locus-tag class description SWP_RS00005 PF00258 Flavodoxin SWP_RS00010 PF01235 Sodium:alanine symporter family SWP_RS00015 PF01810 LysE type translocator SWP_RS00020 PF06224 Winged helix DNA-binding domain SWP_RS00025 PF01043 SecA preprotein cross-linking domain SWP_RS00025 PF07517 SecA DEAD-like domain SWP_RS00025 PF02810 SEC-C motif SWP_RS00025 PF07516 SecA Wing and Scaffold domain SWP_RS00040 PF13411 MerR HTH family regulatory protein SWP_RS00040 PF00145 C-5 cytosine-specific DNA methylase SWP_RS00050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SWP_RS00050 PF00271 Helicase conserved C-terminal domain SWP_RS00050 PF04408 Helicase associated domain (HA2) SWP_RS00050 PF11898 Domain of unknown function (DUF3418) SWP_RS00050 PF00270 DEAD/DEAH box helicase SWP_RS00055 PF01926 50S ribosome-binding GTPase SWP_RS00055 PF12631 MnmE helical domain SWP_RS00055 PF10396 GTP-binding protein TrmE N-terminus SWP_RS00060 PF02096 60Kd inner membrane protein SWP_RS00060 PF14849 YidC periplasmic domain SWP_RS00065 PF00825 Ribonuclease P SWP_RS00070 PF00468 Ribosomal protein L34 SWP_RS00075 PF11638 DnaA N-terminal domain SWP_RS00075 PF08299 Bacterial dnaA protein helix-turn-helix SWP_RS00075 PF00308 Bacterial dnaA protein SWP_RS00080 PF00712 DNA polymerase III beta subunit, N-terminal domain SWP_RS00080 PF02767 DNA polymerase III beta subunit, central domain SWP_RS00080 PF02768 DNA polymerase III beta subunit, C-terminal domain SWP_RS00085 PF02463 RecF/RecN/SMC N terminal domain SWP_RS00090 PF01751 Toprim domain SWP_RS00090 PF00204 DNA gyrase B SWP_RS00090 PF00986 DNA gyrase B subunit, carboxyl terminus SWP_RS00090 PF18053 DNA gyrase B subunit insert domain SWP_RS00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS00095 PF08668 HDOD domain SWP_RS00095 PF00563 EAL domain SWP_RS00100 PF05746 DALR anticodon binding domain SWP_RS00100 PF02092 Glycyl-tRNA synthetase beta subunit SWP_RS00105 PF02091 Glycyl-tRNA synthetase alpha subunit SWP_RS00110 PF03352 Methyladenine glycosylase SWP_RS00115 PF00326 Prolyl oligopeptidase family SWP_RS00115 PF07676 WD40-like Beta Propeller Repeat SWP_RS00125 PF01206 Sulfurtransferase TusA SWP_RS00130 PF04073 Aminoacyl-tRNA editing domain SWP_RS00160 PF01464 Transglycosylase SLT domain SWP_RS00160 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SWP_RS00165 PF00108 Thiolase, N-terminal domain SWP_RS00165 PF02803 Thiolase, C-terminal domain SWP_RS00170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SWP_RS00170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SWP_RS00170 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS00190 PF00266 Aminotransferase class-V SWP_RS00195 PF00501 AMP-binding enzyme SWP_RS00200 PF00550 Phosphopantetheine attachment site SWP_RS00200 PF00975 Thioesterase domain SWP_RS00200 PF14765 Polyketide synthase dehydratase SWP_RS00200 PF08242 Methyltransferase domain SWP_RS00200 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS00200 PF16197 Ketoacyl-synthetase C-terminal extension SWP_RS00200 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS00225 PF00557 Metallopeptidase family M24 SWP_RS00230 PF01205 Uncharacterized protein family UPF0029 SWP_RS00230 PF09186 Domain of unknown function (DUF1949) SWP_RS00235 PF02386 Cation transport protein SWP_RS00240 PF12724 Flavodoxin domain SWP_RS00245 PF01022 Bacterial regulatory protein, arsR family SWP_RS00250 PF12724 Flavodoxin domain SWP_RS00255 PF02386 Cation transport protein SWP_RS00260 PF02254 TrkA-N domain SWP_RS00260 PF02080 TrkA-C domain SWP_RS00265 PF01189 16S rRNA methyltransferase RsmB/F SWP_RS00265 PF01029 NusB family SWP_RS00270 PF00551 Formyl transferase SWP_RS00270 PF02911 Formyl transferase, C-terminal domain SWP_RS00275 PF01327 Polypeptide deformylase SWP_RS00285 PF17782 DprA winged helix domain SWP_RS00285 PF02481 DNA recombination-mediator protein A SWP_RS00290 PF04361 Protein of unknown function (DUF494) SWP_RS00295 PF01752 Collagenase SWP_RS00295 PF08453 Peptidase family M9 N-terminal SWP_RS00300 PF01396 Topoisomerase DNA binding C4 zinc finger SWP_RS00305 PF01300 Telomere recombination SWP_RS00310 PF01218 Coproporphyrinogen III oxidase SWP_RS00315 PF01152 Bacterial-like globin SWP_RS00320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SWP_RS00320 PF08501 Shikimate dehydrogenase substrate binding domain SWP_RS00320 PF01488 Shikimate / quinate 5-dehydrogenase SWP_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS00355 PF03692 Putative zinc- or iron-chelating domain SWP_RS00360 PF02082 Transcriptional regulator SWP_RS00365 PF04748 Divergent polysaccharide deacetylase SWP_RS00370 PF13180 PDZ domain SWP_RS00370 PF03572 Peptidase family S41 SWP_RS00375 PF01551 Peptidase family M23 SWP_RS00380 PF01676 Metalloenzyme superfamily SWP_RS00380 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SWP_RS00385 PF00581 Rhodanese-like domain SWP_RS00390 PF02556 Preprotein translocase subunit SecB SWP_RS00395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SWP_RS00395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SWP_RS00405 PF07715 TonB-dependent Receptor Plug Domain SWP_RS00405 PF00593 TonB dependent receptor SWP_RS00410 PF03328 HpcH/HpaI aldolase/citrate lyase family SWP_RS00425 PF07690 Major Facilitator Superfamily SWP_RS00430 PF06276 Ferric iron reductase FhuF-like transporter SWP_RS00430 PF04183 IucA / IucC family SWP_RS00435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SWP_RS00435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SWP_RS00440 PF03462 PCRF domain SWP_RS00440 PF00472 RF-1 domain SWP_RS00450 PF00892 EamA-like transporter family SWP_RS00460 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS00470 PF02333 Phytase SWP_RS00480 PF00877 NlpC/P60 family SWP_RS00485 PF00994 Probable molybdopterin binding domain SWP_RS00495 PF12833 Helix-turn-helix domain SWP_RS00495 PF02311 AraC-like ligand binding domain SWP_RS00505 PF12679 ABC-2 family transporter protein SWP_RS00510 PF00005 ABC transporter SWP_RS00520 PF07702 UTRA domain SWP_RS00520 PF00392 Bacterial regulatory proteins, gntR family SWP_RS00525 PF00005 ABC transporter SWP_RS00535 PF00501 AMP-binding enzyme SWP_RS00600 PF00005 ABC transporter SWP_RS00600 PF12704 MacB-like periplasmic core domain SWP_RS00600 PF02687 FtsX-like permease family SWP_RS00610 PF01979 Amidohydrolase family SWP_RS00615 PF00392 Bacterial regulatory proteins, gntR family SWP_RS00615 PF07702 UTRA domain SWP_RS00620 PF17391 Urocanase N-terminal domain SWP_RS00620 PF17392 Urocanase C-terminal domain SWP_RS00620 PF01175 Urocanase Rossmann-like domain SWP_RS00625 PF00221 Aromatic amino acid lyase SWP_RS00655 PF05175 Methyltransferase small domain SWP_RS00675 PF00924 Mechanosensitive ion channel SWP_RS00685 PF01227 GTP cyclohydrolase I SWP_RS00690 PF02152 Dihydroneopterin aldolase SWP_RS00700 PF05114 Protein of unknown function (DUF692) SWP_RS00710 PF08281 Sigma-70, region 4 SWP_RS00710 PF04542 Sigma-70 region 2 SWP_RS00725 PF13333 Integrase core domain SWP_RS00725 PF00665 Integrase core domain SWP_RS00725 PF13276 HTH-like domain SWP_RS00730 PF01527 Transposase SWP_RS00740 PF00072 Response regulator receiver domain SWP_RS00740 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS00760 PF07715 TonB-dependent Receptor Plug Domain SWP_RS00765 PF07715 TonB-dependent Receptor Plug Domain SWP_RS00765 PF00593 TonB dependent receptor SWP_RS00780 PF00899 ThiF family SWP_RS00785 PF03453 MoeA N-terminal region (domain I and II) SWP_RS00785 PF03454 MoeA C-terminal region (domain IV) SWP_RS00785 PF00994 Probable molybdopterin binding domain SWP_RS00790 PF00210 Ferritin-like domain SWP_RS00795 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS00795 PF00563 EAL domain SWP_RS00795 PF03707 Bacterial signalling protein N terminal repeat SWP_RS00800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SWP_RS00805 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SWP_RS00805 PF00326 Prolyl oligopeptidase family SWP_RS00810 PF01541 GIY-YIG catalytic domain SWP_RS00815 PF01925 Sulfite exporter TauE/SafE SWP_RS00825 PF01717 Cobalamin-independent synthase, Catalytic domain SWP_RS00825 PF08267 Cobalamin-independent synthase, N-terminal domain SWP_RS00845 PF00246 Zinc carboxypeptidase SWP_RS00855 PF01381 Helix-turn-helix SWP_RS00865 PF01293 Phosphoenolpyruvate carboxykinase SWP_RS00870 PF01430 Hsp33 protein SWP_RS00875 PF01479 S4 domain SWP_RS00880 PF11356 Type II secretion system protein C SWP_RS00885 PF00263 Bacterial type II and III secretion system protein SWP_RS00885 PF03958 Bacterial type II/III secretion system short domain SWP_RS00890 PF00437 Type II/IV secretion system protein SWP_RS00895 PF00482 Type II secretion system (T2SS), protein F SWP_RS00900 PF08334 Type II secretion system (T2SS), protein G SWP_RS00900 PF07963 Prokaryotic N-terminal methylation motif SWP_RS00905 PF12019 Type II transport protein GspH SWP_RS00905 PF07963 Prokaryotic N-terminal methylation motif SWP_RS00910 PF02501 Type II secretion system (T2SS), protein I SWP_RS00910 PF07963 Prokaryotic N-terminal methylation motif SWP_RS00915 PF11612 Type II secretion system (T2SS), protein J SWP_RS00915 PF07963 Prokaryotic N-terminal methylation motif SWP_RS00920 PF03934 Type II secretion system (T2SS), protein K SWP_RS00925 PF05134 Type II secretion system (T2SS), protein L SWP_RS00925 PF12693 GspL periplasmic domain SWP_RS00930 PF04612 Type II secretion system (T2SS), protein M SWP_RS00940 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS00945 PF00293 NUDIX domain SWP_RS00950 PF00459 Inositol monophosphatase family SWP_RS00955 PF07690 Major Facilitator Superfamily SWP_RS00965 PF02769 AIR synthase related protein, C-terminal domain SWP_RS00965 PF00586 AIR synthase related protein, N-terminal domain SWP_RS00975 PF00440 Bacterial regulatory proteins, tetR family SWP_RS00980 PF05958 tRNA (Uracil-5-)-methyltransferase SWP_RS00985 PF01177 Asp/Glu/Hydantoin racemase SWP_RS01010 PF00588 SpoU rRNA Methylase family SWP_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01015 PF03466 LysR substrate binding domain SWP_RS01020 PF04055 Radical SAM superfamily SWP_RS01025 PF11230 Protein of unknown function (DUF3029) SWP_RS01030 PF00171 Aldehyde dehydrogenase family SWP_RS01035 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS01035 PF00107 Zinc-binding dehydrogenase SWP_RS01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01045 PF03466 LysR substrate binding domain SWP_RS01050 PF14537 Cytochrome c3 SWP_RS01050 PF00890 FAD binding domain SWP_RS01060 PF16867 Dimethlysulfonioproprionate lyase SWP_RS01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01075 PF03466 LysR substrate binding domain SWP_RS01085 PF00672 HAMP domain SWP_RS01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS01090 PF01384 Phosphate transporter family SWP_RS01115 PF01928 CYTH domain SWP_RS01135 PF16527 Two-component sensor protein CpxA, periplasmic domain SWP_RS01135 PF00672 HAMP domain SWP_RS01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS01135 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS01140 PF00072 Response regulator receiver domain SWP_RS01140 PF00486 Transcriptional regulatory protein, C terminal SWP_RS01145 PF07813 LTXXQ motif family protein SWP_RS01150 PF16916 Dimerisation domain of Zinc Transporter SWP_RS01150 PF01545 Cation efflux family SWP_RS01155 PF13505 Outer membrane protein beta-barrel domain SWP_RS01165 PF00158 Sigma-54 interaction domain SWP_RS01165 PF00072 Response regulator receiver domain SWP_RS01165 PF02954 Bacterial regulatory protein, Fis family SWP_RS01170 PF00989 PAS fold SWP_RS01170 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS01185 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SWP_RS01185 PF07007 Lysozyme inhibitor LprI SWP_RS01200 PF00465 Iron-containing alcohol dehydrogenase SWP_RS01205 PF16925 Tetracyclin repressor-like, C-terminal domain SWP_RS01205 PF00440 Bacterial regulatory proteins, tetR family SWP_RS01210 PF01037 Lrp/AsnC ligand binding domain SWP_RS01220 PF00266 Aminotransferase class-V SWP_RS01245 PF00375 Sodium:dicarboxylate symporter family SWP_RS01255 PF03951 Glutamine synthetase, beta-Grasp domain SWP_RS01255 PF00120 Glutamine synthetase, catalytic domain SWP_RS01260 PF03144 Elongation factor Tu domain 2 SWP_RS01260 PF00009 Elongation factor Tu GTP binding domain SWP_RS01260 PF00679 Elongation factor G C-terminus SWP_RS01285 PF04235 Protein of unknown function (DUF418) SWP_RS01290 PF12801 4Fe-4S binding domain SWP_RS01305 PF03631 Virulence factor BrkB SWP_RS01310 PF00561 alpha/beta hydrolase fold SWP_RS01320 PF02580 D-Tyr-tRNA(Tyr) deacylase SWP_RS01325 PF00583 Acetyltransferase (GNAT) family SWP_RS01325 PF09500 Putative thioesterase (yiiD_Cterm) SWP_RS01335 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS01335 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS01350 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS01350 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS01360 PF04820 Tryptophan halogenase SWP_RS01380 PF00221 Aromatic amino acid lyase SWP_RS01390 PF07977 FabA-like domain SWP_RS01395 PF13193 AMP-binding enzyme C-terminal domain SWP_RS01395 PF00501 AMP-binding enzyme SWP_RS01395 PF16177 Acetyl-coenzyme A synthetase N-terminus SWP_RS01405 PF00550 Phosphopantetheine attachment site SWP_RS01410 PF00550 Phosphopantetheine attachment site SWP_RS01415 PF01553 Acyltransferase SWP_RS01415 PF00501 AMP-binding enzyme SWP_RS01415 PF13193 AMP-binding enzyme C-terminal domain SWP_RS01430 PF17191 RecG wedge domain SWP_RS01430 PF00270 DEAD/DEAH box helicase SWP_RS01430 PF00271 Helicase conserved C-terminal domain SWP_RS01435 PF00196 Bacterial regulatory proteins, luxR family SWP_RS01435 PF00072 Response regulator receiver domain SWP_RS01440 PF07730 Histidine kinase SWP_RS01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS01450 PF01699 Sodium/calcium exchanger protein SWP_RS01455 PF00501 AMP-binding enzyme SWP_RS01460 PF00588 SpoU rRNA Methylase family SWP_RS01460 PF12105 SpoU, rRNA methylase, C-terminal SWP_RS01465 PF01042 Endoribonuclease L-PSP SWP_RS01470 PF02824 TGS domain SWP_RS01470 PF04607 Region found in RelA / SpoT proteins SWP_RS01470 PF13291 ACT domain SWP_RS01475 PF01192 RNA polymerase Rpb6 SWP_RS01480 PF00625 Guanylate kinase SWP_RS01500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SWP_RS01500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SWP_RS01520 PF00561 alpha/beta hydrolase fold SWP_RS01545 PF01063 Amino-transferase class IV SWP_RS01555 PF01553 Acyltransferase SWP_RS01560 PF01553 Acyltransferase SWP_RS01565 PF01078 Magnesium chelatase, subunit ChlI SWP_RS01565 PF13335 Magnesium chelatase, subunit ChlI C-terminal SWP_RS01595 PF08019 Phosphoethanolamine transferase EptA/EptB SWP_RS01595 PF00884 Sulfatase SWP_RS01615 PF03466 LysR substrate binding domain SWP_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01620 PF03466 LysR substrate binding domain SWP_RS01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01625 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SWP_RS01625 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SWP_RS01630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SWP_RS01630 PF00205 Thiamine pyrophosphate enzyme, central domain SWP_RS01630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SWP_RS01640 PF01063 Amino-transferase class IV SWP_RS01645 PF00920 Dehydratase family SWP_RS01650 PF00585 C-terminal regulatory domain of Threonine dehydratase SWP_RS01650 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS01660 PF00266 Aminotransferase class-V SWP_RS01665 PF10502 Signal peptidase, peptidase S26 SWP_RS01675 PF12706 Beta-lactamase superfamily domain SWP_RS01680 PF17932 Tetracyclin repressor-like, C-terminal domain SWP_RS01680 PF00440 Bacterial regulatory proteins, tetR family SWP_RS01690 PF00209 Sodium:neurotransmitter symporter family SWP_RS01695 PF01037 Lrp/AsnC ligand binding domain SWP_RS01700 PF01569 PAP2 superfamily SWP_RS01705 PF04224 Protein of unknown function, DUF417 SWP_RS01710 PF04380 Membrane fusogenic activity SWP_RS01715 PF00873 AcrB/AcrD/AcrF family SWP_RS01720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS01725 PF00440 Bacterial regulatory proteins, tetR family SWP_RS01730 PF13361 UvrD-like helicase C-terminal domain SWP_RS01730 PF00580 UvrD/REP helicase N-terminal domain SWP_RS01735 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS01735 PF00563 EAL domain SWP_RS01735 PF03707 Bacterial signalling protein N terminal repeat SWP_RS01760 PF06629 MltA-interacting protein MipA SWP_RS01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS01770 PF00672 HAMP domain SWP_RS01770 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS01775 PF00486 Transcriptional regulatory protein, C terminal SWP_RS01775 PF00072 Response regulator receiver domain SWP_RS01805 PF02321 Outer membrane efflux protein SWP_RS01810 PF13533 Biotin-lipoyl like SWP_RS01815 