:SF13 23 695 0.0 T 22-04-2016 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 PANTHER PTHR11757 23 695 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 Gene3D G3DSA:3.40.50.1820 374 695 5.7E-100 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 SUPERFAMILY SSF50993 20 433 7.59E-59 T 22-04-2016 SAMA_RS09160 e5babb9a841a7cca9f2deca0a6d72cf9 696 SUPERFAMILY SSF53474 437 694 1.09E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 SUPERFAMILY SSF55073 145 294 2.28E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 SMART SM00267 130 296 4.3E-52 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 291 7.6E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 PANTHER PTHR10799:SF750 67 291 7.6E-24 T 22-04-2016 SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 PANTHER PTHR10799 67 291 7.6E-24 T 22-04-2016 SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 Gene3D G3DSA:3.30.70.270 142 295 4.9E-47 T 22-04-2016 SAMA_RS06065 81c4af985112c9fc1339fdf5fbfadf37 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 294 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS09100 49c035708b18a83afb6b813abae33ae2 108 SUPERFAMILY SSF55331 1 108 7.94E-29 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily SAMA_RS09100 49c035708b18a83afb6b813abae33ae2 108 Pfam PF08921 Domain of unknown function (DUF1904) 1 107 8.8E-38 T 22-04-2016 IPR015017 Protein of unknown function DUF1904 SAMA_RS09100 49c035708b18a83afb6b813abae33ae2 108 Gene3D G3DSA:3.30.429.10 1 108 2.2E-32 T 22-04-2016 SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 PANTHER PTHR22617:SF35 72 245 6.4E-79 T 22-04-2016 SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 245 1.3E-75 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 PIRSF PIRSF002884 20 245 1.3E-85 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 Gene3D G3DSA:1.10.287.500 65 196 3.7E-47 T 22-04-2016 SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 SUPERFAMILY SSF75708 34 244 2.22E-66 T 22-04-2016 SAMA_RS11930 284ad95995b7e0ef3156b062880e3ef3 245 PANTHER PTHR22617 72 245 6.4E-79 T 22-04-2016 SAMA_RS02670 9d92c41c4b08ad3aa4a27896a2dd1d96 316 PANTHER PTHR22911:SF55 9 305 1.2E-100 T 22-04-2016 SAMA_RS02670 9d92c41c4b08ad3aa4a27896a2dd1d96 316 PANTHER PTHR22911 9 305 1.2E-100 T 22-04-2016 SAMA_RS02670 9d92c41c4b08ad3aa4a27896a2dd1d96 316 Pfam PF00892 EamA-like transporter family 159 293 4.8E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS02670 9d92c41c4b08ad3aa4a27896a2dd1d96 316 Pfam PF00892 EamA-like transporter family 9 142 5.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS02670 9d92c41c4b08ad3aa4a27896a2dd1d96 316 SUPERFAMILY SSF103481 42 145 1.57E-10 T 22-04-2016 SAMA_RS11765 2eba5219744128c0623ef25bc77ecab9 187 Gene3D G3DSA:2.160.10.10 89 185 1.2E-15 T 22-04-2016 SAMA_RS11765 2eba5219744128c0623ef25bc77ecab9 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 130 3.7E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11765 2eba5219744128c0623ef25bc77ecab9 187 SUPERFAMILY SSF51161 2 184 1.34E-20 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS11765 2eba5219744128c0623ef25bc77ecab9 187 Gene3D G3DSA:3.40.50.20 1 85 5.9E-16 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SAMA_RS17060 96f96cec5156b76e3f0f859fa70f8cce 479 PANTHER PTHR30092 31 473 3.9E-138 T 22-04-2016 SAMA_RS17060 96f96cec5156b76e3f0f859fa70f8cce 479 PIRSF PIRSF004548 35 476 8.3E-134 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD SAMA_RS17060 96f96cec5156b76e3f0f859fa70f8cce 479 Pfam PF06123 Inner membrane protein CreD 47 472 6.7E-131 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD SAMA_RS15280 11c680eaf1746ab728033f3c9833e055 229 PANTHER PTHR30249:SF4 1 228 1.7E-99 T 22-04-2016 SAMA_RS15280 11c680eaf1746ab728033f3c9833e055 229 PANTHER PTHR30249 1 228 1.7E-99 T 22-04-2016 SAMA_RS15280 11c680eaf1746ab728033f3c9833e055 229 Pfam PF04172 LrgB-like family 14 225 2.8E-64 T 22-04-2016 IPR007300 CidB/LrgB family SAMA_RS15265 5a320b03feaaffa474a9a8e82d1a92ff 188 SUPERFAMILY SSF53271 3 163 2.27E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS15265 5a320b03feaaffa474a9a8e82d1a92ff 188 Pfam PF00156 Phosphoribosyl transferase domain 10 165 7.9E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SAMA_RS15265 5a320b03feaaffa474a9a8e82d1a92ff 188 Gene3D G3DSA:3.40.50.2020 2 167 4.5E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 SUPERFAMILY SSF55073 139 285 5.49E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 Gene3D G3DSA:3.30.70.270 136 286 1.1E-43 T 22-04-2016 SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 PANTHER PTHR10799:SF750 162 284 1.0E-22 T 22-04-2016 SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 283 3.0E-37 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 PANTHER PTHR10799 162 284 1.0E-22 T 22-04-2016 SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 287 1.5E-41 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS19170 f3d63d4689898eed10e9be534c87b0e5 288 SMART SM00267 123 287 4.4E-47 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 SUPERFAMILY SSF55874 326 465 2.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 465 2.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PANTHER PTHR24423 210 466 1.2E-77 T 22-04-2016 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 Pfam PF00672 HAMP domain 198 259 5.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 8.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 8.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 8.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 8.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 Gene3D G3DSA:3.30.565.10 326 465 1.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 PANTHER PTHR24423:SF496 210 466 1.2E-77 T 22-04-2016 SAMA_RS17215 8ab14fe6d6fa1fee72c1221c1ac8e873 466 SMART SM00387 361 466 3.5E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS02705 39e1d95e0d6679dc8c1eec9c5632f87b 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 127 5.8E-6 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SAMA_RS02705 39e1d95e0d6679dc8c1eec9c5632f87b 191 SUPERFAMILY SSF88697 5 187 1.62E-43 T 22-04-2016 IPR015947 PUA-like domain SAMA_RS08045 e20d05a17a52775f6fafbcae17d70876 284 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 26 270 3.7E-60 T 22-04-2016 SAMA_RS08045 e20d05a17a52775f6fafbcae17d70876 284 SUPERFAMILY SSF53850 40 241 1.32E-29 T 22-04-2016 SAMA_RS08045 e20d05a17a52775f6fafbcae17d70876 284 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 23 284 8.7E-116 T 22-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein SAMA_RS08045 e20d05a17a52775f6fafbcae17d70876 284 PANTHER PTHR35841 8 280 1.5E-15 T 22-04-2016 SAMA_RS08045 e20d05a17a52775f6fafbcae17d70876 284 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 19 246 2.3E-52 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SAMA_RS00935 3a0e980a59616ae33c0f494c913d0d85 143 SUPERFAMILY SSF55729 4 139 1.89E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS00935 3a0e980a59616ae33c0f494c913d0d85 143 Gene3D G3DSA:3.40.630.30 5 142 2.8E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS00935 3a0e980a59616ae33c0f494c913d0d85 143 PANTHER PTHR23091 5 143 9.6E-23 T 22-04-2016 SAMA_RS00935 3a0e980a59616ae33c0f494c913d0d85 143 Pfam PF00583 Acetyltransferase (GNAT) family 52 123 6.7E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 Gene3D G3DSA:3.30.1060.10 135 299 2.2E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 Gene3D G3DSA:2.170.150.20 3 123 3.3E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 Pfam PF01641 SelR domain 3 115 1.4E-40 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 SUPERFAMILY SSF55068 131 300 3.66E-70 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 Pfam PF01625 Peptide methionine sulfoxide reductase 138 289 9.5E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 PANTHER PTHR10173:SF34 120 289 3.0E-75 T 22-04-2016 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 SUPERFAMILY SSF51316 2 123 1.62E-45 T 22-04-2016 IPR011057 Mss4-like SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 138 289 3.3E-57 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 PANTHER PTHR10173 120 289 3.0E-75 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SAMA_RS10395 40cb370a02c91c0273f61e3dc6ed8bf7 309 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 135 294 34.813 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PANTHER PTHR30115 1 112 5.2E-66 T 22-04-2016 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 SUPERFAMILY SSF54913 1 112 2.26E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.6E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 Gene3D G3DSA:3.30.70.120 1 112 3.5E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 SMART SM00938 4 105 2.8E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SAMA_RS04880 42f5153af128d91481fdf84e59b50a55 112 PIRSF PIRSF039144 1 112 3.5E-57 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SAMA_RS16465 cdd3459a5220de540f39e20ff73a752b 234 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 8 224 4.5E-62 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS16465 cdd3459a5220de540f39e20ff73a752b 234 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 212 2.5E-37 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS18280 d1d2beba4710097ef3ede66b39324b0f 140 PANTHER PTHR13355:SF5 18 132 1.5E-15 T 22-04-2016 SAMA_RS18280 d1d2beba4710097ef3ede66b39324b0f 140 PANTHER PTHR13355 18 132 1.5E-15 T 22-04-2016 SAMA_RS18280 d1d2beba4710097ef3ede66b39324b0f 140 Pfam PF13673 Acetyltransferase (GNAT) domain 31 126 3.5E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS18280 d1d2beba4710097ef3ede66b39324b0f 140 SUPERFAMILY SSF55729 15 125 6.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS18280 d1d2beba4710097ef3ede66b39324b0f 140 Gene3D G3DSA:3.40.630.30 18 127 6.8E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS09430 73ea29efbde3b2e1333346743c2eebf2 289 Pfam PF11207 Protein of unknown function (DUF2989) 14 214 8.8E-75 T 22-04-2016 IPR021372 Protein of unknown function DUF2989 SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 SMART SM00965 99 147 2.4E-4 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 Pfam PF07655 Secretin N-terminal domain 151 258 1.8E-28 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PRINTS PR00811 Bacterial general secretion pathway protein D signature 287 297 7.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PRINTS PR00811 Bacterial general secretion pathway protein D signature 525 539 7.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 381 7.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PRINTS PR00811 Bacterial general secretion pathway protein D signature 502 520 7.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 Pfam PF00263 Bacterial type II and III secretion system protein 362 537 2.5E-37 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 253 537 4.9E-88 T 22-04-2016 IPR013358 Pilus biogenesis, MshL SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PANTHER PTHR30332:SF8 204 559 2.8E-79 T 22-04-2016 SAMA_RS02440 c6f6a4b4cc9bda68b9d0628bf1251973 561 PANTHER PTHR30332 204 559 2.8E-79 T 22-04-2016 SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 PANTHER PTHR34772:SF1 1 91 3.7E-41 T 22-04-2016 SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.1E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 PANTHER PTHR34772 1 91 3.7E-41 T 22-04-2016 SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 SUPERFAMILY SSF50182 7 69 4.8E-24 T 22-04-2016 IPR010920 LSM domain SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 Gene3D G3DSA:2.30.30.100 1 69 3.4E-37 T 22-04-2016 SAMA_RS15775 785a5264fad32876737a09ff25c290cb 91 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SAMA_RS02100 36add14fc9ef78c9e8ced8210f31b5e9 154 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 3.5E-59 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 SAMA_RS02100 36add14fc9ef78c9e8ced8210f31b5e9 154 PIRSF PIRSF016548 1 154 1.4E-62 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 SAMA_RS07495 d1a9d06a100ddd11529694322e62a75e 248 PANTHER PTHR10108:SF855 11 144 8.3E-18 T 22-04-2016 SAMA_RS07495 d1a9d06a100ddd11529694322e62a75e 248 PANTHER PTHR10108 11 144 8.3E-18 T 22-04-2016 SAMA_RS07495 d1a9d06a100ddd11529694322e62a75e 248 Gene3D G3DSA:3.40.50.150 8 181 5.2E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07495 d1a9d06a100ddd11529694322e62a75e 248 SUPERFAMILY SSF53335 5 201 6.81E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07495 d1a9d06a100ddd11529694322e62a75e 248 Pfam PF08241 Methyltransferase domain 42 128 3.1E-16 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 24 258 8.1E-86 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 540 791 3.3E-88 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Pfam PF08335 GlnD PII-uridylyltransferase 289 426 9.3E-36 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Pfam PF08335 GlnD PII-uridylyltransferase 812 904 1.1E-8 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 SUPERFAMILY SSF81301 515 796 8.18E-87 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 SUPERFAMILY SSF81301 13 278 6.13E-88 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Gene3D G3DSA:3.30.460.10 109 277 3.6E-60 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Gene3D G3DSA:3.30.460.10 626 797 7.2E-59 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 PANTHER PTHR30621 17 936 0.0 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 20 931 19.126 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 SUPERFAMILY SSF81593 801 929 2.04E-28 T 22-04-2016 SAMA_RS13955 dd2bd9f74404f279c5824f16c6a4b4cc 943 SUPERFAMILY SSF81593 279 427 5.73E-38 T 22-04-2016 SAMA_RS11365 3a0880e267474ffcbe23e15443e49d46 234 Pfam PF11859 Protein of unknown function (DUF3379) 1 232 1.9E-87 T 22-04-2016 IPR021806 Protein of unknown function DUF3379 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 Gene3D G3DSA:3.40.50.150 202 382 1.5E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 PANTHER PTHR18895:SF6 91 383 1.7E-117 T 22-04-2016 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 312 318 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 383 47.306 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 PANTHER PTHR18895 91 383 1.7E-117 T 22-04-2016 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 PIRSF PIRSF037565 1 383 1.7E-160 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 SUPERFAMILY SSF53335 202 382 4.67E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13290 55d46f95b1502f3f527dc52dc40eb0f7 383 Pfam PF05175 Methyltransferase small domain 209 380 8.1E-56 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SAMA_RS11600 b23192a87f8f0780197738fba8641630 466 PANTHER PTHR33362 285 466 7.9E-238 T 22-04-2016 SAMA_RS11600 b23192a87f8f0780197738fba8641630 466 PANTHER PTHR33362 1 265 7.9E-238 T 22-04-2016 SAMA_RS11600 b23192a87f8f0780197738fba8641630 466 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 451 1.6E-107 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SAMA_RS11600 b23192a87f8f0780197738fba8641630 466 PANTHER PTHR33362:SF6 285 466 7.9E-238 T 22-04-2016 SAMA_RS11600 b23192a87f8f0780197738fba8641630 466 PANTHER PTHR33362:SF6 1 265 7.9E-238 T 22-04-2016 SAMA_RS05670 508c981793e0c434cd322f8de12de8a4 174 PANTHER PTHR13947 44 157 2.6E-17 T 22-04-2016 SAMA_RS05670 508c981793e0c434cd322f8de12de8a4 174 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 5.2E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS05670 508c981793e0c434cd322f8de12de8a4 174 SUPERFAMILY SSF55729 6 129 8.06E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05670 508c981793e0c434cd322f8de12de8a4 174 Gene3D G3DSA:3.40.630.30 35 133 3.7E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 Pfam PF04348 LppC putative lipoprotein 42 604 3.4E-108 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 PANTHER PTHR38038:SF1 1 609 6.4E-152 T 22-04-2016 SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 Gene3D G3DSA:3.40.50.2300 534 597 1.1E-47 T 22-04-2016 SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 Gene3D G3DSA:3.40.50.2300 261 367 1.1E-47 T 22-04-2016 SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 PANTHER PTHR38038 1 609 6.4E-152 T 22-04-2016 SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 Gene3D G3DSA:3.40.50.2300 368 533 3.6E-44 T 22-04-2016 SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 SUPERFAMILY SSF53822 263 427 6.06E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS17460 ab6460f2223237c01f028b970f0e5006 609 SUPERFAMILY SSF53822 455 608 6.06E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS09000 d42dd2697f1be19a997d410901c6d202 119 SUPERFAMILY SSF54292 14 95 4.98E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS09000 d42dd2697f1be19a997d410901c6d202 119 Gene3D G3DSA:3.10.20.30 28 94 5.2E-15 T 22-04-2016 IPR012675 Beta-grasp domain SAMA_RS09000 d42dd2697f1be19a997d410901c6d202 119 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 87 3.3E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SAMA_RS09000 d42dd2697f1be19a997d410901c6d202 119 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 Gene3D G3DSA:3.40.605.10 22 281 1.0E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 Gene3D G3DSA:3.40.309.10 282 469 1.1E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 PANTHER PTHR11699 1 498 0.0 T 22-04-2016 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 PANTHER PTHR11699:SF210 1 498 0.0 T 22-04-2016 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 SUPERFAMILY SSF53720 16 496 7.46E-163 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SAMA_RS13875 879c83fe20e649a110774aa035ea4a8b 498 Pfam PF00171 Aldehyde dehydrogenase family 34 493 5.4E-170 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 Pfam PF04972 BON domain 44 111 2.1E-9 T 22-04-2016 IPR007055 BON domain SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 Pfam PF04972 BON domain 121 185 1.1E-15 T 22-04-2016 IPR007055 BON domain SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 SMART SM00749 126 188 4.7E-4 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 SMART SM00749 48 111 69.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 PANTHER PTHR34606 1 188 2.2E-81 T 22-04-2016 SAMA_RS17475 b95108b5c6280aa7adfab44d0af9609f 188 PANTHER PTHR34606:SF4 1 188 2.2E-81 T 22-04-2016 SAMA_RS13085 4b19ef1e356f104fb1a115157bdbbeb9 266 PANTHER PTHR22726 24 257 1.4E-72 T 22-04-2016 SAMA_RS13085 4b19ef1e356f104fb1a115157bdbbeb9 266 Pfam PF01435 Peptidase family M48 60 242 1.3E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SAMA_RS13085 4b19ef1e356f104fb1a115157bdbbeb9 266 Gene3D G3DSA:3.30.2010.10 57 136 7.1E-18 T 22-04-2016 SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 PANTHER PTHR33540:SF1 28 344 4.0E-108 T 22-04-2016 SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 Gene3D G3DSA:3.90.1200.10 109 344 2.0E-60 T 22-04-2016 SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 Pfam PF01636 Phosphotransferase enzyme family 42 257 2.7E-22 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 PANTHER PTHR33540 28 344 4.0E-108 T 22-04-2016 SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 SUPERFAMILY SSF56112 26 330 4.45E-45 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS14710 6c19aae310bdb28c70d4bba5c16fe3df 348 Gene3D G3DSA:3.30.200.20 19 107 2.7E-23 T 22-04-2016 SAMA_RS18340 0b06ba9ca47431f0c48f46c30ddd3d10 152 Gene3D G3DSA:3.90.1170.40 4 150 2.9E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18340 0b06ba9ca47431f0c48f46c30ddd3d10 152 PANTHER PTHR23404:SF2 17 152 1.2E-45 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18340 0b06ba9ca47431f0c48f46c30ddd3d10 152 PANTHER PTHR23404 17 152 1.2E-45 T 22-04-2016 SAMA_RS18340 0b06ba9ca47431f0c48f46c30ddd3d10 152 SUPERFAMILY SSF54690 5 150 8.24E-54 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS18340 0b06ba9ca47431f0c48f46c30ddd3d10 152 Pfam PF02391 MoaE protein 9 121 2.0E-39 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 Gene3D G3DSA:1.25.40.10 352 445 6.4E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 Pfam PF13519 von Willebrand factor type A domain 92 198 1.2E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 Pfam PF07719 Tetratricopeptide repeat 399 431 2.0E-8 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 PANTHER PTHR22550:SF5 1 522 4.6E-80 T 22-04-2016 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 SMART SM00028 399 432 5.7E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 PANTHER PTHR22550 1 522 4.6E-80 T 22-04-2016 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 SUPERFAMILY SSF48452 352 450 2.09E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 SUPERFAMILY SSF53300 92 265 2.13E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS11350 f5a08329a141b703d9308188965b8ea9 701 SMART SM00327 88 256 1.7E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SAMA_RS03135 dabea9b7465b57e8e3575b2519d5d40c 390 Gene3D G3DSA:2.40.160.10 63 372 3.7E-19 T 22-04-2016 IPR023614 Porin domain SAMA_RS03135 dabea9b7465b57e8e3575b2519d5d40c 390 SUPERFAMILY SSF56935 63 390 1.56E-43 T 22-04-2016 SAMA_RS03135 dabea9b7465b57e8e3575b2519d5d40c 390 Pfam PF07396 Phosphate-selective porin O and P 79 373 3.8E-12 T 22-04-2016 IPR010870 Phosphate-selective porin O/P SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 Gene3D G3DSA:1.25.40.10 218 301 7.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SUPERFAMILY SSF48452 286 435 2.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 Gene3D G3DSA:1.25.40.10 302 435 6.2E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 PANTHER PTHR10098 78 149 2.0E-21 T 22-04-2016 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 PANTHER PTHR10098 181 432 2.0E-21 T 22-04-2016 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SMART SM00028 240 273 260.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SMART SM00028 116 150 95.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SMART SM00028 200 233 0.21 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SMART SM00028 320 353 77.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SMART SM00028 280 313 0.35 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 PANTHER PTHR10098:SF104 78 149 2.0E-21 T 22-04-2016 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 PANTHER PTHR10098:SF104 181 432 2.0E-21 T 22-04-2016 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 Pfam PF13424 Tetratricopeptide repeat 281 346 1.9E-8 T 22-04-2016 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 Gene3D G3DSA:1.25.40.10 113 217 2.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS12630 b22c130b760fe65536ca5741774b1659 716 SUPERFAMILY SSF48452 161 315 5.88E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 PANTHER PTHR23517:SF3 1 415 4.7E-53 T 22-04-2016 SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 SUPERFAMILY SSF103473 14 413 4.71E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 Pfam PF07690 Major Facilitator Superfamily 20 371 3.0E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 PANTHER PTHR23517 1 415 4.7E-53 T 22-04-2016 SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 Gene3D G3DSA:1.20.1250.20 239 420 2.4E-14 T 22-04-2016 SAMA_RS14870 bedae8b27a2f702a9d74cf98dd325a50 427 Gene3D G3DSA:1.20.1250.20 15 191 1.6E-24 T 22-04-2016 SAMA_RS07505 46398da69d784b1c6ca8215f62ac589f 235 Gene3D G3DSA:3.40.50.880 5 229 6.8E-73 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS07505 46398da69d784b1c6ca8215f62ac589f 235 PANTHER PTHR20842 4 235 6.5E-83 T 22-04-2016 SAMA_RS07505 46398da69d784b1c6ca8215f62ac589f 235 Hamap MF_00510 Peptidase E [pepE]. 3 217 47.612 T 22-04-2016 IPR023172 Peptidase S51, dipeptidase E GO:0016805 SAMA_RS07505 46398da69d784b1c6ca8215f62ac589f 235 Pfam PF03575 Peptidase family S51 6 207 2.3E-63 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 SAMA_RS07505 46398da69d784b1c6ca8215f62ac589f 235 SUPERFAMILY SSF52317 5 216 2.46E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 PANTHER PTHR10907:SF33 60 208 7.3E-19 T 22-04-2016 SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 Gene3D G3DSA:1.25.40.10 299 420 1.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 PANTHER PTHR10907 60 208 7.3E-19 T 22-04-2016 SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 Pfam PF00756 Putative esterase 61 204 9.8E-23 T 22-04-2016 IPR000801 Putative esterase SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 SUPERFAMILY SSF48452 323 417 1.47E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 SUPERFAMILY SSF53474 45 282 1.5E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS03875 9bd91fb8c7fa7989108aa0fc5025f527 437 Gene3D G3DSA:3.40.50.1820 58 283 9.1E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 SUPERFAMILY SSF56214 3 124 3.01E-29 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 8.2E-24 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 123 6.3E-39 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 124 2.4E-28 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 124 22.893 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 97 1.0E-44 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS04620 289eda5ece956d717db7205a141da19d 125 Gene3D G3DSA:3.90.470.20 1 124 1.2E-40 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 220 2.1E-81 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 SUPERFAMILY SSF52540 6 225 3.11E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 Pfam PF02224 Cytidylate kinase 8 223 3.1E-74 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 PANTHER PTHR21299 3 226 9.3E-84 T 22-04-2016 SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 33.267 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SAMA_RS09045 e33000a5665222cfc47c2b017bdc9880 231 Gene3D G3DSA:3.40.50.300 6 223 9.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 SUPERFAMILY SSF111369 54 268 9.55E-33 T 22-04-2016 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 PANTHER PTHR30469:SF9 9 354 2.9E-173 T 22-04-2016 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 343 8.2E-67 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 PANTHER PTHR30469 9 354 2.9E-173 T 22-04-2016 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 Gene3D G3DSA:2.40.50.100 157 191 1.2E-15 T 22-04-2016 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 Gene3D G3DSA:2.40.50.100 64 96 1.2E-15 T 22-04-2016 SAMA_RS07400 18cf500d6c5333ae904830cd5f315f81 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 262 5.6E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 8.5E-88 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 PANTHER PTHR10108:SF910 6 232 1.4E-131 T 22-04-2016 SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 Pfam PF13489 Methyltransferase domain 52 198 6.8E-25 T 22-04-2016 SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 PANTHER PTHR10108 6 232 1.4E-131 T 22-04-2016 SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 Gene3D G3DSA:3.40.50.150 22 219 6.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 SUPERFAMILY SSF53335 15 230 4.