PF00005 ABC transporter SWP_RS01815 PF00664 ABC transporter transmembrane region SWP_RS01815 PF03412 Peptidase C39 family SWP_RS01840 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SWP_RS01850 PF03900 Porphobilinogen deaminase, C-terminal domain SWP_RS01850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SWP_RS01855 PF12633 Adenylate cyclase NT domain SWP_RS01855 PF01295 Adenylate cyclase, class-I SWP_RS01860 PF01491 Frataxin-like domain SWP_RS01865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SWP_RS01865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SWP_RS01870 PF01678 Diaminopimelate epimerase SWP_RS01880 PF02899 Phage integrase, N-terminal SAM-like domain SWP_RS01880 PF00589 Phage integrase family SWP_RS01885 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS01890 PF04405 Domain of Unknown function (DUF542) SWP_RS01890 PF01814 Hemerythrin HHE cation binding domain SWP_RS01930 PF00958 GMP synthase C terminal domain SWP_RS01930 PF02540 NAD synthase SWP_RS01930 PF00117 Glutamine amidotransferase class-I SWP_RS01935 PF00465 Iron-containing alcohol dehydrogenase SWP_RS01940 PF00171 Aldehyde dehydrogenase family SWP_RS01945 PF00120 Glutamine synthetase, catalytic domain SWP_RS01950 PF02954 Bacterial regulatory protein, Fis family SWP_RS01955 PF01207 Dihydrouridine synthase (Dus) SWP_RS01965 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SWP_RS01970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SWP_RS01975 PF00890 FAD binding domain SWP_RS01975 PF02910 Fumarate reductase flavoprotein C-term SWP_RS01980 PF13085 2Fe-2S iron-sulfur cluster binding domain SWP_RS01980 PF13183 4Fe-4S dicluster domain SWP_RS01985 PF03466 LysR substrate binding domain SWP_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS01990 PF07498 Rho termination factor, N-terminal domain SWP_RS01990 PF07497 Rho termination factor, RNA-binding domain SWP_RS01990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SWP_RS01995 PF00085 Thioredoxin SWP_RS02000 PF00270 DEAD/DEAH box helicase SWP_RS02000 PF00271 Helicase conserved C-terminal domain SWP_RS02005 PF02541 Ppx/GppA phosphatase family SWP_RS02010 PF00593 TonB dependent receptor SWP_RS02010 PF00593 TonB dependent receptor SWP_RS02025 PF00490 Delta-aminolevulinic acid dehydratase SWP_RS02030 PF01590 GAF domain SWP_RS02030 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS02030 PF00360 Phytochrome region SWP_RS02030 PF00563 EAL domain SWP_RS02035 PF01026 TatD related DNase SWP_RS02045 PF00902 Sec-independent protein translocase protein (TatC) SWP_RS02050 PF02416 mttA/Hcf106 family SWP_RS02055 PF02416 mttA/Hcf106 family SWP_RS02060 PF03109 ABC1 family SWP_RS02070 PF01209 ubiE/COQ5 methyltransferase family SWP_RS02075 PF00491 Arginase family SWP_RS02085 PF03737 Aldolase/RraA SWP_RS02095 PF01569 PAP2 superfamily SWP_RS02115 PF01048 Phosphorylase superfamily SWP_RS02125 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS02125 PF07724 AAA domain (Cdc48 subfamily) SWP_RS02125 PF10431 C-terminal, D2-small domain, of ClpB protein SWP_RS02130 PF00227 Proteasome subunit SWP_RS02190 PF05746 DALR anticodon binding domain SWP_RS02190 PF03485 Arginyl tRNA synthetase N terminal domain SWP_RS02190 PF00750 tRNA synthetases class I (R) SWP_RS02195 PF00271 Helicase conserved C-terminal domain SWP_RS02195 PF17764 3′ DNA-binding domain (3′BD) SWP_RS02195 PF18074 Primosomal protein N C-terminal domain SWP_RS02195 PF00270 DEAD/DEAH box helicase SWP_RS02195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SWP_RS02205 PF01197 Ribosomal protein L31 SWP_RS02215 PF03949 Malic enzyme, NAD binding domain SWP_RS02215 PF00390 Malic enzyme, N-terminal domain SWP_RS02245 PF03958 Bacterial type II/III secretion system short domain SWP_RS02245 PF00263 Bacterial type II and III secretion system protein SWP_RS02250 PF13401 AAA domain SWP_RS02250 PF01471 Putative peptidoglycan binding domain SWP_RS02260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SWP_RS02260 PF00437 Type II/IV secretion system protein SWP_RS02265 PF00482 Type II secretion system (T2SS), protein F SWP_RS02275 PF07963 Prokaryotic N-terminal methylation motif SWP_RS02280 PF07963 Prokaryotic N-terminal methylation motif SWP_RS02320 PF04085 rod shape-determining protein MreC SWP_RS02325 PF04093 rod shape-determining protein MreD SWP_RS02330 PF02545 Maf-like protein SWP_RS02335 PF10150 Ribonuclease E/G family SWP_RS02335 PF00575 S1 RNA binding domain SWP_RS02340 PF13502 AsmA-like C-terminal region SWP_RS02340 PF13116 Protein of unknown function SWP_RS02345 PF00795 Carbon-nitrogen hydrolase SWP_RS02350 PF01523 Putative modulator of DNA gyrase SWP_RS02360 PF13533 Biotin-lipoyl like SWP_RS02380 PF04751 Protein of unknown function (DUF615) SWP_RS02385 PF01523 Putative modulator of DNA gyrase SWP_RS02395 PF01022 Bacterial regulatory protein, arsR family SWP_RS02400 PF01758 Sodium Bile acid symporter family SWP_RS02405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SWP_RS02405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SWP_RS02415 PF01235 Sodium:alanine symporter family SWP_RS02435 PF00216 Bacterial DNA-binding protein SWP_RS02440 PF00072 Response regulator receiver domain SWP_RS02470 PF00563 EAL domain SWP_RS02470 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS02470 PF03707 Bacterial signalling protein N terminal repeat SWP_RS02490 PF00248 Aldo/keto reductase family SWP_RS02495 PF01268 Formate--tetrahydrofolate ligase SWP_RS02500 PF00924 Mechanosensitive ion channel SWP_RS02500 PF05552 Conserved TM helix SWP_RS02525 PF01553 Acyltransferase SWP_RS02530 PF06877 Regulator of ribonuclease activity B SWP_RS02535 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS02535 PF05230 MASE2 domain SWP_RS02540 PF01339 CheB methylesterase SWP_RS02540 PF00072 Response regulator receiver domain SWP_RS02545 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS02560 PF18337 RapA N-terminal Tudor like domain SWP_RS02560 PF18339 RapA N-terminal Tudor like domain 1 SWP_RS02560 PF00176 SNF2 family N-terminal domain SWP_RS02560 PF12137 RNA polymerase recycling family C-terminal SWP_RS02560 PF00271 Helicase conserved C-terminal domain SWP_RS02565 PF02562 PhoH-like protein SWP_RS02565 PF13638 PIN domain SWP_RS02570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS02570 PF00072 Response regulator receiver domain SWP_RS02570 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS02570 PF00672 HAMP domain SWP_RS02570 PF01627 Hpt domain SWP_RS02600 PF00873 AcrB/AcrD/AcrF family SWP_RS02605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS02610 PF03466 LysR substrate binding domain SWP_RS02620 PF01554 MatE SWP_RS02625 PF00166 Chaperonin 10 Kd subunit SWP_RS02630 PF00118 TCP-1/cpn60 chaperonin family SWP_RS02655 PF01569 PAP2 superfamily SWP_RS02690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SWP_RS02690 PF00205 Thiamine pyrophosphate enzyme, central domain SWP_RS02690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SWP_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS02695 PF03466 LysR substrate binding domain SWP_RS02735 PF02335 Cytochrome c552 SWP_RS02740 PF02335 Cytochrome c552 SWP_RS02745 PF02001 Protein of unknown function DUF134 SWP_RS02760 PF00892 EamA-like transporter family SWP_RS02765 PF01047 MarR family SWP_RS02785 PF01022 Bacterial regulatory protein, arsR family SWP_RS02815 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS02820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SWP_RS02830 PF01590 GAF domain SWP_RS02830 PF00360 Phytochrome region SWP_RS02830 PF00563 EAL domain SWP_RS02830 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS02845 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SWP_RS02845 PF00400 WD domain, G-beta repeat SWP_RS02855 PF03459 TOBE domain SWP_RS02860 PF08329 Chitinase A, N-terminal domain SWP_RS02860 PF00704 Glycosyl hydrolases family 18 SWP_RS02865 PF01494 FAD binding domain SWP_RS02870 PF17990 L-Lysine epsilon oxidase N-terminal SWP_RS02870 PF18417 L-lysine epsilon oxidase C-terminal domain SWP_RS02885 PF07690 Major Facilitator Superfamily SWP_RS02890 PF02926 THUMP domain SWP_RS02890 PF01170 Putative RNA methylase family UPF0020 SWP_RS02890 PF10672 S-adenosylmethionine-dependent methyltransferase SWP_RS02915 PF00672 HAMP domain SWP_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS02915 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS02920 PF00486 Transcriptional regulatory protein, C terminal SWP_RS02920 PF00072 Response regulator receiver domain SWP_RS02925 PF00535 Glycosyl transferase family 2 SWP_RS02960 PF00691 OmpA family SWP_RS02960 PF13488 Glycine zipper SWP_RS02970 PF03448 MgtE intracellular N domain SWP_RS02970 PF01769 Divalent cation transporter SWP_RS02970 PF00571 CBS domain SWP_RS02975 PF00381 PTS HPr component phosphorylation site SWP_RS02980 PF03668 P-loop ATPase protein family SWP_RS02985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SWP_RS02990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SWP_RS02995 PF00309 Sigma-54 factor, Activator interacting domain (AID) SWP_RS02995 PF04963 Sigma-54 factor, core binding domain SWP_RS02995 PF04552 Sigma-54, DNA binding domain SWP_RS03000 PF12399 Branched-chain amino acid ATP-binding cassette transporter SWP_RS03000 PF00005 ABC transporter SWP_RS03020 PF00571 CBS domain SWP_RS03020 PF01380 SIS domain SWP_RS03025 PF01699 Sodium/calcium exchanger protein SWP_RS03030 PF00005 ABC transporter SWP_RS03035 PF02405 Permease MlaE SWP_RS03040 PF02470 MlaD protein SWP_RS03045 PF05494 MlaC protein SWP_RS03050 PF13466 STAS domain SWP_RS03055 PF01722 BolA-like protein SWP_RS03060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SWP_RS03065 PF13188 PAS domain SWP_RS03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS03065 PF00072 Response regulator receiver domain SWP_RS03065 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS03065 PF08448 PAS fold SWP_RS03070 PF00158 Sigma-54 interaction domain SWP_RS03070 PF02954 Bacterial regulatory protein, Fis family SWP_RS03070 PF00072 Response regulator receiver domain SWP_RS03080 PF13180 PDZ domain SWP_RS03085 PF00595 PDZ domain SWP_RS03085 PF13180 PDZ domain SWP_RS03095 PF03969 AFG1-like ATPase SWP_RS03100 PF00572 Ribosomal protein L13 SWP_RS03105 PF00380 Ribosomal protein S9/S16 SWP_RS03110 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SWP_RS03115 PF00709 Adenylosuccinate synthetase SWP_RS03120 PF08238 Sel1 repeat SWP_RS03125 PF00773 RNB domain SWP_RS03125 PF08206 Ribonuclease B OB domain SWP_RS03125 PF00575 S1 RNA binding domain SWP_RS03125 PF17876 Cold shock domain SWP_RS03125 PF08461 Ribonuclease R winged-helix domain SWP_RS03130 PF08032 RNA 2'-O ribose methyltransferase substrate binding SWP_RS03130 PF00588 SpoU rRNA Methylase family SWP_RS03135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SWP_RS03135 PF00326 Prolyl oligopeptidase family SWP_RS03145 PF01250 Ribosomal protein S6 SWP_RS03150 PF00436 Single-strand binding protein family SWP_RS03155 PF01084 Ribosomal protein S18 SWP_RS03160 PF03948 Ribosomal protein L9, C-terminal domain SWP_RS03160 PF01281 Ribosomal protein L9, N-terminal domain SWP_RS03165 PF00593 TonB dependent receptor SWP_RS03170 PF10459 Peptidase S46 SWP_RS03175 PF03796 DnaB-like helicase C terminal domain SWP_RS03175 PF00772 DnaB-like helicase N terminal domain SWP_RS03180 PF01168 Alanine racemase, N-terminal domain SWP_RS03180 PF00842 Alanine racemase, C-terminal domain SWP_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS03200 PF03466 LysR substrate binding domain SWP_RS03205 PF01568 Molydopterin dinucleotide binding domain SWP_RS03205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS03205 PF00384 Molybdopterin oxidoreductase SWP_RS03210 PF13247 4Fe-4S dicluster domain SWP_RS03210 PF12800 4Fe-4S binding domain SWP_RS03215 PF02613 Nitrate reductase delta subunit SWP_RS03230 PF01207 Dihydrouridine synthase (Dus) SWP_RS03245 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS03270 PF12848 ABC transporter SWP_RS03270 PF00005 ABC transporter SWP_RS03275 PF09526 Probable metal-binding protein (DUF2387) SWP_RS03285 PF03880 DbpA RNA binding domain SWP_RS03285 PF00270 DEAD/DEAH box helicase SWP_RS03285 PF00271 Helicase conserved C-terminal domain SWP_RS03295 PF00202 Aminotransferase class-III SWP_RS03300 PF04958 Arginine N-succinyltransferase beta subunit SWP_RS03305 PF00171 Aldehyde dehydrogenase family SWP_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS03320 PF00072 Response regulator receiver domain SWP_RS03320 PF00486 Transcriptional regulatory protein, C terminal SWP_RS03330 PF13545 Crp-like helix-turn-helix domain SWP_RS03330 PF00027 Cyclic nucleotide-binding domain SWP_RS03340 PF00485 Phosphoribulokinase / Uridine kinase family SWP_RS03345 PF06794 Uncharacterised protein family (UPF0270) SWP_RS03350 PF00561 alpha/beta hydrolase fold SWP_RS03360 PF05199 GMC oxidoreductase SWP_RS03360 PF00732 GMC oxidoreductase SWP_RS03365 PF02321 Outer membrane efflux protein SWP_RS03370 PF00293 NUDIX domain SWP_RS03375 PF06853 Protein of unknown function (DUF1249) SWP_RS03380 PF00149 Calcineurin-like phosphoesterase SWP_RS03385 PF05728 Uncharacterised protein family (UPF0227) SWP_RS03390 PF00204 DNA gyrase B SWP_RS03390 PF00986 DNA gyrase B subunit, carboxyl terminus SWP_RS03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS03390 PF01751 Toprim domain SWP_RS03395 PF07995 Glucose / Sorbosone dehydrogenase SWP_RS03400 PF03989 DNA gyrase C-terminal domain, beta-propeller SWP_RS03400 PF00521 DNA gyrase/topoisomerase IV, subunit A SWP_RS03405 PF04324 BFD-like [2Fe-2S] binding domain SWP_RS03410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS03420 PF03009 Glycerophosphoryl diester phosphodiesterase family SWP_RS03425 PF00924 Mechanosensitive ion channel SWP_RS03425 PF12795 Mechanosensitive ion channel porin domain SWP_RS03425 PF12794 Mechanosensitive ion channel inner membrane domain 1 SWP_RS03430 PF00892 EamA-like transporter family SWP_RS03435 PF02666 Phosphatidylserine decarboxylase SWP_RS03440 PF03193 RsgA GTPase SWP_RS03445 PF00929 Exonuclease SWP_RS03475 PF01256 Carbohydrate kinase SWP_RS03475 PF03853 YjeF-related protein N-terminus SWP_RS03480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SWP_RS03485 PF01520 N-acetylmuramoyl-L-alanine amidase SWP_RS03490 PF01119 DNA mismatch repair protein, C-terminal domain SWP_RS03490 PF08676 MutL C terminal dimerisation domain SWP_RS03500 PF17209 Hfq protein SWP_RS03505 PF01926 50S ribosome-binding GTPase SWP_RS03505 PF13167 GTP-binding GTPase N-terminal SWP_RS03505 PF16360 GTP-binding GTPase Middle Region SWP_RS03510 PF01145 SPFH domain / Band 7 family SWP_RS03510 PF12221 Bacterial membrane protein N terminal SWP_RS03515 PF01145 SPFH domain / Band 7 family SWP_RS03520 PF00355 Rieske [2Fe-2S] domain SWP_RS03520 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SWP_RS03525 PF00033 Cytochrome b/b6/petB SWP_RS03525 PF00032 Cytochrome b(C-terminal)/b6/petD SWP_RS03530 PF02167 Cytochrome C1 family SWP_RS03535 PF02798 Glutathione S-transferase, N-terminal domain SWP_RS03535 PF00043 Glutathione S-transferase, C-terminal domain SWP_RS03540 PF04386 Stringent starvation protein B SWP_RS03545 PF00117 Glutamine amidotransferase class-I SWP_RS03550 PF00326 Prolyl oligopeptidase family SWP_RS03555 PF00271 Helicase conserved C-terminal domain SWP_RS03555 PF00270 DEAD/DEAH box helicase SWP_RS03570 PF00664 ABC transporter transmembrane region SWP_RS03570 PF00005 ABC transporter SWP_RS03575 PF00005 ABC transporter SWP_RS03575 PF00664 ABC transporter transmembrane region SWP_RS03580 PF00672 HAMP domain SWP_RS03580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS03580 PF02743 Cache domain SWP_RS03585 PF14850 DNA-binding domain of Proline dehydrogenase SWP_RS03585 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SWP_RS03585 PF00171 Aldehyde dehydrogenase family SWP_RS03585 PF01619 Proline dehydrogenase SWP_RS03590 PF08239 Bacterial SH3 domain SWP_RS03595 PF01384 Phosphate transporter family SWP_RS03600 PF01865 Protein of unknown function DUF47 SWP_RS03605 PF01928 CYTH domain SWP_RS03610 PF07885 Ion channel SWP_RS03630 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) SWP_RS03650 PF03710 Glutamate-ammonia ligase adenylyltransferase SWP_RS03650 PF08335 GlnD PII-uridylyltransferase SWP_RS03680 PF03969 AFG1-like ATPase SWP_RS03685 PF05193 Peptidase M16 inactive domain SWP_RS03695 PF00158 Sigma-54 interaction domain SWP_RS03695 PF01590 GAF domain SWP_RS03705 PF03279 Bacterial lipid A biosynthesis acyltransferase SWP_RS03730 PF00145 C-5 cytosine-specific DNA methylase SWP_RS03730 PF12728 Helix-turn-helix domain SWP_RS03735 PF09570 SinI restriction endonuclease SWP_RS03755 PF01694 Rhomboid family SWP_RS03765 PF02233 NAD(P) transhydrogenase beta subunit SWP_RS03770 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SWP_RS03775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SWP_RS03775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SWP_RS03780 