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS09020 65da4bc7f1b15f83ac0421e577080197 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.489 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 PANTHER PTHR11986:SF74 1 460 1.3E-225 T 22-04-2016 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 Gene3D G3DSA:3.90.1150.10 349 453 1.1E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 Gene3D G3DSA:3.90.1150.10 22 93 1.1E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 Gene3D G3DSA:3.40.640.10 95 343 5.5E-44 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 PANTHER PTHR11986 1 460 1.3E-225 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 Pfam PF00202 Aminotransferase class-III 49 433 1.2E-39 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SAMA_RS07710 cd6e8772f1755278ec714b482384b48b 463 SUPERFAMILY SSF53383 44 453 5.21E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS09505 7a7d57a78cf0b352e4856f903909ce40 95 PANTHER PTHR38769 6 95 1.2E-13 T 22-04-2016 SAMA_RS09505 7a7d57a78cf0b352e4856f903909ce40 95 Pfam PF04175 Protein of unknown function (DUF406) 12 92 6.7E-13 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 SAMA_RS09505 7a7d57a78cf0b352e4856f903909ce40 95 Gene3D G3DSA:3.30.70.860 45 92 3.4E-5 T 22-04-2016 SAMA_RS10325 d60f84d98f9f304862f53ca6ffcde350 159 Pfam PF03061 Thioesterase superfamily 22 97 1.8E-18 T 22-04-2016 IPR006683 Thioesterase domain SAMA_RS10325 d60f84d98f9f304862f53ca6ffcde350 159 PANTHER PTHR11049 5 155 2.3E-61 T 22-04-2016 SAMA_RS10325 d60f84d98f9f304862f53ca6ffcde350 159 Gene3D G3DSA:3.10.129.10 4 140 1.5E-45 T 22-04-2016 IPR029069 HotDog domain SAMA_RS10325 d60f84d98f9f304862f53ca6ffcde350 159 SUPERFAMILY SSF54637 5 150 6.04E-44 T 22-04-2016 IPR029069 HotDog domain SAMA_RS06600 73242eab31af4ec122f55d92105521ee 169 SMART SM00267 1 165 0.0012 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06600 73242eab31af4ec122f55d92105521ee 169 Gene3D G3DSA:3.30.70.270 11 161 3.0E-13 T 22-04-2016 SAMA_RS06600 73242eab31af4ec122f55d92105521ee 169 Pfam PF00990 Diguanylate cyclase, GGDEF domain 70 155 4.5E-5 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS06600 73242eab31af4ec122f55d92105521ee 169 SUPERFAMILY SSF55073 15 146 4.24E-11 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 Gene3D G3DSA:1.20.210.10 14 467 2.1E-72 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 466 1.2E-229 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 445 1.0E-115 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 PANTHER PTHR10422:SF21 11 467 3.7E-303 T 22-04-2016 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 PANTHER PTHR10422 11 467 3.7E-303 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 SUPERFAMILY SSF81442 12 466 1.83E-123 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS09340 453e31bb671ca5ee7935b2b772f4fbaf 478 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 206 261 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SAMA_RS02630 6c57563a1415fa6ec82659c677b8ed74 615 Pfam PF01435 Peptidase family M48 145 335 2.4E-14 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SAMA_RS02630 6c57563a1415fa6ec82659c677b8ed74 615 Gene3D G3DSA:3.30.2010.10 100 185 5.7E-11 T 22-04-2016 SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 PANTHER PTHR30093 4 69 5.8E-16 T 22-04-2016 SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 SUPERFAMILY SSF54523 8 70 4.71E-12 T 22-04-2016 SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 PANTHER PTHR30093:SF10 4 69 5.8E-16 T 22-04-2016 SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 Gene3D G3DSA:3.30.700.10 8 55 5.5E-8 T 22-04-2016 SAMA_RS02470 ef23a05970f59f697a8385be7c9eb850 201 Pfam PF13633 Prokaryotic N-terminal methylation site 5 29 9.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS00905 9995bdd4a68ee998d4cd6b6ecda475d4 251 Pfam PF01203 Type II secretion system (T2SS), protein N 34 242 3.3E-54 T 22-04-2016 IPR022792 Type II secretion system, protein N SAMA_RS00905 9995bdd4a68ee998d4cd6b6ecda475d4 251 ProSitePatterns PS01142 Bacterial type II secretion system protein N signature. 42 64 - T 22-04-2016 IPR000645 Type II secretion system protein N, conserved site GO:0008565|GO:0015627|GO:0015628 SAMA_RS13895 32cd22a938be8bf941b3c1b79f485eb1 242 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 6 242 1.8E-63 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS13895 32cd22a938be8bf941b3c1b79f485eb1 242 SUPERFAMILY SSF56935 36 181 2.44E-6 T 22-04-2016 SAMA_RS13895 32cd22a938be8bf941b3c1b79f485eb1 242 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 31 222 5.2E-31 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS11775 4b7f4d2d0a63a02d0119c77f9e4f732d 188 PANTHER PTHR30576 1 178 9.0E-63 T 22-04-2016 SAMA_RS11775 4b7f4d2d0a63a02d0119c77f9e4f732d 188 Pfam PF02397 Bacterial sugar transferase 7 182 4.0E-54 T 22-04-2016 IPR003362 Bacterial sugar transferase SAMA_RS02730 eb714ae0db6933d125a542fb65968418 321 Pfam PF03741 Integral membrane protein TerC family 81 283 9.2E-55 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SAMA_RS02730 eb714ae0db6933d125a542fb65968418 321 PANTHER PTHR30238 7 316 1.5E-144 T 22-04-2016 SAMA_RS02730 eb714ae0db6933d125a542fb65968418 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 314 4.3E-120 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SAMA_RS02730 eb714ae0db6933d125a542fb65968418 321 PANTHER PTHR30238:SF0 7 316 1.5E-144 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 PANTHER PTHR33993:SF2 1 253 6.2E-95 T 22-04-2016 SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 PANTHER PTHR33993 1 253 6.2E-95 T 22-04-2016 SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 122 2.4E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 SUPERFAMILY SSF54593 12 169 1.11E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 SUPERFAMILY SSF54593 141 253 2.01E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 Gene3D G3DSA:3.10.180.10 141 254 6.2E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS18080 98fcb480206c73345ad3008d4c0ce633 258 Gene3D G3DSA:3.10.180.10 10 129 1.3E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS12975 7f37b6eacf8c7c4fb8a5459365fa4c2c 270 Pfam PF11101 Protein of unknown function (DUF2884) 34 260 3.6E-73 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 SAMA_RS06725 474353c167b86da64540b5bcb46a39b7 115 Gene3D G3DSA:1.10.1220.10 65 99 1.4E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SAMA_RS06725 474353c167b86da64540b5bcb46a39b7 115 Pfam PF01402 Ribbon-helix-helix protein, copG family 63 99 1.4E-4 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SAMA_RS06725 474353c167b86da64540b5bcb46a39b7 115 SUPERFAMILY SSF47598 63 99 6.67E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 PIRSF PIRSF011396 1 504 2.3E-143 T 22-04-2016 IPR006905 Tryptophan halogenase SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 SUPERFAMILY SSF51905 323 409 1.85E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 SUPERFAMILY SSF51905 138 235 1.85E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 SUPERFAMILY SSF51905 2 89 1.85E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 Gene3D G3DSA:3.50.50.60 2 74 1.8E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 Gene3D G3DSA:3.50.50.60 153 233 1.8E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 Gene3D G3DSA:3.50.50.60 318 362 1.8E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04900 a398232cddb5fead983c36aeed0385b1 507 Pfam PF04820 Tryptophan halogenase 5 458 8.7E-131 T 22-04-2016 IPR006905 Tryptophan halogenase SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PIRSF PIRSF002764 5 228 1.9E-86 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PANTHER PTHR30070 8 228 8.7E-75 T 22-04-2016 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 14 224 2.6E-91 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 Pfam PF03379 CcmB protein 13 225 3.7E-94 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PANTHER PTHR30070:SF1 8 228 8.7E-75 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 201 224 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 109 127 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 164 183 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 61 78 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 35 56 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS01275 38b26ce2be0b6f7e011cd54f653332d4 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 84 107 3.8E-71 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 PANTHER PTHR38471 1 118 2.1E-44 T 22-04-2016 SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 PANTHER PTHR38471:SF1 1 118 2.1E-44 T 22-04-2016 SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 PIRSF PIRSF035652 1 121 2.8E-48 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 115 1.5E-30 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 Pfam PF05635 23S rRNA-intervening sequence protein 6 109 1.2E-26 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 SUPERFAMILY SSF158446 5 113 5.36E-32 T 22-04-2016 SAMA_RS11745 b36cffb74ee9f1dd7b512a5e150f6541 121 Gene3D G3DSA:1.20.1440.60 5 117 1.8E-38 T 22-04-2016 IPR012657 23S rRNA-intervening sequence protein SAMA_RS03920 28822c5f5264e5690038f7d7019a7768 297 PANTHER PTHR12715 17 297 3.0E-17 T 22-04-2016 SAMA_RS03920 28822c5f5264e5690038f7d7019a7768 297 SUPERFAMILY SSF103481 217 295 2.22E-6 T 22-04-2016 SAMA_RS03920 28822c5f5264e5690038f7d7019a7768 297 Pfam PF00892 EamA-like transporter family 154 293 8.6E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 SMART SM00882 8 219 2.9E-88 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 3.4E-78 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 SUPERFAMILY SSF100950 6 227 5.02E-88 T 22-04-2016 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 Gene3D G3DSA:3.40.1080.10 6 218 4.0E-100 T 22-04-2016 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 PANTHER PTHR13707 1 233 4.1E-136 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS07080 e529660c7dd58ee66cdd279a89502446 233 Pfam PF01144 Coenzyme A transferase 9 218 3.0E-77 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS04255 689acb6bd5401a76d1a464e312fe0a91 149 SUPERFAMILY SSF54427 12 141 3.24E-22 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS04255 689acb6bd5401a76d1a464e312fe0a91 149 Gene3D G3DSA:3.10.450.50 17 132 4.9E-14 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS04255 689acb6bd5401a76d1a464e312fe0a91 149 Pfam PF12680 SnoaL-like domain 19 108 5.6E-12 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SAMA_RS04185 78320db1a60902d3a66a6d6e6e5a6fcc 170 PANTHER PTHR36115 2 169 3.7E-61 T 22-04-2016 SAMA_RS04185 78320db1a60902d3a66a6d6e6e5a6fcc 170 PANTHER PTHR36115:SF2 2 169 3.7E-61 T 22-04-2016 SAMA_RS04185 78320db1a60902d3a66a6d6e6e5a6fcc 170 Pfam PF06271 RDD family 12 149 2.9E-18 T 22-04-2016 IPR010432 RDD SAMA_RS16930 2e8458551173f65124a78526029691fb 110 Hamap MF_00142 Protein CyaY [cyaY]. 3 110 26.098 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 Gene3D G3DSA:3.30.920.10 2 108 3.1E-32 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 108 3.9E-37 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 SUPERFAMILY SSF55387 2 107 4.53E-36 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 SMART SM01219 3 109 1.2E-48 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 PANTHER PTHR16821 3 108 3.2E-31 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS16930 2e8458551173f65124a78526029691fb 110 ProSitePatterns PS01344 Frataxin family signature. 54 68 - T 22-04-2016 IPR020895 Frataxin conserved site SAMA_RS16930 2e8458551173f65124a78526029691fb 110 Pfam PF01491 Frataxin-like domain 3 105 5.9E-29 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 Pfam PF13407 Periplasmic binding protein domain 54 299 8.1E-19 T 22-04-2016 IPR025997 Periplasmic binding protein SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 PANTHER PTHR30146 1 244 7.6E-15 T 22-04-2016 SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 Gene3D G3DSA:3.40.50.2300 170 305 1.1E-13 T 22-04-2016 SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 PANTHER PTHR30146:SF60 1 244 7.6E-15 T 22-04-2016 SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 SUPERFAMILY SSF53822 49 319 4.24E-27 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SAMA_RS02275 ece849469c754869a6c8dfd7e5f890f3 361 Gene3D G3DSA:3.40.50.2300 50 169 1.7E-13 T 22-04-2016 SAMA_RS12840 e8d1ab8b2b59ff5c827f968c635947a3 194 SUPERFAMILY SSF55729 6 163 4.8E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS12840 e8d1ab8b2b59ff5c827f968c635947a3 194 Pfam PF00583 Acetyltransferase (GNAT) family 86 151 4.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS12840 e8d1ab8b2b59ff5c827f968c635947a3 194 Gene3D G3DSA:3.40.630.30 8 167 1.5E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS17420 71c2028a90cd0ebeaff3ff6bb8b408f1 182 PANTHER PTHR33741 15 182 4.7E-44 T 22-04-2016 SAMA_RS17420 71c2028a90cd0ebeaff3ff6bb8b408f1 182 PANTHER PTHR33741:SF1 15 182 4.7E-44 T 22-04-2016 SAMA_RS17420 71c2028a90cd0ebeaff3ff6bb8b408f1 182 Pfam PF04982 HPP family 54 178 1.0E-41 T 22-04-2016 IPR007065 HPP SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457 229 326 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457 3 44 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457 60 206 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457:SF1 229 326 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457:SF1 3 44 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 PANTHER PTHR35457:SF1 60 206 4.0E-62 T 22-04-2016 SAMA_RS18150 b4fa21cb5d6aca229aae0574ca156537 327 Pfam PF02628 Cytochrome oxidase assembly protein 5 317 4.6E-84 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SAMA_RS12560 a2111cad8a08daa214210b4474ea2688 351 SUPERFAMILY SSF56935 20 351 3.97E-53 T 22-04-2016 SAMA_RS12560 a2111cad8a08daa214210b4474ea2688 351 Gene3D G3DSA:2.40.160.10 20 351 3.0E-50 T 22-04-2016 IPR023614 Porin domain SAMA_RS12560 a2111cad8a08daa214210b4474ea2688 351 Pfam PF13609 Gram-negative porin 11 333 1.4E-38 T 22-04-2016 SAMA_RS01655 1e34f6fb299b340567acbcb4c5efedfb 253 SUPERFAMILY SSF56300 148 232 4.36E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS01655 1e34f6fb299b340567acbcb4c5efedfb 253 SUPERFAMILY SSF56300 2 109 4.36E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS01655 1e34f6fb299b340567acbcb4c5efedfb 253 Pfam PF00149 Calcineurin-like phosphoesterase 3 214 8.0E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS01655 1e34f6fb299b340567acbcb4c5efedfb 253 PANTHER PTHR37844 1 235 3.5E-26 T 22-04-2016 SAMA_RS01655 1e34f6fb299b340567acbcb4c5efedfb 253 Gene3D G3DSA:3.60.21.10 18 223 1.6E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 PANTHER PTHR22573 1 175 6.2E-76 T 22-04-2016 SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 SUPERFAMILY SSF53271 3 175 1.27E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 6.1E-69 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 Gene3D G3DSA:3.40.50.2020 2 174 3.1E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 Pfam PF00156 Phosphoribosyl transferase domain 13 159 4.1E-22 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SAMA_RS04050 cd5d209cb078923b5a559698ac48f18d 176 PANTHER PTHR22573:SF56 1 175 6.2E-76 T 22-04-2016 SAMA_RS07605 a0c73b0518606a071c9a99ea13eb1580 207 PANTHER PTHR12907 1 199 7.2E-68 T 22-04-2016 SAMA_RS07605 a0c73b0518606a071c9a99ea13eb1580 207 PANTHER PTHR12907:SF14 1 199 7.2E-68 T 22-04-2016 SAMA_RS07605 a0c73b0518606a071c9a99ea13eb1580 207 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 110 199 1.2E-18 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SAMA_RS07605 a0c73b0518606a071c9a99ea13eb1580 207 SMART SM00702 20 199 1.6E-20 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 Gene3D G3DSA:3.40.190.10 93 172 2.5E-16 T 22-04-2016 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 SUPERFAMILY SSF53850 92 287 1.99E-29 T 22-04-2016 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 Gene3D G3DSA:1.10.10.10 6 88 6.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 SUPERFAMILY SSF46785 6 90 4.54E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 Gene3D G3DSA:3.40.190.10 173 271 1.8E-15 T 22-04-2016 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 PANTHER PTHR30346 5 298 1.1E-200 T 22-04-2016 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 Pfam PF03466 LysR substrate binding domain 93 289 1.8E-33 T 22-04-2016 IPR005119 LysR, substrate-binding SAMA_RS04500 7a0ec6d8ce19178da15c27dc8ae9fd0a 305 PANTHER PTHR30346:SF10 5 298 1.1E-200 T 22-04-2016 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 PANTHER PTHR32060 133 323 7.9E-12 T 22-04-2016 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 PANTHER PTHR32060 352 404 7.9E-12 T 22-04-2016 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 Pfam PF03572 Peptidase family S41 255 404 1.7E-15 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 SUPERFAMILY SSF50156 141 234 6.03E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 SUPERFAMILY SSF52096 249 336 5.8E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 SUPERFAMILY SSF52096 109 168 5.8E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 SUPERFAMILY SSF52096 363 441 5.8E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 Gene3D G3DSA:2.30.42.10 161 228 2.0E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SAMA_RS09135 9d616b3cdc96411f158b03bf108a7db5 530 Gene3D G3DSA:3.90.226.10 229 478 1.9E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS04460 4e5fcfbd9fd51c3ef883becb840a42a5 207 PANTHER PTHR30506:SF3 1 207 1.1E-90 T 22-04-2016 SAMA_RS04460 4e5fcfbd9fd51c3ef883becb840a42a5 207 PANTHER PTHR30506 1 207 1.1E-90 T 22-04-2016 SAMA_RS04460 4e5fcfbd9fd51c3ef883becb840a42a5 207 Pfam PF03458 UPF0126 domain 93 164 2.2E-23 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SAMA_RS04460 4e5fcfbd9fd51c3ef883becb840a42a5 207 Pfam PF03458 UPF0126 domain 6 79 1.4E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 Gene3D G3DSA:3.40.80.10 4 180 4.8E-67 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 PANTHER PTHR30417 5 180 5.6E-79 T 22-04-2016 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 SUPERFAMILY SSF55846 3 179 2.49E-64 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 SMART SM00644 16 166 1.2E-48 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 167 1.4E-18 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SAMA_RS02025 4b369027b7e8c8b9ff713b84fc666e4e 184 PANTHER PTHR30417:SF4 5 180 5.6E-79 T 22-04-2016 SAMA_RS14255 b450153e4385576b9137cb7bcdd86fb3 191 PANTHER PTHR37528 1 191 8.0E-39 T 22-04-2016 SAMA_RS14255 b450153e4385576b9137cb7bcdd86fb3 191 SUPERFAMILY SSF101327 8 175 3.53E-46 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 SAMA_RS14255 b450153e4385576b9137cb7bcdd86fb3 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 176 2.2E-33 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 SAMA_RS16100 36f52c622e4db395d38f3b5c116d4b15 184 Gene3D G3DSA:2.60.450.10 27 159 1.1E-27 T 22-04-2016 SAMA_RS16100 36f52c622e4db395d38f3b5c116d4b15 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 163 19.964 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SAMA_RS16100 36f52c622e4db395d38f3b5c116d4b15 184 Pfam PF03968 OstA-like protein 32 142 4.6E-24 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SAMA_RS16100 36f52c622e4db395d38f3b5c116d4b15 184 PANTHER PTHR36504 1 181 1.5E-29 T 22-04-2016 SAMA_RS16100 36f52c622e4db395d38f3b5c116d4b15 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 163 1.1E-36 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SAMA_RS15195 ad650fd5c08db679ac9d88832007d1c9 363 Gene3D G3DSA:1.10.575.10 68 196 6.0E-12 T 22-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 SAMA_RS15195 ad650fd5c08db679ac9d88832007d1c9 363 SUPERFAMILY SSF48537 59 285 3.14E-29 T 22-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 SAMA_RS04360 e61109eb96fc7892956185583e9ea9b6 271 SUPERFAMILY SSF53335 4 260 4.67E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS04360 e61109eb96fc7892956185583e9ea9b6 271 PIRSF PIRSF018249 1 271 2.2E-42 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 SAMA_RS04360 e61109eb96fc7892956185583e9ea9b6 271 Gene3D G3DSA:3.40.50.150 133 194 2.1E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 67 538 1.8E-189 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 44 540 55.983 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 PANTHER PTHR30504:SF2 15 539 7.4E-300 T 22-04-2016 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 SUPERFAMILY SSF74650 67 435 2.07E-160 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 PANTHER PTHR30504 15 539 7.4E-300 T 22-04-2016 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 Gene3D G3DSA:2.70.98.10 66 435 3.3E-165 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 Gene3D G3DSA:2.60.40.10 448 539 1.1E-18 T 22-04-2016 IPR013783 Immunoglobulin-like fold SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 SUPERFAMILY SSF81296 444 539 5.74E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set SAMA_RS08825 9b4ac65b0492528b9c9fc7d3ba467bb4 540 PIRSF PIRSF006281 23 540 2.7E-203 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 SAMA_RS16425 aff9e77f012801395d8a08e13fbf71bd 286 Pfam PF01963 TraB family 19 272 2.7E-47 T 22-04-2016 IPR002816 Pheromone shutdown, TraB SAMA_RS16425 aff9e77f012801395d8a08e13fbf71bd 286 PANTHER PTHR40590 25 284 6.6E-34 T 22-04-2016 SAMA_RS00220 2d9627e620d9cf66d0497e08de5890fb 159 PANTHER PTHR38692:SF1 1 158 3.1E-73 T 22-04-2016 SAMA_RS00220 2d9627e620d9cf66d0497e08de5890fb 159 Hamap MF_00598 Protein Smg [smg]. 1 158 31.454 T 22-04-2016 IPR007456 Smg SAMA_RS00220 2d9627e620d9cf66d0497e08de5890fb 159 PANTHER PTHR38692 1 158 3.1E-73 T 22-04-2016 SAMA_RS00220 2d9627e620d9cf66d0497e08de5890fb 159 Pfam PF04361 Protein of unknown function (DUF494) 1 158 1.9E-59 T 22-04-2016 IPR007456 Smg SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 Pfam PF04203 Sortase family 51 164 4.2E-25 T 22-04-2016 IPR005754 Sortase family SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 Gene3D G3DSA:2.40.260.10 53 163 1.7E-15 T 22-04-2016 IPR023365 Sortase domain SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 SUPERFAMILY SSF63817 31 167 7.72E-26 T 22-04-2016 IPR023365 Sortase domain SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 1 162 1.0E-59 T 22-04-2016 IPR022445 Sortase, proteobacterial type SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 TIGRFAM TIGR01076 sortase_fam: sortase 55 154 2.2E-15 T 22-04-2016 IPR005754 Sortase family SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 PANTHER PTHR33393:SF5 26 164 9.1E-24 T 22-04-2016 SAMA_RS10450 4d507778fda9407359711b5072a62fb9 183 PANTHER PTHR33393 26 164 9.1E-24 T 22-04-2016 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 PRINTS PR00834 HtrA/DegQ protease family signature 308 325 9.9E-5 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 PRINTS PR00834 HtrA/DegQ protease family signature 330 347 9.9E-5 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 PRINTS PR00834 HtrA/DegQ protease family signature 213 225 9.9E-5 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 PRINTS PR00834 HtrA/DegQ protease family signature 233 253 9.9E-5 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 Gene3D G3DSA:2.40.10.10 274 373 3.6E-16 T 22-04-2016 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 Gene3D G3DSA:2.40.10.10 197 273 6.0E-10 T 22-04-2016 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 SUPERFAMILY SSF50494 183 373 5.72E-30 T 22-04-2016 IPR009003 Peptidase S1, PA clan SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 Pfam PF13365 Trypsin-like peptidase domain 204 337 3.2E-17 T 22-04-2016 SAMA_RS17695 e210d834f4f04523e162918413c8eee2 406 PANTHER PTHR22939 196 371 8.0E-16 T 22-04-2016 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 SMART SM00304 181 233 0.0068 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 Pfam PF00672 HAMP domain 164 226 3.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 Gene3D G3DSA:1.10.287.130 236 290 2.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 426 1.3E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 PANTHER PTHR24423 175 421 4.8E-40 T 22-04-2016 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 PANTHER PTHR24423 1 11 4.8E-40 T 22-04-2016 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 Gene3D G3DSA:3.30.565.10 304 428 1.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 SMART SM00387 338 445 3.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 PANTHER PTHR24423:SF496 175 421 4.8E-40 T 22-04-2016 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 PANTHER PTHR24423:SF496 1 11 4.8E-40 T 22-04-2016 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 SUPERFAMILY SSF47384 217 291 7.26E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SAMA_RS15685 d0bb4e01cad678f917eb69b7b3c58d13 445 SUPERFAMILY SSF55874 306 430 3.8E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS15690 0a8bc14c0fb1f75b2f88a57d8bd1f962 265 SMART SM01150 5 263 1.1E-114 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 SAMA_RS15690 0a8bc14c0fb1f75b2f88a57d8bd1f962 265 PANTHER PTHR31136:SF2 1 263 8.7E-122 T 22-04-2016 SAMA_RS15690 0a8bc14c0fb1f75b2f88a57d8bd1f962 265 Pfam PF07063 Domain of unknown function (DUF1338) 8 262 1.8E-41 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 SAMA_RS15690 0a8bc14c0fb1f75b2f88a57d8bd1f962 265 PANTHER PTHR31136 1 263 8.7E-122 T 22-04-2016 SAMA_RS04835 07f929fc1663a884b0bf8fe158004c2e 139 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 71 1.1E-7 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SAMA_RS04835 07f929fc1663a884b0bf8fe158004c2e 139 SUPERFAMILY SSF54534 7 137 1.61E-28 T 22-04-2016 SAMA_RS04835 07f929fc1663a884b0bf8fe158004c2e 139 Gene3D G3DSA:3.10.50.40 5 75 5.9E-13 T 22-04-2016 SAMA_RS04835 07f929fc1663a884b0bf8fe158004c2e 139 Gene3D G3DSA:3.10.50.40 125 137 5.9E-13 T 22-04-2016 SAMA_RS07655 abbb90483a077409a5ca2030144954a7 400 PANTHER PTHR32347 75 397 2.3E-26 T 22-04-2016 SAMA_RS07655 abbb90483a077409a5ca2030144954a7 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 174 301 8.3E-8 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS16590 e6a0b3b78889cdb03dde68d2b241b482 162 SUPERFAMILY SSF51182 25 133 5.94E-25 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS16590 e6a0b3b78889cdb03dde68d2b241b482 162 Gene3D G3DSA:2.60.120.10 28 157 8.5E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS16590 e6a0b3b78889cdb03dde68d2b241b482 162 PANTHER PTHR35848 32 129 5.4E-28 T 22-04-2016 SAMA_RS16590 e6a0b3b78889cdb03dde68d2b241b482 162 Pfam PF07883 Cupin domain 42 113 1.2E-15 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SAMA_RS16590 e6a0b3b78889cdb03dde68d2b241b482 162 PANTHER PTHR35848:SF1 32 129 5.4E-28 T 22-04-2016 SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 PANTHER PTHR13932:SF5 1 435 5.1E-158 T 22-04-2016 SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 SMART SM00729 59 271 3.7E-29 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 Gene3D G3DSA:3.80.30.20 59 253 1.4E-22 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 SUPERFAMILY SSF102114 51 425 1.51E-64 T 22-04-2016 SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 Pfam PF04055 Radical SAM superfamily 65 229 3.9E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SAMA_RS18725 2c3b7eab910890f983597e8da0f0d93b 444 PANTHER PTHR13932 1 435 5.1E-158 T 22-04-2016 SAMA_RS15560 8338b1fa6aeb2ee6541cec7516378093 89 Pfam PF03927 NapD protein 5 79 4.5E-28 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SAMA_RS15560 8338b1fa6aeb2ee6541cec7516378093 89 PANTHER PTHR38603 1 83 1.2E-23 T 22-04-2016 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 Gene3D G3DSA:1.10.10.10 8 148 2.2E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 PANTHER PTHR33164:SF5 6 148 5.1E-59 T 22-04-2016 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 SMART SM00347 34 132 2.2E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 Pfam PF01047 MarR family 41 98 1.3E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 PANTHER PTHR33164 6 148 5.1E-59 T 22-04-2016 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 8.4E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 8.4E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 8.4E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS03335 875d8ab4505a163fc6895ab814ef783a 150 SUPERFAMILY SSF46785 7 147 1.4E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS09395 2b7dfce63d08d07e62402b6da4f2ac53 158 Pfam PF11205 Protein of unknown function (DUF2987) 3 108 4.0E-35 T 22-04-2016 IPR021370 Protein of unknown function DUF2987 SAMA_RS08020 a7f6d49752c691333f7ce8c0f674cb51 101 Pfam PF11333 Protein of unknown function (DUF3135) 4 81 6.4E-27 T 22-04-2016 IPR021482 Protein of unknown function DUF3135 SAMA_RS05790 26d217dab440007424e9a253e83a0098 151 PANTHER PTHR23091:SF36 11 151 5.0E-27 T 22-04-2016 SAMA_RS05790 26d217dab440007424e9a253e83a0098 151 SUPERFAMILY SSF55729 1 150 1.27E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05790 26d217dab440007424e9a253e83a0098 151 Gene3D G3DSA:3.40.630.30 11 151 4.5E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS05790 26d217dab440007424e9a253e83a0098 151 Pfam PF00583 Acetyltransferase (GNAT) family 52 130 8.4E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS05790 26d217dab440007424e9a253e83a0098 151 PANTHER PTHR23091 11 151 5.0E-27 T 22-04-2016 SAMA_RS16925 1c03e45b7507a2bdfbdeb1b92ae4532d 79 Pfam PF13627 Prokaryotic lipoprotein-attachment site 31 50 2.4E-6 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 SUPERFAMILY SSF56276 1 303 1.2E-96 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 Gene3D G3DSA:3.60.90.10 2 298 2.8E-78 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 Pfam PF01536 Adenosylmethionine decarboxylase 2 299 3.7E-58 T 22-04-2016 IPR001985 S-adenosylmethionine decarboxylase GO:0004014|GO:0006597|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 PANTHER PTHR11570:SF7 1 261 9.1E-83 T 22-04-2016 SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 ProSitePatterns PS01336 S-adenosylmethionine decarboxylase signature. 