PF00175 Oxidoreductase NAD-binding domain SWP_RS03780 PF00258 Flavodoxin SWP_RS03780 PF00667 FAD binding domain SWP_RS03785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SWP_RS03785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SWP_RS03790 PF01507 Phosphoadenosine phosphosulfate reductase family SWP_RS03815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SWP_RS03825 PF05661 Protein of unknown function (DUF808) SWP_RS03845 PF16655 PhoD-like phosphatase, N-terminal domain SWP_RS03845 PF09423 PhoD-like phosphatase SWP_RS03855 PF01433 Peptidase family M1 domain SWP_RS03855 PF11838 ERAP1-like C-terminal domain SWP_RS03860 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SWP_RS03860 PF13036 Peptidoglycan-synthase activator LpoB SWP_RS03870 PF04102 SlyX SWP_RS03875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SWP_RS03875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS03885 PF06945 Protein of unknown function (DUF1289) SWP_RS03890 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS03890 PF00672 HAMP domain SWP_RS03895 PF00486 Transcriptional regulatory protein, C terminal SWP_RS03895 PF00072 Response regulator receiver domain SWP_RS03920 PF00582 Universal stress protein family SWP_RS03935 PF00106 short chain dehydrogenase SWP_RS03945 PF03358 NADPH-dependent FMN reductase SWP_RS03955 PF01479 S4 domain SWP_RS03955 PF00849 RNA pseudouridylate synthase SWP_RS03970 PF01184 GPR1/FUN34/yaaH family SWP_RS03975 PF07690 Major Facilitator Superfamily SWP_RS03985 PF04172 LrgB-like family SWP_RS03990 PF03788 LrgA family SWP_RS04000 PF00133 tRNA synthetases class I (I, L, M and V) SWP_RS04000 PF08264 Anticodon-binding domain of tRNA SWP_RS04000 PF10458 Valyl tRNA synthetase tRNA binding arm SWP_RS04005 PF04364 DNA polymerase III chi subunit, HolC SWP_RS04020 PF05164 Cell division protein ZapA SWP_RS04025 PF03695 Uncharacterised protein family (UPF0149) SWP_RS04030 PF01494 FAD binding domain SWP_RS04035 PF01494 FAD binding domain SWP_RS04040 PF01571 Aminomethyltransferase folate-binding domain SWP_RS04040 PF08669 Glycine cleavage T-protein C-terminal barrel domain SWP_RS04045 PF01597 Glycine cleavage H-protein SWP_RS04050 PF02347 Glycine cleavage system P-protein SWP_RS04065 PF02335 Cytochrome c552 SWP_RS04085 PF00593 TonB dependent receptor SWP_RS04085 PF07715 TonB-dependent Receptor Plug Domain SWP_RS04095 PF00449 Urease alpha-subunit, N-terminal domain SWP_RS04095 PF01979 Amidohydrolase family SWP_RS04110 PF00361 Proton-conducting membrane transporter SWP_RS04120 PF00361 Proton-conducting membrane transporter SWP_RS04125 PF00361 Proton-conducting membrane transporter SWP_RS04130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SWP_RS04140 PF03334 Na+/H+ antiporter subunit SWP_RS04165 PF03553 Na+/H+ antiporter family SWP_RS04175 PF01804 Penicillin amidase SWP_RS04195 PF00106 short chain dehydrogenase SWP_RS04200 PF00593 TonB dependent receptor SWP_RS04200 PF07715 TonB-dependent Receptor Plug Domain SWP_RS04205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SWP_RS04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS04260 PF03466 LysR substrate binding domain SWP_RS04270 PF03466 LysR substrate binding domain SWP_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS04275 PF00171 Aldehyde dehydrogenase family SWP_RS04280 PF00202 Aminotransferase class-III SWP_RS04285 PF01645 Conserved region in glutamate synthase SWP_RS04285 PF13187 4Fe-4S dicluster domain SWP_RS04290 PF00202 Aminotransferase class-III SWP_RS04295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SWP_RS04305 PF01909 Nucleotidyltransferase domain SWP_RS04305 PF01966 HD domain SWP_RS04305 PF08335 GlnD PII-uridylyltransferase SWP_RS04315 PF01156 Inosine-uridine preferring nucleoside hydrolase SWP_RS04320 PF16197 Ketoacyl-synthetase C-terminal extension SWP_RS04320 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS04320 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS04320 PF08659 KR domain SWP_RS04320 PF00550 Phosphopantetheine attachment site SWP_RS04320 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS04320 PF14765 Polyketide synthase dehydratase SWP_RS04320 PF00698 Acyl transferase domain SWP_RS04325 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS04325 PF00107 Zinc-binding dehydrogenase SWP_RS04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS04345 PF03466 LysR substrate binding domain SWP_RS04360 PF02607 B12 binding domain SWP_RS04360 PF02310 B12 binding domain SWP_RS04360 PF00809 Pterin binding enzyme SWP_RS04360 PF02574 Homocysteine S-methyltransferase SWP_RS04360 PF02965 Vitamin B12 dependent methionine synthase, activation domain SWP_RS04370 PF00005 ABC transporter SWP_RS04375 PF01032 FecCD transport family SWP_RS04380 PF02277 Phosphoribosyltransferase SWP_RS04385 PF02654 Cobalamin-5-phosphate synthase SWP_RS04390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SWP_RS04395 PF07685 CobB/CobQ-like glutamine amidotransferase domain SWP_RS04395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SWP_RS04400 PF12557 Cob(I)alamin adenosyltransferase N terminal SWP_RS04400 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SWP_RS04475 PF00664 ABC transporter transmembrane region SWP_RS04475 PF03412 Peptidase C39 family SWP_RS04475 PF00005 ABC transporter SWP_RS04490 PF06594 Haemolysin-type calcium binding protein related domain SWP_RS04490 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SWP_RS04530 PF01497 Periplasmic binding protein SWP_RS04535 PF07690 Major Facilitator Superfamily SWP_RS04560 PF00005 ABC transporter SWP_RS04560 PF03412 Peptidase C39 family SWP_RS04560 PF00664 ABC transporter transmembrane region SWP_RS04575 PF04055 Radical SAM superfamily SWP_RS04575 PF13186 Iron-sulfur cluster-binding domain SWP_RS04595 PF00005 ABC transporter SWP_RS04600 PF00005 ABC transporter SWP_RS04600 PF02687 FtsX-like permease family SWP_RS04600 PF12704 MacB-like periplasmic core domain SWP_RS04605 PF12704 MacB-like periplasmic core domain SWP_RS04605 PF00005 ABC transporter SWP_RS04605 PF02687 FtsX-like permease family SWP_RS04610 PF02954 Bacterial regulatory protein, Fis family SWP_RS04610 PF00072 Response regulator receiver domain SWP_RS04610 PF00158 Sigma-54 interaction domain SWP_RS04615 PF00989 PAS fold SWP_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS04615 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS04620 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS04620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS04625 PF00873 AcrB/AcrD/AcrF family SWP_RS04630 PF02321 Outer membrane efflux protein SWP_RS04640 PF00440 Bacterial regulatory proteins, tetR family SWP_RS04645 PF00171 Aldehyde dehydrogenase family SWP_RS04655 PF00582 Universal stress protein family SWP_RS04705 PF00486 Transcriptional regulatory protein, C terminal SWP_RS04705 PF00072 Response regulator receiver domain SWP_RS04715 PF00072 Response regulator receiver domain SWP_RS04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS04715 PF01627 Hpt domain SWP_RS04715 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS04715 PF00672 HAMP domain SWP_RS04730 PF00313 'Cold-shock' DNA-binding domain SWP_RS04740 PF00753 Metallo-beta-lactamase superfamily SWP_RS04740 PF00301 Rubredoxin SWP_RS04740 PF00258 Flavodoxin SWP_RS04745 PF18113 Rubredoxin binding C-terminal domain SWP_RS04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS04755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SWP_RS04760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS04765 PF00106 short chain dehydrogenase SWP_RS04785 PF00563 EAL domain SWP_RS04785 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS04785 PF03707 Bacterial signalling protein N terminal repeat SWP_RS04795 PF00072 Response regulator receiver domain SWP_RS04795 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS04795 PF09308 LuxQ, periplasmic SWP_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS04815 PF05649 Peptidase family M13 SWP_RS04815 PF01431 Peptidase family M13 SWP_RS04840 PF00881 Nitroreductase family SWP_RS04855 PF01145 SPFH domain / Band 7 family SWP_RS04875 PF02554 Carbon starvation protein CstA SWP_RS04890 PF04539 Sigma-70 region 3 SWP_RS04890 PF04542 Sigma-70 region 2 SWP_RS04890 PF03979 Sigma-70 factor, region 1.1 SWP_RS04890 PF04546 Sigma-70, non-essential region SWP_RS04890 PF00140 Sigma-70 factor, region 1.2 SWP_RS04890 PF04545 Sigma-70, region 4 SWP_RS04895 PF08275 DNA primase catalytic core, N-terminal domain SWP_RS04895 PF08278 DNA primase DnaG DnaB-binding SWP_RS04895 PF10410 DnaB-helicase binding domain of primase SWP_RS04895 PF01807 CHC2 zinc finger SWP_RS04900 PF09424 Yqey-like protein SWP_RS04905 PF01165 Ribosomal protein S21 SWP_RS04910 PF00814 Glycoprotease family SWP_RS04915 PF02660 Glycerol-3-phosphate acyltransferase SWP_RS04920 PF02152 Dihydroneopterin aldolase SWP_RS04925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SWP_RS04930 PF02673 Bacitracin resistance protein BacA SWP_RS04935 PF13847 Methyltransferase domain SWP_RS04940 PF17969 L,D-transpeptidase C-terminal domain SWP_RS04940 PF01476 LysM domain SWP_RS04940 PF03734 L,D-transpeptidase catalytic domain SWP_RS04950 PF01743 Poly A polymerase head domain SWP_RS04950 PF12627 Probable RNA and SrmB- binding site of polymerase A SWP_RS04950 PF01966 HD domain SWP_RS04955 PF01471 Putative peptidoglycan binding domain SWP_RS04955 PF13401 AAA domain SWP_RS04965 PF03600 Citrate transporter SWP_RS04975 PF00202 Aminotransferase class-III SWP_RS04980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SWP_RS04980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SWP_RS04990 PF02424 ApbE family SWP_RS04995 PF01790 Prolipoprotein diacylglyceryl transferase SWP_RS05000 PF00593 TonB dependent receptor SWP_RS05000 PF07715 TonB-dependent Receptor Plug Domain SWP_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS05015 PF03466 LysR substrate binding domain SWP_RS05020 PF04247 Invasion gene expression up-regulator, SirB SWP_RS05035 PF00793 DAHP synthetase I family SWP_RS05040 PF03806 AbgT putative transporter family SWP_RS05055 PF00209 Sodium:neurotransmitter symporter family SWP_RS05060 PF02558 Ketopantoate reductase PanE/ApbA SWP_RS05060 PF08546 Ketopantoate reductase PanE/ApbA C terminal SWP_RS05070 PF04461 Protein of unknown function (DUF520) SWP_RS05075 PF07690 Major Facilitator Superfamily SWP_RS05085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SWP_RS05105 PF04116 Fatty acid hydroxylase superfamily SWP_RS05120 PF05175 Methyltransferase small domain SWP_RS05135 PF01722 BolA-like protein SWP_RS05140 PF02664 S-Ribosylhomocysteinase (LuxS) SWP_RS05145 PF11973 NQRA C-terminal domain SWP_RS05145 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SWP_RS05150 PF03116 NQR2, RnfD, RnfE family SWP_RS05155 PF04205 FMN-binding domain SWP_RS05160 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS05165 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS05170 PF00970 Oxidoreductase FAD-binding domain SWP_RS05170 PF00175 Oxidoreductase NAD-binding domain SWP_RS05170 PF00111 2Fe-2S iron-sulfur cluster binding domain SWP_RS05175 PF02424 ApbE family SWP_RS05180 PF04400 (Na+)-NQR maturation NqrM SWP_RS05185 PF00210 Ferritin-like domain SWP_RS05190 PF00210 Ferritin-like domain SWP_RS05200 PF02743 Cache domain SWP_RS05200 PF00672 HAMP domain SWP_RS05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS05205 PF11798 IMS family HHH motif SWP_RS05205 PF11799 impB/mucB/samB family C-terminal domain SWP_RS05205 PF00817 impB/mucB/samB family SWP_RS05210 PF07687 Peptidase dimerisation domain SWP_RS05210 PF01546 Peptidase family M20/M25/M40 SWP_RS05215 PF02789 Cytosol aminopeptidase family, N-terminal domain SWP_RS05215 PF00883 Cytosol aminopeptidase family, catalytic domain SWP_RS05245 PF00860 Permease family SWP_RS05250 PF01472 PUA domain SWP_RS05250 PF00696 Amino acid kinase family SWP_RS05255 PF00171 Aldehyde dehydrogenase family SWP_RS05265 PF00892 EamA-like transporter family SWP_RS05270 PF00012 Hsp70 protein SWP_RS05275 PF00684 DnaJ central domain SWP_RS05275 PF01556 DnaJ C terminal domain SWP_RS05275 PF00226 DnaJ domain SWP_RS05285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS05285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SWP_RS05290 PF05173 Dihydrodipicolinate reductase, C-terminus SWP_RS05290 PF01113 Dihydrodipicolinate reductase, N-terminus SWP_RS05295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SWP_RS05295 PF00117 Glutamine amidotransferase class-I SWP_RS05300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SWP_RS05300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SWP_RS05300 PF02142 MGS-like domain SWP_RS05305 PF03449 Transcription elongation factor, N-terminal SWP_RS05305 PF01272 Transcription elongation factor, GreA/GreB, C-term SWP_RS05315 PF07549 SecD/SecF GG Motif SWP_RS05315 PF13721 SecD export protein N-terminal TM region SWP_RS05315 PF02355 Protein export membrane protein SWP_RS05320 PF02355 Protein export membrane protein SWP_RS05320 PF07549 SecD/SecF GG Motif SWP_RS05325 PF01985 CRS1 / YhbY (CRM) domain SWP_RS05330 PF01728 FtsJ-like methyltransferase SWP_RS05335 PF06480 FtsH Extracellular SWP_RS05335 PF01434 Peptidase family M41 SWP_RS05335 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS05335 PF17862 AAA+ lid domain SWP_RS05340 PF00809 Pterin binding enzyme SWP_RS05345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SWP_RS05345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SWP_RS05345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SWP_RS05345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SWP_RS05350 PF00121 Triosephosphate isomerase SWP_RS05355 PF03840 Preprotein translocase SecG subunit SWP_RS05370 PF02576 RimP N-terminal domain SWP_RS05370 PF17384 RimP C-terminal SH3 domain SWP_RS05375 PF00575 S1 RNA binding domain SWP_RS05375 PF08529 NusA N-terminal domain SWP_RS05375 PF13184 NusA-like KH domain SWP_RS05380 PF00009 Elongation factor Tu GTP binding domain SWP_RS05380 PF11987 Translation-initiation factor 2 SWP_RS05380 PF08364 Bacterial translation initiation factor IF-2 associated region SWP_RS05380 PF04760 Translation initiation factor IF-2, N-terminal region SWP_RS05385 PF02033 Ribosome-binding factor A SWP_RS05390 PF01509 TruB family pseudouridylate synthase (N terminal domain) SWP_RS05390 PF16198 tRNA pseudouridylate synthase B C-terminal domain SWP_RS05390 PF09157 Pseudouridine synthase II TruB, C-terminal SWP_RS05395 PF00312 Ribosomal protein S15 SWP_RS05400 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS05400 PF00563 EAL domain SWP_RS05400 PF03707 Bacterial signalling protein N terminal repeat SWP_RS05405 PF01138 3' exoribonuclease family, domain 1 SWP_RS05405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SWP_RS05405 PF00575 S1 RNA binding domain SWP_RS05405 PF00013 KH domain SWP_RS05405 PF03725 3' exoribonuclease family, domain 2 SWP_RS05410 PF13181 Tetratricopeptide repeat SWP_RS05410 PF07719 Tetratricopeptide repeat SWP_RS05415 PF16658 Class II release factor RF3, C-terminal domain SWP_RS05415 PF00009 Elongation factor Tu GTP binding domain SWP_RS05420 PF01026 TatD related DNase SWP_RS05425 PF01773 Na+ dependent nucleoside transporter N-terminus SWP_RS05425 PF07670 Nucleoside recognition SWP_RS05425 PF07662 Na+ dependent nucleoside transporter C-terminus SWP_RS05430 PF03502 Nucleoside-specific channel-forming protein, Tsx SWP_RS05435 PF01791 DeoC/LacD family aldolase SWP_RS05440 PF02885 Glycosyl transferase family, helical bundle domain SWP_RS05440 PF00591 Glycosyl transferase family, a/b domain SWP_RS05440 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SWP_RS05450 PF01048 Phosphorylase superfamily SWP_RS05460 PF18429 Domain of unknown function (DUF5609) SWP_RS05470 PF00072 Response regulator receiver domain SWP_RS05470 PF00196 Bacterial regulatory proteins, luxR family SWP_RS05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS05475 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS05480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS05480 PF01568 Molydopterin dinucleotide binding domain SWP_RS05480 PF00384 Molybdopterin oxidoreductase SWP_RS05485 PF13247 4Fe-4S dicluster domain SWP_RS05490 PF03916 Polysulphide reductase, NrfD SWP_RS05500 PF18073 Rubredoxin metal binding domain SWP_RS05505 PF07238 PilZ domain SWP_RS05520 PF00270 DEAD/DEAH box helicase SWP_RS05520 PF00271 Helicase conserved C-terminal domain SWP_RS05560 PF00860 Permease family SWP_RS05575 PF07670 Nucleoside recognition SWP_RS05580 PF08447 PAS fold SWP_RS05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS05590 PF01136 Peptidase family U32 SWP_RS05595 PF01136 Peptidase family U32 SWP_RS05600 PF02036 SCP-2 sterol transfer family SWP_RS05605 PF04381 Putative exonuclease, RdgC SWP_RS05615 PF00072 Response regulator receiver domain SWP_RS05615 PF00486 Transcriptional regulatory protein, C terminal SWP_RS05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS05620 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS05620 PF11808 Phosphate regulon sensor protein PhoR SWP_RS05620 PF00989 PAS fold SWP_RS05625 PF12849 PBP superfamily domain SWP_RS05635 PF01433 Peptidase family M1 domain SWP_RS05640 PF00255 Glutathione peroxidase SWP_RS05670 PF01029 NusB family SWP_RS05670 PF01189 16S rRNA methyltransferase RsmB/F SWP_RS05690 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SWP_RS05695 PF00691 OmpA family SWP_RS05695 PF01389 OmpA-like transmembrane domain SWP_RS05700 PF05552 Conserved TM helix SWP_RS05700 PF00924 Mechanosensitive ion channel SWP_RS05705 PF03458 UPF0126 domain SWP_RS05710 PF01212 Beta-eliminating lyase SWP_RS05720 PF00245 Alkaline phosphatase SWP_RS05725 PF00245 Alkaline phosphatase SWP_RS05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS05750 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS05750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS05755 PF00873 AcrB/AcrD/AcrF family SWP_RS05760 PF01022 Bacterial regulatory protein, arsR family SWP_RS05795 PF00465 Iron-containing alcohol dehydrogenase SWP_RS05800 PF02446 4-alpha-glucanotransferase SWP_RS05805 PF00128 Alpha amylase, catalytic domain SWP_RS05805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SWP_RS05805 PF02806 Alpha amylase, C-terminal all-beta domain SWP_RS05810 PF00128 Alpha amylase, catalytic domain SWP_RS05810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SWP_RS05815 PF00343 Carbohydrate phosphorylase SWP_RS05820 PF00483 Nucleotidyl transferase SWP_RS05825 PF08323 Starch synthase catalytic domain SWP_RS05825 PF00534 Glycosyl transferases group 1 SWP_RS05870 PF00873 AcrB/AcrD/AcrF family SWP_RS05875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS05895 PF12848 ABC transporter SWP_RS05895 PF00005 ABC transporter SWP_RS05905 PF00464 Serine hydroxymethyltransferase SWP_RS05910 PF03477 ATP cone domain SWP_RS05915 PF01872 RibD C-terminal domain SWP_RS05915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SWP_RS05920 PF00677 Lumazine binding domain SWP_RS05925 PF00925 GTP cyclohydrolase II SWP_RS05925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SWP_RS05930 PF00885 6,7-dimethyl-8-ribityllumazine synthase SWP_RS05935 PF01029 NusB family SWP_RS05940 PF00586 AIR synthase related protein, N-terminal domain SWP_RS05940 PF02769 AIR synthase related protein, C-terminal domain SWP_RS05945 PF04608 Phosphatidylglycerophosphatase A SWP_RS05950 PF02463 RecF/RecN/SMC N terminal domain SWP_RS05960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS05960 PF03466 LysR substrate binding domain SWP_RS05965 PF04222 Protein of unknown function (DUF416) SWP_RS05970 PF01627 Hpt domain SWP_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS05970 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS05970 PF00072 Response regulator receiver domain SWP_RS05970 PF00672 HAMP domain SWP_RS05970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS05975 PF01938 TRAM domain SWP_RS05975 PF05958 tRNA (Uracil-5-)-methyltransferase SWP_RS05980 PF02824 TGS domain SWP_RS05980 PF13291 ACT domain SWP_RS05980 PF04607 Region found in RelA / SpoT proteins SWP_RS05985 PF03819 MazG nucleotide pyrophosphohydrolase domain SWP_RS05990 PF06418 CTP synthase N-terminus SWP_RS05990 PF00117 Glutamine amidotransferase class-I SWP_RS05995 PF03952 Enolase, N-terminal domain SWP_RS05995 PF00113 Enolase, C-terminal TIM barrel domain SWP_RS06000 PF04977 Septum formation initiator SWP_RS06005 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SWP_RS06010 PF02542 YgbB family SWP_RS06015 PF01142 tRNA pseudouridine synthase D (TruD) SWP_RS06020 PF01975 Survival protein SurE SWP_RS06030 PF01551 Peptidase family M23 SWP_RS06030 PF01476 LysM domain SWP_RS06035 PF00140 Sigma-70 factor, region 1.2 SWP_RS06035 PF04545 Sigma-70, region 4 SWP_RS06035 PF04542 Sigma-70 region 2 SWP_RS06035 PF04539 Sigma-70 region 3 SWP_RS06040 PF01624 MutS domain I SWP_RS06040 PF05188 MutS domain II SWP_RS06040 PF00488 MutS domain V SWP_RS06040 PF05192 MutS domain III SWP_RS06040 PF05190 MutS family domain IV SWP_RS06045 PF00154 recA bacterial DNA recombination protein SWP_RS06050 PF02272 DHHA1 domain SWP_RS06050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SWP_RS06050 PF01411 tRNA synthetases class II (A) SWP_RS06055 PF02599 Global regulator protein family SWP_RS06095 PF00884 Sulfatase SWP_RS06100 PF17863 AAA lid domain SWP_RS06100 PF07726 ATPase family associated with various cellular activities (AAA) SWP_RS06130 PF04277 Oxaloacetate decarboxylase, gamma chain SWP_RS06135 PF02436 Conserved carboxylase domain SWP_RS06135 PF00682 HMGL-like SWP_RS06135 PF00364 Biotin-requiring enzyme SWP_RS06140 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SWP_RS06145 PF00005 ABC transporter SWP_RS06145 PF00664 ABC transporter transmembrane region SWP_RS06150 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS06150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS06165 PF00375 Sodium:dicarboxylate symporter family SWP_RS06170 PF05193 Peptidase M16 inactive domain SWP_RS06170 PF00675 Insulinase (Peptidase family M16) SWP_RS06175 PF04262 Glutamate-cysteine ligase SWP_RS06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS06190 PF00672 HAMP domain SWP_RS06190 PF02743 Cache domain SWP_RS06195 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS06200 PF00731 AIR carboxylase SWP_RS06220 PF07676 WD40-like Beta Propeller Repeat SWP_RS06220 PF14684 Tricorn protease C1 domain SWP_RS06220 PF14685 Tricorn protease PDZ domain SWP_RS06220 PF03572 Peptidase family S41 SWP_RS06240 PF00072 Response regulator receiver domain SWP_RS06265 PF13439 Glycosyltransferase Family 4 SWP_RS06265 PF00534 Glycosyl transferases group 1 SWP_RS06270 PF00375 Sodium:dicarboxylate symporter family SWP_RS06290 PF00881 Nitroreductase family SWP_RS06295 PF08274 PhnA Zinc-Ribbon SWP_RS06295 PF03831 PhnA domain SWP_RS06305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SWP_RS06305 PF06481 COX Aromatic Rich Motif SWP_RS06310 PF00115 Cytochrome C and Quinol oxidase polypeptide I SWP_RS06315 PF00510 Cytochrome c oxidase subunit III SWP_RS06320 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SWP_RS06325 PF01040 UbiA prenyltransferase family SWP_RS06330 PF01432 Peptidase family M3 SWP_RS06335 PF01668 SmpB protein SWP_RS06340 PF03364 Polyketide cyclase / dehydrase and lipid transport SWP_RS06345 PF03658 RnfH family Ubiquitin SWP_RS06350 PF04355 SmpA / OmlA family SWP_RS06355 PF01274 Malate synthase SWP_RS06370 PF06167 Glucose-regulated metallo-peptidase M90 SWP_RS06385 PF12843 Putative quorum-sensing-regulated virulence factor SWP_RS06405 PF02872 5'-nucleotidase, C-terminal domain SWP_RS06405 PF00149 Calcineurin-like phosphoesterase SWP_RS06410 PF00571 CBS domain SWP_RS06410 PF01595 Cyclin M transmembrane N-terminal domain SWP_RS06425 PF13464 Domain of unknown function (DUF4115) SWP_RS06430 PF04551 GcpE protein SWP_RS06435 PF03129 Anticodon binding domain SWP_RS06435 PF13393 Histidyl-tRNA synthetase SWP_RS06440 PF09976 Tetratricopeptide repeat-like domain SWP_RS06445 PF13360 PQQ-like domain SWP_RS06450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SWP_RS06450 PF01926 50S ribosome-binding GTPase SWP_RS06465 PF01381 Helix-turn-helix SWP_RS06490 PF02601 Exonuclease VII, large subunit SWP_RS06490 PF13742 OB-fold nucleic acid binding domain SWP_RS06495 PF00478 IMP dehydrogenase / GMP reductase domain SWP_RS06495 PF00571 CBS domain SWP_RS06500 PF00958 GMP synthase C terminal domain SWP_RS06500 PF00117 Glutamine amidotransferase class-I SWP_RS06500 PF02540 NAD synthase SWP_RS06505 PF14437 MafB19-like deaminase SWP_RS06510 PF00497 Bacterial extracellular solute-binding proteins, family 3 SWP_RS06510 PF01464 Transglycosylase SLT domain SWP_RS06515 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SWP_RS06515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SWP_RS06515 PF02769 AIR synthase related protein, C-terminal domain SWP_RS06520 PF01654 Cytochrome bd terminal oxidase subunit I SWP_RS06525 PF02322 Cytochrome bd terminal oxidase subunit II SWP_RS06535 PF00672 HAMP domain SWP_RS06535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS06535 PF12729 Four helix bundle sensory module for signal transduction SWP_RS06540 PF00873 AcrB/AcrD/AcrF family SWP_RS06570 PF02743 Cache domain SWP_RS06570 PF00672 HAMP domain SWP_RS06570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS06605 PF08453 Peptidase family M9 N-terminal SWP_RS06605 PF01752 Collagenase SWP_RS06645 PF01584 CheW-like domain SWP_RS06645 PF00072 Response regulator receiver domain SWP_RS06650 PF03705 CheR methyltransferase, all-alpha domain SWP_RS06650 PF01739 CheR methyltransferase, SAM binding domain SWP_RS06655 PF00460 Flagella basal body rod protein SWP_RS06660 PF00460 Flagella basal body rod protein SWP_RS06660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS06670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS06670 PF07559 Flagellar basal body protein FlaE SWP_RS06670 PF00460 Flagella basal body rod protein SWP_RS06675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS06675 PF00460 Flagella basal body rod protein SWP_RS06680 PF00460 Flagella basal body rod protein SWP_RS06680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS06685 PF02107 Flagellar L-ring protein SWP_RS06690 PF02119 Flagellar P-ring protein SWP_RS06695 PF10135 Rod binding protein SWP_RS06695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SWP_RS06700 PF07196 Flagellin hook IN motif SWP_RS06700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS06710 PF07196 Flagellin hook IN motif SWP_RS06710 PF00700 Bacterial flagellin C-terminal helical region SWP_RS06710 PF00669 Bacterial flagellin N-terminal helical region SWP_RS06715 PF00669 Bacterial flagellin N-terminal helical region SWP_RS06715 PF00700 Bacterial flagellin C-terminal helical region SWP_RS06715 PF07196 Flagellin hook IN motif SWP_RS06720 PF03646 FlaG protein SWP_RS06725 PF02465 Flagellar hook-associated protein 2 N-terminus SWP_RS06725 PF07195 Flagellar hook-associated protein 2 C-terminus SWP_RS06725 PF07196 Flagellin hook IN motif SWP_RS06735 PF02561 Flagellar protein FliS SWP_RS06740 PF06490 Flagellar regulatory protein FleQ SWP_RS06740 PF02954 Bacterial regulatory protein, Fis family SWP_RS06740 PF00158 Sigma-54 interaction domain SWP_RS06745 PF13188 PAS domain SWP_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS06745 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS06750 PF02954 Bacterial regulatory protein, Fis family SWP_RS06750 PF00158 Sigma-54 interaction domain SWP_RS06750 PF00072 Response regulator receiver domain SWP_RS06755 PF02049 Flagellar hook-basal body complex protein FliE SWP_RS06760 PF01514 Secretory protein of YscJ/FliF family SWP_RS06760 PF08345 Flagellar M-ring protein C-terminal SWP_RS06765 PF14842 FliG N-terminal domain SWP_RS06765 PF14841 FliG middle domain SWP_RS06765 PF01706 FliG C-terminal domain SWP_RS06775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SWP_RS06775 PF18269 T3SS EscN ATPase C-terminal domain SWP_RS06780 PF02050 Flagellar FliJ protein SWP_RS06795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SWP_RS06795 PF02154 Flagellar motor switch protein FliM SWP_RS06800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SWP_RS06805 PF04347 Flagellar biosynthesis protein, FliO SWP_RS06810 PF00813 FliP family SWP_RS06815 PF01313 Bacterial export proteins, family 3 SWP_RS06820 PF01311 Bacterial export proteins, family 1 SWP_RS06825 PF01312 FlhB HrpN YscU SpaS Family SWP_RS06830 PF00771 FHIPEP family SWP_RS06835 PF00448 SRP54-type protein, GTPase domain SWP_RS06840 PF10609 NUBPL iron-transfer P-loop NTPase SWP_RS06845 PF04539 Sigma-70 region 3 SWP_RS06845 PF04545 Sigma-70, region 4 SWP_RS06845 PF04542 Sigma-70 region 2 SWP_RS06850 PF00072 Response regulator receiver domain SWP_RS06855 PF04344 Chemotaxis phosphatase, CheZ SWP_RS06860 PF01584 CheW-like domain SWP_RS06860 PF00072 Response regulator receiver domain SWP_RS06860 PF01627 Hpt domain SWP_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS06860 PF02895 Signal transducing histidine kinase, homodimeric domain SWP_RS06865 PF00072 Response regulator receiver domain SWP_RS06865 PF01339 CheB methylesterase SWP_RS06875 PF13614 AAA domain SWP_RS06885 PF01584 CheW-like domain SWP_RS06905 PF04333 MlaA lipoprotein SWP_RS06915 PF00854 POT family SWP_RS06935 PF02397 Bacterial sugar transferase SWP_RS06945 PF00535 Glycosyl transferase family 2 SWP_RS06955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS06955 PF01842 ACT domain SWP_RS06955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SWP_RS06995 PF02563 Polysaccharide biosynthesis/export protein SWP_RS06995 PF10531 SLBB domain SWP_RS06995 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SWP_RS07000 PF01451 Low molecular weight phosphotyrosine protein phosphatase SWP_RS07005 PF02706 Chain length determinant protein SWP_RS07005 PF13807 G-rich domain on putative tyrosine kinase SWP_RS07005 PF13614 AAA domain SWP_RS07010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SWP_RS07010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SWP_RS07010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SWP_RS07015 PF01370 NAD dependent epimerase/dehydratase family SWP_RS07035 PF00534 Glycosyl transferases group 1 SWP_RS07035 PF13477 Glycosyl transferase 4-like SWP_RS07050 PF02397 Bacterial sugar transferase SWP_RS07055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SWP_RS07060 PF01507 Phosphoadenosine phosphosulfate reductase family SWP_RS07065 PF00009 Elongation factor Tu GTP binding domain SWP_RS07070 PF02080 TrkA-C domain SWP_RS07070 PF03600 Citrate transporter SWP_RS07085 PF02719 Polysaccharide biosynthesis protein SWP_RS07100 PF16363 GDP-mannose 4,6 dehydratase SWP_RS07110 PF00753 Metallo-beta-lactamase superfamily SWP_RS07110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SWP_RS07110 PF10996 Beta-Casp domain SWP_RS07115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SWP_RS07125 PF01467 Cytidylyltransferase-like SWP_RS07130 PF00483 Nucleotidyl transferase SWP_RS07135 PF02397 Bacterial sugar transferase SWP_RS07140 PF00535 Glycosyl transferase family 2 SWP_RS07145 PF14667 Polysaccharide biosynthesis C-terminal domain SWP_RS07145 PF01943 Polysaccharide biosynthesis protein SWP_RS07165 PF01740 STAS domain SWP_RS07175 PF00072 Response regulator receiver domain SWP_RS07175 PF00486 Transcriptional regulatory protein, C terminal SWP_RS07185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS07185 PF00072 Response regulator receiver domain SWP_RS07185 PF01627 Hpt domain SWP_RS07185 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS07185 PF00672 HAMP domain SWP_RS07190 PF00072 Response regulator receiver domain SWP_RS07190 PF00158 Sigma-54 interaction domain SWP_RS07190 PF02954 Bacterial regulatory protein, Fis family SWP_RS07195 PF02811 PHP domain SWP_RS07200 PF04321 RmlD substrate binding domain SWP_RS07210 PF14310 Fibronectin type III-like domain SWP_RS07210 PF00933 Glycosyl hydrolase family 3 N terminal domain SWP_RS07210 PF01915 Glycosyl hydrolase family 3 C-terminal domain SWP_RS07220 PF04820 Tryptophan halogenase SWP_RS07235 PF04820 Tryptophan halogenase SWP_RS07245 PF00356 Bacterial regulatory proteins, lacI family SWP_RS07255 PF00232 Glycosyl hydrolase family 1 SWP_RS07260 PF07690 Major Facilitator Superfamily SWP_RS07265 PF00933 Glycosyl hydrolase family 3 N terminal domain SWP_RS07265 PF01915 Glycosyl hydrolase family 3 C-terminal domain SWP_RS07265 PF14310 Fibronectin type III-like domain SWP_RS07270 PF00722 Glycosyl hydrolases family 16 SWP_RS07275 PF00459 Inositol monophosphatase family SWP_RS07280 PF00480 ROK family SWP_RS07285 PF02698 DUF218 domain SWP_RS07300 PF13187 4Fe-4S dicluster domain SWP_RS07300 PF12800 4Fe-4S binding domain SWP_RS07300 PF00037 4Fe-4S binding domain SWP_RS07305 PF16363 GDP-mannose 4,6 dehydratase SWP_RS07310 PF00483 Nucleotidyl transferase SWP_RS07315 PF00351 Biopterin-dependent aromatic amino acid hydroxylase SWP_RS07320 PF01329 Pterin 4 alpha carbinolamine dehydratase SWP_RS07325 PF00158 Sigma-54 interaction domain SWP_RS07325 PF18024 Helix-turn-helix domain SWP_RS07335 PF14497 Glutathione S-transferase, C-terminal domain SWP_RS07335 PF02798 Glutathione S-transferase, N-terminal domain SWP_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS07340 PF03466 LysR substrate binding domain SWP_RS07345 PF07690 Major Facilitator Superfamily SWP_RS07375 PF00749 tRNA synthetases class I (E and Q), catalytic domain SWP_RS07420 PF00664 ABC transporter transmembrane region SWP_RS07420 PF00005 ABC transporter SWP_RS07425 PF02805 Metal binding domain of Ada SWP_RS07425 PF06029 AlkA N-terminal