51 61 - T 22-04-2016 IPR018166 S-adenosylmethionine decarboxylase, conserved site GO:0004014 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SAMA_RS10255 1bec12ae771f54a3aa08f31a51461c8e 309 PANTHER PTHR11570 1 261 9.1E-83 T 22-04-2016 IPR001985 S-adenosylmethionine decarboxylase GO:0004014|GO:0006597|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 Gene3D G3DSA:3.40.50.980 190 340 7.8E-26 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 PANTHER PTHR24095 353 483 4.2E-58 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 PANTHER PTHR24095 43 337 4.2E-58 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 Pfam PF00501 AMP-binding enzyme 41 447 1.3E-58 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 Gene3D G3DSA:2.30.38.10 357 444 1.7E-15 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 PANTHER PTHR24095:SF123 353 483 4.2E-58 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 PANTHER PTHR24095:SF123 43 337 4.2E-58 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 Gene3D G3DSA:3.40.50.980 9 189 1.2E-24 T 22-04-2016 SAMA_RS06205 889ee0209c4fd479e7593d40df6901e7 564 SUPERFAMILY SSF56801 6 557 2.35E-80 T 22-04-2016 SAMA_RS12215 d07655b47703c7f01b3deb744227a09f 165 SUPERFAMILY SSF55729 3 138 2.2E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS12215 d07655b47703c7f01b3deb744227a09f 165 Gene3D G3DSA:3.40.630.30 3 138 7.5E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS12215 d07655b47703c7f01b3deb744227a09f 165 Pfam PF13302 Acetyltransferase (GNAT) domain 3 133 8.6E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS16505 03d5d61537212a4a36331bc93ae79f04 184 Gene3D G3DSA:3.30.530.20 28 179 4.9E-4 T 22-04-2016 IPR023393 START-like domain SAMA_RS16505 03d5d61537212a4a36331bc93ae79f04 184 SUPERFAMILY SSF55961 27 177 1.73E-17 T 22-04-2016 SAMA_RS16505 03d5d61537212a4a36331bc93ae79f04 184 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 27 176 3.1E-12 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase SAMA_RS10055 a8cccb506652d98b8cfa10cb05c5bd48 423 Pfam PF04285 Protein of unknown function (DUF444) 4 421 1.9E-185 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 SAMA_RS10055 a8cccb506652d98b8cfa10cb05c5bd48 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 39.747 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 SAMA_RS10055 a8cccb506652d98b8cfa10cb05c5bd48 423 PANTHER PTHR30510 1 421 7.8E-186 T 22-04-2016 SAMA_RS00015 f10cfa79370cb3149538ac8c77730296 281 SUPERFAMILY SSF53474 3 278 9.73E-94 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00015 f10cfa79370cb3149538ac8c77730296 281 Gene3D G3DSA:3.40.50.1820 2 277 3.2E-80 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00015 f10cfa79370cb3149538ac8c77730296 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 276 3.0E-123 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SAMA_RS00015 f10cfa79370cb3149538ac8c77730296 281 PANTHER PTHR10061 2 281 2.9E-170 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SAMA_RS00015 f10cfa79370cb3149538ac8c77730296 281 Pfam PF00756 Putative esterase 23 272 1.4E-66 T 22-04-2016 IPR000801 Putative esterase SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 5.8E-17 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 PANTHER PTHR33154 1 69 8.0E-26 T 22-04-2016 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.4E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.4E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 3.4E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.4E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 SUPERFAMILY SSF46785 1 98 8.24E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 Gene3D G3DSA:1.10.10.10 2 87 8.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS02645 bc6161fa7ab9f23df54b73da6907b8e6 111 SMART SM00418 5 88 2.2E-30 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 PANTHER PTHR38037 23 171 1.6E-18 T 22-04-2016 SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 Pfam PF05618 Putative ATP-dependant zinc protease 32 158 3.3E-18 T 22-04-2016 SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 Gene3D G3DSA:2.40.70.10 154 287 2.1E-32 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 Gene3D G3DSA:2.40.70.10 20 152 5.4E-32 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 SUPERFAMILY SSF50630 157 288 1.29E-29 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS10225 f5204a70ccaad2688bf63c3cf2f650c7 289 SUPERFAMILY SSF50630 31 158 4.96E-29 T 22-04-2016 IPR021109 Aspartic peptidase domain SAMA_RS02585 506771d71d80e12928e6b9c9fcb6a053 447 PANTHER PTHR30624:SF1 5 447 1.0E-177 T 22-04-2016 SAMA_RS02585 506771d71d80e12928e6b9c9fcb6a053 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 3.2E-54 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS02585 506771d71d80e12928e6b9c9fcb6a053 447 PANTHER PTHR30624 5 447 1.0E-177 T 22-04-2016 SAMA_RS02585 506771d71d80e12928e6b9c9fcb6a053 447 SUPERFAMILY SSF111283 13 447 3.66E-126 T 22-04-2016 SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 1.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 Gene3D G3DSA:3.30.700.10 7 89 6.9E-8 T 22-04-2016 SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 SUPERFAMILY SSF54523 7 94 1.8E-14 T 22-04-2016 SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 PANTHER PTHR30093:SF7 1 59 2.1E-28 T 22-04-2016 SAMA_RS02475 fc882d0238c55159098d1e0aac72f422 172 PANTHER PTHR30093 1 59 2.1E-28 T 22-04-2016 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.3E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PANTHER PTHR11958:SF44 3 405 7.2E-126 T 22-04-2016 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 Pfam PF00375 Sodium:dicarboxylate symporter family 5 402 6.2E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 PANTHER PTHR11958 3 405 7.2E-126 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 SUPERFAMILY SSF118215 5 403 1.27E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS03165 fa2e58695c2775ad000c9d6e7f92fc25 414 Gene3D G3DSA:1.10.3860.10 3 405 6.9E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 8.1E-85 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 38.689 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 SUPERFAMILY SSF53335 19 249 7.43E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 PANTHER PTHR10108:SF864 1 251 3.2E-175 T 22-04-2016 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 250 3.4E-100 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 PANTHER PTHR10108 1 251 3.2E-175 T 22-04-2016 SAMA_RS16680 471bb901ab44173a7edd459df5eda92e 251 Gene3D G3DSA:3.40.50.150 25 247 4.7E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 PIRSF PIRSF025550 5 169 1.9E-55 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 SUPERFAMILY SSF55718 50 140 1.44E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 Pfam PF02036 SCP-2 sterol transfer family 43 135 6.7E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 Gene3D G3DSA:3.30.1050.10 73 135 1.6E-9 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 PANTHER PTHR10094 6 147 3.3E-46 T 22-04-2016 SAMA_RS05215 895feb8b530febeec88a00cd53670304 170 PANTHER PTHR10094:SF16 6 147 3.3E-46 T 22-04-2016 SAMA_RS07025 07151f254e22f5319946c1a95ac821f2 172 Pfam PF14317 YcxB-like protein 107 169 1.0E-11 T 22-04-2016 IPR025588 YcxB-like protein SAMA_RS16665 4d4769bb8611c878c1f3c90622497776 82 Pfam PF10688 Bacterial inner membrane protein 6 75 6.1E-7 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV SAMA_RS16665 4d4769bb8611c878c1f3c90622497776 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 68 2.0E-31 T 22-04-2016 IPR020137 Uncharacterised protein family HI1736 SAMA_RS13710 ab0aa0519554fa3272be9a8bf1402f95 133 Pfam PF14567 SMI1-KNR4 cell-wall 1 130 3.9E-46 T 22-04-2016 SAMA_RS13710 ab0aa0519554fa3272be9a8bf1402f95 133 Gene3D G3DSA:3.40.1580.10 1 133 4.3E-60 T 22-04-2016 IPR018958 SMI1/KNR4-like domain SAMA_RS13710 ab0aa0519554fa3272be9a8bf1402f95 133 SUPERFAMILY SSF160631 1 132 8.24E-44 T 22-04-2016 SAMA_RS13710 ab0aa0519554fa3272be9a8bf1402f95 133 SMART SM00860 21 128 2.3E-4 T 22-04-2016 IPR018958 SMI1/KNR4-like domain SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 PANTHER PTHR13420 11 95 5.5E-23 T 22-04-2016 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 SMART SM01152 7 83 1.7E-39 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 SUPERFAMILY SSF69786 2 95 1.18E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 Gene3D G3DSA:3.30.1200.10 3 88 7.4E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 82 7.8E-27 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 84 9.7E-25 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 SAMA_RS12945 61a156aa217b9cecd679c6f7da5221ae 95 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.668 T 22-04-2016 IPR003746 Protein of unknown function DUF167 SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 PANTHER PTHR23407:SF1 2 194 6.3E-54 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 185 1.0E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 SUPERFAMILY SSF100950 6 191 6.56E-55 T 22-04-2016 SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 PIRSF PIRSF006806 3 188 1.8E-35 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 185 9.5E-49 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 PANTHER PTHR23407 2 194 6.3E-54 T 22-04-2016 SAMA_RS14265 2bd288727f2bba0833b4919089354abd 195 Gene3D G3DSA:3.40.50.10420 7 190 5.4E-56 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 Pfam PF01722 BolA-like protein 19 74 1.3E-13 T 22-04-2016 IPR002634 BolA protein SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 PANTHER PTHR12735:SF24 5 83 2.4E-26 T 22-04-2016 SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 Gene3D G3DSA:3.30.300.90 2 79 6.2E-27 T 22-04-2016 IPR002634 BolA protein SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 SUPERFAMILY SSF82657 2 79 4.05E-28 T 22-04-2016 IPR002634 BolA protein SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 PANTHER PTHR12735 5 83 2.4E-26 T 22-04-2016 SAMA_RS16050 f3b24cf337bf6fb84d2f74c3d7c69678 85 PIRSF PIRSF003113 1 84 2.3E-22 T 22-04-2016 IPR002634 BolA protein SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 Gene3D G3DSA:3.40.50.300 19 235 3.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 Pfam PF00005 ABC transporter 22 164 7.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 SUPERFAMILY SSF52540 17 246 1.66E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 SUPERFAMILY SSF50331 240 365 6.52E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 PANTHER PTHR24220 270 311 3.7E-77 T 22-04-2016 SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 PANTHER PTHR24220 22 243 3.7E-77 T 22-04-2016 SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SAMA_RS18355 6c7d38d96124d6d1a7d4b1f2b6a3cb1a 370 SMART SM00382 27 214 8.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 PANTHER PTHR33442 4 346 8.2E-151 T 22-04-2016 SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 SUPERFAMILY SSF54506 14 343 9.16E-105 T 22-04-2016 SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 Gene3D G3DSA:3.10.310.10 16 164 1.8E-60 T 22-04-2016 SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 Gene3D G3DSA:3.10.310.10 165 333 6.3E-63 T 22-04-2016 SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 Pfam PF05544 Proline racemase 20 343 1.3E-101 T 22-04-2016 IPR008794 Proline racemase family SAMA_RS07965 41ce85bf9180b569670b59bb0b7fd168 346 PIRSF PIRSF029792 13 346 6.2E-105 T 22-04-2016 IPR008794 Proline racemase family SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 Pfam PF07012 Curlin associated repeat 82 113 9.0E-6 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 Pfam PF07012 Curlin associated repeat 47 80 2.8E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 Pfam PF07012 Curlin associated repeat 69 102 6.3E-7 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 Pfam PF07012 Curlin associated repeat 91 124 4.2E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 PANTHER PTHR34771:SF2 42 144 1.6E-16 T 22-04-2016 SAMA_RS15380 c5fecf2082528e7d152682a3e8a2cdac 144 PANTHER PTHR34771 42 144 1.6E-16 T 22-04-2016 SAMA_RS12275 71da2695de2fc26c4ad8d6ff6254b4e4 92 Gene3D G3DSA:1.10.150.20 3 81 4.0E-22 T 22-04-2016 SAMA_RS12275 71da2695de2fc26c4ad8d6ff6254b4e4 92 PANTHER PTHR36121:SF1 4 76 1.8E-17 T 22-04-2016 SAMA_RS12275 71da2695de2fc26c4ad8d6ff6254b4e4 92 PANTHER PTHR36121 4 76 1.8E-17 T 22-04-2016 SAMA_RS12275 71da2695de2fc26c4ad8d6ff6254b4e4 92 Pfam PF04994 TfoX C-terminal domain 5 77 9.6E-25 T 22-04-2016 IPR007077 TfoX, C-terminal SAMA_RS17415 7b708e7545c2c75a412bcaf4a3cb20be 100 Gene3D G3DSA:3.90.10.10 5 85 4.6E-5 T 22-04-2016 SAMA_RS17415 7b708e7545c2c75a412bcaf4a3cb20be 100 SUPERFAMILY SSF48695 5 87 3.4E-7 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS07825 bce5ff0a0cdce0ab36abaa75e8840072 336 Pfam PF03595 Voltage-dependent anion channel 39 322 6.5E-29 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SAMA_RS07825 bce5ff0a0cdce0ab36abaa75e8840072 336 PANTHER PTHR37955 19 333 1.1E-87 T 22-04-2016 SAMA_RS07825 bce5ff0a0cdce0ab36abaa75e8840072 336 PANTHER PTHR37955:SF1 19 333 1.1E-87 T 22-04-2016 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 Gene3D G3DSA:3.40.640.10 7 247 5.9E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 380 6.6E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 PANTHER PTHR11808 3 385 3.0E-185 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 PIRSF PIRSF001434 1 384 2.6E-136 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 SUPERFAMILY SSF53383 11 382 2.28E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 Gene3D G3DSA:3.90.1150.10 248 383 5.5E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 PANTHER PTHR11808:SF15 3 385 3.0E-185 T 22-04-2016 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SAMA_RS16525 0ffca121b62e9c23ff7c5f0a7156c524 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 3.7E-201 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 Gene3D G3DSA:3.40.50.1000 11 38 6.0E-4 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 16 168 3.5E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 172 6.5E-17 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 PANTHER PTHR18901:SF25 11 204 5.0E-58 T 22-04-2016 SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 SUPERFAMILY SSF56784 14 196 2.67E-34 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 PANTHER PTHR18901 11 204 5.0E-58 T 22-04-2016 SAMA_RS02675 de38104c521d6f7d3b5d64fb03b6d272 204 Gene3D G3DSA:3.40.50.1000 66 198 5.7E-23 T 22-04-2016 IPR023214 HAD-like domain SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 PANTHER PTHR24220:SF70 8 382 3.4E-66 T 22-04-2016 SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 SMART SM00382 290 482 5.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 SMART SM00382 32 207 3.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 SUPERFAMILY SSF52540 5 209 3.99E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 PANTHER PTHR24220 8 382 3.4E-66 T 22-04-2016 SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 Gene3D G3DSA:3.40.50.300 287 451 2.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 Gene3D G3DSA:3.40.50.300 5 209 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 Pfam PF00005 ABC transporter 288 418 3.2E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 Pfam PF00005 ABC transporter 24 158 7.8E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SAMA_RS00665 f284b40aa2468b9ff6ac83d727abad81 496 SUPERFAMILY SSF52540 285 448 1.08E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PANTHER PTHR37533 443 593 2.9E-35 T 22-04-2016 SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PANTHER PTHR37533:SF2 443 593 2.9E-35 T 22-04-2016 SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 Pfam PF02120 Flagellar hook-length control protein FliK 471 549 5.5E-22 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PRINTS PR01007 Flagellar hook-length control protein signature 213 230 5.6E-7 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PRINTS PR01007 Flagellar hook-length control protein signature 316 339 5.6E-7 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PRINTS PR01007 Flagellar hook-length control protein signature 485 503 5.6E-7 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SAMA_RS12000 570ba741ebefa59c890a51434de0f609 593 PRINTS PR01007 Flagellar hook-length control protein signature 518 541 5.6E-7 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 SAMA_RS05280 3bf0c8a1624cc86c7c64165778101192 349 Pfam PF00149 Calcineurin-like phosphoesterase 84 298 4.2E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SAMA_RS05280 3bf0c8a1624cc86c7c64165778101192 349 Gene3D G3DSA:3.60.21.10 83 334 1.7E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS05280 3bf0c8a1624cc86c7c64165778101192 349 SUPERFAMILY SSF56300 83 346 3.63E-48 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 SMART SM00471 163 299 1.1E-7 T 22-04-2016 IPR003607 HD/PDEase domain SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 TIGRFAM TIGR00277 HDIG: HDIG domain 165 257 7.6E-11 T 22-04-2016 IPR006675 HDIG domain SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 Pfam PF01966 HD domain 168 288 4.9E-15 T 22-04-2016 IPR006674 HD domain SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 Gene3D G3DSA:1.10.3210.10 157 290 2.3E-18 T 22-04-2016 IPR006674 HD domain SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 Pfam PF11871 Domain of unknown function (DUF3391) 5 135 1.9E-30 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 SAMA_RS08025 fd759182107d9dd1e78e530a31aa3240 418 SUPERFAMILY SSF109604 163 329 4.4E-28 T 22-04-2016 SAMA_RS15050 3f2b336b92a0be327b60a02e6dc783fc 401 Pfam PF07690 Major Facilitator Superfamily 17 344 2.7E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS15050 3f2b336b92a0be327b60a02e6dc783fc 401 Gene3D G3DSA:1.20.1250.20 202 381 7.6E-20 T 22-04-2016 SAMA_RS15050 3f2b336b92a0be327b60a02e6dc783fc 401 Gene3D G3DSA:1.20.1250.20 13 187 8.8E-12 T 22-04-2016 SAMA_RS15050 3f2b336b92a0be327b60a02e6dc783fc 401 SUPERFAMILY SSF103473 13 380 4.19E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS00095 f7baf6fe70e9a6a8f7c0d5e07ba51488 241 Pfam PF03746 LamB/YcsF family 5 235 2.2E-85 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SAMA_RS00095 f7baf6fe70e9a6a8f7c0d5e07ba51488 241 PANTHER PTHR30292 1 236 8.6E-96 T 22-04-2016 SAMA_RS00095 f7baf6fe70e9a6a8f7c0d5e07ba51488 241 PANTHER PTHR30292:SF0 1 236 8.6E-96 T 22-04-2016 SAMA_RS00095 f7baf6fe70e9a6a8f7c0d5e07ba51488 241 SUPERFAMILY SSF88713 4 238 2.89E-84 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SAMA_RS08595 44ed0a3f643cf177c4c1ef49cfab4055 275 Gene3D G3DSA:3.40.50.1820 9 271 5.7E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS08595 44ed0a3f643cf177c4c1ef49cfab4055 275 PANTHER PTHR10992:SF885 10 272 2.4E-84 T 22-04-2016 SAMA_RS08595 44ed0a3f643cf177c4c1ef49cfab4055 275 PANTHER PTHR10992 10 272 2.4E-84 T 22-04-2016 SAMA_RS08595 44ed0a3f643cf177c4c1ef49cfab4055 275 Pfam PF12697 Alpha/beta hydrolase family 30 264 4.3E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS08595 44ed0a3f643cf177c4c1ef49cfab4055 275 SUPERFAMILY SSF53474 8 271 6.02E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 307 2.3E-102 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 Gene3D G3DSA:3.10.25.10 209 306 6.0E-32 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 303 36.935 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 Pfam PF02911 Formyl transferase, C-terminal domain 206 303 4.9E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 Gene3D G3DSA:3.40.50.170 3 207 8.3E-77 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 SUPERFAMILY SSF50486 207 308 6.59E-32 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 PANTHER PTHR11138 2 303 1.2E-114 T 22-04-2016 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 SUPERFAMILY SSF53328 2 206 6.28E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS00200 a742a78dd2a862d39beeee9e7909f651 320 Pfam PF00551 Formyl transferase 5 183 8.6E-51 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SAMA_RS07850 f0bc840ed5f8be0d03420f7da8160b94 375 PANTHER PTHR36115:SF3 262 368 3.0E-34 T 22-04-2016 SAMA_RS07850 f0bc840ed5f8be0d03420f7da8160b94 375 PANTHER PTHR36115 262 368 3.0E-34 T 22-04-2016 SAMA_RS07850 f0bc840ed5f8be0d03420f7da8160b94 375 Pfam PF06271 RDD family 251 354 8.8E-18 T 22-04-2016 IPR010432 RDD SAMA_RS03270 eb36359b1cc1aea81594399510c90568 248 Gene3D G3DSA:3.40.50.150 6 235 5.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03270 eb36359b1cc1aea81594399510c90568 248 PANTHER PTHR12176 64 186 2.3E-14 T 22-04-2016 SAMA_RS03270 eb36359b1cc1aea81594399510c90568 248 SUPERFAMILY SSF53335 6 214 5.26E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS03270 eb36359b1cc1aea81594399510c90568 248 Pfam PF01564 Spermine/spermidine synthase 45 189 4.5E-9 T 22-04-2016 SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 147 9.8E-61 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 Gene3D G3DSA:3.10.129.10 3 148 6.0E-59 T 22-04-2016 IPR029069 HotDog domain SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 PANTHER PTHR30272 3 152 3.2E-83 T 22-04-2016 SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 150 36.102 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 Pfam PF07977 FabA-like domain 17 142 9.9E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SAMA_RS06025 056830d619ef045fd4c7ff08eb072103 153 SUPERFAMILY SSF54637 6 147 3.4E-50 T 22-04-2016 IPR029069 HotDog domain SAMA_RS08300 907d262327c2b6e77d8f466766a13afc 177 Pfam PF07126 Cell-division protein ZapC 3 167 2.2E-62 T 22-04-2016 IPR009809 Cell division protein ZapC SAMA_RS08300 907d262327c2b6e77d8f466766a13afc 177 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 176 34.9 T 22-04-2016 IPR009809 Cell division protein ZapC SAMA_RS08300 907d262327c2b6e77d8f466766a13afc 177 PIRSF PIRSF010252 1 177 3.9E-69 T 22-04-2016 IPR009809 Cell division protein ZapC SAMA_RS02485 b1c00dedacc234c4c9c369db70df0d19 175 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS02485 b1c00dedacc234c4c9c369db70df0d19 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 3.8E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SAMA_RS06180 6610302d55ad17957a49b9e1c1148dce 75 PANTHER PTHR35175:SF2 1 69 2.3E-20 T 22-04-2016 SAMA_RS06180 6610302d55ad17957a49b9e1c1148dce 75 Pfam PF06945 Protein of unknown function (DUF1289) 3 49 6.8E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 SAMA_RS06180 6610302d55ad17957a49b9e1c1148dce 75 PANTHER PTHR35175 1 69 2.3E-20 T 22-04-2016 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 PANTHER PTHR26402 4 238 1.0E-148 T 22-04-2016 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 SMART SM00448 4 114 1.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 PANTHER PTHR26402:SF586 4 238 1.0E-148 T 22-04-2016 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 SUPERFAMILY SSF46894 135 234 1.08E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 SMART SM00862 156 232 5.9E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 SUPERFAMILY SSF52172 2 129 8.82E-37 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 Gene3D G3DSA:3.40.50.2300 2 124 2.3E-37 T 22-04-2016 SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 Gene3D G3DSA:1.10.10.10 135 233 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS03195 9c1601a965fa7eed91478326ad6278a7 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.6E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SAMA_RS05590 5ae903abeee4b2795ea68f6117f5ff95 460 Pfam PF01145 SPFH domain / Band 7 family 37 287 1.4E-33 T 22-04-2016 IPR001107 Band 7 domain SAMA_RS00180 006670c1f483563a7f8ad4ee2926a098 183 SUPERFAMILY SSF52218 10 172 2.85E-27 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00180 006670c1f483563a7f8ad4ee2926a098 183 Gene3D G3DSA:3.40.50.360 10 181 1.5E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00180 006670c1f483563a7f8ad4ee2926a098 183 Pfam PF12724 Flavodoxin domain 10 160 4.1E-36 T 22-04-2016 IPR026816 Flavodoxin domain SAMA_RS00180 006670c1f483563a7f8ad4ee2926a098 183 PANTHER PTHR38030 3 182 8.3E-76 T 22-04-2016 SAMA_RS00180 006670c1f483563a7f8ad4ee2926a098 183 PANTHER PTHR38030:SF2 3 182 8.3E-76 T 22-04-2016 SAMA_RS15325 e6dee24900bcf1f1e200cb2566e3e1b1 445 PANTHER PTHR33451 1 441 4.1E-203 T 22-04-2016 SAMA_RS15325 e6dee24900bcf1f1e200cb2566e3e1b1 445 Pfam PF03553 Na+/H+ antiporter family 13 225 1.6E-17 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS15325 e6dee24900bcf1f1e200cb2566e3e1b1 445 PANTHER PTHR33451:SF5 1 441 4.1E-203 T 22-04-2016 SAMA_RS15590 b20fd3ffa76115a2f86dbdf3b5a7352f 208 PANTHER PTHR30086:SF0 1 207 1.2E-84 T 22-04-2016 SAMA_RS15590 b20fd3ffa76115a2f86dbdf3b5a7352f 208 Pfam PF01810 LysE type translocator 14 199 1.6E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS15590 b20fd3ffa76115a2f86dbdf3b5a7352f 208 PANTHER PTHR30086 1 207 1.2E-84 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS19180 ecaa9fa47852e8ce4224a6551e8a2e39 104 Gene3D G3DSA:3.40.190.10 7 47 6.2E-5 T 22-04-2016 SAMA_RS19180 ecaa9fa47852e8ce4224a6551e8a2e39 104 SUPERFAMILY SSF53850 12 64 5.79E-5 T 22-04-2016 SAMA_RS06745 10ff6f0e4cdaaa4bc4c5cd880a6b2b07 389 Pfam PF05940 NnrS protein 15 383 3.1E-107 T 22-04-2016 IPR010266 NnrS SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 218 3.9E-81 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 PANTHER PTHR13707 1 231 2.9E-132 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 Pfam PF01144 Coenzyme A transferase 9 217 2.2E-77 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 Gene3D G3DSA:3.40.1080.10 5 218 7.8E-99 T 22-04-2016 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 SUPERFAMILY SSF100950 4 230 7.18E-87 T 22-04-2016 SAMA_RS02770 4fbd19be0f7601178c23b66901ff4551 237 SMART SM00882 8 219 6.7E-92 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SAMA_RS02315 21aa6254b802c6bcd4e6fc7235f49186 126 PANTHER PTHR35303:SF1 1 125 1.3E-71 T 22-04-2016 SAMA_RS02315 21aa6254b802c6bcd4e6fc7235f49186 126 Pfam PF06155 Protein of unknown function (DUF971) 10 91 2.2E-29 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 SAMA_RS02315 21aa6254b802c6bcd4e6fc7235f49186 126 PANTHER PTHR35303 1 125 1.3E-71 T 22-04-2016 SAMA_RS01995 ea508069a3784a18db65518990095f98 205 SUPERFAMILY SSF52540 1 193 1.