domain SWP_RS07425 PF00730 HhH-GPD superfamily base excision DNA repair protein SWP_RS07425 PF12833 Helix-turn-helix domain SWP_RS07430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SWP_RS07430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SWP_RS07435 PF00271 Helicase conserved C-terminal domain SWP_RS07435 PF00270 DEAD/DEAH box helicase SWP_RS07445 PF13091 PLD-like domain SWP_RS07450 PF01584 CheW-like domain SWP_RS07450 PF00072 Response regulator receiver domain SWP_RS07455 PF00375 Sodium:dicarboxylate symporter family SWP_RS07460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SWP_RS07470 PF00849 RNA pseudouridylate synthase SWP_RS07475 PF04336 Acyl carrier protein phosphodiesterase SWP_RS07480 PF02547 Queuosine biosynthesis protein SWP_RS07485 PF01702 Queuine tRNA-ribosyltransferase SWP_RS07490 PF02699 Preprotein translocase subunit SWP_RS07495 PF02355 Protein export membrane protein SWP_RS07495 PF13721 SecD export protein N-terminal TM region SWP_RS07495 PF07549 SecD/SecF GG Motif SWP_RS07500 PF02355 Protein export membrane protein SWP_RS07500 PF07549 SecD/SecF GG Motif SWP_RS07515 PF10414 Sirohaem synthase dimerisation region SWP_RS07515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SWP_RS07520 PF07152 YaeQ protein SWP_RS07525 PF10678 Protein of unknown function (DUF2492) SWP_RS07535 PF00459 Inositol monophosphatase family SWP_RS07540 PF00588 SpoU rRNA Methylase family SWP_RS07545 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS07550 PF02082 Transcriptional regulator SWP_RS07555 PF00266 Aminotransferase class-V SWP_RS07560 PF01592 NifU-like N terminal domain SWP_RS07565 PF01521 Iron-sulphur cluster biosynthesis SWP_RS07570 PF07743 HSCB C-terminal oligomerisation domain SWP_RS07575 PF00012 Hsp70 protein SWP_RS07580 PF00111 2Fe-2S iron-sulfur cluster binding domain SWP_RS07585 PF04384 Iron-sulphur cluster assembly SWP_RS07590 PF00334 Nucleoside diphosphate kinase SWP_RS07595 PF00593 TonB dependent receptor SWP_RS07595 PF07715 TonB-dependent Receptor Plug Domain SWP_RS07605 PF01207 Dihydrouridine synthase (Dus) SWP_RS07615 PF05114 Protein of unknown function (DUF692) SWP_RS07625 PF04304 Protein of unknown function (DUF454) SWP_RS07630 PF00156 Phosphoribosyl transferase domain SWP_RS07635 PF12169 DNA polymerase III subunits gamma and tau domain III SWP_RS07635 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SWP_RS07635 PF12170 DNA polymerase III tau subunit V interacting with alpha SWP_RS07640 PF02575 YbaB/EbfC DNA-binding family SWP_RS07645 PF04055 Radical SAM superfamily SWP_RS07645 PF13186 Iron-sulfur cluster-binding domain SWP_RS07650 PF00072 Response regulator receiver domain SWP_RS07650 PF00196 Bacterial regulatory proteins, luxR family SWP_RS07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS07655 PF07730 Histidine kinase SWP_RS07660 PF00884 Sulfatase SWP_RS07665 PF07726 ATPase family associated with various cellular activities (AAA) SWP_RS07665 PF17863 AAA lid domain SWP_RS07685 PF13519 von Willebrand factor type A domain SWP_RS07685 PF07584 Aerotolerance regulator N-terminal SWP_RS07700 PF13662 Toprim domain SWP_RS07700 PF02132 RecR protein SWP_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS07705 PF00183 Hsp90 protein SWP_RS07715 PF05191 Adenylate kinase, active site lid SWP_RS07720 PF00762 Ferrochelatase SWP_RS07725 PF00294 pfkB family carbohydrate kinase SWP_RS07730 PF14602 Hexapeptide repeat of succinyl-transferase SWP_RS07730 PF12464 Maltose acetyltransferase SWP_RS07735 PF00375 Sodium:dicarboxylate symporter family SWP_RS07745 PF04996 Succinylarginine dihydrolase SWP_RS07750 PF01396 Topoisomerase DNA binding C4 zinc finger SWP_RS07750 PF08272 Topoisomerase I zinc-ribbon-like SWP_RS07750 PF01751 Toprim domain SWP_RS07750 PF01131 DNA topoisomerase SWP_RS07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS07760 PF03466 LysR substrate binding domain SWP_RS07765 PF03315 Serine dehydratase beta chain SWP_RS07765 PF03313 Serine dehydratase alpha chain SWP_RS07770 PF00933 Glycosyl hydrolase family 3 N terminal domain SWP_RS07775 PF02743 Cache domain SWP_RS07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS07775 PF00672 HAMP domain SWP_RS07780 PF05728 Uncharacterised protein family (UPF0227) SWP_RS07790 PF00708 Acylphosphatase SWP_RS07800 PF03461 TRCF domain SWP_RS07800 PF17757 UvrB interaction domain SWP_RS07800 PF00271 Helicase conserved C-terminal domain SWP_RS07800 PF00270 DEAD/DEAH box helicase SWP_RS07800 PF02559 CarD-like/TRCF domain SWP_RS07810 PF02687 FtsX-like permease family SWP_RS07810 PF12704 MacB-like periplasmic core domain SWP_RS07815 PF00005 ABC transporter SWP_RS07820 PF12704 MacB-like periplasmic core domain SWP_RS07820 PF02687 FtsX-like permease family SWP_RS07860 PF06185 YecM protein SWP_RS07870 PF00027 Cyclic nucleotide-binding domain SWP_RS07870 PF00520 Ion transport protein SWP_RS07875 PF01554 MatE SWP_RS07885 PF04266 ASCH domain SWP_RS07900 PF00873 AcrB/AcrD/AcrF family SWP_RS07920 PF07556 Protein of unknown function (DUF1538) SWP_RS07925 PF07556 Protein of unknown function (DUF1538) SWP_RS07975 PF00175 Oxidoreductase NAD-binding domain SWP_RS08000 PF00733 Asparagine synthase SWP_RS08000 PF13537 Glutamine amidotransferase domain SWP_RS08020 PF02652 L-lactate permease SWP_RS08025 PF07730 Histidine kinase SWP_RS08025 PF17200 Single Cache domain 2 SWP_RS08030 PF00072 Response regulator receiver domain SWP_RS08030 PF00196 Bacterial regulatory proteins, luxR family SWP_RS08045 PF00551 Formyl transferase SWP_RS08050 PF00586 AIR synthase related protein, N-terminal domain SWP_RS08050 PF02769 AIR synthase related protein, C-terminal domain SWP_RS08060 PF03553 Na+/H+ antiporter family SWP_RS08060 PF13726 Na+-H+ antiporter family SWP_RS08065 PF10417 C-terminal domain of 1-Cys peroxiredoxin SWP_RS08065 PF00578 AhpC/TSA family SWP_RS08075 PF00929 Exonuclease SWP_RS08080 PF00691 OmpA family SWP_RS08080 PF18393 MotY N-terminal domain SWP_RS08085 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SWP_RS08085 PF00326 Prolyl oligopeptidase family SWP_RS08090 PF03061 Thioesterase superfamily SWP_RS08095 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS08100 PF02472 Biopolymer transport protein ExbD/TolR SWP_RS08110 PF04052 TolB amino-terminal domain SWP_RS08110 PF07676 WD40-like Beta Propeller Repeat SWP_RS08115 PF00691 OmpA family SWP_RS08120 PF13174 Tetratricopeptide repeat SWP_RS08120 PF16331 TolA binding protein trimerisation SWP_RS08145 PF00462 Glutaredoxin SWP_RS08150 PF00271 Helicase conserved C-terminal domain SWP_RS08150 PF04851 Type III restriction enzyme, res subunit SWP_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS08155 PF03466 LysR substrate binding domain SWP_RS08160 PF05221 S-adenosyl-L-homocysteine hydrolase SWP_RS08160 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SWP_RS08165 PF13193 AMP-binding enzyme C-terminal domain SWP_RS08165 PF16177 Acetyl-coenzyme A synthetase N-terminus SWP_RS08165 PF00501 AMP-binding enzyme SWP_RS08170 PF00989 PAS fold SWP_RS08170 PF16736 Single Cache-like SWP_RS08170 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS08170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS08180 PF01266 FAD dependent oxidoreductase SWP_RS08185 PF00072 Response regulator receiver domain SWP_RS08185 PF00196 Bacterial regulatory proteins, luxR family SWP_RS08190 PF03061 Thioesterase superfamily SWP_RS08200 PF00793 DAHP synthetase I family SWP_RS08205 PF03618 Kinase/pyrophosphorylase SWP_RS08210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SWP_RS08210 PF00391 PEP-utilising enzyme, mobile domain SWP_RS08210 PF02896 PEP-utilising enzyme, TIM barrel domain SWP_RS08215 PF02913 FAD linked oxidases, C-terminal domain SWP_RS08215 PF01565 FAD binding domain SWP_RS08215 PF13183 4Fe-4S dicluster domain SWP_RS08240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SWP_RS08240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SWP_RS08255 PF08007 Cupin superfamily protein SWP_RS08260 PF00206 Lyase SWP_RS08260 PF08328 Adenylosuccinate lyase C-terminal SWP_RS08265 PF04356 Protein of unknown function (DUF489) SWP_RS08275 PF00293 NUDIX domain SWP_RS08280 PF00849 RNA pseudouridylate synthase SWP_RS08285 PF03971 Monomeric isocitrate dehydrogenase SWP_RS08290 PF00313 'Cold-shock' DNA-binding domain SWP_RS08295 PF02617 ATP-dependent Clp protease adaptor protein ClpS SWP_RS08300 PF17871 AAA lid domain SWP_RS08300 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS08300 PF07724 AAA domain (Cdc48 subfamily) SWP_RS08300 PF10431 C-terminal, D2-small domain, of ClpB protein SWP_RS08300 PF02861 Clp amino terminal domain, pathogenicity island component SWP_RS08305 PF01176 Translation initiation factor 1A / IF-1 SWP_RS08310 PF04376 Arginine-tRNA-protein transferase, N terminus SWP_RS08310 PF04377 Arginine-tRNA-protein transferase, C terminus SWP_RS08315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SWP_RS08320 PF05433 Glycine zipper 2TM domain SWP_RS08325 PF00155 Aminotransferase class I and II SWP_RS08325 PF00392 Bacterial regulatory proteins, gntR family SWP_RS08335 PF07676 WD40-like Beta Propeller Repeat SWP_RS08335 PF00326 Prolyl oligopeptidase family SWP_RS08340 PF01979 Amidohydrolase family SWP_RS08350 PF17773 UPF0176 acylphosphatase like domain SWP_RS08350 PF00581 Rhodanese-like domain SWP_RS08355 PF16200 C-terminal region of band_7 SWP_RS08355 PF01145 SPFH domain / Band 7 family SWP_RS08365 PF00012 Hsp70 protein SWP_RS08375 PF07963 Prokaryotic N-terminal methylation motif SWP_RS08375 PF00114 Pilin (bacterial filament) SWP_RS08380 PF00127 Copper binding proteins, plastocyanin/azurin family SWP_RS08385 PF03193 RsgA GTPase SWP_RS08395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS08395 PF00672 HAMP domain SWP_RS08405 PF00563 EAL domain SWP_RS08405 PF00498 FHA domain SWP_RS08405 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS08415 PF03372 Endonuclease/Exonuclease/phosphatase family SWP_RS08420 PF03795 YCII-related domain SWP_RS08425 PF04279 Intracellular septation protein A SWP_RS08470 PF01548 Transposase SWP_RS08470 PF02371 Transposase IS116/IS110/IS902 family SWP_RS08485 PF13495 Phage integrase, N-terminal SAM-like domain SWP_RS08485 PF00589 Phage integrase family SWP_RS08490 PF00290 Tryptophan synthase alpha chain SWP_RS08495 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS08500 PF00218 Indole-3-glycerol phosphate synthase SWP_RS08500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SWP_RS08505 PF02885 Glycosyl transferase family, helical bundle domain SWP_RS08505 PF00591 Glycosyl transferase family, a/b domain SWP_RS08510 PF00117 Glutamine amidotransferase class-I SWP_RS08515 PF00425 chorismate binding enzyme SWP_RS08515 PF04715 Anthranilate synthase component I, N terminal region SWP_RS08520 PF02811 PHP domain SWP_RS08525 PF01300 Telomere recombination SWP_RS08530 PF02616 Segregation and condensation protein ScpA SWP_RS08535 PF04079 Segregation and condensation complex subunit ScpB SWP_RS08540 PF01479 S4 domain SWP_RS08540 PF00849 RNA pseudouridylate synthase SWP_RS08545 PF00106 short chain dehydrogenase SWP_RS08550 PF12262 Bacterial virulence factor lipase N-terminal SWP_RS08555 PF08496 Peptidase family S49 N-terminal SWP_RS08555 PF01343 Peptidase family S49 SWP_RS08560 PF02311 AraC-like ligand binding domain SWP_RS08560 PF12833 Helix-turn-helix domain SWP_RS08580 PF13472 GDSL-like Lipase/Acylhydrolase family SWP_RS08585 PF00005 ABC transporter SWP_RS08595 PF01370 NAD dependent epimerase/dehydratase family SWP_RS08595 PF08338 Domain of unknown function (DUF1731) SWP_RS08600 PF01594 AI-2E family transporter SWP_RS08605 PF10672 S-adenosylmethionine-dependent methyltransferase SWP_RS08605 PF02926 THUMP domain SWP_RS08605 PF01170 Putative RNA methylase family UPF0020 SWP_RS08615 PF07085 DRTGG domain SWP_RS08615 PF01515 Phosphate acetyl/butaryl transferase SWP_RS08620 PF00871 Acetokinase family SWP_RS08625 PF04217 Protein of unknown function, DUF412 SWP_RS08630 PF04055 Radical SAM superfamily SWP_RS08635 PF02901 Pyruvate formate lyase-like SWP_RS08635 PF01228 Glycine radical SWP_RS08645 PF01226 Formate/nitrite transporter SWP_RS08650 PF03466 LysR substrate binding domain SWP_RS08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS08655 PF03606 C4-dicarboxylate anaerobic carrier SWP_RS08660 PF00593 TonB dependent receptor SWP_RS08660 PF07715 TonB-dependent Receptor Plug Domain SWP_RS08680 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS08690 PF00072 Response regulator receiver domain SWP_RS08690 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS08705 PF06470 SMC proteins Flexible Hinge Domain SWP_RS08705 PF02463 RecF/RecN/SMC N terminal domain SWP_RS08710 PF04354 ZipA, C-terminal FtsZ-binding domain SWP_RS08715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SWP_RS08715 PF00533 BRCA1 C Terminus (BRCT) domain SWP_RS08715 PF01653 NAD-dependent DNA ligase adenylation domain SWP_RS08715 PF12826 Helix-hairpin-helix motif SWP_RS08715 PF03120 NAD-dependent DNA ligase OB-fold domain SWP_RS08725 PF00072 Response regulator receiver domain SWP_RS08725 PF01966 HD domain SWP_RS08735 PF01323 DSBA-like thioredoxin domain SWP_RS08745 PF00474 Sodium:solute symporter family SWP_RS08750 PF01380 SIS domain SWP_RS08750 PF00571 CBS domain SWP_RS08760 PF00072 Response regulator receiver domain SWP_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS08760 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS08760 PF09308 LuxQ, periplasmic SWP_RS08775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SWP_RS08775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SWP_RS08780 PF00392 Bacterial regulatory proteins, gntR family SWP_RS08785 PF00171 Aldehyde dehydrogenase family SWP_RS08790 PF05544 Proline racemase SWP_RS08795 PF00701 Dihydrodipicolinate synthetase family SWP_RS08800 PF05544 Proline racemase SWP_RS08805 PF01266 FAD dependent oxidoreductase SWP_RS08810 PF05195 Aminopeptidase P, N-terminal domain SWP_RS08810 PF00557 Metallopeptidase family M24 SWP_RS08845 PF00672 HAMP domain SWP_RS08845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS08850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SWP_RS08850 PF01565 FAD binding domain SWP_RS08855 PF02237 Biotin protein ligase C terminal domain SWP_RS08855 PF03099 Biotin/lipoate A/B protein ligase family SWP_RS08855 PF08279 HTH domain SWP_RS08860 PF00485 Phosphoribulokinase / Uridine kinase family SWP_RS08880 PF00009 Elongation factor Tu GTP binding domain SWP_RS08880 PF03144 Elongation factor Tu domain 2 SWP_RS08880 PF03143 Elongation factor Tu C-terminal domain SWP_RS08885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SWP_RS08890 PF00467 KOW motif SWP_RS08890 PF02357 Transcription termination factor nusG SWP_RS08895 PF00298 Ribosomal protein L11, RNA binding domain SWP_RS08895 PF03946 Ribosomal protein L11, N-terminal domain SWP_RS08900 PF00687 Ribosomal protein L1p/L10e family SWP_RS08905 PF00466 Ribosomal protein L10 SWP_RS08910 PF00542 Ribosomal protein L7/L12 C-terminal domain SWP_RS08910 PF16320 Ribosomal protein L7/L12 dimerisation domain SWP_RS08915 PF04563 RNA polymerase beta subunit SWP_RS08915 PF04560 RNA polymerase Rpb2, domain 7 SWP_RS08915 PF10385 RNA polymerase beta subunit external 1 domain SWP_RS08915 PF04565 RNA polymerase Rpb2, domain 3 SWP_RS08915 PF04561 RNA polymerase Rpb2, domain 2 SWP_RS08915 PF00562 RNA polymerase Rpb2, domain 6 SWP_RS08920 PF04998 RNA polymerase Rpb1, domain 5 SWP_RS08920 PF05000 RNA polymerase Rpb1, domain 4 SWP_RS08920 PF04983 RNA polymerase Rpb1, domain 3 SWP_RS08920 PF00623 RNA polymerase Rpb1, domain 2 SWP_RS08920 PF04997 RNA polymerase Rpb1, domain 1 SWP_RS08925 PF00164 Ribosomal protein S12/S23 SWP_RS08930 PF00177 Ribosomal protein S7p/S5e SWP_RS08935 PF03144 Elongation factor Tu domain 2 SWP_RS08935 PF00009 Elongation factor Tu GTP binding domain SWP_RS08935 PF03764 Elongation factor G, domain IV SWP_RS08935 PF14492 Elongation Factor G, domain II SWP_RS08935 PF00679 Elongation factor G C-terminus SWP_RS08940 PF03144 Elongation factor Tu domain 2 SWP_RS08940 PF00009 Elongation factor Tu GTP binding domain SWP_RS08940 PF03143 Elongation factor Tu C-terminal domain SWP_RS08950 PF00297 Ribosomal protein L3 SWP_RS08955 PF00573 Ribosomal protein L4/L1 family SWP_RS08960 PF00276 Ribosomal protein L23 SWP_RS08965 PF03947 Ribosomal Proteins L2, C-terminal domain SWP_RS08965 PF00181 Ribosomal Proteins L2, RNA binding domain SWP_RS08970 PF00203 Ribosomal protein S19 SWP_RS08975 PF00237 Ribosomal protein L22p/L17e SWP_RS08980 PF00189 Ribosomal protein S3, C-terminal domain SWP_RS08980 PF07650 KH domain SWP_RS08985 PF00252 Ribosomal protein L16p/L10e SWP_RS08990 PF00831 Ribosomal L29 protein SWP_RS08995 PF00366 Ribosomal protein S17 SWP_RS09000 PF00238 Ribosomal protein L14p/L23e SWP_RS09005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SWP_RS09010 PF00281 Ribosomal protein L5 SWP_RS09010 PF00673 ribosomal L5P family C-terminus SWP_RS09015 PF00253 Ribosomal protein S14p/S29e SWP_RS09020 PF00410 Ribosomal protein S8 SWP_RS09025 PF00347 Ribosomal protein L6 SWP_RS09030 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SWP_RS09035 PF00333 Ribosomal protein S5, N-terminal domain SWP_RS09035 PF03719 Ribosomal protein S5, C-terminal domain SWP_RS09040 PF00327 Ribosomal protein L30p/L7e SWP_RS09045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SWP_RS09050 PF00344 SecY translocase SWP_RS09055 PF00416 Ribosomal protein S13/S18 SWP_RS09060 PF00411 Ribosomal protein S11 SWP_RS09065 PF00163 Ribosomal protein S4/S9 N-terminal domain SWP_RS09065 PF01479 S4 domain SWP_RS09070 PF01000 RNA polymerase Rpb3/RpoA insert domain SWP_RS09070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SWP_RS09070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SWP_RS09075 PF01196 Ribosomal protein L17 SWP_RS09080 PF03100 CcmE SWP_RS09085 PF04995 Heme exporter protein D (CcmD) SWP_RS09090 PF01578 Cytochrome C assembly protein SWP_RS09095 PF03379 CcmB protein SWP_RS09100 PF00005 ABC transporter SWP_RS09110 PF03918 Cytochrome C biogenesis protein SWP_RS09115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SWP_RS09115 PF01578 Cytochrome C assembly protein SWP_RS09120 PF08534 Redoxin SWP_RS09125 PF03918 Cytochrome C biogenesis protein SWP_RS09130 PF08534 Redoxin SWP_RS09150 PF00994 Probable molybdopterin binding domain SWP_RS09150 PF02464 Competence-damaged protein SWP_RS09160 PF00311 Phosphoenolpyruvate carboxylase SWP_RS09165 PF01546 Peptidase family M20/M25/M40 SWP_RS09165 PF07687 Peptidase dimerisation domain SWP_RS09170 PF02774 Semialdehyde dehydrogenase, dimerisation domain SWP_RS09170 PF01118 Semialdehyde dehydrogenase, NAD binding domain SWP_RS09175 PF00696 Amino acid kinase family SWP_RS09180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SWP_RS09180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SWP_RS09185 PF00764 Arginosuccinate synthase SWP_RS09190 PF00206 Lyase SWP_RS09190 PF14698 Argininosuccinate lyase C-terminal SWP_RS09195 PF17092 Penicillin-binding protein OB-like domain SWP_RS09195 PF00912 Transglycosylase SWP_RS09195 PF00905 Penicillin binding protein transpeptidase domain SWP_RS09200 PF11104 Type IV pilus assembly protein PilM; SWP_RS09210 PF04350 Pilus assembly protein, PilO SWP_RS09220 PF00263 Bacterial type II and III secretion system protein SWP_RS09220 PF11741 AMIN domain SWP_RS09220 PF07660 Secretin and TonB N terminus short domain SWP_RS09220 PF03958 Bacterial type II/III secretion system short domain SWP_RS09225 PF01202 Shikimate kinase SWP_RS09230 PF01761 3-dehydroquinate synthase SWP_RS09240 PF02086 D12 class N6 adenine-specific DNA methyltransferase SWP_RS09255 PF00834 Ribulose-phosphate 3 epimerase family SWP_RS09260 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS09265 PF00579 tRNA synthetases class I (W and Y) SWP_RS09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS09270 PF03466 LysR substrate binding domain SWP_RS09275 PF00892 EamA-like transporter family SWP_RS09280 PF04972 BON domain SWP_RS09285 PF13580 SIS domain SWP_RS09290 PF02021 Uncharacterised protein family UPF0102 SWP_RS09295 PF04348 LppC putative lipoprotein SWP_RS09300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SWP_RS09310 PF07715 TonB-dependent Receptor Plug Domain SWP_RS09320 PF03150 Di-haem cytochrome c peroxidase SWP_RS09330 PF01734 Patatin-like phospholipase SWP_RS09335 PF03466 LysR substrate binding domain SWP_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS09340 PF01258 Prokaryotic dksA/traR C4-type zinc finger SWP_RS09345 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS09345 PF00107 Zinc-binding dehydrogenase SWP_RS09350 PF00756 Putative esterase SWP_RS09355 PF12833 Helix-turn-helix domain SWP_RS09370 PF00005 ABC transporter SWP_RS09375 PF01497 Periplasmic binding protein SWP_RS09380 PF01032 FecCD transport family SWP_RS09405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SWP_RS09405 PF13378 Enolase C-terminal domain-like SWP_RS09415 PF03466 LysR substrate binding domain SWP_RS09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS09420 PF03553 Na+/H+ antiporter family SWP_RS09425 PF07715 TonB-dependent Receptor Plug Domain SWP_RS09425 PF00593 TonB dependent receptor SWP_RS09435 PF01979 Amidohydrolase family SWP_RS09440 PF09587 Bacterial capsule synthesis protein PGA_cap SWP_RS09445 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS09455 PF00893 Small Multidrug Resistance protein SWP_RS09465 PF13860 FlgD Ig-like domain SWP_RS09465 PF00082 Subtilase family SWP_RS09465 PF02225 PA domain SWP_RS09465 PF05922 Peptidase inhibitor I9 SWP_RS09475 PF07676 WD40-like Beta Propeller Repeat SWP_RS09475 PF04052 TolB amino-terminal domain SWP_RS09495 PF11842 Domain of unknown function (DUF3362) SWP_RS09495 PF04055 Radical SAM superfamily SWP_RS09495 PF08497 Radical SAM N-terminal SWP_RS09535 PF00672 HAMP domain SWP_RS09535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS09550 PF02613 Nitrate reductase delta subunit SWP_RS09555 PF13247 4Fe-4S dicluster domain SWP_RS09555 PF12800 4Fe-4S binding domain SWP_RS09560 PF01568 Molydopterin dinucleotide binding domain SWP_RS09560 PF00384 Molybdopterin oxidoreductase SWP_RS09560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS09570 PF13247 4Fe-4S dicluster domain SWP_RS09575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS09575 PF00384 Molybdopterin oxidoreductase SWP_RS09575 PF01568 Molydopterin dinucleotide binding domain SWP_RS09590 PF00326 Prolyl oligopeptidase family SWP_RS09600 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS09600 PF00072 Response regulator receiver domain SWP_RS09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS09600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS09600 PF01627 Hpt domain SWP_RS09600 PF00672 HAMP domain SWP_RS09670 PF00483 Nucleotidyl transferase SWP_RS09675 PF01740 STAS domain SWP_RS09680 PF00072 Response regulator receiver domain SWP_RS09680 PF00486 Transcriptional regulatory protein, C terminal SWP_RS09685 PF11756 Nitrous oxide-stimulated promoter SWP_RS09705 PF01636 Phosphotransferase enzyme family SWP_RS09710 PF01323 DSBA-like thioredoxin domain SWP_RS09720 PF06005 Cell division protein ZapB SWP_RS09725 PF03553 Na+/H+ antiporter family SWP_RS09740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS09740 PF00384 Molybdopterin oxidoreductase SWP_RS09740 PF10518 TAT (twin-arginine translocation) pathway signal sequence SWP_RS09740 PF01568 Molydopterin dinucleotide binding domain SWP_RS09745 PF13247 4Fe-4S dicluster domain SWP_RS09750 PF01022 Bacterial regulatory protein, arsR family SWP_RS09760 PF07804 HipA-like C-terminal domain SWP_RS09760 PF13657 HipA N-terminal domain SWP_RS09765 PF00665 Integrase core domain SWP_RS09770 PF01527 Transposase SWP_RS09790 PF02371 Transposase IS116/IS110/IS902 family SWP_RS09790 PF01548 Transposase SWP_RS09805 PF08340 Domain of unknown function (DUF1732) SWP_RS09805 PF03755 YicC-like family, N-terminal region SWP_RS09810 PF03725 3' exoribonuclease family, domain 2 SWP_RS09810 PF01138 3' exoribonuclease family, domain 1 SWP_RS09815 PF00156 Phosphoribosyl transferase domain SWP_RS09820 PF01227 GTP cyclohydrolase I SWP_RS09830 PF00440 Bacterial regulatory proteins, tetR family SWP_RS09835 PF00692 dUTPase SWP_RS09840 PF04127 DNA / pantothenate metabolism flavoprotein SWP_RS09840 PF02441 Flavoprotein SWP_RS09845 PF04002 RadC-like JAB domain SWP_RS09850 PF00830 Ribosomal L28 family SWP_RS09855 PF00471 Ribosomal protein L33 SWP_RS09860 PF00583 Acetyltransferase (GNAT) family SWP_RS09860 PF00696 Amino acid kinase family SWP_RS09870 PF00892 EamA-like transporter family SWP_RS09875 PF03061 Thioesterase superfamily SWP_RS09880 PF09382 RQC domain SWP_RS09880 PF16124 RecQ zinc-binding SWP_RS09880 PF00570 HRDC domain SWP_RS09880 PF00271 Helicase conserved C-terminal domain SWP_RS09880 PF00270 DEAD/DEAH box helicase SWP_RS09890 PF00682 HMGL-like SWP_RS09890 PF08502 LeuA allosteric (dimerisation) domain SWP_RS09895 PF00180 Isocitrate/isopropylmalate dehydrogenase SWP_RS09900 PF00330 Aconitase family (aconitate hydratase) SWP_RS09905 PF00694 Aconitase C-terminal domain SWP_RS09910 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SWP_RS09920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SWP_RS09920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SWP_RS09930 PF02381 MraZ protein, putative antitoxin-like SWP_RS09935 PF01795 MraW methylase family SWP_RS09940 PF04999 Cell division protein FtsL SWP_RS09945 PF00905 Penicillin binding protein transpeptidase domain SWP_RS09945 PF03717 Penicillin-binding Protein dimerisation domain SWP_RS09950 PF02875 Mur ligase family, glutamate ligase domain SWP_RS09950 PF01225 Mur ligase family, catalytic domain SWP_RS09950 PF08245 Mur ligase middle domain SWP_RS09955 PF08245 Mur ligase middle domain SWP_RS09955 PF02875 Mur ligase family, glutamate ligase domain SWP_RS09955 PF01225 Mur ligase family, catalytic domain SWP_RS09960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SWP_RS09960 PF00953 Glycosyl transferase family 4 SWP_RS09965 PF08245 Mur ligase middle domain SWP_RS09965 PF02875 Mur ligase family, glutamate ligase domain SWP_RS09970 PF01098 Cell cycle protein SWP_RS09975 PF03033 Glycosyltransferase family 28 N-terminal domain SWP_RS09975 PF04101 Glycosyltransferase family 28 C-terminal domain SWP_RS09980 PF02875 Mur ligase family, glutamate ligase domain SWP_RS09980 PF08245 Mur ligase middle domain SWP_RS09980 PF01225 Mur ligase family, catalytic domain SWP_RS09985 PF03799 Cell division protein FtsQ SWP_RS09985 PF08478 POTRA domain, FtsQ-type SWP_RS09990 PF02491 SHS2 domain inserted in FTSA SWP_RS09995 PF12327 FtsZ family, C-terminal domain SWP_RS09995 PF00091 Tubulin/FtsZ family, GTPase domain SWP_RS10000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SWP_RS10010 PF01551 Peptidase family M23 SWP_RS10015 PF02810 SEC-C motif SWP_RS10015 PF07516 SecA Wing and Scaffold domain SWP_RS10015 PF01043 SecA preprotein cross-linking domain SWP_RS10015 PF07517 SecA DEAD-like domain SWP_RS10035 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SWP_RS10045 PF01544 CorA-like Mg2+ transporter protein SWP_RS10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS10070 PF00486 Transcriptional regulatory protein, C terminal SWP_RS10070 PF00072 Response regulator receiver domain SWP_RS10080 PF00005 ABC transporter SWP_RS10085 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS10100 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS10100 PF00989 PAS fold SWP_RS10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS10105 PF00158 Sigma-54 interaction domain SWP_RS10105 PF02954 Bacterial regulatory protein, Fis family SWP_RS10105 PF00072 Response regulator receiver domain SWP_RS10110 PF01810 LysE type translocator SWP_RS10120 PF02540 NAD synthase SWP_RS10135 PF08448 PAS fold SWP_RS10135 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS10150 PF00884 Sulfatase SWP_RS10150 PF11893 Domain of unknown function (DUF3413) SWP_RS10155 PF07208 Protein of unknown function (DUF1414) SWP_RS10160 PF04245 37-kD nucleoid-associated bacterial protein SWP_RS10170 PF01551 Peptidase family M23 SWP_RS10170 PF01476 LysM domain SWP_RS10180 PF00753 Metallo-beta-lactamase superfamily SWP_RS10180 PF13567 Domain of unknown function (DUF4131) SWP_RS10180 PF03772 Competence protein SWP_RS10185 PF00005 ABC transporter SWP_RS10185 PF00664 ABC transporter transmembrane region SWP_RS10190 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SWP_RS10195 PF16123 Hydroxyacylglutathione hydrolase C-terminus SWP_RS10195 PF00753 Metallo-beta-lactamase superfamily SWP_RS10200 PF01432 Peptidase family M3 SWP_RS10210 PF00814 Glycoprotease family SWP_RS10230 PF12697 Alpha/beta hydrolase family SWP_RS10235 PF13193 AMP-binding enzyme C-terminal domain SWP_RS10235 PF00501 AMP-binding enzyme SWP_RS10240 PF01612 3'-5' exonuclease SWP_RS10240 PF00570 HRDC domain SWP_RS10245 PF03776 Septum formation topological specificity factor MinE SWP_RS10250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SWP_RS10255 PF03775 Septum formation inhibitor MinC, C-terminal domain SWP_RS10255 PF05209 Septum formation inhibitor MinC, N-terminal domain SWP_RS10260 PF05166 YcgL domain SWP_RS10265 PF13406 Transglycosylase SLT domain SWP_RS10270 PF03692 Putative zinc- or iron-chelating domain SWP_RS10275 PF01476 LysM domain SWP_RS10275 PF01464 Transglycosylase SLT domain SWP_RS10280 PF16123 Hydroxyacylglutathione hydrolase C-terminus SWP_RS10280 PF00753 Metallo-beta-lactamase superfamily SWP_RS10285 PF08241 Methyltransferase domain SWP_RS10290 PF03466 LysR substrate binding domain SWP_RS10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS10295 PF00075 RNase H SWP_RS10300 PF00929 Exonuclease SWP_RS10325 PF09278 MerR, DNA binding SWP_RS10325 PF00376 MerR family regulatory protein SWP_RS10335 PF00873 AcrB/AcrD/AcrF family SWP_RS10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS10345 PF09317 Domain of unknown function (DUF1974) SWP_RS10345 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS10350 PF13230 Glutamine amidotransferases class-II SWP_RS10355 PF00072 Response regulator receiver domain SWP_RS10360 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS10360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS10360 PF00672 HAMP domain SWP_RS10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS10360 PF01627 Hpt domain SWP_RS10360 PF00072 Response regulator receiver domain SWP_RS10370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SWP_RS10380 PF07690 Major Facilitator Superfamily SWP_RS10385 PF01327 Polypeptide deformylase SWP_RS10400 PF01336 OB-fold nucleic acid binding domain SWP_RS10400 PF02811 PHP domain SWP_RS10400 PF14579 Helix-hairpin-helix motif SWP_RS10400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SWP_RS10400 PF07733 Bacterial DNA polymerase III alpha NTPase domain SWP_RS10415 PF03006 Haemolysin-III related SWP_RS10425 PF13667 ThiC-associated domain SWP_RS10425 PF01964 Radical SAM ThiC family SWP_RS10430 PF02581 Thiamine monophosphate synthase SWP_RS10435 PF00899 ThiF family SWP_RS10445 PF05690 Thiazole biosynthesis protein ThiG SWP_RS10450 PF04055 Radical SAM superfamily SWP_RS10450 PF06968 Biotin and Thiamin Synthesis associated domain SWP_RS10460 PF00072 Response regulator receiver domain SWP_RS10460 PF00486 Transcriptional regulatory protein, C terminal SWP_RS10495 PF18030 RimK PreATP-grasp domain SWP_RS10495 PF08443 RimK-like ATP-grasp domain SWP_RS10500 PF08003 Protein of unknown function (DUF1698) SWP_RS10505 PF13649 Methyltransferase domain SWP_RS10510 PF00563 EAL domain SWP_RS10510 PF03707 Bacterial signalling protein N terminal repeat SWP_RS10510 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS10515 PF01336 OB-fold nucleic acid binding domain SWP_RS10515 PF00152 tRNA synthetases class II (D, K and N) SWP_RS10515 PF02938 GAD domain SWP_RS10520 PF01709 Transcriptional regulator SWP_RS10525 PF02075 Crossover junction endodeoxyribonuclease RuvC SWP_RS10530 PF07499 RuvA, C-terminal domain SWP_RS10530 PF01330 RuvA N terminal domain SWP_RS10535 PF17864 RuvB AAA lid domain SWP_RS10535 PF05491 RuvB C-terminal winged helix domain SWP_RS10535 PF05496 Holliday junction DNA helicase RuvB P-loop domain SWP_RS10565 PF07715 TonB-dependent Receptor Plug Domain SWP_RS10565 PF00593 TonB dependent receptor SWP_RS10570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS10575 PF00633 Helix-hairpin-helix motif SWP_RS10575 PF10576 Iron-sulfur binding domain of endonuclease III SWP_RS10575 PF00730 HhH-GPD superfamily base excision DNA repair protein SWP_RS10580 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS10585 PF04205 FMN-binding domain SWP_RS10590 PF03116 NQR2, RnfD, RnfE family SWP_RS10595 PF13375 RnfC Barrel sandwich hybrid domain SWP_RS10595 PF10531 SLBB domain SWP_RS10595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SWP_RS10595 PF13237 4Fe-4S dicluster domain SWP_RS10600 PF04060 Putative Fe-S cluster SWP_RS10605 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS10610 PF12792 CSS motif domain associated with EAL SWP_RS10610 PF00563 EAL domain SWP_RS10640 PF00271 Helicase conserved C-terminal domain SWP_RS10640 PF12344 Ultra-violet resistance protein B SWP_RS10640 PF17757 UvrB interaction domain SWP_RS10640 PF02151 UvrB/uvrC motif SWP_RS10640 PF04851 Type III restriction enzyme, res subunit SWP_RS10650 PF06508 Queuosine biosynthesis protein QueC SWP_RS10655 PF04055 Radical SAM superfamily SWP_RS10660 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS10690 PF03707 Bacterial signalling protein N terminal repeat SWP_RS10690 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS10690 PF00563 EAL domain SWP_RS10695 PF02810 SEC-C motif SWP_RS10705 PF01713 Smr domain SWP_RS10715 PF00440 Bacterial regulatory