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01995 ea508069a3784a18db65518990095f98 205 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 197 28.692 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SAMA_RS01995 ea508069a3784a18db65518990095f98 205 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 188 3.3E-66 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SAMA_RS01995 ea508069a3784a18db65518990095f98 205 PANTHER PTHR10695 4 195 5.9E-77 T 22-04-2016 SAMA_RS01995 ea508069a3784a18db65518990095f98 205 Pfam PF01121 Dephospho-CoA kinase 5 182 4.4E-71 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SAMA_RS01995 ea508069a3784a18db65518990095f98 205 Gene3D G3DSA:3.40.50.300 4 196 2.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06535 db9679a7ee01419720a681d7a95cb2a5 222 Pfam PF07445 Primosomal replication protein priC 10 214 2.7E-54 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC SAMA_RS10590 c843f0f31f259124ad40987590a67ee1 119 Pfam PF11042 Protein of unknown function (DUF2750) 9 113 2.8E-35 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 SAMA_RS03420 bcc9da0f2bb57c95bb2f43d064c2d095 124 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 4 120 9.0E-53 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 SAMA_RS03420 bcc9da0f2bb57c95bb2f43d064c2d095 124 PIRSF PIRSF006287 1 123 9.7E-40 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 SAMA_RS03420 bcc9da0f2bb57c95bb2f43d064c2d095 124 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 26.992 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 SAMA_RS03420 bcc9da0f2bb57c95bb2f43d064c2d095 124 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.9E-41 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 Gene3D G3DSA:1.10.287.790 70 109 2.4E-21 T 22-04-2016 IPR027404 LuxT regulator, helix hairpin domain SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 PANTHER PTHR30055 1 130 4.7E-15 T 22-04-2016 SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 SUPERFAMILY SSF46689 2 74 8.72E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 PANTHER PTHR30055:SF11 1 130 4.7E-15 T 22-04-2016 SAMA_RS03855 3f61abb3a30b75b3484cd30dc3a06262 162 Gene3D G3DSA:1.10.357.10 8 69 1.0E-9 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SAMA_RS14010 cbc1dd12e13dcdc1003c026f278e4ab6 423 PANTHER PTHR11101:SF63 1 421 3.1E-260 T 22-04-2016 SAMA_RS14010 cbc1dd12e13dcdc1003c026f278e4ab6 423 Pfam PF01384 Phosphate transporter family 27 410 9.6E-118 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SAMA_RS14010 cbc1dd12e13dcdc1003c026f278e4ab6 423 PANTHER PTHR11101 1 421 3.1E-260 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 Pfam PF08019 Domain of unknown function (DUF1705) 52 202 1.6E-46 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 PANTHER PTHR30443 1 538 6.9E-241 T 22-04-2016 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 Gene3D G3DSA:3.40.720.10 286 493 4.1E-13 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 PANTHER PTHR30443:SF0 1 538 6.9E-241 T 22-04-2016 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 Pfam PF00884 Sulfatase 231 518 1.1E-41 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SAMA_RS09165 411c1e0ed02a838040f5973c8a0c5c2c 538 SUPERFAMILY SSF53649 277 493 9.81E-22 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SAMA_RS09830 b147eeeb549a00ad6c63bc23704881e3 279 SUPERFAMILY SSF53098 102 266 4.7E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09830 b147eeeb549a00ad6c63bc23704881e3 279 Pfam PF13276 HTH-like domain 30 84 1.4E-12 T 22-04-2016 IPR025948 HTH-like domain SAMA_RS09830 b147eeeb549a00ad6c63bc23704881e3 279 Gene3D G3DSA:3.30.420.10 103 262 1.2E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SAMA_RS09830 b147eeeb549a00ad6c63bc23704881e3 279 PANTHER PTHR32552 1 276 2.9E-75 T 22-04-2016 SAMA_RS09830 b147eeeb549a00ad6c63bc23704881e3 279 Pfam PF00665 Integrase core domain 110 223 5.1E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 PANTHER PTHR30009:SF2 20 484 2.3E-175 T 22-04-2016 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 390 467 5.6E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 Pfam PF02378 Phosphotransferase system, EIIC 28 332 1.1E-54 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 PANTHER PTHR30009 20 484 2.3E-175 T 22-04-2016 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 421 438 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 Gene3D G3DSA:3.30.1360.60 410 482 1.4E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 Pfam PF00367 phosphotransferase system, EIIB 411 443 5.2E-11 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SAMA_RS05940 c0c971b5b0a195eb6b36b503cfe803cf 485 SUPERFAMILY SSF55604 411 481 5.23E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SAMA_RS12750 e5ac3afafd55bc0c757cf9a6862955f1 247 PANTHER PTHR30296 2 247 4.4E-118 T 22-04-2016 SAMA_RS12750 e5ac3afafd55bc0c757cf9a6862955f1 247 PANTHER PTHR30296:SF0 2 247 4.4E-118 T 22-04-2016 SAMA_RS12750 e5ac3afafd55bc0c757cf9a6862955f1 247 Pfam PF02754 Cysteine-rich domain 3 83 1.1E-12 T 22-04-2016 IPR004017 Cysteine-rich domain SAMA_RS12750 e5ac3afafd55bc0c757cf9a6862955f1 247 Pfam PF02754 Cysteine-rich domain 141 224 4.7E-11 T 22-04-2016 IPR004017 Cysteine-rich domain SAMA_RS15485 aa2e74a9a4670508ff0946cff79cf2a2 673 SUPERFAMILY SSF54001 291 421 9.05E-11 T 22-04-2016 SAMA_RS15485 aa2e74a9a4670508ff0946cff79cf2a2 673 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 87 237 4.1E-22 T 22-04-2016 IPR024618 Domain of unknown function DUF3857 SAMA_RS15485 aa2e74a9a4670508ff0946cff79cf2a2 673 Pfam PF01841 Transglutaminase-like superfamily 294 358 9.7E-5 T 22-04-2016 IPR002931 Transglutaminase-like SAMA_RS14385 62ed9a980ce140bce06f4450403dfad7 272 Gene3D G3DSA:3.90.10.10 175 268 2.0E-5 T 22-04-2016 SAMA_RS14385 62ed9a980ce140bce06f4450403dfad7 272 SUPERFAMILY SSF48695 37 269 7.34E-62 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS13920 09ca8e7bd900d458d86fee1368455b19 273 SUPERFAMILY SSF143631 3 263 1.78E-48 T 22-04-2016 IPR003374 ApbE-like domain SAMA_RS13920 09ca8e7bd900d458d86fee1368455b19 273 Pfam PF02424 ApbE family 10 257 6.5E-31 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SAMA_RS13920 09ca8e7bd900d458d86fee1368455b19 273 PANTHER PTHR30040 1 266 8.0E-44 T 22-04-2016 SAMA_RS09080 3c764e93ad496b3db211bda1c1c5dea5 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 2.6E-51 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 SAMA_RS10625 41322cc08c276cef16d1ce862e92835c 262 Pfam PF12973 ChrR Cupin-like domain 160 237 6.8E-17 T 22-04-2016 IPR025979 ChrR-like cupin domain SAMA_RS10625 41322cc08c276cef16d1ce862e92835c 262 Gene3D G3DSA:2.60.120.10 159 247 3.4E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SAMA_RS10625 41322cc08c276cef16d1ce862e92835c 262 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 259 1.2E-56 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative SAMA_RS10625 41322cc08c276cef16d1ce862e92835c 262 SUPERFAMILY SSF51182 160 248 2.12E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 2 88 24.834 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 Gene3D G3DSA:3.30.70.1460 4 88 3.8E-32 T 22-04-2016 IPR027471 YbeD-like domain SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 Pfam PF04359 Protein of unknown function (DUF493) 9 88 1.5E-27 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 PANTHER PTHR38036:SF1 1 88 7.8E-35 T 22-04-2016 SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 PANTHER PTHR38036 1 88 7.8E-35 T 22-04-2016 SAMA_RS13545 6d3869baf45e4846e3994b67bf79a944 88 SUPERFAMILY SSF117991 3 88 6.15E-29 T 22-04-2016 IPR027471 YbeD-like domain SAMA_RS17290 f25e3139975530a5b26909a35ab3503c 67 Pfam PF06005 Protein of unknown function (DUF904) 1 63 2.9E-15 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 SAMA_RS17290 f25e3139975530a5b26909a35ab3503c 67 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 65 15.395 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 SAMA_RS16530 595a72e39499b4ff4e25269495b05e39 104 Pfam PF01340 Met Apo-repressor, MetJ 3 99 6.1E-58 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 SAMA_RS16530 595a72e39499b4ff4e25269495b05e39 104 Gene3D G3DSA:1.10.140.10 2 104 2.4E-62 T 22-04-2016 IPR023453 Methionine repressor MetJ domain SAMA_RS16530 595a72e39499b4ff4e25269495b05e39 104 SUPERFAMILY SSF47598 3 104 1.76E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SAMA_RS16530 595a72e39499b4ff4e25269495b05e39 104 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 SAMA_RS03035 77b4ed0d21413ba304171b6096dffd3a 134 Gene3D G3DSA:3.40.190.10 22 125 3.3E-5 T 22-04-2016 SAMA_RS03035 77b4ed0d21413ba304171b6096dffd3a 134 SUPERFAMILY SSF53850 9 124 2.47E-11 T 22-04-2016 SAMA_RS01510 1656a6ff816d72e159fe5ad9f8425878 338 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 13 319 2.5E-75 T 22-04-2016 IPR025534 Putative PD-(D/E)XK family member (DUF4420) SAMA_RS02780 ba91961baef1c38a8fe72355083bf552 315 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 49 251 5.6E-43 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 SAMA_RS02780 ba91961baef1c38a8fe72355083bf552 315 SUPERFAMILY SSF53474 137 315 1.13E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02780 ba91961baef1c38a8fe72355083bf552 315 Gene3D G3DSA:3.40.50.1820 11 282 2.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS02780 ba91961baef1c38a8fe72355083bf552 315 Pfam PF10503 Esterase PHB depolymerase 48 247 1.3E-37 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 SAMA_RS02780 ba91961baef1c38a8fe72355083bf552 315 SUPERFAMILY SSF53474 29 130 1.01E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS05330 98db8414b8804023f13fd349943c03ac 165 PANTHER PTHR36305 5 165 5.8E-72 T 22-04-2016 SAMA_RS05330 98db8414b8804023f13fd349943c03ac 165 PIRSF PIRSF006162 10 164 1.7E-49 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SAMA_RS05330 98db8414b8804023f13fd349943c03ac 165 Pfam PF04608 Phosphatidylglycerophosphatase A 20 157 2.7E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SAMA_RS05330 98db8414b8804023f13fd349943c03ac 165 SUPERFAMILY SSF101307 13 156 9.16E-47 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SAMA_RS07660 06332021019395e0c46c6bde8aac0690 417 PANTHER PTHR30572:SF7 16 417 1.5E-87 T 22-04-2016 SAMA_RS07660 06332021019395e0c46c6bde8aac0690 417 Pfam PF12704 MacB-like periplasmic core domain 27 260 4.1E-33 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SAMA_RS07660 06332021019395e0c46c6bde8aac0690 417 PANTHER PTHR30572 16 417 1.5E-87 T 22-04-2016 SAMA_RS07660 06332021019395e0c46c6bde8aac0690 417 Pfam PF02687 FtsX-like permease family 298 410 1.1E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS08640 b47069e6527261e359d2936a859aa9ee 228 Gene3D G3DSA:3.40.1550.10 18 174 2.5E-12 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS08640 b47069e6527261e359d2936a859aa9ee 228 Pfam PF11813 Protein of unknown function (DUF3334) 4 228 1.2E-117 T 22-04-2016 IPR024513 Protein of unknown function DUF3334 SAMA_RS08640 b47069e6527261e359d2936a859aa9ee 228 SUPERFAMILY SSF103039 10 173 9.42E-22 T 22-04-2016 IPR028976 CheC-like domain SAMA_RS00005 293406b9083156629ff1fcf2615207fd 146 SUPERFAMILY SSF52218 1 146 8.8E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00005 293406b9083156629ff1fcf2615207fd 146 PANTHER PTHR19384:SF81 1 146 1.2E-26 T 22-04-2016 SAMA_RS00005 293406b9083156629ff1fcf2615207fd 146 PANTHER PTHR19384 1 146 1.2E-26 T 22-04-2016 SAMA_RS00005 293406b9083156629ff1fcf2615207fd 146 Gene3D G3DSA:3.40.50.360 1 145 2.6E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain SAMA_RS00005 293406b9083156629ff1fcf2615207fd 146 Pfam PF00258 Flavodoxin 6 128 1.1E-20 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SAMA_RS15805 c3242d2e429165df1aef00de932fe232 151 Gene3D G3DSA:1.20.1260.10 5 135 4.6E-8 T 22-04-2016 IPR012347 Ferritin-related SAMA_RS15805 c3242d2e429165df1aef00de932fe232 151 SUPERFAMILY SSF47240 6 140 5.73E-5 T 22-04-2016 IPR009078 Ferritin-like superfamily SAMA_RS13975 53c0b936915aee2a29053e3aa2099c43 137 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 136 8.5E-41 T 22-04-2016 IPR019231 Protein of unknown function DUF2170 SAMA_RS15210 fc0b810998d650dfb14e11a8e9252327 176 PANTHER PTHR34473 36 175 7.6E-23 T 22-04-2016 SAMA_RS15210 fc0b810998d650dfb14e11a8e9252327 176 Pfam PF03703 Bacterial PH domain 91 166 1.2E-17 T 22-04-2016 IPR005182 Domain of unknown function DUF304 SAMA_RS09825 b378d6b33959f60c4c7838e18d704b9d 92 SUPERFAMILY SSF46689 1 89 5.73E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS09825 b378d6b33959f60c4c7838e18d704b9d 92 Gene3D G3DSA:1.10.10.60 8 86 1.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SAMA_RS09825 b378d6b33959f60c4c7838e18d704b9d 92 PANTHER PTHR33215 1 89 6.0E-25 T 22-04-2016 SAMA_RS09825 b378d6b33959f60c4c7838e18d704b9d 92 Pfam PF01527 Transposase 4 70 9.7E-16 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SAMA_RS09825 b378d6b33959f60c4c7838e18d704b9d 92 PANTHER PTHR33215:SF1 1 89 6.0E-25 T 22-04-2016 SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 SMART SM00825 Beta-ketoacyl synthase 4 399 3.8E-8 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 237 338 8.2E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 91 230 7.9E-22 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 Gene3D G3DSA:3.40.47.10 243 396 6.0E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 SUPERFAMILY SSF53901 3 230 7.41E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 149 165 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 Gene3D G3DSA:3.40.47.10 3 231 3.2E-34 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 SUPERFAMILY SSF53901 204 395 3.63E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SAMA_RS17645 4faff7cdc85fea7a31d3b7691e317cff 401 PANTHER PTHR11712 149 396 3.0E-57 T 22-04-2016 SAMA_RS18025 bfd936816e24cd6c2ed0b89177ea8796 321 Pfam PF02687 FtsX-like permease family 197 314 8.8E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS18025 bfd936816e24cd6c2ed0b89177ea8796 321 PIRSF PIRSF003097 17 317 2.0E-75 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SAMA_RS07150 17dae82bfc048ecffca25291a88ab5a0 213 PANTHER PTHR36920:SF1 1 213 2.2E-85 T 22-04-2016 SAMA_RS07150 17dae82bfc048ecffca25291a88ab5a0 213 PANTHER PTHR36920 1 213 2.2E-85 T 22-04-2016 SAMA_RS07150 17dae82bfc048ecffca25291a88ab5a0 213 Gene3D G3DSA:2.40.160.20 25 213 4.2E-71 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS07150 17dae82bfc048ecffca25291a88ab5a0 213 SUPERFAMILY SSF56925 26 213 1.54E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SAMA_RS07150 17dae82bfc048ecffca25291a88ab5a0 213 Pfam PF03922 OmpW family 26 213 4.9E-61 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 SAMA_RS00010 8146396d10582d9b30f3504195c62dc8 304 Gene3D G3DSA:3.60.10.10 76 249 2.6E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS00010 8146396d10582d9b30f3504195c62dc8 304 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 99 280 7.6E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS00010 8146396d10582d9b30f3504195c62dc8 304 SUPERFAMILY SSF56219 74 288 6.02E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15000 07d3d85607665c72e190621dd6e058bf 70 SUPERFAMILY SSF47598 4 47 1.78E-7 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SAMA_RS15000 07d3d85607665c72e190621dd6e058bf 70 Gene3D G3DSA:1.10.1220.10 6 47 6.3E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 SMART SM00411 1 90 3.7E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 Gene3D G3DSA:4.10.520.10 1 90 6.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 SUPERFAMILY SSF47729 1 90 1.18E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SAMA_RS16460 ed19f84eb0c74cac29644a56aa4ecacd 90 PANTHER PTHR33175 1 90 3.2E-43 T 22-04-2016 SAMA_RS02700 08418fdebb1e29969d079bace33d15fb 351 SUPERFAMILY SSF52151 154 334 3.24E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS02700 08418fdebb1e29969d079bace33d15fb 351 SUPERFAMILY SSF52151 30 102 3.24E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 PANTHER PTHR13748 241 338 2.2E-53 T 22-04-2016 SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 PANTHER PTHR13748 6 208 2.2E-53 T 22-04-2016 SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 338 1.7E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 SUPERFAMILY SSF52540 6 191 5.31E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 Gene3D G3DSA:3.40.50.300 5 187 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS12775 ca87e5f9e9407986f09449e3b00260c9 346 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 183 8.2E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SAMA_RS08275 f7db6793b4f709f4b72b378356458ca0 454 Gene3D G3DSA:2.50.20.10 342 450 6.3E-36 T 22-04-2016 SAMA_RS08275 f7db6793b4f709f4b72b378356458ca0 454 Gene3D G3DSA:2.50.20.10 159 309 6.3E-36 T 22-04-2016 SAMA_RS08275 f7db6793b4f709f4b72b378356458ca0 454 Pfam PF07044 Protein of unknown function (DUF1329) 83 449 1.1E-156 T 22-04-2016 IPR010752 Protein of unknown function DUF1329 SAMA_RS04635 24edcbf085f31307212635451d5852f1 262 PANTHER PTHR38034 2 262 1.1E-95 T 22-04-2016 SAMA_RS04635 24edcbf085f31307212635451d5852f1 262 Pfam PF01578 Cytochrome C assembly protein 37 260 4.3E-28 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SAMA_RS14645 781bc8b2eb91492fc6c4c23a2949e88a 106 PANTHER PTHR35175:SF1 1 78 5.3E-37 T 22-04-2016 SAMA_RS14645 781bc8b2eb91492fc6c4c23a2949e88a 106 PANTHER PTHR35175 1 78 5.3E-37 T 22-04-2016 SAMA_RS14645 781bc8b2eb91492fc6c4c23a2949e88a 106 Pfam PF06945 Protein of unknown function (DUF1289) 11 57 1.7E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 SAMA_RS03670 d375d5deb67f648395f2d6d2ba13b324 203 Pfam PF13511 Domain of unknown function (DUF4124) 15 63 7.4E-11 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 SAMA_RS17250 abfd0759fff06b81a275a73a75a227f6 483 PANTHER PTHR40269 32 473 6.0E-72 T 22-04-2016 SAMA_RS17250 abfd0759fff06b81a275a73a75a227f6 483 PANTHER PTHR40269:SF1 32 473 6.0E-72 T 22-04-2016 SAMA_RS17250 abfd0759fff06b81a275a73a75a227f6 483 Pfam PF11737 Protein of unknown function (DUF3300) 43 270 4.2E-87 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 Pfam PF12697 Alpha/beta hydrolase family 44 302 1.3E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 Gene3D G3DSA:3.40.50.1820 3 308 1.1E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PANTHER PTHR10992 5 20 2.5E-36 T 22-04-2016 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PANTHER PTHR10992 36 309 2.5E-36 T 22-04-2016 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PANTHER PTHR10992:SF909 5 20 2.5E-36 T 22-04-2016 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PANTHER PTHR10992:SF909 36 309 2.5E-36 T 22-04-2016 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 SUPERFAMILY SSF53474 37 308 5.04E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS10120 2ab38627f0ab72cbf0868891054bac7e 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 81 1.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS07915 e55f24a823755a698db348081f2716e7 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 12 87 4.8E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted SAMA_RS07915 e55f24a823755a698db348081f2716e7 88 Pfam PF13937 Domain of unknown function (DUF4212) 10 86 2.1E-34 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted SAMA_RS14815 97fd892e0e4061f95078de0bf1de52e1 179 SUPERFAMILY SSF52833 77 173 6.28E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14815 97fd892e0e4061f95078de0bf1de52e1 179 PANTHER PTHR32234 1 179 5.4E-27 T 22-04-2016 SAMA_RS14815 97fd892e0e4061f95078de0bf1de52e1 179 Pfam PF13899 Thioredoxin-like 81 147 1.5E-8 T 22-04-2016 SAMA_RS14815 97fd892e0e4061f95078de0bf1de52e1 179 Gene3D G3DSA:3.40.30.10 63 176 1.3E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS16235 f9fc25116a6133ed1548268e6725d2ee 757 Gene3D G3DSA:2.60.40.1120 127 167 4.9E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SAMA_RS08560 77d03ec88c5d2eb13d69db1dfba3b519 83 Pfam PF11446 Protein of unknown function (DUF2897) 2 47 8.4E-20 T 22-04-2016 IPR021550 Protein of unknown function DUF2897 SAMA_RS17050 fbbdd16ee5df8378c2d12ebf0c34c02a 194 PIRSF PIRSF016919 3 190 1.7E-47 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein SAMA_RS17050 fbbdd16ee5df8378c2d12ebf0c34c02a 194 Pfam PF04955 HupE / UreJ protein 8 185 1.1E-56 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein SAMA_RS00425 52879d7f6ea15d66dec0ae116046cc83 619 PANTHER PTHR33361:SF6 61 617 2.7E-216 T 22-04-2016 SAMA_RS00425 52879d7f6ea15d66dec0ae116046cc83 619 PANTHER PTHR33361 61 617 2.7E-216 T 22-04-2016 SAMA_RS00425 52879d7f6ea15d66dec0ae116046cc83 619 Pfam PF05960 Bacterial protein of unknown function (DUF885) 81 609 7.8E-173 T 22-04-2016 IPR010281 Protein of unknown function DUF885 SAMA_RS15030 b65e92d1980b714225638e69ace99bfe 327 Pfam PF07885 Ion channel 239 326 9.0E-11 T 22-04-2016 IPR013099 Potassium channel domain SAMA_RS15030 b65e92d1980b714225638e69ace99bfe 327 SUPERFAMILY SSF81324 232 327 5.49E-15 T 22-04-2016 SAMA_RS15030 b65e92d1980b714225638e69ace99bfe 327 Gene3D G3DSA:1.10.287.70 203 326 3.7E-20 T 22-04-2016 SAMA_RS15030 b65e92d1980b714225638e69ace99bfe 327 SUPERFAMILY SSF141571 53 141 8.63E-16 T 22-04-2016 SAMA_RS15030 b65e92d1980b714225638e69ace99bfe 327 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 6.9E-8 T 22-04-2016 IPR001646 Pentapeptide repeat SAMA_RS03220 3929ba5c478b09a66c7755d10375176b 224 Pfam PF00849 RNA pseudouridylate synthase 22 166 4.3E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS03220 3929ba5c478b09a66c7755d10375176b 224 SUPERFAMILY SSF55120 8 216 1.26E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS03220 3929ba5c478b09a66c7755d10375176b 224 PANTHER PTHR11079 6 218 6.3E-70 T 22-04-2016 SAMA_RS03220 3929ba5c478b09a66c7755d10375176b 224 PANTHER PTHR11079:SF86 6 218 6.3E-70 T 22-04-2016 SAMA_RS13780 01f8758497f1bd88233fc7f8e4cd69b1 198 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 183 1.8E-19 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS13780 01f8758497f1bd88233fc7f8e4cd69b1 198 Gene3D G3DSA:3.40.50.1110 28 190 1.2E-35 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS13780 01f8758497f1bd88233fc7f8e4cd69b1 198 SUPERFAMILY SSF52266 29 190 6.26E-36 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SAMA_RS13780 01f8758497f1bd88233fc7f8e4cd69b1 198 PANTHER PTHR30383 28 191 6.2E-28 T 22-04-2016 SAMA_RS14925 c945ff6ee615e2f9d2b4fb272faf65a2 129 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 9 123 1.6E-35 T 22-04-2016 IPR018893 Type VIII secretion system, CsgF SAMA_RS00185 997d49722dfcf33085276d0d1dd3fa84 480 PANTHER PTHR32024:SF3 1 478 1.3E-296 T 22-04-2016 SAMA_RS00185 997d49722dfcf33085276d0d1dd3fa84 480 PIRSF PIRSF006247 1 480 1.0E-168 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SAMA_RS00185 997d49722dfcf33085276d0d1dd3fa84 480 PANTHER PTHR32024 1 478 1.3E-296 T 22-04-2016 SAMA_RS00185 997d49722dfcf33085276d0d1dd3fa84 480 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 463 1.7E-104 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SAMA_RS00185 997d49722dfcf33085276d0d1dd3fa84 480 Pfam PF02386 Cation transport protein 41 479 2.2E-56 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SAMA_RS10785 905f720fae128809433de3a35142d490 138 Pfam PF01047 MarR family 36 88 3.3E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS10785 905f720fae128809433de3a35142d490 138 Gene3D G3DSA:1.10.10.10 4 135 2.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10785 905f720fae128809433de3a35142d490 138 SUPERFAMILY SSF46785 4 136 4.26E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SAMA_RS10785 905f720fae128809433de3a35142d490 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 6.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS10785 905f720fae128809433de3a35142d490 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 6.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS10785 905f720fae128809433de3a35142d490 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 6.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS10785 905f720fae128809433de3a35142d490 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 6.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS10785 905f720fae128809433de3a35142d490 138 PANTHER PTHR18964 23 135 1.4E-31 T 22-04-2016 SAMA_RS10785 905f720fae128809433de3a35142d490 138 PANTHER PTHR18964:SF125 23 135 1.4E-31 T 22-04-2016 SAMA_RS10785 905f720fae128809433de3a35142d490 138 SMART SM00347 24 124 3.