proteins, tetR family SWP_RS10720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS10720 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS10720 PF09317 Domain of unknown function (DUF1974) SWP_RS10720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS10725 PF00224 Pyruvate kinase, barrel domain SWP_RS10725 PF02887 Pyruvate kinase, alpha/beta domain SWP_RS10730 PF01380 SIS domain SWP_RS10730 PF01418 Helix-turn-helix domain, rpiR family SWP_RS10735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SWP_RS10735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SWP_RS10740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SWP_RS10745 PF00920 Dehydratase family SWP_RS10750 PF01081 KDPG and KHG aldolase SWP_RS10755 PF03974 Ecotin SWP_RS10760 PF01545 Cation efflux family SWP_RS10770 PF00884 Sulfatase SWP_RS10770 PF08019 Phosphoethanolamine transferase EptA/EptB SWP_RS10775 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS10780 PF13607 Succinyl-CoA ligase like flavodoxin domain SWP_RS10780 PF13380 CoA binding domain SWP_RS10780 PF00583 Acetyltransferase (GNAT) family SWP_RS10785 PF07726 ATPase family associated with various cellular activities (AAA) SWP_RS10785 PF17863 AAA lid domain SWP_RS10805 PF13519 von Willebrand factor type A domain SWP_RS10835 PF13186 Iron-sulfur cluster-binding domain SWP_RS10835 PF04055 Radical SAM superfamily SWP_RS10850 PF00072 Response regulator receiver domain SWP_RS10850 PF00196 Bacterial regulatory proteins, luxR family SWP_RS10855 PF07730 Histidine kinase SWP_RS10855 PF00672 HAMP domain SWP_RS10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS10860 PF00884 Sulfatase SWP_RS10865 PF03781 Sulfatase-modifying factor enzyme 1 SWP_RS10870 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SWP_RS10875 PF03466 LysR substrate binding domain SWP_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS10880 PF13533 Biotin-lipoyl like SWP_RS10885 PF00873 AcrB/AcrD/AcrF family SWP_RS10890 PF02321 Outer membrane efflux protein SWP_RS10895 PF13533 Biotin-lipoyl like SWP_RS10900 PF00873 AcrB/AcrD/AcrF family SWP_RS10910 PF00392 Bacterial regulatory proteins, gntR family SWP_RS10910 PF07729 FCD domain SWP_RS10920 PF00285 Citrate synthase, C-terminal domain SWP_RS10925 PF00330 Aconitase family (aconitate hydratase) SWP_RS10925 PF00694 Aconitase C-terminal domain SWP_RS10930 PF04303 PrpF protein SWP_RS10955 PF13533 Biotin-lipoyl like SWP_RS10975 PF18381 YcaO cyclodehydratase C-terminal domain SWP_RS10975 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SWP_RS10985 PF12848 ABC transporter SWP_RS10985 PF00005 ABC transporter SWP_RS10990 PF09905 DNA-binding protein VF530 SWP_RS10995 PF00884 Sulfatase SWP_RS11000 PF12833 Helix-turn-helix domain SWP_RS11010 PF10566 Glycoside hydrolase 97 SWP_RS11010 PF14508 Glycosyl-hydrolase 97 N-terminal SWP_RS11010 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation SWP_RS11015 PF03553 Na+/H+ antiporter family SWP_RS11020 PF01053 Cys/Met metabolism PLP-dependent enzyme SWP_RS11025 PF00288 GHMP kinases N terminal domain SWP_RS11025 PF10509 Galactokinase galactose-binding signature SWP_RS11025 PF08544 GHMP kinases C terminal SWP_RS11065 PF01554 MatE SWP_RS11070 PF00677 Lumazine binding domain SWP_RS11090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SWP_RS11090 PF03129 Anticodon binding domain SWP_RS11090 PF02824 TGS domain SWP_RS11090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SWP_RS11095 PF05198 Translation initiation factor IF-3, N-terminal domain SWP_RS11095 PF00707 Translation initiation factor IF-3, C-terminal domain SWP_RS11100 PF01632 Ribosomal protein L35 SWP_RS11105 PF00453 Ribosomal protein L20 SWP_RS11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS11115 PF00246 Zinc carboxypeptidase SWP_RS11115 PF18027 Cytosolic carboxypeptidase N-terminal domain SWP_RS11125 PF07023 Protein of unknown function (DUF1315) SWP_RS11130 PF00710 Asparaginase, N-terminal SWP_RS11130 PF17763 Glutaminase/Asparaginase C-terminal domain SWP_RS11135 PF01343 Peptidase family S49 SWP_RS11140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SWP_RS11140 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS11155 PF00111 2Fe-2S iron-sulfur cluster binding domain SWP_RS11160 PF00268 Ribonucleotide reductase, small chain SWP_RS11165 PF02867 Ribonucleotide reductase, barrel domain SWP_RS11165 PF03477 ATP cone domain SWP_RS11165 PF00317 Ribonucleotide reductase, all-alpha domain SWP_RS11170 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS11180 PF00521 DNA gyrase/topoisomerase IV, subunit A SWP_RS11180 PF03989 DNA gyrase C-terminal domain, beta-propeller SWP_RS11190 PF00266 Aminotransferase class-V SWP_RS11195 PF00155 Aminotransferase class I and II SWP_RS11200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SWP_RS11205 PF02224 Cytidylate kinase SWP_RS11210 PF00575 S1 RNA binding domain SWP_RS11215 PF00216 Bacterial DNA-binding protein SWP_RS11225 PF18073 Rubredoxin metal binding domain SWP_RS11230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SWP_RS11240 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SWP_RS11250 PF02913 FAD linked oxidases, C-terminal domain SWP_RS11250 PF01565 FAD binding domain SWP_RS11260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS11260 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS11260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS11260 PF12806 Acetyl-CoA dehydrogenase C-terminal like SWP_RS11265 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SWP_RS11275 PF13091 PLD-like domain SWP_RS11280 PF03942 DTW domain SWP_RS11290 PF01527 Transposase SWP_RS11295 PF00665 Integrase core domain SWP_RS11295 PF13333 Integrase core domain SWP_RS11295 PF13276 HTH-like domain SWP_RS11300 PF00072 Response regulator receiver domain SWP_RS11300 PF00196 Bacterial regulatory proteins, luxR family SWP_RS11305 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS11305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS11310 PF02424 ApbE family SWP_RS11325 PF00849 RNA pseudouridylate synthase SWP_RS11330 PF01433 Peptidase family M1 domain SWP_RS11330 PF11838 ERAP1-like C-terminal domain SWP_RS11335 PF00149 Calcineurin-like phosphoesterase SWP_RS11335 PF02872 5'-nucleotidase, C-terminal domain SWP_RS11380 PF00583 Acetyltransferase (GNAT) family SWP_RS11385 PF01266 FAD dependent oxidoreductase SWP_RS11400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SWP_RS11400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SWP_RS11430 PF04358 DsrC like protein SWP_RS11435 PF04077 DsrH like protein SWP_RS11440 PF02635 DsrE/DsrF-like family SWP_RS11445 PF02635 DsrE/DsrF-like family SWP_RS11450 PF01027 Inhibitor of apoptosis-promoting Bax1 SWP_RS11455 PF03466 LysR substrate binding domain SWP_RS11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS11460 PF07690 Major Facilitator Superfamily SWP_RS11470 PF00873 AcrB/AcrD/AcrF family SWP_RS11480 PF02810 SEC-C motif SWP_RS11480 PF07517 SecA DEAD-like domain SWP_RS11480 PF01043 SecA preprotein cross-linking domain SWP_RS11480 PF07516 SecA Wing and Scaffold domain SWP_RS11485 PF02833 DHHA2 domain SWP_RS11485 PF01368 DHH family SWP_RS11490 PF13654 AAA domain SWP_RS11490 PF05362 Lon protease (S16) C-terminal proteolytic domain SWP_RS11495 PF01136 Peptidase family U32 SWP_RS11495 PF16325 Peptidase family U32 C-terminal domain SWP_RS11520 PF13460 NAD(P)H-binding SWP_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS11525 PF03466 LysR substrate binding domain SWP_RS11540 PF05840 Bacteriophage replication gene A protein (GPA) SWP_RS11585 PF00115 Cytochrome C and Quinol oxidase polypeptide I SWP_RS11600 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SWP_RS11600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SWP_RS11610 PF00403 Heavy-metal-associated domain SWP_RS11625 PF00027 Cyclic nucleotide-binding domain SWP_RS11625 PF13545 Crp-like helix-turn-helix domain SWP_RS11630 PF00582 Universal stress protein family SWP_RS11635 PF01171 PP-loop family SWP_RS11645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SWP_RS11650 PF01933 Uncharacterised protein family UPF0052 SWP_RS11655 PF00155 Aminotransferase class I and II SWP_RS11660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SWP_RS11660 PF02403 Seryl-tRNA synthetase N-terminal domain SWP_RS11665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SWP_RS11670 PF12002 MgsA AAA+ ATPase C terminal SWP_RS11670 PF16193 AAA C-terminal domain SWP_RS11670 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS11675 PF03548 Outer membrane lipoprotein carrier protein LolA SWP_RS11680 PF01580 FtsK/SpoIIIE family SWP_RS11680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SWP_RS11680 PF17854 FtsK alpha domain SWP_RS11680 PF09397 Ftsk gamma domain SWP_RS11685 PF01037 Lrp/AsnC ligand binding domain SWP_RS11690 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SWP_RS11690 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SWP_RS11695 PF00486 Transcriptional regulatory protein, C terminal SWP_RS11695 PF00072 Response regulator receiver domain SWP_RS11705 PF00271 Helicase conserved C-terminal domain SWP_RS11705 PF00570 HRDC domain SWP_RS11705 PF16124 RecQ zinc-binding SWP_RS11705 PF09382 RQC domain SWP_RS11705 PF00270 DEAD/DEAH box helicase SWP_RS11710 PF03372 Endonuclease/Exonuclease/phosphatase family SWP_RS11715 PF13396 Phospholipase_D-nuclease N-terminal SWP_RS11715 PF13091 PLD-like domain SWP_RS11730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS11730 PF00672 HAMP domain SWP_RS11730 PF02743 Cache domain SWP_RS11735 PF02445 Quinolinate synthetase A protein SWP_RS11740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SWP_RS11740 PF00364 Biotin-requiring enzyme SWP_RS11740 PF02817 e3 binding domain SWP_RS11745 PF02779 Transketolase, pyrimidine binding domain SWP_RS11745 PF02780 Transketolase, C-terminal domain SWP_RS11750 PF00676 Dehydrogenase E1 component SWP_RS11750 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal SWP_RS11755 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SWP_RS11760 PF01625 Peptide methionine sulfoxide reductase SWP_RS11765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SWP_RS11765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SWP_RS11765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SWP_RS11765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SWP_RS11770 PF17206 SeqA protein N-terminal domain SWP_RS11770 PF03925 SeqA protein C-terminal domain SWP_RS11775 PF12697 Alpha/beta hydrolase family SWP_RS11785 PF01402 Ribbon-helix-helix protein, copG family SWP_RS11790 PF00258 Flavodoxin SWP_RS11800 PF08207 Elongation factor P (EF-P) KOW-like domain SWP_RS11800 PF09285 Elongation factor P, C-terminal SWP_RS11800 PF01132 Elongation factor P (EF-P) OB domain SWP_RS11805 PF00155 Aminotransferase class I and II SWP_RS11815 PF13286 Phosphohydrolase-associated domain SWP_RS11815 PF01966 HD domain SWP_RS11820 PF01914 MarC family integral membrane protein SWP_RS11825 PF00465 Iron-containing alcohol dehydrogenase SWP_RS11825 PF00171 Aldehyde dehydrogenase family SWP_RS11830 PF01274 Malate synthase SWP_RS11835 PF03466 LysR substrate binding domain SWP_RS11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS11850 PF03992 Antibiotic biosynthesis monooxygenase SWP_RS11855 PF07676 WD40-like Beta Propeller Repeat SWP_RS11855 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SWP_RS11855 PF00326 Prolyl oligopeptidase family SWP_RS11865 PF00425 chorismate binding enzyme SWP_RS11865 PF04715 Anthranilate synthase component I, N terminal region SWP_RS11870 PF00293 NUDIX domain SWP_RS11880 PF01336 OB-fold nucleic acid binding domain SWP_RS11880 PF00152 tRNA synthetases class II (D, K and N) SWP_RS11885 PF10518 TAT (twin-arginine translocation) pathway signal sequence SWP_RS11885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SWP_RS11885 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SWP_RS11890 PF00374 Nickel-dependent hydrogenase SWP_RS11895 PF01292 Prokaryotic cytochrome b561 SWP_RS11900 PF01750 Hydrogenase maturation protease SWP_RS11910 PF01300 Telomere recombination SWP_RS11910 PF17788 HypF Kae1-like domain SWP_RS11910 PF00708 Acylphosphatase SWP_RS11910 PF07503 HypF finger SWP_RS11915 PF02492 CobW/HypB/UreG, nucleotide-binding domain SWP_RS11920 PF01455 HupF/HypC family SWP_RS11925 PF01924 Hydrogenase formation hypA family SWP_RS11930 PF02769 AIR synthase related protein, C-terminal domain SWP_RS11930 PF00586 AIR synthase related protein, N-terminal domain SWP_RS11935 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SWP_RS11955 PF00437 Type II/IV secretion system protein SWP_RS11970 PF04972 BON domain SWP_RS11970 PF00263 Bacterial type II and III secretion system protein SWP_RS11970 PF13629 Pilus formation protein N terminal region SWP_RS12000 PF03734 L,D-transpeptidase catalytic domain SWP_RS12000 PF01471 Putative peptidoglycan binding domain SWP_RS12020 PF01894 Uncharacterised protein family UPF0047 SWP_RS12025 PF01189 16S rRNA methyltransferase RsmB/F SWP_RS12025 PF01029 NusB family SWP_RS12030 PF07690 Major Facilitator Superfamily SWP_RS12035 PF00128 Alpha amylase, catalytic domain SWP_RS12045 PF09087 Cyclomaltodextrinase, N-terminal SWP_RS12045 PF10438 Cyclo-malto-dextrinase C-terminal domain SWP_RS12045 PF00128 Alpha amylase, catalytic domain SWP_RS12050 PF00128 Alpha amylase, catalytic domain SWP_RS12050 PF16657 Maltogenic Amylase, C-terminal domain SWP_RS12050 PF02903 Alpha amylase, N-terminal ig-like domain SWP_RS12055 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation SWP_RS12055 PF14508 Glycosyl-hydrolase 97 N-terminal SWP_RS12055 PF10566 Glycoside hydrolase 97 SWP_RS12060 PF01274 Malate synthase SWP_RS12080 PF09137 Glucodextranase, domain N SWP_RS12080 PF00723 Glycosyl hydrolases family 15 SWP_RS12095 PF01272 Transcription elongation factor, GreA/GreB, C-term SWP_RS12095 PF03449 Transcription elongation factor, N-terminal SWP_RS12105 PF08007 Cupin superfamily protein SWP_RS12110 PF01336 OB-fold nucleic acid binding domain SWP_RS12110 PF02811 PHP domain SWP_RS12110 PF00929 Exonuclease SWP_RS12110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SWP_RS12110 PF07733 Bacterial DNA polymerase III alpha NTPase domain SWP_RS12110 PF11490 DNA polymerase III polC-type N-terminus II SWP_RS12110 PF14579 Helix-hairpin-helix motif SWP_RS12115 PF01545 Cation efflux family SWP_RS12120 PF00356 Bacterial regulatory proteins, lacI family SWP_RS12130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS12130 PF00672 HAMP domain SWP_RS12130 PF17200 Single Cache domain 2 SWP_RS12140 PF00381 PTS HPr component phosphorylation site SWP_RS12145 PF02896 PEP-utilising enzyme, TIM barrel domain SWP_RS12145 PF05524 PEP-utilising enzyme, N-terminal SWP_RS12145 PF00391 PEP-utilising enzyme, mobile domain SWP_RS12150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SWP_RS12155 PF03960 ArsC family SWP_RS12160 PF01546 Peptidase family M20/M25/M40 SWP_RS12160 PF07687 Peptidase dimerisation domain SWP_RS12165 PF02557 D-alanyl-D-alanine carboxypeptidase SWP_RS12170 PF12697 Alpha/beta hydrolase family SWP_RS12175 PF00484 Carbonic anhydrase SWP_RS12180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SWP_RS12185 PF00465 Iron-containing alcohol dehydrogenase SWP_RS12190 PF02348 Cytidylyltransferase SWP_RS12210 PF14220 Domain of unknown function (DUF4329) SWP_RS12210 PF05593 RHS Repeat SWP_RS12210 PF03527 RHS protein SWP_RS12225 PF02899 Phage integrase, N-terminal SAM-like domain SWP_RS12225 PF00589 Phage integrase family SWP_RS12235 PF01695 IstB-like ATP binding protein SWP_RS12240 PF00665 Integrase core domain SWP_RS12275 PF01527 Transposase SWP_RS12280 PF00665 Integrase core domain SWP_RS12280 PF13333 Integrase core domain SWP_RS12280 PF13276 HTH-like domain SWP_RS12310 PF00873 AcrB/AcrD/AcrF family SWP_RS12315 PF13533 Biotin-lipoyl like SWP_RS12320 PF06804 NlpB/DapX lipoprotein SWP_RS12325 PF00701 Dihydrodipicolinate synthetase family SWP_RS12330 PF01842 ACT domain SWP_RS12335 PF00578 AhpC/TSA family SWP_RS12340 PF01810 LysE type translocator SWP_RS12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS12345 PF03466 LysR substrate binding domain SWP_RS12350 PF01594 AI-2E family transporter SWP_RS12355 PF01206 Sulfurtransferase TusA SWP_RS12360 PF01435 Peptidase family M48 SWP_RS12365 PF03960 ArsC family SWP_RS12380 PF00308 Bacterial dnaA protein SWP_RS12390 PF00860 Permease family SWP_RS12395 PF00462 Glutaredoxin SWP_RS12400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SWP_RS12400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SWP_RS12415 PF03737 Aldolase/RraA SWP_RS12425 PF01794 Ferric reductase like transmembrane component SWP_RS12430 PF00174 Oxidoreductase molybdopterin binding domain SWP_RS12435 PF02646 RmuC family SWP_RS12440 PF14718 Soluble lytic murein transglycosylase L domain SWP_RS12440 PF01464 Transglycosylase SLT domain SWP_RS12450 PF07726 