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 Gene3D G3DSA:1.20.950.20 122 336 2.6E-57 T 22-04-2016 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 125 329 6.9E-48 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 PANTHER PTHR30074:SF2 35 338 2.2E-149 T 22-04-2016 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 Pfam PF01292 Prokaryotic cytochrome b561 127 301 2.1E-16 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 SUPERFAMILY SSF81342 122 335 2.04E-40 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS18760 d51d2c7da868feee8561639824feaba8 338 PANTHER PTHR30074 35 338 2.2E-149 T 22-04-2016 SAMA_RS02685 a2c61ea6e45acfaed34875476c5fc088 196 PANTHER PTHR37549:SF1 3 196 7.4E-36 T 22-04-2016 SAMA_RS02685 a2c61ea6e45acfaed34875476c5fc088 196 SUPERFAMILY SSF141488 120 194 1.57E-14 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor SAMA_RS02685 a2c61ea6e45acfaed34875476c5fc088 196 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 123 186 2.1E-14 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor SAMA_RS02685 a2c61ea6e45acfaed34875476c5fc088 196 Pfam PF07007 Protein of unknown function (DUF1311) 40 108 1.6E-6 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 SAMA_RS02685 a2c61ea6e45acfaed34875476c5fc088 196 PANTHER PTHR37549 3 196 7.4E-36 T 22-04-2016 SAMA_RS06740 e4855913b46ba12917ec7395485510ac 134 PANTHER PTHR37819:SF1 1 134 4.2E-45 T 22-04-2016 SAMA_RS06740 e4855913b46ba12917ec7395485510ac 134 PIRSF PIRSF029598 1 130 3.9E-39 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 SAMA_RS06740 e4855913b46ba12917ec7395485510ac 134 PANTHER PTHR37819 1 134 4.2E-45 T 22-04-2016 SAMA_RS06740 e4855913b46ba12917ec7395485510ac 134 Pfam PF06146 Phosphate-starvation-inducible E 46 112 2.6E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like SAMA_RS14060 aac0c84a3f15bef3e906043e60c466b1 157 PANTHER PTHR36302 24 155 8.1E-27 T 22-04-2016 SAMA_RS14060 aac0c84a3f15bef3e906043e60c466b1 157 PANTHER PTHR36302:SF1 24 155 8.1E-27 T 22-04-2016 SAMA_RS14060 aac0c84a3f15bef3e906043e60c466b1 157 Pfam PF04314 Protein of unknown function (DUF461) 30 136 2.8E-31 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SAMA_RS14060 aac0c84a3f15bef3e906043e60c466b1 157 SUPERFAMILY SSF110087 5 142 4.45E-41 T 22-04-2016 IPR007410 DR1885-like metal-binding protein SAMA_RS09995 208f01c506c166acd79f57a7add1b5a3 154 SUPERFAMILY SSF52833 1 153 4.11E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS09995 208f01c506c166acd79f57a7add1b5a3 154 PANTHER PTHR10681 1 135 2.3E-39 T 22-04-2016 SAMA_RS09995 208f01c506c166acd79f57a7add1b5a3 154 Gene3D G3DSA:3.40.30.10 2 153 1.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS09995 208f01c506c166acd79f57a7add1b5a3 154 Pfam PF00578 AhpC/TSA family 7 135 2.4E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS05550 cc65c24da4a1e542ca9513c4bf44cf77 526 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 17 515 5.4E-194 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SAMA_RS05550 cc65c24da4a1e542ca9513c4bf44cf77 526 SUPERFAMILY SSF55931 7 515 1.44E-192 T 22-04-2016 SAMA_RS05550 cc65c24da4a1e542ca9513c4bf44cf77 526 PANTHER PTHR38761 1 525 2.7E-269 T 22-04-2016 SAMA_RS05550 cc65c24da4a1e542ca9513c4bf44cf77 526 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 526 227.515 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SAMA_RS05550 cc65c24da4a1e542ca9513c4bf44cf77 526 Pfam PF04262 Glutamate-cysteine ligase 10 382 1.4E-166 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SAMA_RS13340 03e1c372656a8560f99822a1c16242ca 120 Pfam PF04892 VanZ like family 28 107 1.4E-8 T 22-04-2016 IPR006976 VanZ-like SAMA_RS13340 03e1c372656a8560f99822a1c16242ca 120 SUPERFAMILY SSF144091 7 114 5.49E-5 T 22-04-2016 SAMA_RS06495 89de1aeccfb912c8d7e1fc959bf615a3 131 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 131 2.3E-46 T 22-04-2016 IPR014320 Phage shock protein, PspC SAMA_RS06495 89de1aeccfb912c8d7e1fc959bf615a3 131 PANTHER PTHR33885 9 130 1.1E-26 T 22-04-2016 SAMA_RS06495 89de1aeccfb912c8d7e1fc959bf615a3 131 Pfam PF04024 PspC domain 7 64 1.4E-16 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SAMA_RS03095 ee22c015ffee706ada8b26034f3ee44b 142 SUPERFAMILY SSF53850 20 136 7.6E-10 T 22-04-2016 SAMA_RS03095 ee22c015ffee706ada8b26034f3ee44b 142 Gene3D G3DSA:3.40.190.10 22 137 3.2E-9 T 22-04-2016 SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 PIRSF PIRSF006105 1 157 5.7E-60 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 Gene3D G3DSA:4.10.1020.10 62 129 8.1E-31 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 SUPERFAMILY SSF48695 33 150 1.8E-46 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 20 142 4.7E-49 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 PANTHER PTHR38604:SF1 1 149 7.1E-49 T 22-04-2016 SAMA_RS08480 c016c66040f80e6e771050b013f637a6 157 PANTHER PTHR38604 1 149 7.1E-49 T 22-04-2016 SAMA_RS04290 2217dea7d067faab94c2afb498090299 173 Pfam PF12915 Protein of unknown function (DUF3833) 11 172 2.1E-66 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 SAMA_RS19090 2357e89f9fc0f972d9352f46b024a662 282 PANTHER PTHR35024:SF2 8 111 1.1E-20 T 22-04-2016 SAMA_RS19090 2357e89f9fc0f972d9352f46b024a662 282 PANTHER PTHR35024 8 111 1.1E-20 T 22-04-2016 SAMA_RS19090 2357e89f9fc0f972d9352f46b024a662 282 Pfam PF04519 Polymer-forming cytoskeletal 8 102 1.7E-19 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SAMA_RS14555 8a83f58d21e7f4719d1a10ebf0252e42 168 Pfam PF14539 Domain of unknown function (DUF4442) 31 161 3.1E-54 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 SAMA_RS14555 8a83f58d21e7f4719d1a10ebf0252e42 168 Gene3D G3DSA:3.10.129.10 19 162 1.1E-54 T 22-04-2016 IPR029069 HotDog domain SAMA_RS14555 8a83f58d21e7f4719d1a10ebf0252e42 168 SUPERFAMILY SSF54637 19 161 5.71E-24 T 22-04-2016 IPR029069 HotDog domain SAMA_RS15055 e786c5025e17adb082e70ed7757e1eb0 281 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 31 280 2.3E-101 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 SAMA_RS15055 e786c5025e17adb082e70ed7757e1eb0 281 Pfam PF10987 Protein of unknown function (DUF2806) 51 270 7.8E-82 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 343 6.1E-36 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 SUPERFAMILY SSF55073 190 343 8.63E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 Gene3D G3DSA:3.30.70.270 187 343 1.7E-44 T 22-04-2016 SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 SMART SM00267 174 345 3.1E-45 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 PANTHER PTHR10799 216 343 2.3E-22 T 22-04-2016 SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 341 3.5E-38 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS10445 be7eeabee257364faf3e465117b0e1ea 347 PANTHER PTHR10799:SF750 216 343 2.3E-22 T 22-04-2016 SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.3E-35 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.2E-23 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 Gene3D G3DSA:2.60.300.12 2 96 8.3E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 PANTHER PTHR10072:SF48 1 107 1.2E-50 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 SUPERFAMILY SSF89360 1 96 1.57E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.7E-59 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SAMA_RS06780 4d061a7595ee5b8e7fa6f1c2f7458938 107 PANTHER PTHR10072 1 107 1.2E-50 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 2.4E-54 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 SUPERFAMILY SSF51735 1 333 4.08E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 Gene3D G3DSA:3.40.50.720 1 198 6.1E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PANTHER PTHR10366:SF77 255 333 6.6E-171 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PANTHER PTHR10366:SF77 2 236 6.6E-171 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PANTHER PTHR10366 255 333 6.6E-171 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PANTHER PTHR10366 2 236 6.6E-171 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 Gene3D G3DSA:3.90.25.10 199 218 2.0E-18 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 Gene3D G3DSA:3.90.25.10 260 331 2.0E-18 T 22-04-2016 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 3.4E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 3.4E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 3.4E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS11720 3437bb527eab92d55e3d2c087c3c6edd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.4E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SAMA_RS15040 f8e27c62a225d998f40425df6683911d 178 SUPERFAMILY SSF81342 22 171 4.55E-9 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS15040 f8e27c62a225d998f40425df6683911d 178 Pfam PF01292 Prokaryotic cytochrome b561 52 171 4.0E-8 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.170.130.10 59 169 6.4E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 PANTHER PTHR40980:SF2 39 758 6.1E-127 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 PANTHER PTHR40980:SF2 783 967 6.1E-127 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 SUPERFAMILY SSF56935 35 235 2.98E-83 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 SUPERFAMILY SSF56935 804 967 2.98E-83 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 SUPERFAMILY SSF56935 279 497 2.98E-83 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 SUPERFAMILY SSF56935 539 741 2.98E-83 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 967 4.3E-194 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Pfam PF00593 TonB dependent receptor 648 965 1.7E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.40.170.20 794 967 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.40.170.20 170 326 2.6E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.40.170.20 427 605 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.40.170.20 327 391 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Gene3D G3DSA:2.40.170.20 641 740 4.5E-51 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 163 7.1E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 PANTHER PTHR40980 39 758 6.1E-127 T 22-04-2016 SAMA_RS07290 e27c271e746b4c5885db3407472b10d5 967 PANTHER PTHR40980 783 967 6.1E-127 T 22-04-2016 SAMA_RS08265 39aa91ebb9db98466eef8b6505758c14 89 Pfam PF11197 Protein of unknown function (DUF2835) 21 87 1.1E-24 T 22-04-2016 IPR021363 Protein of unknown function DUF2835 SAMA_RS00625 dfccb99918397ec2472ab6104f7443d8 270 Gene3D G3DSA:3.40.190.10 188 268 1.4E-25 T 22-04-2016 SAMA_RS00625 dfccb99918397ec2472ab6104f7443d8 270 PANTHER PTHR37945 1 269 1.1E-107 T 22-04-2016 SAMA_RS00625 dfccb99918397ec2472ab6104f7443d8 270 SUPERFAMILY SSF53850 28 256 6.26E-29 T 22-04-2016 SAMA_RS00625 dfccb99918397ec2472ab6104f7443d8 270 Pfam PF12849 PBP superfamily domain 30 248 6.1E-26 T 22-04-2016 IPR024370 PBP domain SAMA_RS00625 dfccb99918397ec2472ab6104f7443d8 270 Gene3D G3DSA:3.40.190.10 13 154 8.3E-44 T 22-04-2016 SAMA_RS06485 ea701fe1337d89849296e030d5358926 227 PANTHER PTHR31088 2 219 3.7E-109 T 22-04-2016 SAMA_RS06485 ea701fe1337d89849296e030d5358926 227 Pfam PF04012 PspA/IM30 family 2 216 2.9E-43 T 22-04-2016 IPR007157 PspA/IM30 SAMA_RS06485 ea701fe1337d89849296e030d5358926 227 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 8.8E-94 T 22-04-2016 IPR014319 Phage shock protein, PspA SAMA_RS06485 ea701fe1337d89849296e030d5358926 227 PANTHER PTHR31088:SF7 2 219 3.7E-109 T 22-04-2016 SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 SUPERFAMILY SSF55920 161 434 8.77E-58 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 439 58.127 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 Pfam PF00557 Metallopeptidase family M24 166 425 1.6E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 PANTHER PTHR10804 1 436 2.0E-208 T 22-04-2016 SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 Gene3D G3DSA:3.90.230.10 159 434 1.1E-57 T 22-04-2016 IPR000994 Peptidase M24, structural domain SAMA_RS00155 947fd8d5e0fc77f05f4ebeb8397dc353 439 PANTHER PTHR10804:SF101 1 436 2.0E-208 T 22-04-2016 SAMA_RS17600 844211849972157e653eda992e910d06 454 Gene3D G3DSA:3.30.300.30 348 450 1.1E-9 T 22-04-2016 SAMA_RS17600 844211849972157e653eda992e910d06 454 Gene3D G3DSA:3.40.50.980 132 282 3.7E-12 T 22-04-2016 SAMA_RS17600 844211849972157e653eda992e910d06 454 Pfam PF00501 AMP-binding enzyme 123 287 7.2E-13 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SAMA_RS17600 844211849972157e653eda992e910d06 454 SUPERFAMILY SSF56801 3 451 9.81E-46 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 209 7.6E-58 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 SUPERFAMILY SSF53756 55 399 5.76E-14 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417 128 138 3.9E-113 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417 188 415 3.9E-113 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417 1 109 3.9E-113 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417:SF2 128 138 3.9E-113 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417:SF2 188 415 3.9E-113 T 22-04-2016 SAMA_RS00505 9d114134c1e98a0af69d504a2ccc28f9 420 PANTHER PTHR23417:SF2 1 109 3.9E-113 T 22-04-2016 SAMA_RS05815 0e262c601b17b2f4867f6620c5a0db1f 123 Gene3D G3DSA:3.10.180.10 12 120 1.9E-13 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS05815 0e262c601b17b2f4867f6620c5a0db1f 123 SUPERFAMILY SSF54593 11 120 6.44E-15 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SAMA_RS00810 5ce6f340ffeb7db94c1a1e2ce805f50d 171 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 86 155 8.7E-21 T 22-04-2016 IPR018656 Domain of unknown function DUF2087 SAMA_RS17725 cfa1927ab369bb2cc5fc6fe69634b740 217 Pfam PF11172 Protein of unknown function (DUF2959) 15 212 1.2E-88 T 22-04-2016 IPR021342 Protein of unknown function DUF2959 SAMA_RS17725 cfa1927ab369bb2cc5fc6fe69634b740 217 SUPERFAMILY SSF111474 33 104 1.05E-6 T 22-04-2016 SAMA_RS08490 c9a75401291e4e7bc32b5e6786c4d1de 267 SMART SM01150 5 265 1.4E-121 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 SAMA_RS08490 c9a75401291e4e7bc32b5e6786c4d1de 267 PANTHER PTHR31136:SF2 1 267 6.3E-119 T 22-04-2016 SAMA_RS08490 c9a75401291e4e7bc32b5e6786c4d1de 267 Pfam PF07063 Domain of unknown function (DUF1338) 7 264 9.7E-47 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 SAMA_RS08490 c9a75401291e4e7bc32b5e6786c4d1de 267 PANTHER PTHR31136 1 267 6.3E-119 T 22-04-2016 SAMA_RS16630 e5d068e0d85217311ebd9ee0b387110e 123 Pfam PF11964 SpoIIAA-like 13 116 5.3E-13 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS16630 e5d068e0d85217311ebd9ee0b387110e 123 SUPERFAMILY SSF52091 1 116 2.51E-19 T 22-04-2016 IPR002645 STAS domain SAMA_RS16630 e5d068e0d85217311ebd9ee0b387110e 123 Gene3D G3DSA:3.40.50.10600 1 116 1.0E-22 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS03070 a0aabea9480eae8955331996e4df8df7 184 Pfam PF10263 SprT-like family 53 180 1.3E-23 T 22-04-2016 IPR006640 SprT-like SAMA_RS03070 a0aabea9480eae8955331996e4df8df7 184 PANTHER PTHR38773 19 179 6.3E-61 T 22-04-2016 SAMA_RS03070 a0aabea9480eae8955331996e4df8df7 184 SMART SM00731 33 181 7.0E-37 T 22-04-2016 IPR006640 SprT-like SAMA_RS06630 37c21cf1cc85644c82cf433fe31dded8 256 PANTHER PTHR30269:SF0 5 256 2.7E-96 T 22-04-2016 SAMA_RS06630 37c21cf1cc85644c82cf433fe31dded8 256 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 3.6E-39 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS06630 37c21cf1cc85644c82cf433fe31dded8 256 PANTHER PTHR30269 5 256 2.7E-96 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 427 1.6E-105 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 Gene3D G3DSA:1.20.1600.10 18 421 1.1E-79 T 22-04-2016 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 Pfam PF02321 Outer membrane efflux protein 26 207 1.1E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 Pfam PF02321 Outer membrane efflux protein 232 414 1.4E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 SUPERFAMILY SSF56954 2 420 4.58E-92 T 22-04-2016 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 PANTHER PTHR30026:SF3 1 428 5.8E-142 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SAMA_RS15915 0a42f0a74783491b2c28ce4ee792607e 432 PANTHER PTHR30026 1 428 5.8E-142 T 22-04-2016 SAMA_RS16280 04cff3632ee3c3b9be1d67530c42a169 436 Gene3D G3DSA:3.30.565.10 158 280 4.2E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS16280 04cff3632ee3c3b9be1d67530c42a169 436 Pfam PF14213 Domain of unknown function (DUF4325) 363 424 2.0E-13 T 22-04-2016 IPR025474 Domain of unknown function DUF4325 SAMA_RS16280 04cff3632ee3c3b9be1d67530c42a169 436 SUPERFAMILY SSF55874 156 280 1.91E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SAMA_RS10005 0947668f6e3e1d528161906af708504c 76 Gene3D G3DSA:3.30.110.40 3 69 6.6E-17 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS10005 0947668f6e3e1d528161906af708504c 76 Pfam PF01206 Sulfurtransferase TusA 4 69 5.4E-16 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS10005 0947668f6e3e1d528161906af708504c 76 SUPERFAMILY SSF64307 2 69 3.92E-17 T 22-04-2016 IPR001455 TusA-like domain SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 PANTHER PTHR23521:SF2 2 416 1.4E-187 T 22-04-2016 SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 Gene3D G3DSA:1.20.1250.20 204 383 1.5E-27 T 22-04-2016 SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 Pfam PF07690 Major Facilitator Superfamily 8 319 5.6E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 SUPERFAMILY SSF103473 6 376 3.53E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 PANTHER PTHR23521 2 416 1.4E-187 T 22-04-2016 SAMA_RS16230 0db855ebcdb4359b583e61ce5c0a4e46 468 Gene3D G3DSA:1.20.1250.20 6 178 1.7E-12 T 22-04-2016 SAMA_RS07895 1f4e8b32c0a61c3de4381ed84cc13e0d 163 Pfam PF11143 Protein of unknown function (DUF2919) 10 155 7.6E-46 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 SUPERFAMILY SSF55073 257 410 1.8E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 PANTHER PTHR10799:SF750 1 131 2.8E-25 T 22-04-2016 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 PANTHER PTHR10799:SF750 285 407 2.8E-25 T 22-04-2016 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 410 8.9E-48 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 Gene3D G3DSA:3.30.70.270 253 410 3.4E-52 T 22-04-2016 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 407 9.6E-46 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 PANTHER PTHR10799 1 131 2.8E-25 T 22-04-2016 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 PANTHER PTHR10799 285 407 2.8E-25 T 22-04-2016 SAMA_RS15070 5204c636dfe29dd57e1f48b6413155d7 424 SMART SM00267 241 412 8.8E-56 T 22-04-2016 IPR000160 GGDEF domain SAMA_RS17975 009f9a571d97cac5fc30502cf309763c 251 PIRSF PIRSF031679 1 251 3.5E-74 T 22-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted SAMA_RS17975 009f9a571d97cac5fc30502cf309763c 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 57 181 1.6E-8 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SAMA_RS17975 009f9a571d97cac5fc30502cf309763c 251 PANTHER PTHR10108 52 234 4.7E-12 T 22-04-2016 SAMA_RS17975 009f9a571d97cac5fc30502cf309763c 251 Gene3D G3DSA:3.40.50.150 32 213 1.8E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS17975 009f9a571d97cac5fc30502cf309763c 251 SUPERFAMILY SSF53335 25 214 5.47E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 SUPERFAMILY SSF52317 57 248 4.59E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922:SF18 23 71 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922:SF18 158 248 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922:SF18 87 142 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922 23 71 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922 158 248 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 PANTHER PTHR11922 87 142 2.1E-57 T 22-04-2016 SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 Gene3D G3DSA:3.40.50.880 7 251 1.4E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SAMA_RS13855 a1bfe7cb4a70227604a5468f3cea70a0 254 Pfam PF07722 Peptidase C26 7 225 5.9E-69 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 SAMA_RS10365 987e362941c2c62f40c531bbfdf30ef2 174 PANTHER PTHR38099 2 174 5.4E-71 T 22-04-2016 SAMA_RS10365 987e362941c2c62f40c531bbfdf30ef2 174 Pfam PF02620 Uncharacterized ACR, COG1399 61 172 4.4E-14 T 22-04-2016 IPR003772 Protein of unknown function DUF177 SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 SUPERFAMILY SSF52833 22 194 6.77E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 Pfam PF01323 DSBA-like thioredoxin domain 43 188 1.5E-17 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 PIRSF PIRSF001488 1 203 5.6E-56 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 Gene3D G3DSA:3.40.30.10 122 201 3.2E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 Gene3D G3DSA:3.40.30.10 1 120 1.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 PANTHER PTHR35891 1 204 1.8E-90 T 22-04-2016 SAMA_RS17300 993ce26dd1bcf7c14e93acfaa454c94f 204 PANTHER PTHR35891:SF2 1 204 1.8E-90 T 22-04-2016 SAMA_RS10060 5847fafee50fa4a0e995fe772d225738 507 PANTHER PTHR30029 2 505 5.7E-235 T 22-04-2016 SAMA_RS10060 5847fafee50fa4a0e995fe772d225738 507 PANTHER PTHR30029:SF2 2 505 5.7E-235 T 22-04-2016 SAMA_RS10060 5847fafee50fa4a0e995fe772d225738 507 Pfam PF04293 SpoVR like protein 12 441 3.1E-176 T 22-04-2016 IPR007390 Sporulation stage V, protein R SAMA_RS03090 3107f4a0a272d6d448c6baef72fc1567 403 SUPERFAMILY SSF56935 5 310 1.36E-24 T 22-04-2016 SAMA_RS03090 3107f4a0a272d6d448c6baef72fc1567 403 SUPERFAMILY SSF56935 344 403 1.36E-24 T 22-04-2016 SAMA_RS15310 f402d33849d867e666b20902b28a1bb0 217 PANTHER PTHR23026:SF101 2 217 1.0E-95 T 22-04-2016 SAMA_RS15310 f402d33849d867e666b20902b28a1bb0 217 Gene3D G3DSA:3.40.109.10 1 216 6.3E-62 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS15310 f402d33849d867e666b20902b28a1bb0 217 PANTHER PTHR23026 2 217 1.0E-95 T 22-04-2016 SAMA_RS15310 f402d33849d867e666b20902b28a1bb0 217 Pfam PF00881 Nitroreductase family 9 193 4.4E-27 T 22-04-2016 IPR029479 Nitroreductase SAMA_RS15310 f402d33849d867e666b20902b28a1bb0 217 SUPERFAMILY SSF55469 7 216 2.62E-62 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SAMA_RS11065 346f7a9d0b0460393fb257abe614db88 384 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 57 376 2.1E-103 T 22-04-2016 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family SAMA_RS16190 c112c95bec3972aecffe75bbb402d3e7 81 Pfam PF12292 Protein of unknown function (DUF3624) 1 75 8.6E-33 T 22-04-2016 IPR022072 Protein of unknown function DUF3624 SAMA_RS15420 a63ab32523e06670b4a236ce3fd43078 182 Pfam PF11810 Domain of unknown function (DUF3332) 7 179 5.8E-45 T 22-04-2016 IPR021768 Protein of unknown function DUF3332 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 PANTHER PTHR30469:SF10 10 352 3.2E-84 T 22-04-2016 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 SUPERFAMILY SSF111369 52 267 8.89E-20 T 22-04-2016 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 349 1.8E-70 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 Gene3D G3DSA:2.40.50.100 159 190 2.2E-16 T 22-04-2016 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 Gene3D G3DSA:2.40.50.100 64 97 2.2E-16 T 22-04-2016 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 PANTHER PTHR30469 10 352 3.2E-84 T 22-04-2016 SAMA_RS08945 154412d677ebd295a7b3d9391bd4f77e 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 266 2.3E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS14765 681f770c2fbd0ae45053d9a1c4bd45f7 255 PANTHER PTHR34390 6 252 1.4E-113 T 22-04-2016 SAMA_RS14765 681f770c2fbd0ae45053d9a1c4bd45f7 255 Pfam PF06738 Putative threonine/serine exporter 15 250 2.9E-66 T 22-04-2016 IPR010619 Putative threonine/serine exporter SAMA_RS14765 681f770c2fbd0ae45053d9a1c4bd45f7 255 PANTHER PTHR34390:SF2 6 252 1.4E-113 T 22-04-2016 SAMA_RS11595 f67363b2a2ee3a1301cbdd424bed2706 213 PANTHER PTHR35011:SF1 2 122 3.8E-68 T 22-04-2016 SAMA_RS11595 f67363b2a2ee3a1301cbdd424bed2706 213 PANTHER PTHR35011:SF1 149 199 3.8E-68 T 22-04-2016 SAMA_RS11595 f67363b2a2ee3a1301cbdd424bed2706 213 PANTHER PTHR35011 2 122 3.8E-68 T 22-04-2016 SAMA_RS11595 f67363b2a2ee3a1301cbdd424bed2706 213 PANTHER PTHR35011 149 199 3.8E-68 T 22-04-2016 SAMA_RS11595 f67363b2a2ee3a1301cbdd424bed2706 213 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 178 1.2E-22 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SAMA_RS07285 bced908f63ea2e304f8d4a19d2453945 272 Pfam PF10977 Protein of unknown function (DUF2797) 36 268 2.4E-93 T 22-04-2016 IPR021246 Protein of unknown function DUF2797 SAMA_RS12590 1a3a7ac3e24444bdfe27492e30b9c0c2 79 TIGRFAM TIGR02922 TIGR02922: TIGR02922 family protein 7 70 3.7E-32 T 22-04-2016 IPR014271 Conserved hypothetical protein CHP02922 SAMA_RS12590 1a3a7ac3e24444bdfe27492e30b9c0c2 79 Pfam PF09558 Protein of unknown function (DUF2375) 4 71 4.0E-38 T 22-04-2016 IPR014271 Conserved hypothetical protein CHP02922 SAMA_RS16540 dedeec2addf42877810b0ca1132736a5 397 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 315 3.1E-73 T 22-04-2016 IPR032811 Putative conjugal transfer protein TraF-related SAMA_RS16540 dedeec2addf42877810b0ca1132736a5 397 Gene3D G3DSA:2.40.160.60 26 386 1.0E-10 T 22-04-2016 SAMA_RS16540 dedeec2addf42877810b0ca1132736a5 397 SUPERFAMILY SSF56935 26 91 5.8E-8 T 22-04-2016 SAMA_RS16540 dedeec2addf42877810b0ca1132736a5 397 SUPERFAMILY SSF56935 224 386 5.8E-8 T 22-04-2016 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 Pfam PF01593 Flavin containing amine oxidoreductase 11 270 1.2E-15 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 SUPERFAMILY SSF51905 382 411 6.91E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 SUPERFAMILY SSF51905 2 301 6.91E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 PANTHER PTHR10742:SF275 1 413 4.7E-213 T 22-04-2016 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 Gene3D G3DSA:3.50.50.60 201 297 1.5E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 Gene3D G3DSA:3.50.50.60 2 126 1.5E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04265 1def2884f90d689f16ca3619c188629f 420 PANTHER PTHR10742 1 413 4.7E-213 T 22-04-2016 SAMA_RS15655 19fb4ce2846c3635ac6d1372afee4b8d 83 SUPERFAMILY SSF118001 1 79 2.09E-15 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 SAMA_RS15655 19fb4ce2846c3635ac6d1372afee4b8d 83 Gene3D G3DSA:1.10.10.610 1 82 1.1E-22 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 SAMA_RS15655 19fb4ce2846c3635ac6d1372afee4b8d 83 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 74 1.0E-22 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 SAMA_RS15655 19fb4ce2846c3635ac6d1372afee4b8d 83 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 70 2.0E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 SAMA_RS07615 caf43963e5d80718f282a7368e243d2f 435 PANTHER PTHR34596 53 435 3.1E-35 T 22-04-2016 SAMA_RS07615 caf43963e5d80718f282a7368e243d2f 435 SUPERFAMILY SSF56935 283 432 2.68E-5 T 22-04-2016 SAMA_RS07615 caf43963e5d80718f282a7368e243d2f 435 SUPERFAMILY SSF56935 97 256 2.68E-5 T 22-04-2016 SAMA_RS07615 caf43963e5d80718f282a7368e243d2f 435 Pfam PF03573 outer membrane porin, OprD family 55 433 2.8E-40 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SAMA_RS07615 caf43963e5d80718f282a7368e243d2f 435 Gene3D G3DSA:2.40.160.10 61 435 3.4E-73 T 22-04-2016 IPR023614 Porin domain SAMA_RS08885 46be87cce08a4ad54871099e0ed90185 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.4E-21 T 22-04-2016 IPR021249 Protein of unknown function DUF2788 SAMA_RS10765 b7d6bb2741240b853ce29b6369789e20 372 SUPERFAMILY SSF51197 5 282 2.75E-67 T 22-04-2016 SAMA_RS10765 b7d6bb2741240b853ce29b6369789e20 372 Pfam PF08007 Cupin superfamily protein 9 301 1.4E-85 T 22-04-2016 IPR003347 JmjC domain SAMA_RS10765 b7d6bb2741240b853ce29b6369789e20 372 PANTHER PTHR13096 6 341 2.2E-47 T 22-04-2016 SAMA_RS10765 b7d6bb2741240b853ce29b6369789e20 372 Gene3D G3DSA:2.60.120.650 6 204 2.7E-38 T 22-04-2016 SAMA_RS10765 b7d6bb2741240b853ce29b6369789e20 372 SMART SM00558 82 218 8.5E-5 T 22-04-2016 IPR003347 JmjC domain SAMA_RS16865 568be18b08b6612843aa009b16943332 338 PRINTS PR00184 Neisseria sp. porin signature 89 108 5.9E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS16865 568be18b08b6612843aa009b16943332 338 PRINTS PR00184 Neisseria sp. porin signature 327 338 5.9E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS16865 568be18b08b6612843aa009b16943332 338 PRINTS PR00184 Neisseria sp. porin signature 52 77 5.9E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 SAMA_RS16865 568be18b08b6612843aa009b16943332 338 Gene3D G3DSA:2.40.160.10 23 338 1.3E-44 T 22-04-2016 IPR023614 Porin domain SAMA_RS16865 568be18b08b6612843aa009b16943332 338 SUPERFAMILY SSF56935 23 338 1.25E-47 T 22-04-2016 SAMA_RS16865 568be18b08b6612843aa009b16943332 338 Pfam PF13609 Gram-negative porin 7 315 3.8E-46 T 22-04-2016 SAMA_RS10915 dcc8ff2a71ee6f7074e7f1745b0f0007 327 SUPERFAMILY SSF74653 239 326 1.75E-20 T 22-04-2016 SAMA_RS10915 dcc8ff2a71ee6f7074e7f1745b0f0007 327 TIGRFAM TIGR02794 tolA_full: protein TolA 13 325 4.9E-63 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SAMA_RS10915 dcc8ff2a71ee6f7074e7f1745b0f0007 327 Gene3D G3DSA:3.30.1150.10 227 326 1.6E-31 T 22-04-2016 SAMA_RS10915 dcc8ff2a71ee6f7074e7f1745b0f0007 327 Pfam PF06519 TolA C-terminal 229 323 6.5E-29 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SAMA_RS06995 c6c444369f5cffc0ab7954b4452a85c5 249 SUPERFAMILY SSF56112 17 205 2.71E-12 T 22-04-2016 IPR011009 Protein kinase-like domain SAMA_RS06995 c6c444369f5cffc0ab7954b4452a85c5 249 Pfam PF01636 Phosphotransferase enzyme family 29 226 1.6E-5 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SAMA_RS02575 6191fa8b537232b1004fd6ee94b44df8 386 PANTHER PTHR30294:SF2 1 385 1.6E-137 T 22-04-2016 SAMA_RS02575 6191fa8b537232b1004fd6ee94b44df8 386 Pfam PF12698 ABC-2 family transporter protein 22 368 1.6E-37 T 22-04-2016 SAMA_RS02575 6191fa8b537232b1004fd6ee94b44df8 386 PANTHER PTHR30294 1 385 1.6E-137 T 22-04-2016 SAMA_RS04910 faa36c1dfb466bc444e1d3529a725c3f 287 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 238 1.2E-7 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS04910 faa36c1dfb466bc444e1d3529a725c3f 287 SUPERFAMILY SSF53850 41 239 3.04E-16 T 22-04-2016 SAMA_RS14150 eebe71793c7cefd0339757bbe424416a 278 Pfam PF11150 Protein of unknown function (DUF2927) 52 248 1.2E-55 T 22-04-2016 IPR021323 Protein of unknown function DUF2927 SAMA_RS01265 c1b1ee5b76438391d49342c11b958c6c 66 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 3.4E-18 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SAMA_RS01265 c1b1ee5b76438391d49342c11b958c6c 66 PANTHER PTHR37531:SF1 1 64 2.0E-23 T 22-04-2016 SAMA_RS01265 c1b1ee5b76438391d49342c11b958c6c 66 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 2.3E-19 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SAMA_RS01265 c1b1ee5b76438391d49342c11b958c6c 66 PANTHER PTHR37531 1 64 2.0E-23 T 22-04-2016 SAMA_RS14595 13f8f84fb5f411ca80efdfcf136a74ee 178 Pfam PF00583 Acetyltransferase (GNAT) family 69 149 2.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SAMA_RS14595 13f8f84fb5f411ca80efdfcf136a74ee 178 Gene3D G3DSA:3.40.630.30 15 172 2.8E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14595 13f8f84fb5f411ca80efdfcf136a74ee 178 SUPERFAMILY SSF55729 11 172 4.29E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SAMA_RS14595 13f8f84fb5f411ca80efdfcf136a74ee 178 PANTHER PTHR23091 16 172 4.2E-48 T 22-04-2016 SAMA_RS14595 13f8f84fb5f411ca80efdfcf136a74ee 178 PANTHER PTHR23091:SF262 16 172 4.2E-48 T 22-04-2016 SAMA_RS00760 09cad357a65a79adc26829eead725678 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 76 244 4.5E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS00760 09cad357a65a79adc26829eead725678 292 SUPERFAMILY SSF53850 43 246 1.45E-14 T 22-04-2016 SAMA_RS15440 2128df8bc988e453824574e58a6f15f1 121 Pfam PF11342 Protein of unknown function (DUF3144) 32 110 1.5E-30 T 22-04-2016 IPR021490 Protein of unknown function DUF3144 SAMA_RS14760 38ccc7c7732f0beafaa961eeced47711 155 PANTHER PTHR34390 1 155 2.2E-43 T 22-04-2016 SAMA_RS14760 38ccc7c7732f0beafaa961eeced47711 155 Pfam PF12821 Threonine/Serine exporter, ThrE 11 146 9.7E-35 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 25 134 4.9E-48 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 PANTHER PTHR34354:SF1 6 285 9.2E-96 T 22-04-2016 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 Gene3D G3DSA:3.30.1130.10 148 285 6.0E-53 T 22-04-2016 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 PANTHER PTHR34354 6 285 9.2E-96 T 22-04-2016 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 Pfam PF14489 QueF-like protein 199 272 1.3E-24 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 SUPERFAMILY SSF55620 189 269 3.48E-8 T 22-04-2016 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 Gene3D G3DSA:3.30.1130.10 25 137 9.4E-43 T 22-04-2016 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 285 166.119 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 TIGRFAM TIGR03138 QueF: queuine synthase 14 285 1.2E-123 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS05870 2da32e3e31ca862ae9590d88d78f52e4 285 PIRSF PIRSF004750 11 285 3.2E-125 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 PANTHER PTHR21666 174 418 7.1E-106 T 22-04-2016 SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 Gene3D G3DSA:2.70.70.10 247 389 1.1E-47 T 22-04-2016 SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 Pfam PF01551 Peptidase family M23 292 386 1.2E-32 T 22-04-2016 IPR016047 Peptidase M23 SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 150 7.8E-6 T 22-04-2016 IPR007340 Opacity-associated protein A SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 PANTHER PTHR21666:SF207 174 418 7.1E-106 T 22-04-2016 SAMA_RS06650 07319de8d6bf217e25f54e3a7701aeb0 419 SUPERFAMILY SSF51261 142 388 1.83E-70 T 22-04-2016 IPR011055 Duplicated hybrid motif SAMA_RS05915 4f688d513e7b0b25797fa8695d690334 129 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.7E-28 T 22-04-2016 IPR021732 Protein of unknown function DUF3301 SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 Gene3D G3DSA:2.40.50.100 67 84 1.9E-7 T 22-04-2016 SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 Gene3D G3DSA:2.40.50.100 159 192 1.9E-7 T 22-04-2016 SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 344 3.7E-57 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 37 251 5.7E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 SUPERFAMILY SSF111369 44 211 1.31E-13 T 22-04-2016 SAMA_RS00705 52a30365e6da3aaa747a8d7541460196 356 PANTHER PTHR30469 18 355 7.6E-50 T 22-04-2016 SAMA_RS10030 262314cd0ceb529bfd2925a65f0c45f3 384 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 23 263 1.2E-68 T 22-04-2016 IPR018642 Protein of unknown function DUF2066 SAMA_RS07560 4f689c239d67cd0ba15c0e94f60e01af 86 SUPERFAMILY SSF89957 1 79 1.83E-22 T 22-04-2016 IPR029756 MTH1187/YkoF-like SAMA_RS07560 4f689c239d67cd0ba15c0e94f60e01af 86 Gene3D G3DSA:3.30.70.930 3 75 1.8E-12 T 22-04-2016 IPR029756 MTH1187/YkoF-like SAMA_RS07560 4f689c239d67cd0ba15c0e94f60e01af 86 Pfam PF07615 YKOF-related Family 5 65 2.3E-4 T 22-04-2016 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 Pfam PF11412 Disulphide bond corrector protein DsbC 45 155 7.2E-20 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 Pfam PF13899 Thioredoxin-like 595 664 1.2E-9 T 22-04-2016 SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 Gene3D G3DSA:3.40.30.10 594 671 1.3E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 PANTHER PTHR32234 1 685 7.0E-116 T 22-04-2016 SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 PANTHER PTHR32234:SF3 1 685 7.0E-116 T 22-04-2016 SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 SUPERFAMILY SSF52833 594 671 7.6E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SAMA_RS14200 0a48c871b6126e43892a6d2fcfbe19ca 689 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 303 476 1.2E-11 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SAMA_RS15600 05525749b52bc2cbf8315bbe101f2d30 680 Gene3D G3DSA:1.10.710.10 185 302 4.6E-9 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SAMA_RS15600 05525749b52bc2cbf8315bbe101f2d30 680 SUPERFAMILY SSF48695 506 678 1.54E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS15600 05525749b52bc2cbf8315bbe101f2d30 680 SUPERFAMILY SSF48695 163 321 1.54E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS15600 05525749b52bc2cbf8315bbe101f2d30 680 Gene3D G3DSA:3.90.10.10 486 675 3.5E-12 T 22-04-2016 SAMA_RS07815 46df062af2b46c29ec01c74e811add6a 496 PANTHER PTHR10283:SF43 353 487 1.6E-117 T 22-04-2016 SAMA_RS07815 46df062af2b46c29ec01c74e811add6a 496 PANTHER PTHR10283:SF43 78 336 1.6E-117 T 22-04-2016 SAMA_RS07815 46df062af2b46c29ec01c74e811add6a 496 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 491 3.8E-133 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 SAMA_RS07815 46df062af2b46c29ec01c74e811add6a 496 PANTHER PTHR10283 353 487 1.6E-117 T 22-04-2016 SAMA_RS07815 46df062af2b46c29ec01c74e811add6a 496 PANTHER PTHR10283 78 336 1.6E-117 T 22-04-2016 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 SUPERFAMILY SSF46626 26 159 1.01E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 Gene3D G3DSA:1.10.760.10 133 205 3.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 PANTHER PTHR33751 5 205 1.5E-66 T 22-04-2016 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 PIRSF PIRSF000005 1 206 5.3E-63 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 Pfam PF00034 Cytochrome c 120 206 5.5E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 Pfam PF00034 Cytochrome c 32 106 5.6E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 PANTHER PTHR33751:SF3 5 205 1.5E-66 T 22-04-2016 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 Gene3D G3DSA:1.10.760.10 32 132 6.2E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS00460 2e0ab4b3ec98b1b14032fbf6e11d367f 206 SUPERFAMILY SSF46626 136 205 9.07E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SAMA_RS07000 244366cfb8b97e1ea434f6e9ba928ece 156 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 98 5.4E-16 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS07000 244366cfb8b97e1ea434f6e9ba928ece 156 SUPERFAMILY SSF69118 7 148 9.68E-38 T 22-04-2016 IPR029032 AhpD-like SAMA_RS07000 244366cfb8b97e1ea434f6e9ba928ece 156 Gene3D G3DSA:1.20.1290.10 15 151 2.9E-41 T 22-04-2016 IPR029032 AhpD-like SAMA_RS07000 244366cfb8b97e1ea434f6e9ba928ece 156 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 81 1.2E-13 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 Pfam PF01266 FAD dependent oxidoreductase 29 383 3.9E-48 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 SUPERFAMILY SSF51905 27 332 3.45E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 PANTHER PTHR13847:SF215 4 425 6.5E-243 T 22-04-2016 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 PANTHER PTHR13847 4 425 6.5E-243 T 22-04-2016 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 Gene3D G3DSA:3.50.50.60 175 255 1.2E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 Gene3D G3DSA:3.50.50.60 15 121 1.2E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS10825 8ff8473de7cbf8065c8d53836d31bc13 429 Gene3D G3DSA:3.50.50.60 347 391 1.2E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SAMA_RS04700 d8dc7095f8e0a2141c7aaf0051d9fac3 222 Gene3D G3DSA:1.20.950.20 34 185 1.0E-8 T 22-04-2016 SAMA_RS04700 d8dc7095f8e0a2141c7aaf0051d9fac3 222 Pfam PF01292 Prokaryotic cytochrome b561 6 178 2.4E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SAMA_RS04700 d8dc7095f8e0a2141c7aaf0051d9fac3 222 SUPERFAMILY SSF81342 2 189 1.49E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SAMA_RS15995 fe70aef743cc1bffc7a208a3017d1708 248 Pfam PF04338 Protein of unknown function, DUF481 37 247 1.1E-52 T 22-04-2016 IPR007433 Protein of unknown function DUF481 SAMA_RS14105 11ac97bdbdc1a66a02f023627601c83a 166 Pfam PF05425 Copper resistance protein D 50 152 1.2E-9 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 SAMA_RS14105 11ac97bdbdc1a66a02f023627601c83a 166 Gene3D G3DSA:1.20.810.10 47 152 4.1E-4 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain SAMA_RS15150 0bd509e6c9c6d9d8b7f23fc19d559173 169 Pfam PF10881 Protein of unknown function (DUF2726) 54 167 1.1E-6 T 22-04-2016 IPR024402 Domain of unknown function DUF2726 SAMA_RS18790 5232b093649d6db51451b08fc52f5a56 214 Pfam PF11748 Protein of unknown function (DUF3306) 7 138 6.2E-31 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 SAMA_RS08440 7d314a7b53968966e5f5caece10377b5 1297 PANTHER PTHR36985 14 1297 2.2E-248 T 22-04-2016 SAMA_RS08440 7d314a7b53968966e5f5caece10377b5 1297 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 958 1296 2.0E-55 T 22-04-2016 IPR007452 Translocation and assembly module TamB SAMA_RS05890 5604e32733a9a80122b8d7002cfba943 118 Pfam PF11399 Protein of unknown function (DUF3192) 18 116 1.9E-40 T 22-04-2016 IPR021534 Protein of unknown function DUF3192 SAMA_RS18775 c95ea8657051e09832998c3c169b22d6 64 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 62 8.3E-20 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing SAMA_RS18775 c95ea8657051e09832998c3c169b22d6 64 PIRSF PIRSF036704 1 64 2.8E-21 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing SAMA_RS01445 fbda6b9478a86509fe8da850a632e44d 288 SUPERFAMILY SSF53448 1 283 5.41E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS01445 fbda6b9478a86509fe8da850a632e44d 288 Pfam PF12804 MobA-like NTP transferase domain 7 126 8.9E-12 T 22-04-2016 IPR025877 MobA-like NTP transferase SAMA_RS01445 fbda6b9478a86509fe8da850a632e44d 288 Gene3D G3DSA:3.90.550.10 5 284 4.4E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS14605 e661fe030cf51e1bc91f889f1e8658a1 354 SUPERFAMILY SSF52151 10 139 4.19E-27 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS14605 e661fe030cf51e1bc91f889f1e8658a1 354 SUPERFAMILY SSF52151 216 319 4.19E-27 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SAMA_RS14605 e661fe030cf51e1bc91f889f1e8658a1 354 Gene3D G3DSA:3.40.366.10 214 312 1.1E-18 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS14605 e661fe030cf51e1bc91f889f1e8658a1 354 Gene3D G3DSA:3.40.366.10 73 133 1.1E-18 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SAMA_RS18460 97a8aa7aff129ea10d750f4ac537f5fd 243 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 3 243 2.2E-68 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS18460 97a8aa7aff129ea10d750f4ac537f5fd 243 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 30 243 2.8E-23 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SAMA_RS04745 6861d9f3b6d5e0ed8193cb8e16fec2e9 364 SMART SM00448 4 114 2.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04745 6861d9f3b6d5e0ed8193cb8e16fec2e9 364 PANTHER PTHR26402 4 132 8.4E-22 T 22-04-2016 SAMA_RS04745 6861d9f3b6d5e0ed8193cb8e16fec2e9 364 Pfam PF00072 Response regulator receiver domain 6 114 6.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SAMA_RS04745 6861d9f3b6d5e0ed8193cb8e16fec2e9 364 Gene3D G3DSA:3.40.50.2300 4 130 2.5E-28 T 22-04-2016 SAMA_RS04745 6861d9f3b6d5e0ed8193cb8e16fec2e9 364 SUPERFAMILY SSF52172 1 132 5.12E-29 T 22-04-2016 IPR011006 CheY-like superfamily SAMA_RS13210 488ca3f7cfefa4075bdae8c92135b0d2 74 Pfam PF04400 Protein of unknown function (DUF539) 22 63 2.8E-22 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM SAMA_RS13210 488ca3f7cfefa4075bdae8c92135b0d2 74 PANTHER PTHR40691 2 74 9.4E-28 T 22-04-2016 SAMA_RS18500 1f1fae202ea5d1dd84fa68873c7dafbd 189 PANTHER PTHR34478 1 187 8.7E-71 T 22-04-2016 SAMA_RS18500 1f1fae202ea5d1dd84fa68873c7dafbd 189 SUPERFAMILY SSF140478 22 176 7.85E-47 T 22-04-2016 IPR023353 LemA-like domain SAMA_RS18500 1f1fae202ea5d1dd84fa68873c7dafbd 189 Gene3D G3DSA:1.20.1440.20 10 183 2.9E-52 T 22-04-2016 IPR023353 LemA-like domain SAMA_RS18500 1f1fae202ea5d1dd84fa68873c7dafbd 189 Pfam PF04011 LemA family 6 182 1.1E-52 T 22-04-2016 IPR007156 LemA SAMA_RS17070 a58fcf708c247dd4cdd5cccb0a0076cf 238 SUPERFAMILY SSF53850 17 236 3.91E-21 T 22-04-2016 SAMA_RS17070 a58fcf708c247dd4cdd5cccb0a0076cf 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 237 6.5E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS17070 a58fcf708c247dd4cdd5cccb0a0076cf 238 Gene3D G3DSA:3.40.190.10 201 237 3.9E-7 T 22-04-2016 SAMA_RS17070 a58fcf708c247dd4cdd5cccb0a0076cf 238 Gene3D G3DSA:3.40.190.10 19 100 3.9E-7 T 22-04-2016 SAMA_RS15015 f67e48cce3b08b932754a342639c9f90 313 Pfam PF13646 HEAT repeats 213 278 3.8E-9 T 22-04-2016 SAMA_RS15015 f67e48cce3b08b932754a342639c9f90 313 Gene3D G3DSA:1.25.10.10 211 282 3.8E-6 T 22-04-2016 IPR011989 Armadillo-like helical SAMA_RS15015 f67e48cce3b08b932754a342639c9f90 313 SUPERFAMILY SSF48371 214 281 3.21E-7 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SAMA_RS11890 55ba306335af9e80b9d6e4bf2631b45a 102 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 80 6.7E-18 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11890 55ba306335af9e80b9d6e4bf2631b45a 102 Gene3D G3DSA:3.40.1690.10 8 84 3.9E-22 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SAMA_RS11890 55ba306335af9e80b9d6e4bf2631b45a 102 PANTHER PTHR30531 7 94 3.0E-34 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SAMA_RS11890 55ba306335af9e80b9d6e4bf2631b45a 102 SUPERFAMILY SSF160544 8 84 2.88E-21 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 Pfam PF05193 Peptidase M16 inactive domain 194 369 3.4E-37 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 PANTHER PTHR11851:SF136 3 440 9.8E-112 T 22-04-2016 SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 Gene3D G3DSA:3.30.830.10 28 249 8.0E-57 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 PANTHER PTHR11851 3 440 9.8E-112 T 22-04-2016 SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 SUPERFAMILY SSF63411 254 442 2.87E-41 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 Gene3D G3DSA:3.30.830.10 250 435 1.8E-29 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 Pfam PF00675 Insulinase (Peptidase family M16) 43 181 9.3E-23 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SAMA_RS17915 84b1e0f7dcc5491a055b282dbef27d66 443 SUPERFAMILY SSF63411 27 242 4.03E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 SMART SM01323 19 103 2.3E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 8.0E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 8.0E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 PANTHER PTHR33909 1 111 1.3E-35 T 22-04-2016 SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 PANTHER PTHR33909:SF1 1 111 1.3E-35 T 22-04-2016 SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 103 8.1E-31 T 22-04-2016 IPR003849 Preprotein translocase YajC SAMA_RS11445 8fa34d4dae138c081a38852db1c010af 111 Pfam PF02699 Preprotein translocase subunit 23 100 7.8E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC SAMA_RS10515 c738470711b89e30145d4ba778996046 202 Pfam PF01810 LysE type translocator 18 194 3.0E-18 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS10515 c738470711b89e30145d4ba778996046 202 PANTHER PTHR30086 1 194 1.5E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SAMA_RS10515 c738470711b89e30145d4ba778996046 202 PANTHER PTHR30086:SF12 1 194 1.5E-48 T 22-04-2016 SAMA_RS14930 9ab91125622d75409d49a861b2ec0b69 122 Pfam PF10627 Curli assembly protein CsgE 16 117 7.5E-37 T 22-04-2016 IPR018900 Curli assembly protein CsgE SAMA_RS03125 094169499d5f5f505ebb450827a53623 252 Pfam PF03929 PepSY-associated TM region 12 245 6.9E-16 T 22-04-2016 IPR005625 PepSY-associated TM protein SAMA_RS09110 570d3df9179b60160673703c39a952b3 252 SMART SM01144 31 226 4.4E-65 T 22-04-2016 IPR005636 DTW SAMA_RS09110 570d3df9179b60160673703c39a952b3 252 Pfam PF03942 DTW domain 34 220 3.4E-38 T 22-04-2016 IPR005636 DTW SAMA_RS09110 570d3df9179b60160673703c39a952b3 252 PANTHER PTHR21392:SF1 7 229 2.2E-100 T 22-04-2016 SAMA_RS09110 570d3df9179b60160673703c39a952b3 252 PANTHER PTHR21392 7 229 2.2E-100 T 22-04-2016 SAMA_RS12880 45cf239c8d139dc54a9ae28fda783a14 169 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 139 5.3E-8 T 22-04-2016 IPR010323 Protein of unknown function DUF924 SAMA_RS12880 45cf239c8d139dc54a9ae28fda783a14 169 SUPERFAMILY SSF48452 2 138 8.34E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 Gene3D G3DSA:3.40.50.300 1 206 9.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 Pfam PF13476 AAA domain 4 211 6.5E-16 T 22-04-2016 SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 PIRSF PIRSF003128 1 554 1.9E-161 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 SUPERFAMILY SSF52540 1 217 5.65E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.7E-173 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 SUPERFAMILY SSF52540 4 50 1.69E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 SUPERFAMILY SSF52540 297 506 1.69E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS05350 bd7520285379d9b3fea8c4523735e6ea 554 PANTHER PTHR11059 2 552 4.7E-182 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 242 257 4.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 162 179 4.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 219 229 4.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 230 241 4.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PANTHER PTHR30487 3 39 3.8E-110 T 22-04-2016 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PANTHER PTHR30487 76 302 3.8E-110 T 22-04-2016 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PANTHER PTHR30487:SF0 3 39 3.8E-110 T 22-04-2016 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 PANTHER PTHR30487:SF0 76 302 3.8E-110 T 22-04-2016 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 Pfam PF01478 Type IV leader peptidase family 154 262 4.3E-26 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SAMA_RS02000 49279e88f266c515c111419bf515dd85 304 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 143 2.6E-30 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 Pfam PF07690 Major Facilitator Superfamily 23 247 1.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 PANTHER PTHR19432:SF35 11 241 1.8E-99 T 22-04-2016 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 PANTHER PTHR19432:SF35 286 509 1.8E-99 T 22-04-2016 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 SUPERFAMILY SSF103473 296 505 1.22E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 SUPERFAMILY SSF103473 17 225 1.22E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 Gene3D G3DSA:1.20.1250.20 318 506 1.1E-12 T 22-04-2016 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 Gene3D G3DSA:1.20.1250.20 17 222 2.2E-27 T 22-04-2016 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 PANTHER PTHR19432 11 241 1.8E-99 T 22-04-2016 SAMA_RS08655 782e38026f4b069576cb9118a1eb5021 518 PANTHER PTHR19432 286 509 1.8E-99 T 22-04-2016 SAMA_RS14680 d096d09c500c52c717455d7a8cec7c36 171 Pfam PF10029 Predicted periplasmic protein (DUF2271) 25 159 3.1E-46 T 22-04-2016 IPR014469 Protein of unknown function DUF2271 SAMA_RS14680 d096d09c500c52c717455d7a8cec7c36 171 PIRSF PIRSF014995 1 168 3.4E-60 T 22-04-2016 IPR014469 Protein of unknown function DUF2271 SAMA_RS17675 e287849420844e524093b3efcbf3b9c8 105 SMART SM00450 13 100 1.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS17675 e287849420844e524093b3efcbf3b9c8 105 Pfam PF00581 Rhodanese-like domain 15 96 6.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS17675 e287849420844e524093b3efcbf3b9c8 105 SUPERFAMILY SSF52821 12 94 4.19E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS17675 e287849420844e524093b3efcbf3b9c8 105 Gene3D G3DSA:3.40.250.10 12 96 2.0E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SAMA_RS15330 2dcd5e806bdddc361235f6798dcd690b 230 Pfam PF06197 Protein of unknown function (DUF998) 62 201 3.1E-7 T 22-04-2016 IPR009339 Protein of unknown function DUF998 SAMA_RS14025 a836e5931bee33ca47f214240c854c04 58 SUPERFAMILY SSF46955 4 52 1.53E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain SAMA_RS14025 a836e5931bee33ca47f214240c854c04 58 Pfam PF12728 Helix-turn-helix domain 5 52 5.1E-10 T 22-04-2016 SAMA_RS16685 70a606b6aa04f78b64941cd6dbcd9c8b 205 Pfam PF02036 SCP-2 sterol transfer family 26 114 9.7E-15 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS16685 70a606b6aa04f78b64941cd6dbcd9c8b 205 PANTHER PTHR38693:SF1 1 205 3.6E-40 T 22-04-2016 SAMA_RS16685 70a606b6aa04f78b64941cd6dbcd9c8b 205 SUPERFAMILY SSF55718 27 119 8.83E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain SAMA_RS16685 70a606b6aa04f78b64941cd6dbcd9c8b 205 PANTHER PTHR38693 1 205 3.6E-40 T 22-04-2016 SAMA_RS09130 970f9eae6f443f1c0bac12b98479cf0e 335 Pfam PF11279 Protein of unknown function (DUF3080) 14 324 6.0E-51 T 22-04-2016 IPR021431 Protein of unknown function DUF3080 SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 PANTHER PTHR30097:SF6 55 398 1.3E-85 T 22-04-2016 SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 SUPERFAMILY SSF111369 110 321 5.36E-13 T 22-04-2016 SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 Gene3D G3DSA:2.40.50.100 111 144 4.6E-10 T 22-04-2016 SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 Gene3D G3DSA:2.40.50.100 213 247 4.6E-10 T 22-04-2016 SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 100 316 1.9E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SAMA_RS16615 497e59b19b08e57cd109baded82e8689 401 PANTHER PTHR30097 55 398 1.3E-85 T 22-04-2016 SAMA_RS16255 e647eaf11a0fa171f6e8374919667f96 158 Gene3D G3DSA:1.10.490.10 38 156 2.4E-33 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SAMA_RS16255 e647eaf11a0fa171f6e8374919667f96 158 SUPERFAMILY SSF46458 38 155 3.28E-36 T 22-04-2016 IPR009050 Globin-like SAMA_RS16255 e647eaf11a0fa171f6e8374919667f96 158 Pfam PF01152 Bacterial-like globin 43 155 3.9E-15 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SAMA_RS16255 e647eaf11a0fa171f6e8374919667f96 158 PANTHER PTHR10681 32 156 2.3E-18 T 22-04-2016 SAMA_RS13360 82e39a76f8e52b0f56247999bbdea1b1 412 PANTHER PTHR34289:SF3 1 411 7.5E-107 T 22-04-2016 SAMA_RS13360 82e39a76f8e52b0f56247999bbdea1b1 412 Pfam PF05684 Protein of unknown function (DUF819) 15 409 1.1E-103 T 22-04-2016 IPR008537 Protein of unknown function DUF819 SAMA_RS13360 82e39a76f8e52b0f56247999bbdea1b1 412 PANTHER PTHR34289 1 411 7.5E-107 T 22-04-2016 SAMA_RS03400 45bb7d1057c5616f471a99018d112063 325 SMART SM00320 66 106 140.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SAMA_RS03400 45bb7d1057c5616f471a99018d112063 325 SMART SM00320 148 187 5.6E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SAMA_RS03400 45bb7d1057c5616f471a99018d112063 325 SMART SM00320 190 228 7.1 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SAMA_RS03400 45bb7d1057c5616f471a99018d112063 325 SUPERFAMILY SSF50998 23 283 3.37E-33 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS03400 45bb7d1057c5616f471a99018d112063 325 Gene3D G3DSA:2.130.10.10 42 324 1.3E-29 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SAMA_RS06530 e165af855c1aced579d1f77e176eba0b 234 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 229 1.8E-55 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 SAMA_RS06530 e165af855c1aced579d1f77e176eba0b 234 PANTHER PTHR38108:SF1 2 234 4.1E-47 T 22-04-2016 SAMA_RS06530 e165af855c1aced579d1f77e176eba0b 234 PANTHER PTHR38108 2 234 4.1E-47 T 22-04-2016 SAMA_RS05895 9961409f04becdcc58432c1d249e1338 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 6.8E-28 T 22-04-2016 IPR021250 Protein of unknown function DUF2789 SAMA_RS08860 d680faef33d33227d990dc7361debbd5 460 PANTHER PTHR33451:SF7 7 460 3.0E-156 T 22-04-2016 SAMA_RS08860 d680faef33d33227d990dc7361debbd5 460 Pfam PF03553 Na+/H+ antiporter family 153 459 2.3E-31 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SAMA_RS08860 d680faef33d33227d990dc7361debbd5 460 PANTHER PTHR33451 7 460 3.0E-156 T 22-04-2016 SAMA_RS11385 dd8a16769d06e2c26b35a1e4c2815b0f 238 PIRSF PIRSF029033 2 238 1.3E-81 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein SAMA_RS11385 dd8a16769d06e2c26b35a1e4c2815b0f 238 Pfam PF04402 Protein of unknown function (DUF541) 41 209 3.3E-16 T 22-04-2016 IPR007497 Protein of unknown function DUF541 SAMA_RS18980 0368a3414d4b00166de42077143726ce 127 Pfam PF03899 ATP synthase I chain 15 111 8.0E-19 T 22-04-2016 IPR005598 ATP synthase protein I SAMA_RS04015 6675d3c5430b9a1ae5f0ce969a84b109 181 PIRSF PIRSF006135 1 173 3.9E-51 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SAMA_RS04015 6675d3c5430b9a1ae5f0ce969a84b109 181 Gene3D G3DSA:3.40.50.300 2 171 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS04015 6675d3c5430b9a1ae5f0ce969a84b109 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 170 9.4E-56 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SAMA_RS04015 6675d3c5430b9a1ae5f0ce969a84b109 181 PANTHER PTHR34848 1 173 5.0E-68 T 22-04-2016 SAMA_RS04015 6675d3c5430b9a1ae5f0ce969a84b109 181 SUPERFAMILY SSF52540 2 171 1.06E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS06165 9fb5465cb0ff3824c1dd8bef0970e459 118 Pfam PF01844 HNH endonuclease 36 84 4.6E-11 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SAMA_RS06165 9fb5465cb0ff3824c1dd8bef0970e459 118 SMART SM00507 24 79 0.0032 T 22-04-2016 IPR003615 HNH nuclease SAMA_RS04210 4a7eb91d00a30510536c7be2c6eeb7c4 211 Pfam PF07290 Protein of unknown function (DUF1449) 10 208 8.1E-72 T 22-04-2016 IPR010840 Protein of unknown function DUF1449 SAMA_RS17730 a73037565918a2b14e83eb0cf30ba238 296 SUPERFAMILY SSF53850 61 246 8.32E-6 T 22-04-2016 SAMA_RS16780 ecae9f9f9bf786b6f67c922861af67a7 243 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 112 216 3.5E-11 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SAMA_RS16780 ecae9f9f9bf786b6f67c922861af67a7 243 Gene3D G3DSA:1.20.950.10 12 236 2.3E-78 T 22-04-2016 SAMA_RS16780 ecae9f9f9bf786b6f67c922861af67a7 243 SUPERFAMILY SSF81343 7 239 4.06E-65 T 22-04-2016 SAMA_RS16780 ecae9f9f9bf786b6f67c922861af67a7 243 PIRSF PIRSF000177 13 234 1.0E-55 T 22-04-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 SAMA_RS10230 af95a99239e59edb216e0be88e96aa5b 135 Gene3D G3DSA:3.40.50.10600 12 132 2.0E-27 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS10230 af95a99239e59edb216e0be88e96aa5b 135 Pfam PF11964 SpoIIAA-like 26 131 2.0E-13 T 22-04-2016 IPR021866 SpoIIAA-like SAMA_RS10230 af95a99239e59edb216e0be88e96aa5b 135 SUPERFAMILY SSF52091 13 131 1.02E-27 T 22-04-2016 IPR002645 STAS domain SAMA_RS14650 50a3c03ede69368a898c3db7bccdab28 175 Pfam PF13590 Domain of unknown function (DUF4136) 22 172 1.3E-21 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 SAMA_RS00535 59b4455fe3477c3d5bc44f2585433f7a 240 Gene3D G3DSA:3.90.550.10 2 235 4.2E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS00535 59b4455fe3477c3d5bc44f2585433f7a 240 PIRSF PIRSF028162 1 240 1.7E-91 T 22-04-2016 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted SAMA_RS00535 59b4455fe3477c3d5bc44f2585433f7a 240 SUPERFAMILY SSF53448 2 235 8.81E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SAMA_RS10580 24bc1ed81e5a0052963c9f89c368fc81 290 PIRSF PIRSF015558 1 284 2.2E-86 T 22-04-2016 IPR016634 Transcription regulator, DeoR type, predicted SAMA_RS10580 24bc1ed81e5a0052963c9f89c368fc81 290 Pfam PF13280 WYL domain 118 191 1.0E-9 T 22-04-2016 IPR026881 WYL domain SAMA_RS12985 e159d6250671e0d5b7bef4084d45b844 108 PANTHER PTHR38778 2 108 5.6E-49 T 22-04-2016 SAMA_RS12985 e159d6250671e0d5b7bef4084d45b844 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 2.5E-40 T 22-04-2016 IPR007416 Protein of unknown function DUF469 SAMA_RS12985 e159d6250671e0d5b7bef4084d45b844 108 PANTHER PTHR38778:SF1 2 108 5.6E-49 T 22-04-2016 SAMA_RS02595 46db10076fa40edf50dd5ad15d9b10c2 91 Pfam PF03889 Domain of unknown function 22 58 8.9E-22 T 22-04-2016 IPR005589 Protein of unknown function DUF331 SAMA_RS14970 3abf55e8ddb4718e18c1cd009deaf00e 222 Pfam PF12697 Alpha/beta hydrolase family 4 125 2.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SAMA_RS14970 3abf55e8ddb4718e18c1cd009deaf00e 222 Gene3D G3DSA:3.40.50.1820 4 216 5.2E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS14970 3abf55e8ddb4718e18c1cd009deaf00e 222 SUPERFAMILY SSF53474 4 211 2.13E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SAMA_RS14970 3abf55e8ddb4718e18c1cd009deaf00e 222 PANTHER PTHR37946 4 216 1.6E-15 T 22-04-2016 SAMA_RS14970 3abf55e8ddb4718e18c1cd009deaf00e 222 PANTHER PTHR37946:SF1 4 216 1.6E-15 T 22-04-2016 SAMA_RS15260 72ff50c8b9280a1a1c8498c485e47cfd 715 Gene3D G3DSA:3.40.50.300 141 212 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15260 72ff50c8b9280a1a1c8498c485e47cfd 715 Gene3D G3DSA:3.40.50.300 46 67 1.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15260 72ff50c8b9280a1a1c8498c485e47cfd 715 SUPERFAMILY SSF52540 43 231 1.03E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS15260 72ff50c8b9280a1a1c8498c485e47cfd 715 Pfam PF07693 KAP family P-loop domain 22 308 2.2E-36 T 22-04-2016 IPR011646 KAP family P-loop domain SAMA_RS15260 72ff50c8b9280a1a1c8498c485e47cfd 715 PANTHER PTHR22674 157 268 3.6E-12 T 22-04-2016 SAMA_RS10475 238fb68a5812d30a6b440dff2824775b 333 PANTHER PTHR41292 59 308 2.1E-14 T 22-04-2016 SAMA_RS10475 238fb68a5812d30a6b440dff2824775b 333 PANTHER PTHR41292:SF1 59 308 2.1E-14 T 22-04-2016 SAMA_RS10475 238fb68a5812d30a6b440dff2824775b 333 Pfam PF10978 Protein of unknown function (DUF2785) 141 308 1.1E-39 T 22-04-2016 IPR021247 Protein of unknown function DUF2785 SAMA_RS11270 f4c11ebde5a3a53481f75f2098faac6e 374 Pfam PF01513 ATP-NAD kinase 7 367 4.4E-43 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SAMA_RS11270 f4c11ebde5a3a53481f75f2098faac6e 374 PIRSF PIRSF016907 3 371 1.0E-137 T 22-04-2016 IPR011386 Putative ATP-NAD kinase SAMA_RS11270 f4c11ebde5a3a53481f75f2098faac6e 374 PANTHER PTHR40697:SF1 3 374 1.7E-218 T 22-04-2016 SAMA_RS11270 f4c11ebde5a3a53481f75f2098faac6e 374 SUPERFAMILY SSF111331 70 139 8.94E-7 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SAMA_RS11270 f4c11ebde5a3a53481f75f2098faac6e 374 PANTHER PTHR40697 3 374 1.7E-218 T 22-04-2016 SAMA_RS05725 53f6e8b68801d1f74f3fd60b24d96ee3 202 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 196 3.6E-28 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS05725 53f6e8b68801d1f74f3fd60b24d96ee3 202 Gene3D G3DSA:3.90.850.10 11 188 5.5E-47 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS05725 53f6e8b68801d1f74f3fd60b24d96ee3 202 SUPERFAMILY SSF56529 12 197 2.75E-48 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SAMA_RS05725 53f6e8b68801d1f74f3fd60b24d96ee3 202 PANTHER PTHR11820 13 176 1.3E-46 T 22-04-2016 SAMA_RS12160 20277353cc80d7ca24901e4a3daa0eff 151 PIRSF PIRSF028687 1 151 1.1E-58 T 22-04-2016 IPR007293 Flagellar protein FlgP SAMA_RS12160 20277353cc80d7ca24901e4a3daa0eff 151 Pfam PF02169 LPP20 lipoprotein 27 128 8.3E-11 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SAMA_RS17750 4dd04511498db7c2239fdce1d1df6d9d 109 Pfam PF11804 Protein of unknown function (DUF3325) 4 103 1.6E-18 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 SAMA_RS03025 81507db2bcf0a205c09ea596e26977a3 556 Pfam PF03961 Protein of unknown function (DUF342) 85 547 2.0E-149 T 22-04-2016 IPR005646 Protein of unknown function DUF342 SAMA_RS03025 81507db2bcf0a205c09ea596e26977a3 556 Gene3D G3DSA:2.160.20.70 278 313 4.0E-5 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SAMA_RS03025 81507db2bcf0a205c09ea596e26977a3 556 PANTHER PTHR38032 1 556 2.0E-134 T 22-04-2016 SAMA_RS03025 81507db2bcf0a205c09ea596e26977a3 556 SUPERFAMILY SSF63848 282 313 6.67E-7 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SAMA_RS05615 7e9f8debc4e8c042beadc847c23e9f9c 394 Gene3D G3DSA:1.10.3210.10 211 351 8.3E-8 T 22-04-2016 IPR006674 HD domain SAMA_RS05615 7e9f8debc4e8c042beadc847c23e9f9c 394 Pfam PF13487 HD domain 294 338 1.0E-11 T 22-04-2016 SAMA_RS05615 7e9f8debc4e8c042beadc847c23e9f9c 394 SUPERFAMILY SSF109604 190 384 3.77E-18 T 22-04-2016 SAMA_RS02570 df4ec84319839914dce2d74e075e08b1 375 PANTHER PTHR30294:SF19 1 365 5.9E-104 T 22-04-2016 SAMA_RS02570 df4ec84319839914dce2d74e075e08b1 375 Pfam PF12698 ABC-2 family transporter protein 20 353 2.4E-44 T 22-04-2016 SAMA_RS02570 df4ec84319839914dce2d74e075e08b1 375 Gene3D G3DSA:3.40.1710.10 46 173 4.9E-6 T 22-04-2016 SAMA_RS02570 df4ec84319839914dce2d74e075e08b1 375 PANTHER PTHR30294 1 365 5.9E-104 T 22-04-2016 SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 PANTHER PTHR33209:SF2 1 334 2.6E-192 T 22-04-2016 SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 Pfam PF01343 Peptidase family S49 150 297 2.3E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 Pfam PF08496 Peptidase family S49 N-terminal 2 147 3.7E-54 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 SUPERFAMILY SSF52096 88 198 9.27E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 SUPERFAMILY SSF52096 229 288 9.27E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 Gene3D G3DSA:3.90.226.10 85 194 3.8E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 Gene3D G3DSA:3.90.226.10 260 296 3.8E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SAMA_RS11075 a00863291827a7d5e0953be23bde346e 337 PANTHER PTHR33209 1 334 2.6E-192 T 22-04-2016 SAMA_RS13910 fff703b256dab8547fbb143655af5eeb 300 SUPERFAMILY SSF103515 108 233 1.27E-5 T 22-04-2016 IPR005546 Autotransporter beta-domain SAMA_RS04860 d2e60b703d620b4341ec153b39374f2e 1201 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SAMA_RS04860 d2e60b703d620b4341ec153b39374f2e 1201 Pfam PF05567 Neisseria PilC beta-propeller domain 711 952 1.0E-26 T 22-04-2016 IPR008707 PilC beta-propeller domain SAMA_RS04860 d2e60b703d620b4341ec153b39374f2e 1201 SUPERFAMILY SSF50998 1038 1123 1.77E-7 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS04860 d2e60b703d620b4341ec153b39374f2e 1201 SUPERFAMILY SSF50998 688 759 1.77E-7 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS04860 d2e60b703d620b4341ec153b39374f2e 1201 SUPERFAMILY SSF50998 784 950 1.77E-7 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SAMA_RS12465 224eac79045c752d1ae6f8b832a10043 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 224 2.2E-23 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS12465 224eac79045c752d1ae6f8b832a10043 263 SUPERFAMILY SSF53790 2 249 4.84E-30 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SAMA_RS12465 224eac79045c752d1ae6f8b832a10043 263 Gene3D G3DSA:3.40.1010.10 2 124 6.8E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SAMA_RS00650 7f86ac5297b2a99033f42c6baab347ee 243 PANTHER PTHR35936 1 233 3.1E-27 T 22-04-2016 SAMA_RS00650 7f86ac5297b2a99033f42c6baab347ee 243 SUPERFAMILY SSF53850 21 234 1.74E-16 T 22-04-2016 SAMA_RS00650 7f86ac5297b2a99033f42c6baab347ee 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 231 5.5E-6 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SAMA_RS06990 2da76f21eefa6a6bd36ca72b3f486f0d 61 PANTHER PTHR33505 1 52 1.5E-21 T 22-04-2016 SAMA_RS06990 2da76f21eefa6a6bd36ca72b3f486f0d 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 25.382 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SAMA_RS06990 2da76f21eefa6a6bd36ca72b3f486f0d 61 Pfam PF03966 Trm112p-like protein 4 43 1.5E-10 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SAMA_RS06990 2da76f21eefa6a6bd36ca72b3f486f0d 61 SUPERFAMILY SSF158997 1 57 4.45E-20 T 22-04-2016 SAMA_RS06990 2da76f21eefa6a6bd36ca72b3f486f0d 61 Gene3D G3DSA:2.20.25.10 10 59 7.3E-23 T 22-04-2016 SAMA_RS13695 8a7cb3f94d84f9ecdb8a09335fc8715f 309 Pfam PF13349 Putative adhesin 35 248 5.2E-13 T 22-04-2016 IPR025164 Putative adhesin SAMA_RS15925 5074d5cde33803f5140c9a2fb9782865 323 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 3 323 3.1E-144 T 22-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 SAMA_RS15925 5074d5cde33803f5140c9a2fb9782865 323 PIRSF PIRSF029693 2 323 5.3E-161 T 22-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 SAMA_RS12680 192a726c9a071e6d4c4566142588a0dd 128 PANTHER PTHR10584 5 66 1.9E-19 T 22-04-2016 SAMA_RS12680 192a726c9a071e6d4c4566142588a0dd 128 Pfam PF04241 Protein of unknown function (DUF423) 19 105 4.2E-30 T 22-04-2016 IPR006696 Protein of unknown function DUF423 SAMA_RS12680 192a726c9a071e6d4c4566142588a0dd 128 PANTHER PTHR10584:SF191 5 66 1.9E-19 T 22-04-2016 SAMA_RS17275 1ef0f1cef5b81546481450a674ddf7ff 86 SUPERFAMILY SSF101744 1 85 2.09E-24 T 22-04-2016 IPR023534 Rof/RNase P-like SAMA_RS17275 1ef0f1cef5b81546481450a674ddf7ff 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 84 1.7E-27 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 SUPERFAMILY SSF103481 192 281 2.88E-14 T 22-04-2016 SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 PANTHER PTHR12715 6 290 2.5E-68 T 22-04-2016 SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 SUPERFAMILY SSF103481 38 136 2.62E-9 T 22-04-2016 SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 PANTHER PTHR12715:SF17 6 290 2.5E-68 T 22-04-2016 SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 Pfam PF00892 EamA-like transporter family 149 281 1.4E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS05755 55626bf69aaeb2dc9c7c18916ab3db91 296 Pfam PF00892 EamA-like transporter family 6 135 1.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SAMA_RS02950 722912d3b2d4eb6bc838fcc8f8931ea7 60 Pfam PF10980 Protein of unknown function (DUF2787) 6 57 4.8E-10 T 22-04-2016 IPR021248 Protein of unknown function DUF2787 SAMA_RS15185 f846a96c1c45148cbc26e1013ddbcc0a 333 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2 47 9.8E-11 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SAMA_RS01470 1637bdec49903f11b8dabae7fffc4a7b 231 PANTHER PTHR36978:SF2 7 229 9.2E-75 T 22-04-2016 SAMA_RS01470 1637bdec49903f11b8dabae7fffc4a7b 231 SUPERFAMILY SSF52540 7 189 1.14E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01470 1637bdec49903f11b8dabae7fffc4a7b 231 PANTHER PTHR36978 7 229 9.2E-75 T 22-04-2016 SAMA_RS03295 df7e698e0bbae9691966700ef3ba8c20 361 SUPERFAMILY SSF56935 66 361 2.44E-32 T 22-04-2016 SAMA_RS03295 df7e698e0bbae9691966700ef3ba8c20 361 Gene3D G3DSA:2.40.160.10 65 186 2.7E-12 T 22-04-2016 IPR023614 Porin domain SAMA_RS03295 df7e698e0bbae9691966700ef3ba8c20 361 Gene3D G3DSA:2.40.160.10 245 341 2.7E-12 T 22-04-2016 IPR023614 Porin domain SAMA_RS14125 533efd29a20579faa0017c1c5eb56a16 131 Pfam PF11456 Protein of unknown function (DUF3019) 33 130 2.5E-22 T 22-04-2016 IPR021559 Protein of unknown function DUF3019 SAMA_RS10700 60c4baf129551648da3f786b25c0dae7 155 Pfam PF05433 Glycine zipper 2TM domain 61 100 5.2E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SAMA_RS10700 60c4baf129551648da3f786b25c0dae7 155 PANTHER PTHR35603 1 155 1.2E-35 T 22-04-2016 SAMA_RS10700 60c4baf129551648da3f786b25c0dae7 155 PANTHER PTHR35603:SF2 1 155 1.2E-35 T 22-04-2016 SAMA_RS03365 75757a6a650bcf33cffd2d55d8e0d677 278 PANTHER PTHR38776 1 102 2.1E-21 T 22-04-2016 SAMA_RS03365 75757a6a650bcf33cffd2d55d8e0d677 278 PANTHER PTHR38776 127 278 2.1E-21 T 22-04-2016 SAMA_RS03365 75757a6a650bcf33cffd2d55d8e0d677 278 Pfam PF06629 MltA-interacting protein MipA 37 278 2.5E-38 T 22-04-2016 IPR010583 MltA-interacting MipA SAMA_RS18710 62e72ea58da64ee2543a7577d1fa2f01 199 PANTHER PTHR14136:SF13 15 185 4.6E-33 T 22-04-2016 SAMA_RS18710 62e72ea58da64ee2543a7577d1fa2f01 199 PANTHER PTHR14136 15 185 4.6E-33 T 22-04-2016 SAMA_RS18710 62e72ea58da64ee2543a7577d1fa2f01 199 Pfam PF13599 Pentapeptide repeats (9 copies) 21 86 1.8E-10 T 22-04-2016 IPR001646 Pentapeptide repeat SAMA_RS18710 62e72ea58da64ee2543a7577d1fa2f01 199 SUPERFAMILY SSF141571 14 197 1.08E-42 T 22-04-2016 SAMA_RS18710 62e72ea58da64ee2543a7577d1fa2f01 199 Pfam PF00805 Pentapeptide repeats (8 copies) 128 163 7.6E-10 T 22-04-2016 IPR001646 Pentapeptide repeat SAMA_RS12185 ba6694f8f0ec4a9ac82c849b39f410da 393 Pfam PF02719 Polysaccharide biosynthesis protein 33 272 6.0E-45 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SAMA_RS12185 ba6694f8f0ec4a9ac82c849b39f410da 393 PANTHER PTHR10366 31 251 8.1E-28 T 22-04-2016 SAMA_RS12185 ba6694f8f0ec4a9ac82c849b39f410da 393 PANTHER PTHR10366:SF376 31 251 8.1E-28 T 22-04-2016 SAMA_RS12185 ba6694f8f0ec4a9ac82c849b39f410da 393 SUPERFAMILY SSF51735 32 273 1.7E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS12185 ba6694f8f0ec4a9ac82c849b39f410da 393 Gene3D G3DSA:3.40.50.720 32 239 2.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SAMA_RS17310 2adaa9f6055126bbcd56a7ade4a8fbb6 102 Pfam PF12305 Protein of unknown function (DUF3630) 6 94 7.8E-36 T 22-04-2016 IPR022080 Protein of unknown function DUF3630 SAMA_RS09400 893e1a9f93acf3dcfe2ee588d6d45caa 271 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 134 268 4.4E-16 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SAMA_RS09400 893e1a9f93acf3dcfe2ee588d6d45caa 271 PANTHER PTHR40572 1 271 3.4E-62 T 22-04-2016 SAMA_RS13610 c00650f0cfede2d87bc6c4dddd176a5a 283 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SAMA_RS13610 c00650f0cfede2d87bc6c4dddd176a5a 283 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 184 1.6E-38 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SAMA_RS13610 c00650f0cfede2d87bc6c4dddd176a5a 283 PANTHER PTHR15362 12 144 7.5E-36 T 22-04-2016 SAMA_RS13610 c00650f0cfede2d87bc6c4dddd176a5a 283 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 80 1.4E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 PANTHER PTHR30332 165 439 8.4E-58 T 22-04-2016 SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 396 410 8.7E-14 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 373 391 8.7E-14 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 282 292 8.7E-14 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 247 271 8.7E-14 T 22-04-2016 IPR001775 GspD/PilQ family SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 Pfam PF00263 Bacterial type II and III secretion system protein 252 408 1.3E-42 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SAMA_RS03725 1448b5815ec8b28763fa2413a502a8fa 439 Pfam PF13629 Pilus formation protein N terminal region 27 95 2.4E-13 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal SAMA_RS13980 a7fd0647fefad60597be8d1a5420aef3 229 Pfam PF04012 PspA/IM30 family 2 228 1.2E-41 T 22-04-2016 IPR007157 PspA/IM30 SAMA_RS13980 a7fd0647fefad60597be8d1a5420aef3 229 PANTHER PTHR31088:SF0 2 229 2.4E-55 T 22-04-2016 SAMA_RS13980 a7fd0647fefad60597be8d1a5420aef3 229 PANTHER PTHR31088 2 229 2.4E-55 T 22-04-2016 SAMA_RS16445 8396b14fa5e41d18bf6d010b2a4bce51 169 Pfam PF14024 Protein of unknown function (DUF4240) 1 127 1.5E-40 T 22-04-2016 IPR025334 Domain of unknown function (DUF4240 SAMA_RS16495 3042883a2e8aaf70e53981590205eb81 451 Pfam PF08014 Domain of unknown function (DUF1704) 40 411 9.0E-132 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 SAMA_RS16495 3042883a2e8aaf70e53981590205eb81 451 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 408 5.0E-131 T 22-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA SAMA_RS16495 3042883a2e8aaf70e53981590205eb81 451 PANTHER PTHR31817:SF4 206 344 1.8E-12 T 22-04-2016 SAMA_RS16495 3042883a2e8aaf70e53981590205eb81 451 SMART SM01154 39 416 4.6E-190 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 SAMA_RS16495 3042883a2e8aaf70e53981590205eb81 451 PANTHER PTHR31817 206 344 1.8E-12 T 22-04-2016 SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 215 4.9E-50 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 Pfam PF01467 Cytidylyltransferase-like 13 189 5.6E-26 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 Gene3D G3DSA:3.40.50.620 10 216 4.9E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 SUPERFAMILY SSF52374 10 216 6.22E-51 T 22-04-2016 SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 PANTHER PTHR39321 6 216 9.5E-37 T 22-04-2016 SAMA_RS13505 4fc1fc7afbe8c32b2080eaa1dabd36f4 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 216 30.24 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SAMA_RS04905 0d4d49ba78da39d55fc2f414dcddd889 230 Pfam PF07277 SapC 8 225 1.4E-72 T 22-04-2016 IPR010836 SapC SAMA_RS01665 d844197905600db43382fbed2af38cf0 171 PANTHER PTHR37816 2 107 2.3E-19 T 22-04-2016 SAMA_RS01665 d844197905600db43382fbed2af38cf0 171 PANTHER PTHR37816:SF1 2 107 2.3E-19 T 22-04-2016 SAMA_RS01665 d844197905600db43382fbed2af38cf0 171 Gene3D G3DSA:3.40.50.300 1 99 5.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS01665 d844197905600db43382fbed2af38cf0 171 SUPERFAMILY SSF52540 1 126 5.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS17430 0b13b37f75315cf25b9eaf9275010d06 163 Pfam PF11158 Protein of unknown function (DUF2938) 8 156 1.6E-64 T 22-04-2016 IPR021329 Protein of unknown function DUF2938 SAMA_RS09690 80203a4db5391c003f6a92482a8d977f 386 Pfam PF12060 Domain of unknown function (DUF3541) 43 262 6.3E-99 T 22-04-2016 IPR021928 Protein of unknown function DUF3541 SAMA_RS15480 62d4e96fbad0124b0b003ba13882e501 386 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 64 376 1.7E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15480 62d4e96fbad0124b0b003ba13882e501 386 Gene3D G3DSA:3.60.10.10 58 384 3.4E-10 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15480 62d4e96fbad0124b0b003ba13882e501 386 SUPERFAMILY SSF56219 299 384 9.93E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS15480 62d4e96fbad0124b0b003ba13882e501 386 SUPERFAMILY SSF56219 33 250 9.93E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SAMA_RS02880 bd41fdb0aff6f63357939a75c1d2ebf5 196 PANTHER PTHR35335:SF1 1 185 1.2E-47 T 22-04-2016 SAMA_RS02880 bd41fdb0aff6f63357939a75c1d2ebf5 196 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 3.1E-35 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SAMA_RS02880 bd41fdb0aff6f63357939a75c1d2ebf5 196 PANTHER PTHR35335 1 185 1.2E-47 T 22-04-2016 SAMA_RS18805 f0b3457307e86d101737dea447f12654 302 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 55 1.2E-7 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 SAMA_RS18805 f0b3457307e86d101737dea447f12654 302 Pfam PF12727 PBP superfamily domain 95 274 2.7E-42 T 22-04-2016 IPR024370 PBP domain SAMA_RS18805 f0b3457307e86d101737dea447f12654 302 Pfam PF12728 Helix-turn-helix domain 9 56 4.0E-11 T 22-04-2016 SAMA_RS18805 f0b3457307e86d101737dea447f12654 302 PANTHER PTHR38431 1 300 1.4E-55 T 22-04-2016 SAMA_RS15905 0ade9668bdea87b0a63b69984efb77b5 144 PANTHER PTHR38774 2 135 2.3E-43 T 22-04-2016 SAMA_RS15905 0ade9668bdea87b0a63b69984efb77b5 144 PANTHER PTHR38774:SF1 2 135 2.3E-43 T 22-04-2016 SAMA_RS15905 0ade9668bdea87b0a63b69984efb77b5 144 Pfam PF06853 Protein of unknown function (DUF1249) 28 137 7.7E-31 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 SAMA_RS18495 c0f461c3e3aab581445aeb4f31f1253a 535 PANTHER PTHR30282 11 535 2.3E-265 T 22-04-2016 SAMA_RS18495 c0f461c3e3aab581445aeb4f31f1253a 535 Pfam PF03806 AbgT putative transporter family 25 533 2.8E-217 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 SAMA_RS18495 c0f461c3e3aab581445aeb4f31f1253a 535 PANTHER PTHR30282:SF0 11 535 2.3E-265 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 SAMA_RS02925 574c15d6853a89c377c91972df7fc714 67 Pfam PF11346 Protein of unknown function (DUF3149) 29 66 1.6E-15 T 22-04-2016 IPR021494 Protein of unknown function DUF3149 SAMA_RS01515 4818a1b3410af0f7e95ccda5e5cd6307 599 Pfam PF10592 AIPR protein 246 563 4.0E-80 T 22-04-2016 IPR018891 Abortive bacteriophage infection, resistance SAMA_RS03380 c8ca8e823bbd237ecc5664796a175f1e 201 Pfam PF13036 Peptidoglycan-synthase activator LpoB 13 190 2.5E-67 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB SAMA_RS03380 c8ca8e823bbd237ecc5664796a175f1e 201 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 9 192 2.1E-75 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB SAMA_RS03380 c8ca8e823bbd237ecc5664796a175f1e 201 PANTHER PTHR40593 3 201 1.4E-97 T 22-04-2016 SAMA_RS19235 91755b4cb55140436c4fcee37e801aa4 493 Pfam PF13401 AAA domain 8 130 2.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SAMA_RS19235 91755b4cb55140436c4fcee37e801aa4 493 SUPERFAMILY SSF52540 10 202 9.37E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS19235 91755b4cb55140436c4fcee37e801aa4 493 Gene3D G3DSA:3.40.50.300 7 85 3.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SAMA_RS14920 b335e5af4241464b70438078e3b292b4 261 Pfam PF03783 Curli production assembly/transport component CsgG 42 248 1.9E-80 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 SAMA_RS03330 ff9926a5f123cb83ff728764a4c098e5 140 Gene3D G3DSA:3.30.1330.60 20 111 6.5E-6 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS03330 ff9926a5f123cb83ff728764a4c098e5 140 SUPERFAMILY SSF103088 20 100 2.35E-5 T 22-04-2016 IPR006665 OmpA-like domain SAMA_RS13715 c2b1f7db5eeeff7a094f84c703e087dd 167 Pfam PF14590 Domain of unknown function (DUF4447) 1 166 9.4E-101 T 22-04-2016 IPR027909 Protein of unknown function DUF4447 SAMA_RS13715 c2b1f7db5eeeff7a094f84c703e087dd 167 SUPERFAMILY SSF47413 5 166 8.44E-91 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SAMA_RS13715 c2b1f7db5eeeff7a094f84c703e087dd 167 Gene3D G3DSA:1.10.3100.10 1 166 1.7E-97 T 22-04-2016 IPR027910 YdiL-like domain SAMA_RS16385 24b9a4cd7c13cfa7853b2ad47eb1642f 397 SUPERFAMILY SSF56935 46 385 3.66E-24 T 22-04-2016 SAMA_RS16385 24b9a4cd7c13cfa7853b2ad47eb1642f 397 Gene3D G3DSA:2.40.160.10 36 368 4.8E-16 T 22-04-2016 IPR023614 Porin domain SAMA_RS04585 18e01db3cce9be536a81e29072b8ad2e 159 PIRSF PIRSF004923 1 153 6.8E-41 T 22-04-2016 IPR026268 Protein RseC SAMA_RS04585 18e01db3cce9be536a81e29072b8ad2e 159 PANTHER PTHR35867:SF1 2 157 3.3E-33 T 22-04-2016 SAMA_RS04585 18e01db3cce9be536a81e29072b8ad2e 159 PANTHER PTHR35867 2 157 3.3E-33 T 22-04-2016 SAMA_RS04585 18e01db3cce9be536a81e29072b8ad2e 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 9 143 4.4E-30 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC SAMA_RS18435 d72b9003316a04301fb838058a7b57b0 176 PANTHER PTHR12475:SF7 1 174 3.1E-97 T 22-04-2016 SAMA_RS18435 d72b9003316a04301fb838058a7b57b0 176 PANTHER PTHR12475 1 174 3.1E-97 T 22-04-2016 SAMA_RS18435 d72b9003316a04301fb838058a7b57b0 176 Gene3D G3DSA:3.10.129.10 28 147 7.5E-18 T 22-04-2016 IPR029069 HotDog domain SAMA_RS18435 d72b9003316a04301fb838058a7b57b0 176 SUPERFAMILY SSF54637 28 165 2.45E-28 T 22-04-2016 IPR029069 HotDog domain SAMA_RS18435 d72b9003316a04301fb838058a7b57b0 176 Pfam PF13279 Thioesterase-like superfamily 34 164 6.3E-26 T 22-04-2016 SAMA_RS02610 7f194a7e45492770de549f2b32eef60d 235 PANTHER PTHR34387 5 235 6.6E-48 T 22-04-2016 SAMA_RS02610 7f194a7e45492770de549f2b32eef60d 235 PANTHER PTHR34387:SF1 5 235 6.6E-48 T 22-04-2016 SAMA_RS02610 7f194a7e45492770de549f2b32eef60d 235 Pfam PF04402 Protein of unknown function (DUF541) 33 231 3.0E-40 T 22-04-2016 IPR007497 Protein of unknown function DUF541 SAMA_RS12155 e0df197579601992fde7f422678c3140 144 Gene3D G3DSA:1.20.58.300 2 116 3.8E-16 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SAMA_RS12155 e0df197579601992fde7f422678c3140 144 SUPERFAMILY SSF140566 1 116 3.01E-21 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SAMA_RS12155 e0df197579601992fde7f422678c3140 144 Pfam PF05130 FlgN protein 1 134 1.9E-27 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SAMA_RS12470 70dcb3c1b138da6990e892eb4429a17a 163 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 115 32.958 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE SAMA_RS12470 70dcb3c1b138da6990e892eb4429a17a 163 Pfam PF04355 SmpA / OmlA family 38 107 2.5E-23 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SAMA_RS12470 70dcb3c1b138da6990e892eb4429a17a 163 PANTHER PTHR37482 3 163 3.0E-51 T 22-04-2016 SAMA_RS12470 70dcb3c1b138da6990e892eb4429a17a 163 PANTHER PTHR37482:SF1 3 163 3.0E-51 T 22-04-2016 SAMA_RS05875 1832d00d6e3257f231b4a0e6147cda78 215 Hamap MF_01104 Protein Syd [syd]. 1 182 34.649 T 22-04-2016 IPR009948 Syd GO:0009898 SAMA_RS05875 1832d00d6e3257f231b4a0e6147cda78 215 Pfam PF07348 Syd protein (SUKH-2) 5 180 1.6E-60 T 22-04-2016 IPR009948 Syd GO:0009898 SAMA_RS16565 bfb1f92d5891a31ff72268a6e1f10e8f 579 Pfam PF11853 Protein of unknown function (DUF3373) 1 579 9.2E-170 T 22-04-2016 IPR021803 Protein of unknown function DUF3373 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 5.5E-17 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 401 2.5E-5 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 401 1.8E-99 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 PANTHER PTHR30244 228 401 1.1E-86 T 22-04-2016 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 PANTHER PTHR30244 1 185 1.1E-86 T 22-04-2016 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 Gene3D G3DSA:1.20.1330.10 306 353 1.2E-14 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 Gene3D G3DSA:1.20.1330.10 53 168 1.2E-14 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 PANTHER PTHR30244:SF5 228 401 1.1E-86 T 22-04-2016 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 PANTHER PTHR30244:SF5 1 185 1.1E-86 T 22-04-2016 SAMA_RS12080 b15723b9646d6c7afbf771166d6f9e86 401 SUPERFAMILY SSF64518 1 401 3.4E-77 T 22-04-2016 SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 Gene3D G3DSA:1.10.3820.10 242 316 4.4E-7 T 22-04-2016 SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 Gene3D G3DSA:1.10.3820.10 174 229 6.8E-5 T 22-04-2016 SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 Gene3D G3DSA:1.10.3820.10 462 625 4.4E-10 T 22-04-2016 SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 62 636 4.9E-123 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 SUPERFAMILY SSF48695 181 319 1.83E-41 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS06340 e1e001b4f9f8bc9a9b05a6e046acfecd 639 SUPERFAMILY SSF48695 449 624 1.83E-41 T 22-04-2016 IPR011031 Multihaem cytochrome SAMA_RS16340 794432b2e646de83fa4af75006c269a4 288 Pfam PF12048 Protein of unknown function (DUF3530) 22 279 9.8E-50 T 22-04-2016 IPR022529 Protein of unknown function DUF3530 SAMA_RS18485 bd103cd438e1403412a83883442a1f58 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.741 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SAMA_RS18485 bd103cd438e1403412a83883442a1f58 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 4.1E-51 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SAMA_RS18485 bd103cd438e1403412a83883442a1f58 149 PANTHER PTHR35146:SF1 1 147 1.8E-56 T 22-04-2016 SAMA_RS18485 bd103cd438e1403412a83883442a1f58 149 PANTHER PTHR35146 1 147 1.8E-56 T 22-04-2016 SAMA_RS05370 cdb55afe0389a91c3f6e28e754838e08 201 Pfam PF04222 Protein of unknown function (DUF416) 7 197 1.1E-70 T 22-04-2016 IPR007338 Protein of unknown function DUF416 SAMA_RS05370 cdb55afe0389a91c3f6e28e754838e08 201 Gene3D G3DSA:1.20.1590.10 4 198 9.3E-75 T 22-04-2016 IPR023381 YP001051499.1-like domain SAMA_RS05560 6138fdf068d42a49e53dd0ef0c286c5a 203 SUPERFAMILY SSF53955 8 167 2.21E-22 T 22-04-2016 IPR023346 Lysozyme-like domain SAMA_RS05560 6138fdf068d42a49e53dd0ef0c286c5a 203 Gene3D G3DSA:1.10.530.10 47 160 1.4E-5 T 22-04-2016 SAMA_RS04465 577b640e8197088240868ad9ac8b0c71 125 Pfam PF11026 Protein of unknown function (DUF2721) 6 118 3.8E-31 T 22-04-2016 IPR021279 Protein of unknown function DUF2721 SAMA_RS08970 a85cea1a1a9003df9be49541291eb296 105 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 59 5.0E-29 T 22-04-2016 SAMA_RS10555 4498b5c8f70b00ff8a56f1add4d13f14 76 Pfam PF11869 Protein of unknown function (DUF3389) 1 72 4.1E-27 T 22-04-2016 IPR021811 Protein of unknown function DUF3389 SAMA_RS14795 451ada4603f8feeabe354b5de837b97d 106 Pfam PF11342 Protein of unknown function (DUF3144) 9 82 6.1E-28 T 22-04-2016 IPR021490 Protein of unknown function DUF3144 SAMA_RS11820 8f3e6b468e595584fbdb17f86e053637 346 SUPERFAMILY SSF53756 46 341 1.57E-6 T 22-04-2016 SAMA_RS15305 e1631ad78db0cb0b86f439ddd5b2a90b 120 Pfam PF09722 Protein of unknown function (DUF2384) 70 118 2.5E-15 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 SAMA_RS14630 692775b29f22099ff401212b7505e40b 133 Pfam PF11456 Protein of unknown function (DUF3019) 32 132 6.2E-26 T 22-04-2016 IPR021559 Protein of unknown function DUF3019 SAMA_RS18630 a801a80e97fca55b6e057977486b7804 201 Pfam PF09997 Predicted membrane protein (DUF2238) 35 175 7.4E-60 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 SAMA_RS18630 a801a80e97fca55b6e057977486b7804 201 PIRSF PIRSF020606 2 197 4.1E-79 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 SAMA_RS10645 040a6715cc925d0322e794866ab705e0 108 Pfam PF07238 PilZ domain 12 95 4.3E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SAMA_RS14400 6adbbd14675f4d98a92b62dcac7f6714 475 PANTHER PTHR10283 1 474 8.9E-186 T 22-04-2016 SAMA_RS14400 6adbbd14675f4d98a92b62dcac7f6714 475 PANTHER PTHR10283:SF91 1 474 8.9E-186 T 22-04-2016 SAMA_RS14400 6adbbd14675f4d98a92b62dcac7f6714 475 Pfam PF03600 Citrate transporter 44 419 1.2E-59 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SAMA_RS07355 4e38006bb79606ba938ace1a80c6f15b 190 PANTHER PTHR31876 7 188 3.2E-42 T 22-04-2016 SAMA_RS07355 4e38006bb79606ba938ace1a80c6f15b 190 Pfam PF04367 Protein of unknown function (DUF502) 52 157 2.4E-18 T 22-04-2016 IPR007462 Protein of unknown function DUF502 SAMA_RS13725 2ce21ac108ecfbb50c96a71ec2c48b50 349 Gene3D G3DSA:3.40.710.10 26 315 2.7E-29 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS13725 2ce21ac108ecfbb50c96a71ec2c48b50 349 SUPERFAMILY SSF56601 29 326 6.88E-30 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SAMA_RS13725 2ce21ac108ecfbb50c96a71ec2c48b50 349 Pfam PF00144 Beta-lactamase 46 309 7.0E-15 T 22-04-2016 IPR001466 Beta-lactamase-related SAMA_RS12615 871c8fe9d0321794986a13dfdf5f0b13 145 SUPERFAMILY SSF82784 6 144 4.32E-38 T 22-04-2016 IPR003718 OsmC/Ohr family SAMA_RS12615 871c8fe9d0321794986a13dfdf5f0b13 145 Pfam PF02566 OsmC-like protein 46 144 1.4E-16 T 22-04-2016 IPR003718 OsmC/Ohr family SAMA_RS12615 871c8fe9d0321794986a13dfdf5f0b13 145 Gene3D G3DSA:3.30.300.20 3 144 6.3E-48 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SAMA_RS17155 636ce66d4209cc24f630233d328dad90 159 PANTHER PTHR30087 1 157 5.5E-57 T 22-04-2016 SAMA_RS17155 636ce66d4209cc24f630233d328dad90 159 Pfam PF04463 Protein of unknown function (DUF523) 4 144 1.4E-46 T 22-04-2016 IPR007553 Domain of unknown function DUF523 SAMA_RS17155 636ce66d4209cc24f630233d328dad90 159 PANTHER PTHR30087:SF1 1 157 5.5E-57 T 22-04-2016 SAMA_RS05880 aca9ae73a926abf232e2b090a25ae752 257 PIRSF PIRSF029037 1 257 1.7E-107 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 SAMA_RS05880 aca9ae73a926abf232e2b090a25ae752 257 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 4.9E-108 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 SAMA_RS10855 53584f40229d8fbb738651bd097d65de 382 SUPERFAMILY SSF56935 23 50 1.26E-30 T 22-04-2016 SAMA_RS10855 53584f40229d8fbb738651bd097d65de 382 SUPERFAMILY SSF56935 79 380 1.26E-30 T 22-04-2016 SAMA_RS14275 7738c99d7864db19dff654aea962be93 408 Pfam PF11376 Protein of unknown function (DUF3179) 109 403 2.6E-65 T 22-04-2016 IPR021516 Protein of unknown function DUF3179 SAMA_RS09350 53b1a0dca4a26bc6497163e3af5be872 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 6.2E-11 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 2.9E-10 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 2.9E-10 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 2.9E-10 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 2.9E-10 T 22-04-2016 IPR003004 GspF/PilC family SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PANTHER PTHR30012 2 404 5.2E-275 T 22-04-2016 SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 PANTHER PTHR30012:SF4 2 404 5.2E-275 T 22-04-2016 SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.8E-26 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS02460 744dc5d554f4aa15505d989c741ef94d 406 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 7.8E-29 T 22-04-2016 IPR018076 Type II secretion system F domain SAMA_RS12210 a441f8a8bfb6b05a5722e2fb1944a6f3 329 SUPERFAMILY SSF53383 25 157 3.61E-11 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS12210 a441f8a8bfb6b05a5722e2fb1944a6f3 329 SUPERFAMILY SSF53383 209 326 3.61E-11 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SAMA_RS12210 a441f8a8bfb6b05a5722e2fb1944a6f3 329 Gene3D G3DSA:3.40.640.10 26 121 3.0E-4 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SAMA_RS03130 425db8695224486bdab5a4b66b7f5719 169 Pfam PF04205 FMN-binding domain 82 156 3.5E-7 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS03130 425db8695224486bdab5a4b66b7f5719 169 SMART SM00900 82 162 2.5E-7 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 PANTHER PTHR23344:SF7 75 362 3.7E-68 T 22-04-2016 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 PANTHER PTHR23344:SF7 385 424 3.7E-68 T 22-04-2016 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 81 413 6.9E-21 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 PANTHER PTHR23344 75 362 3.7E-68 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 PANTHER PTHR23344 385 424 3.7E-68 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 Gene3D G3DSA:3.20.20.190 79 416 3.5E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SAMA_RS15240 7089b787eddef1180a676aed38855e2b 424 SUPERFAMILY SSF51695 79 419 2.62E-68 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SAMA_RS16450 6448db816d2146b8f011bb4d7b19c99a 136 SUPERFAMILY SSF55120 11 69 2.88E-5 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SAMA_RS12430 25b9d80902a1c19b4e01739b36530a35 274 PANTHER PTHR30164 1 273 3.7E-102 T 22-04-2016 SAMA_RS12430 25b9d80902a1c19b4e01739b36530a35 274 Pfam PF06167 Glucose-regulated metallo-peptidase M90 25 267 3.5E-91 T 22-04-2016 IPR010384 MtfA family SAMA_RS12430 25b9d80902a1c19b4e01739b36530a35 274 Gene3D G3DSA:3.40.390.10 47 267 2.2E-59 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SAMA_RS12430 25b9d80902a1c19b4e01739b36530a35 274 SUPERFAMILY SSF55486 59 269 2.44E-55 T 22-04-2016 SAMA_RS01505 93c8ed71173eff6d52f53cf1cc06954d 951 Pfam PF10593 Z1 domain 432 665 1.8E-82 T 22-04-2016 IPR018310 Putative endonuclease, Z1 domain SAMA_RS02400 b208a2b35999174b6c58336e47359543 250 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 177 246 1.2E-13 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal SAMA_RS00530 093f035696e99d244b35c183ad19899e 325 Pfam PF07507 WavE lipopolysaccharide synthesis 8 311 5.8E-130 T 22-04-2016 IPR011122 WavE lipopolysaccharide synthesis SAMA_RS16950 de7c2d5e5a6715d25c99d3dd209b7ff7 396 PANTHER PTHR38043 4 374 2.3E-70 T 22-04-2016 SAMA_RS16950 de7c2d5e5a6715d25c99d3dd209b7ff7 396 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 44 358 3.8E-74 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX SAMA_RS02420 687dd88b40b360c735dfd5da9b397b3c 289 SUPERFAMILY SSF53067 55 156 8.42E-10 T 22-04-2016 SAMA_RS14225 8d61100e694a947ba526ada08ac1a97a 266 Pfam PF06114 Domain of unknown function (DUF955) 50 147 9.4E-13 T 22-04-2016 IPR010359 HTH domain, IrrE-type SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 7.3E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 4.2E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 SUPERFAMILY SSF51161 3 157 6.38E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 PANTHER PTHR23416 17 164 1.4E-47 T 22-04-2016 SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 Gene3D G3DSA:2.160.10.10 3 158 2.9E-42 T 22-04-2016 SAMA_RS11830 bf5f5ab03a81fb5ff4ff67ff5a796021 193 PANTHER PTHR23416:SF53 17 164 1.4E-47 T 22-04-2016 SAMA_RS14685 f2638a763b726ef2bedbfeb2509317fd 270 Pfam PF10670 Domain of unknown function (DUF4198) 17 245 9.7E-51 T 22-04-2016 IPR019613 Protein of unknown function DUF4198 SAMA_RS18505 0b449c06f073a64c23a180c954f0bfe2 338 Pfam PF11335 Protein of unknown function (DUF3137) 192 332 2.9E-38 T 22-04-2016 IPR021484 Protein of unknown function DUF3137 SAMA_RS10280 95e0e73b08f88df92f03a4b77a8ae96c 279 Pfam PF12679 ABC-2 family transporter protein 93 272 2.4E-10 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SAMA_RS02220 4f474a93dc3a753e3146a809707e0559 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 4.1E-12 T 22-04-2016 IPR007420 Protein of unknown function DUF465 SAMA_RS14945 c949de650bccc71b86caf290a948cdeb 405 PANTHER PTHR30572 64 405 1.1E-36 T 22-04-2016 SAMA_RS14945 c949de650bccc71b86caf290a948cdeb 405 Pfam PF12704 MacB-like periplasmic core domain 74 247 4.0E-7 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SAMA_RS14945 c949de650bccc71b86caf290a948cdeb 405 Pfam PF02687 FtsX-like permease family 287 398 9.0E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SAMA_RS07680 ddd51bcb73fe355a8bcc982b10bb3759 166 Pfam PF14345 GDYXXLXY protein 18 158 3.0E-29 T 22-04-2016 IPR025833 GDYXXLXY protein SAMA_RS02425 3cfeaeac379a05913191a5da980c0e3f 200 Pfam PF05137 Fimbrial assembly protein (PilN) 119 181 2.9E-5 T 22-04-2016 IPR007813 Fimbrial assembly PilN SAMA_RS17205 96805cf9b438c508daecfba41d3b9675 70 Pfam PF03413 Peptidase propeptide and YPEB domain 16 67 2.2E-6 T 22-04-2016 IPR025711 PepSY domain SAMA_RS04225 4cc7d5a1eb5277763cb3d20e7e8c3983 211 Pfam PF11140 Protein of unknown function (DUF2913) 5 208 1.8E-75 T 22-04-2016 IPR021316 Protein of unknown function DUF2913 SAMA_RS07705 2807b35f3901baa8d702f7dc5bc91bf1 1100 Pfam PF11739 Dicarboxylate transport 889 1095 2.9E-60 T 22-04-2016 IPR021730 Dicarboxylate transport SAMA_RS18480 a239a5924ca3338d0101f05a924907d0 332 Pfam PF11335 Protein of unknown function (DUF3137) 189 324 2.4E-36 T 22-04-2016 IPR021484 Protein of unknown function DUF3137 SAMA_RS13485 a24251830d59bc96e82965283da58923 166 Pfam PF07295 Zinc-ribbon containing domain 22 162 4.3E-44 T 22-04-2016 IPR009912 Zinc-ribbon containing domain SAMA_RS18660 9a35dbf351cf88b80f9f8a3fc7b83119 250 SUPERFAMILY SSF48317 13 232 2.94E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS18660 9a35dbf351cf88b80f9f8a3fc7b83119 250 Pfam PF01569 PAP2 superfamily 103 232 1.9E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SAMA_RS06665 93f12ba4d2e72d853efed4c517998515 145 Pfam PF11215 Protein of unknown function (DUF3010) 1 135 5.9E-51 T 22-04-2016 IPR021378 Protein of unknown function DUF3010 SAMA_RS18425 46fe08a1117390cd28fea26c3162a158 230 Gene3D G3DSA:2.40.160.10 46 99 9.7E-5 T 22-04-2016 IPR023614 Porin domain SAMA_RS18425 46fe08a1117390cd28fea26c3162a158 230 Gene3D G3DSA:2.40.160.10 164 217 9.7E-5 T 22-04-2016 IPR023614 Porin domain SAMA_RS03650 cfba83238726c15cb004888de661b0ac 313 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 308 1.2E-97 T 22-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily SAMA_RS03650 cfba83238726c15cb004888de661b0ac 313 PANTHER PTHR40400 1 313 8.1E-114 T 22-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily SAMA_RS11690 0d4d834bbbf15ad051e8b3b3f8dfa06f 230 Pfam PF11201 Protein of unknown function (DUF2982) 76 221 6.0E-53 T 22-04-2016 IPR021367 Protein of unknown function DUF2982 SAMA_RS07935 2187fb3ce91ccebab36ca5f1720b9431 196 Gene3D G3DSA:3.90.1720.10 58 99 8.6E-4 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SAMA_RS15635 a5845280a24cc8f9e74ba8b320d6bab2 153 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 15 116 1.6E-13 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 SAMA_RS15635 a5845280a24cc8f9e74ba8b320d6bab2 153 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.3E-27 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 SAMA_RS16855 968a02c9689dcf3837281432f21f8de0 154 Pfam PF01303 Egg lysin (Sperm-lysin) 34 145 5.3E-20 T 22-04-2016 IPR001379 Egg lysin (Sperm-lysin) GO:0007338 SAMA_RS08270 1cefe3359da1149ba5c0af071758b82a 691 Pfam PF06980 Protein of unknown function (DUF1302) 32 690 8.0E-197 T 22-04-2016 IPR010727 Protein of unknown function DUF1302 SAMA_RS06520 36a3e9362e520026700651e5f94fbcfa 94 Pfam PF10719 Late competence development protein ComFB 6 83 5.3E-15 T 22-04-2016 IPR019657 Late competence development protein ComFB SAMA_RS03780 b4ee06c6726d35e918f094e1239f7c28 463 Gene3D G3DSA:3.80.10.10 336 408 6.5E-4 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SAMA_RS07785 d2dcad7449c42bbca9f48c9dce0e13eb 147 Pfam PF04217 Protein of unknown function, DUF412 6 145 1.7E-52 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 SAMA_RS11005 1787bff555544463cdb86e22a8c03e62 234 PANTHER PTHR38568 1 233 8.2E-116 T 22-04-2016 SAMA_RS11005 1787bff555544463cdb86e22a8c03e62 234 PANTHER PTHR38568:SF2 1 233 8.2E-116 T 22-04-2016 SAMA_RS06370 cea8f7229b94fc15c931a8db4e20008d 198 Pfam PF06930 Protein of unknown function (DUF1282) 9 179 6.7E-44 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 SAMA_RS07055 c23ea75c7dae9ad10a4f8ff1779803ee 340 SUPERFAMILY SSF48371 85 173 7.92E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SAMA_RS07055 c23ea75c7dae9ad10a4f8ff1779803ee 340 SUPERFAMILY SSF48371 267 294 7.92E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SAMA_RS05165 92651bb5d6ffaaef18b124bd27697056 54 Pfam PF06796 Periplasmic nitrate reductase protein NapE 2 54 6.3E-21 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE SAMA_RS15300 1f8db7559112e9ba2f4364c5f8a3dbd9 246 SMART SM00953 69 204 1.1E-29 T 22-04-2016 IPR014914 RES domain SAMA_RS15300 1f8db7559112e9ba2f4364c5f8a3dbd9 246 Pfam PF08808 RES domain 54 202 7.8E-25 T 22-04-2016 IPR014914 RES domain SAMA_RS04380 875dc47ec280c6fef3b1ee30d4401d6e 370 Pfam PF16537 Type II secretion system protein B 310 369 2.9E-23 T 22-04-2016 IPR032389 Type II secretion system protein B SAMA_RS11675 3e9e91355793f7ba055625ce13756349 138 Pfam PF04519 Polymer-forming cytoskeletal 13 106 6.2E-21 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SAMA_RS11675 3e9e91355793f7ba055625ce13756349 138 PANTHER PTHR35024 13 106 1.4E-17 T 22-04-2016 SAMA_RS11675 3e9e91355793f7ba055625ce13756349 138 PANTHER PTHR35024:SF2 13 106 1.4E-17 T 22-04-2016 SAMA_RS10430 3fa3cea352cef5740571375d561c6d5b 145 Pfam PF04219 Protein of unknown function, DUF 27 114 2.0E-34 T 22-04-2016 IPR007335 Protein of unknown function DUF413 SAMA_RS00085 7247e294a33880129c7e3d7170cc9713 327 Pfam PF06166 Protein of unknown function (DUF979) 9 326 3.0E-122 T 22-04-2016 IPR009323 Protein of unknown function DUF979 SAMA_RS11895 71dfe92db7d8aff3e08bb90f5b0b2d6f 134 Pfam PF10975 Protein of unknown function (DUF2802) 65 132 1.8E-25 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 SAMA_RS12245 dcaa553685897b37ff2c9e504b8160c6 329 Gene3D G3DSA:2.40.170.20 260 295 2.9E-4 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS12245 dcaa553685897b37ff2c9e504b8160c6 329 Gene3D G3DSA:2.40.170.20 88 207 2.9E-4 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS01820 0fb88c87f193fb7a2d873323e8169cf5 154 SUPERFAMILY SSF54427 19 139 6.15E-19 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS01820 0fb88c87f193fb7a2d873323e8169cf5 154 Gene3D G3DSA:3.10.450.50 20 132 1.1E-9 T 22-04-2016 IPR032710 NTF2-like domain SAMA_RS12520 3faed2973c5ca3324649dc261945d398 241 SUPERFAMILY SSF53850 32 227 1.49E-12 T 22-04-2016 SAMA_RS03595 d7e7965525edd62c986d019f95296e92 188 SUPERFAMILY SSF51645 10 182 1.7E-17 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS03595 d7e7965525edd62c986d019f95296e92 188 Gene3D G3DSA:2.170.170.11 24 182 5.2E-40 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 SAMA_RS06810 0db12f5e12e719eeb3b869b79fd28c68 117 SUPERFAMILY SSF57716 74 112 9.27E-8 T 22-04-2016 SAMA_RS06810 0db12f5e12e719eeb3b869b79fd28c68 117 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 72 101 1.0E-5 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SAMA_RS11715 37cc1b2e4916d286806237a920ebc135 185 Pfam PF04170 NlpE N-terminal domain 81 166 2.5E-29 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE SAMA_RS03040 3fe56f6e6ac834d663305885f506efc0 383 Gene3D G3DSA:2.40.170.20 58 95 2.0E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03040 3fe56f6e6ac834d663305885f506efc0 383 Gene3D G3DSA:2.40.170.20 187 346 2.0E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SAMA_RS03040 3fe56f6e6ac834d663305885f506efc0 383 SUPERFAMILY SSF56935 21 380 5.07E-22 T 22-04-2016 SAMA_RS08780 36a0a35eb4506c3349a0274491facac0 473 Pfam PF12094 Protein of unknown function (DUF3570) 29 472 4.5E-148 T 22-04-2016 IPR021953 Protein of unknown function DUF3570 SAMA_RS16710 6ed78b982848850513b32626da12f306 178 PIRSF PIRSF032038 1 178 8.6E-38 T 22-04-2016 IPR016987 Uncharacterised conserved protein UCP023238 SAMA_RS07720 c15f650c1eaeac3dc9e56f9a5510748c 377 Pfam PF04338 Protein of unknown function, DUF481 158 376 1.1E-50 T 22-04-2016 IPR007433 Protein of unknown function DUF481 SAMA_RS09840 5331adb09dde55e5a37c9de95fd6a2c7 439 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 38 402 1.6E-129 T 22-04-2016 IPR020010 Conserved hypothetical protein CHP03503 SAMA_RS14855 8ca8323c9469bc0f22d519c45ffc5774 135 Pfam PF09851 Short C-terminal domain 103 129 1.1E-6 T 22-04-2016 IPR018649 SHOCT domain SAMA_RS03715 f31bf974bfa6704944bc954f052b8373 64 Pfam PF04021 Class III signal peptide 7 27 1.5E-5 T 22-04-2016 IPR007166 Class III signal peptide motif SAMA_RS17960 c2ca2e85df6dbdb5a8c50228f0262a23 180 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 176 6.0E-46 T 22-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE SAMA_RS01530 c7b11dd8b302d3c22827c6cf22c2f84e 202 Pfam PF04403 Paraquat-inducible protein A 76 198 1.1E-18 T 22-04-2016 IPR007498 Paraquat-inducible protein A SAMA_RS17785 b373b5c095d90ea26bc142f270a321aa 392 Pfam PF08933 Domain of unknown function (DUF1864) 6 391 3.8E-211 T 22-04-2016 IPR015029 Protein of unknown function DUF1864 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.-|UniPathway: UPA00628 SAMA_RS17785 b373b5c095d90ea26bc142f270a321aa 392 SUPERFAMILY SSF140959 7 390 7.46E-119 T 22-04-2016 SAMA_RS09360 25135835957b283e3ffaea1af813e7a6 159 Pfam PF05751 FixH 9 148 5.4E-43 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH SAMA_RS10770 8333ac2220839d163762aa930ddb2f4b 147 Pfam PF16108 Domain of unknown function (DUF4826) 18 146 1.4E-62 T 22-04-2016 IPR032251 Protein of unknown function DUF4826 SAMA_RS07550 060eff216ac0490aef2ac3a072002e8b 131 Pfam PF07233 Protein of unknown function (DUF1425) 36 126 2.7E-30 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 SAMA_RS17350 d4b65b17e5c488fea9cd3c68b4d2898c 349 Pfam PF01757 Acyltransferase family 8 332 2.6E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SAMA_RS18140 671e3cbaf3bcf929fa75399168ee3762 249 Pfam PF02104 SURF1 family 21 227 4.9E-29 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 SAMA_RS03475 66f0b0b65a825ead78a60f670492ae49 418 Pfam PF16024 Domain of unknown function (DUF4785) 84 409 3.8E-10 T 22-04-2016 IPR031979 Protein of unknown function DUF4785 SAMA_RS16845 9469dfe9c12132e99f4f10e9c505a8d6 128 Pfam PF12514 Protein of unknown function (DUF3718) 37 111 5.8E-22 T 22-04-2016 IPR022193 Protein of unknown function DUF3718 SAMA_RS04295 89fab2ec48d26b5bf829184f3310357a 258 Pfam PF13349 Putative adhesin 48 232 1.0E-10 T 22-04-2016 IPR025164 Putative adhesin SAMA_RS19025 8a983c1dfc4c8ba32c8a1aa06cfba2bc 83 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 4.1E-6 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SAMA_RS19025 8a983c1dfc4c8ba32c8a1aa06cfba2bc 83 PANTHER PTHR36931 2 83 4.1E-35 T 22-04-2016 SAMA_RS04190 9f793a4db26fad04600bb34ebd0d37e5 83 Pfam PF11173 Protein of unknown function (DUF2960) 1 79 2.5E-38 T 22-04-2016 IPR021343 Protein of unknown function DUF2960 SAMA_RS17340 123ecd1200d3330e12530c957c101e72 191 Pfam PF04366 Las17-binding protein actin regulator 88 185 6.4E-7 T 22-04-2016 IPR007461 Ysc84 actin-binding domain SAMA_RS08240 f5500e44f35e729e58a49edfd7c1377f 95 Pfam PF07130 YebG protein 1 74 1.7E-32 T 22-04-2016 IPR009813 Uncharacterised protein family YebG SAMA_RS08240 f5500e44f35e729e58a49edfd7c1377f 95 Gene3D G3DSA:1.10.10.710 20 87 5.4E-22 T 22-04-2016 IPR009813 Uncharacterised protein family YebG SAMA_RS04280 bf43db94e1486e874717fbdd193d9eaf 169 Pfam PF11086 Protein of unknown function (DUF2878) 8 150 2.6E-34 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 SAMA_RS18540 4f0f62f6fa3e19bbcc25188cdfbb83c4 248 SUPERFAMILY SSF53850 17 237 2.28E-13 T 22-04-2016 SAMA_RS13315 3e34a55e928b9688a9310c7d6b0e18db 186 Pfam PF03923 Uncharacterized lipoprotein 35 184 1.8E-41 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG SAMA_RS00780 88d9ca0a15cfa1c2ce8ac0bfcb256430 126 Pfam PF11456 Protein of unknown function (DUF3019) 28 125 4.2E-22 T 22-04-2016 IPR021559 Protein of unknown function DUF3019 SAMA_RS08775 2a33927265b1fd73995f1701c2319adf 68 Pfam PF14086 Domain of unknown function (DUF4266) 20 68 1.1E-21 T 22-04-2016 IPR025362 Domain of unknown function DUF4266 SAMA_RS14750 edf14223fb5321278a03229c092a659e 135 Pfam PF12514 Protein of unknown function (DUF3718) 32 96 4.7E-25 T 22-04-2016 IPR022193 Protein of unknown function DUF3718 SAMA_RS16890 591f3982b7bd989251cfde64bea21842 163 Pfam PF04326 Putative DNA-binding domain 14 143 4.1E-11 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SAMA_RS14185 28a8cbbbb0d0da0a401eb2a1419bcf27 118 SUPERFAMILY SSF50891 1 110 8.72E-26 T 22-04-2016 IPR029000 Cyclophilin-like domain SAMA_RS19045 54b96a404977d938f321fb21f7dc63e9 177 Pfam PF10882 Bacterial PH domain 69 172 8.8E-5 T 22-04-2016 IPR027783 Bacterial Pleckstrin homology domain-related SAMA_RS10020 b8fa5bffbc337bf87460d8533a0aa9f0 130 Pfam PF09842 Predicted membrane protein (DUF2069) 13 112 1.8E-27 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane SAMA_RS14885 42e4ee6750f106409c8b56a68b7cbf1f 120 Pfam PF13564 DoxX-like family 14 105 2.4E-15 T 22-04-2016 IPR032808 DoxX family SAMA_RS16805 6eafccc04ae206d2fc787e749dd27022 131 Pfam PF07635 Planctomycete cytochrome C 39 99 2.3E-12 T 22-04-2016 IPR011429 Cytochrome C, Planctomycete SAMA_RS06830 8bf78f6a9fca44f426d6bf4623d2cb00 252 Pfam PF09836 Putative DNA-binding domain 6 90 6.3E-26 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria SAMA_RS08880 7d2857fa46406883bea76624565e5445 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 86 5.8E-7 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SAMA_RS03020 c024d551e3e6dac5dd511aea56a98be6 114 Pfam PF13642 protein structure with unknown function 13 109 1.7E-27 T 22-04-2016 IPR025284 Protein of unknown function DUF4144 SAMA_RS07800 d29e9ad7568865c0acba02e3aee431f3 521 Pfam PF11840 Protein of unknown function (DUF3360) 23 521 1.9E-269 T 22-04-2016 IPR021794 Protein of unknown function DUF3360 SAMA_RS07715 7c1f9dc9575b964dd307a09dc35e611e 354 Pfam PF11281 Protein of unknown function (DUF3083) 40 352 1.2E-152 T 22-04-2016 IPR021433 Protein of unknown function DUF3083 SAMA_RS11185 d07e70036ff456d5bc192e7d9ba52cea 154 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 9.9E-35 T 22-04-2016 IPR009476 Protein of unknown function DUF1097