ATPase family associated with various cellular activities (AAA) SWP_RS12450 PF17863 AAA lid domain SWP_RS12460 PF01841 Transglutaminase-like superfamily SWP_RS12460 PF11992 Domain of unknown function (DUF3488) SWP_RS12460 PF13559 Domain of unknown function (DUF4129) SWP_RS12465 PF17946 RecC C-terminal domain SWP_RS12470 PF13361 UvrD-like helicase C-terminal domain SWP_RS12470 PF00580 UvrD/REP helicase N-terminal domain SWP_RS12470 PF12705 PD-(D/E)XK nuclease superfamily SWP_RS12475 PF13538 UvrD-like helicase C-terminal domain SWP_RS12480 PF07478 D-ala D-ala ligase C-terminus SWP_RS12480 PF01820 D-ala D-ala ligase N-terminus SWP_RS12485 PF03264 NapC/NirT cytochrome c family, N-terminal region SWP_RS12490 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SWP_RS12495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS12495 PF01568 Molydopterin dinucleotide binding domain SWP_RS12495 PF00384 Molybdopterin oxidoreductase SWP_RS12505 PF11898 Domain of unknown function (DUF3418) SWP_RS12505 PF04408 Helicase associated domain (HA2) SWP_RS12505 PF00271 Helicase conserved C-terminal domain SWP_RS12505 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SWP_RS12505 PF00270 DEAD/DEAH box helicase SWP_RS12525 PF01112 Asparaginase SWP_RS12530 PF01103 Surface antigen SWP_RS12530 PF17243 POTRA domain TamA domain 1 SWP_RS12535 PF04357 TamB, inner membrane protein subunit of TAM complex SWP_RS12540 PF07840 FadR C-terminal domain SWP_RS12540 PF00392 Bacterial regulatory proteins, gntR family SWP_RS12545 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SWP_RS12550 PF02600 Disulfide bond formation protein DsbB SWP_RS12555 PF08298 PrkA AAA domain SWP_RS12555 PF06798 PrkA serine protein kinase C-terminal domain SWP_RS12560 PF04285 Protein of unknown function (DUF444) SWP_RS12565 PF04293 SpoVR like protein SWP_RS12570 PF01386 Ribosomal L25p family SWP_RS12575 PF05951 Bacterial protein of unknown function (DUF882) SWP_RS12580 PF03734 L,D-transpeptidase catalytic domain SWP_RS12580 PF01471 Putative peptidoglycan binding domain SWP_RS12585 PF07963 Prokaryotic N-terminal methylation motif SWP_RS12605 PF01066 CDP-alcohol phosphatidyltransferase SWP_RS12610 PF01541 GIY-YIG catalytic domain SWP_RS12610 PF08459 UvrC Helix-hairpin-helix N-terminal SWP_RS12610 PF02151 UvrB/uvrC motif SWP_RS12625 PF13654 AAA domain SWP_RS12625 PF05362 Lon protease (S16) C-terminal proteolytic domain SWP_RS12630 PF07977 FabA-like domain SWP_RS12635 PF04957 Ribosome modulation factor SWP_RS12645 PF12848 ABC transporter SWP_RS12645 PF00005 ABC transporter SWP_RS12645 PF16326 ABC transporter C-terminal domain SWP_RS12655 PF10672 S-adenosylmethionine-dependent methyltransferase SWP_RS12655 PF02926 THUMP domain SWP_RS12655 PF01170 Putative RNA methylase family UPF0020 SWP_RS12660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SWP_RS12665 PF07126 Cell-division protein ZapC SWP_RS12670 PF01180 Dihydroorotate dehydrogenase SWP_RS12675 PF05088 Bacterial NAD-glutamate dehydrogenase SWP_RS12690 PF07044 Protein of unknown function (DUF1329) SWP_RS12700 PF01433 Peptidase family M1 domain SWP_RS12700 PF11940 Domain of unknown function (DUF3458) Ig-like fold SWP_RS12700 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SWP_RS12705 PF00595 PDZ domain SWP_RS12705 PF11818 C-terminal domain of tail specific protease (DUF3340) SWP_RS12705 PF03572 Peptidase family S41 SWP_RS12705 PF17804 Tail specific protease N-terminal domain SWP_RS12710 PF17516 ProQ C-terminal domain SWP_RS12710 PF04352 ProQ/FINO family SWP_RS12715 PF13185 GAF domain SWP_RS12720 PF07130 YebG protein SWP_RS12725 PF04403 Paraquat-inducible protein A SWP_RS12730 PF04403 Paraquat-inducible protein A SWP_RS12735 PF02470 MlaD protein SWP_RS12740 PF07670 Nucleoside recognition SWP_RS12745 PF01189 16S rRNA methyltransferase RsmB/F SWP_RS12745 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SWP_RS12745 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SWP_RS12750 PF01026 TatD related DNase SWP_RS12760 PF09115 DNA polymerase III, delta subunit, C terminal SWP_RS12765 PF02223 Thymidylate kinase SWP_RS12770 PF02618 YceG-like family SWP_RS12775 PF01063 Amino-transferase class IV SWP_RS12780 PF00485 Phosphoribulokinase / Uridine kinase family SWP_RS12785 PF10609 NUBPL iron-transfer P-loop NTPase SWP_RS12790 PF01588 Putative tRNA binding domain SWP_RS12790 PF09334 tRNA synthetases class I (M) SWP_RS12795 PF01784 NIF3 (NGG1p interacting factor 3) SWP_RS12805 PF07690 Major Facilitator Superfamily SWP_RS12810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SWP_RS12810 PF00205 Thiamine pyrophosphate enzyme, central domain SWP_RS12810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SWP_RS12815 PF10369 Small subunit of acetolactate synthase SWP_RS12820 PF00011 Hsp20/alpha crystallin family SWP_RS12825 PF02872 5'-nucleotidase, C-terminal domain SWP_RS12825 PF00149 Calcineurin-like phosphoesterase SWP_RS12830 PF02230 Phospholipase/Carboxylesterase SWP_RS12835 PF13409 Glutathione S-transferase, N-terminal domain SWP_RS12845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS12855 PF13406 Transglycosylase SLT domain SWP_RS12870 PF01584 CheW-like domain SWP_RS12870 PF00072 Response regulator receiver domain SWP_RS12875 PF00924 Mechanosensitive ion channel SWP_RS12890 PF12697 Alpha/beta hydrolase family SWP_RS12910 PF03150 Di-haem cytochrome c peroxidase SWP_RS12910 PF00034 Cytochrome c SWP_RS12925 PF03466 LysR substrate binding domain SWP_RS12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS12935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS12940 PF01810 LysE type translocator SWP_RS12965 PF00175 Oxidoreductase NAD-binding domain SWP_RS12965 PF00111 2Fe-2S iron-sulfur cluster binding domain SWP_RS12965 PF00970 Oxidoreductase FAD-binding domain SWP_RS12970 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS12975 PF02508 Rnf-Nqr subunit, membrane protein SWP_RS12980 PF04205 FMN-binding domain SWP_RS12985 PF03116 NQR2, RnfD, RnfE family SWP_RS12990 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SWP_RS12990 PF11973 NQRA C-terminal domain SWP_RS13000 PF00005 ABC transporter SWP_RS13000 PF12704 MacB-like periplasmic core domain SWP_RS13000 PF02687 FtsX-like permease family SWP_RS13020 PF12704 MacB-like periplasmic core domain SWP_RS13020 PF02687 FtsX-like permease family SWP_RS13020 PF00005 ABC transporter SWP_RS13040 PF00881 Nitroreductase family SWP_RS13070 PF07715 TonB-dependent Receptor Plug Domain SWP_RS13070 PF00593 TonB dependent receptor SWP_RS13090 PF01230 HIT domain SWP_RS13095 PF00196 Bacterial regulatory proteins, luxR family SWP_RS13105 PF03793 PASTA domain SWP_RS13105 PF00069 Protein kinase domain SWP_RS13110 PF07690 Major Facilitator Superfamily SWP_RS13120 PF04324 BFD-like [2Fe-2S] binding domain SWP_RS13120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SWP_RS13120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SWP_RS13120 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS13120 PF13806 Rieske-like [2Fe-2S] domain SWP_RS13120 PF18267 Rubredoxin NAD+ reductase C-terminal domain SWP_RS13135 PF02885 Glycosyl transferase family, helical bundle domain SWP_RS13135 PF00591 Glycosyl transferase family, a/b domain SWP_RS13140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SWP_RS13140 PF14824 Sirohaem biosynthesis protein central SWP_RS13140 PF10414 Sirohaem synthase dimerisation region SWP_RS13145 PF00384 Molybdopterin oxidoreductase SWP_RS13145 PF01568 Molydopterin dinucleotide binding domain SWP_RS13145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS13150 PF14537 Cytochrome c3 SWP_RS13155 PF01435 Peptidase family M48 SWP_RS13165 PF08241 Methyltransferase domain SWP_RS13170 PF00155 Aminotransferase class I and II SWP_RS13175 PF06968 Biotin and Thiamin Synthesis associated domain SWP_RS13175 PF04055 Radical SAM superfamily SWP_RS13180 PF00202 Aminotransferase class-III SWP_RS13195 PF03144 Elongation factor Tu domain 2 SWP_RS13195 PF00679 Elongation factor G C-terminus SWP_RS13195 PF00009 Elongation factor Tu GTP binding domain SWP_RS13195 PF03764 Elongation factor G, domain IV SWP_RS13195 PF14492 Elongation Factor G, domain II SWP_RS13210 PF02146 Sir2 family SWP_RS13215 PF01475 Ferric uptake regulator family SWP_RS13225 PF01645 Conserved region in glutamate synthase SWP_RS13240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS13240 PF02743 Cache domain SWP_RS13240 PF00672 HAMP domain SWP_RS13245 PF00549 CoA-ligase SWP_RS13245 PF02629 CoA binding domain SWP_RS13250 PF08442 ATP-grasp domain SWP_RS13250 PF00549 CoA-ligase SWP_RS13255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SWP_RS13255 PF02817 e3 binding domain SWP_RS13255 PF00364 Biotin-requiring enzyme SWP_RS13260 PF16078 2-oxoglutarate dehydrogenase N-terminus SWP_RS13260 PF00676 Dehydrogenase E1 component SWP_RS13260 PF02779 Transketolase, pyrimidine binding domain SWP_RS13260 PF16870 2-oxoglutarate dehydrogenase C-terminal SWP_RS13265 PF13085 2Fe-2S iron-sulfur cluster binding domain SWP_RS13275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SWP_RS13280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SWP_RS13285 PF00285 Citrate synthase, C-terminal domain SWP_RS13290 PF00285 Citrate synthase, C-terminal domain SWP_RS13300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS13305 PF04055 Radical SAM superfamily SWP_RS13305 PF01938 TRAM domain SWP_RS13305 PF00919 Uncharacterized protein family UPF0004 SWP_RS13310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS13315 PF00873 AcrB/AcrD/AcrF family SWP_RS13320 PF00873 AcrB/AcrD/AcrF family SWP_RS13350 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS13355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS13355 PF00672 HAMP domain SWP_RS13355 PF02743 Cache domain SWP_RS13365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS13365 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS13365 PF12806 Acetyl-CoA dehydrogenase C-terminal like SWP_RS13365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS13370 PF01263 Aldose 1-epimerase SWP_RS13380 PF13617 YnbE-like lipoprotein SWP_RS13385 PF07027 Protein of unknown function (DUF1318) SWP_RS13390 PF01594 AI-2E family transporter SWP_RS13410 PF18500 CadC C-terminal domain 1 SWP_RS13410 PF00486 Transcriptional regulatory protein, C terminal SWP_RS13425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS13430 PF00873 AcrB/AcrD/AcrF family SWP_RS13450 PF04851 Type III restriction enzyme, res subunit SWP_RS13450 PF13307 Helicase C-terminal domain SWP_RS13455 PF08029 HisG, C-terminal domain SWP_RS13455 PF01634 ATP phosphoribosyltransferase SWP_RS13460 PF00815 Histidinol dehydrogenase SWP_RS13465 PF00155 Aminotransferase class I and II SWP_RS13470 PF08645 Polynucleotide kinase 3 phosphatase SWP_RS13470 PF00475 Imidazoleglycerol-phosphate dehydratase SWP_RS13475 PF00117 Glutamine amidotransferase class-I SWP_RS13480 PF00977 Histidine biosynthesis protein SWP_RS13485 PF00977 Histidine biosynthesis protein SWP_RS13490 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SWP_RS13490 PF01502 Phosphoribosyl-AMP cyclohydrolase SWP_RS13500 PF01259 SAICAR synthetase SWP_RS13505 PF03279 Bacterial lipid A biosynthesis acyltransferase SWP_RS13510 PF00216 Bacterial DNA-binding protein SWP_RS13515 PF03147 Ferredoxin-fold anticodon binding domain SWP_RS13515 PF01588 Putative tRNA binding domain SWP_RS13515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SWP_RS13515 PF03483 B3/4 domain SWP_RS13515 PF03484 tRNA synthetase B5 domain SWP_RS13520 PF01409 tRNA synthetases class II core domain (F) SWP_RS13520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SWP_RS13525 PF00672 HAMP domain SWP_RS13525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS13535 PF08443 RimK-like ATP-grasp domain SWP_RS13535 PF18030 RimK PreATP-grasp domain SWP_RS13555 PF01243 Pyridoxamine 5'-phosphate oxidase SWP_RS13555 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SWP_RS13560 PF00491 Arginase family SWP_RS13570 PF17810 Arginine decarboxylase helical bundle domain SWP_RS13570 PF17944 Arginine decarboxylase C-terminal helical extension SWP_RS13570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SWP_RS13580 PF04337 Protein of unknown function, DUF480 SWP_RS13590 PF00005 ABC transporter SWP_RS13595 PF00313 'Cold-shock' DNA-binding domain SWP_RS13600 PF13847 Methyltransferase domain SWP_RS13610 PF08411 Exonuclease C-terminal SWP_RS13610 PF00929 Exonuclease SWP_RS13615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SWP_RS13615 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SWP_RS13620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SWP_RS13620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SWP_RS13635 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS13635 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS13640 PF00550 Phosphopantetheine attachment site SWP_RS13650 PF00698 Acyl transferase domain SWP_RS13655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SWP_RS13655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SWP_RS13660 PF02504 Fatty acid synthesis protein SWP_RS13665 PF01783 Ribosomal L32p protein family SWP_RS13670 PF02620 Large ribosomal RNA subunit accumulation protein YceD SWP_RS13680 PF02545 Maf-like protein SWP_RS13685 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS13690 PF00849 RNA pseudouridylate synthase SWP_RS13690 PF01479 S4 domain SWP_RS13695 PF00575 S1 RNA binding domain SWP_RS13695 PF12111 Polyribonucleotide phosphorylase C terminal SWP_RS13695 PF10150 Ribonuclease E/G family SWP_RS13700 PF01740 STAS domain SWP_RS13700 PF00916 Sulfate permease family SWP_RS13705 PF01625 Peptide methionine sulfoxide reductase SWP_RS13715 PF01926 50S ribosome-binding GTPase SWP_RS13755 PF07715 TonB-dependent Receptor Plug Domain SWP_RS13755 PF00593 TonB dependent receptor SWP_RS13760 PF00072 Response regulator receiver domain SWP_RS13760 PF00486 Transcriptional regulatory protein, C terminal SWP_RS13770 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS13785 PF03544 Gram-negative bacterial TonB protein C-terminal SWP_RS13795 PF00873 AcrB/AcrD/AcrF family SWP_RS13805 PF14743 DNA ligase OB-like domain SWP_RS13805 PF01068 ATP dependent DNA ligase domain SWP_RS13810 PF01219 Prokaryotic diacylglycerol kinase SWP_RS13825 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS13840 PF00691 OmpA family SWP_RS13840 PF01389 OmpA-like transmembrane domain SWP_RS13845 PF00486 Transcriptional regulatory protein, C terminal SWP_RS13845 PF00072 Response regulator receiver domain SWP_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS13850 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS13850 PF00672 HAMP domain SWP_RS13850 PF13756 Stimulus-sensing domain SWP_RS13850 PF13755 Sensor N-terminal transmembrane domain SWP_RS13855 PF01053 Cys/Met metabolism PLP-dependent enzyme SWP_RS13860 PF00753 Metallo-beta-lactamase superfamily SWP_RS13875 PF00589 Phage integrase family SWP_RS13875 PF02899 Phage integrase, N-terminal SAM-like domain SWP_RS13880 PF00561 alpha/beta hydrolase fold SWP_RS13895 PF00873 AcrB/AcrD/AcrF family SWP_RS13915 PF01751 Toprim domain SWP_RS13915 PF01131 DNA topoisomerase SWP_RS13925 PF00156 Phosphoribosyl transferase domain SWP_RS13930 PF02674 Colicin V production protein SWP_RS13935 PF05036 Sporulation related domain SWP_RS13940 PF08245 Mur ligase middle domain SWP_RS13940 PF02875 Mur ligase family, glutamate ligase domain SWP_RS13945 PF01416 tRNA pseudouridine synthase SWP_RS13955 PF01118 Semialdehyde dehydrogenase, NAD binding domain SWP_RS13955 PF02774 Semialdehyde dehydrogenase, dimerisation domain SWP_RS13960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS13960 PF11890 Domain of unknown function (DUF3410) SWP_RS13960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SWP_RS13970 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS13970 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS13975 PF01266 FAD dependent oxidoreductase SWP_RS14005 PF01264 Chorismate synthase SWP_RS14010 PF05175 Methyltransferase small domain SWP_RS14015 PF01713 Smr domain SWP_RS14020 PF00300 Histidine phosphatase superfamily (branch 1) SWP_RS14025 PF05193 Peptidase M16 inactive domain SWP_RS14025 PF16187 Middle or third domain of peptidase_M16 SWP_RS14025 PF00675 Insulinase (Peptidase family M16) SWP_RS14030 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS14030 PF00563 EAL domain SWP_RS14030 PF03707 Bacterial signalling protein N terminal repeat SWP_RS14045 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS14045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SWP_RS14045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SWP_RS14050 PF00108 Thiolase, N-terminal domain SWP_RS14050 PF02803 Thiolase, C-terminal domain SWP_RS14055 PF17863 AAA lid domain SWP_RS14055 PF07726 ATPase family associated with various cellular activities (AAA) SWP_RS14060 PF01882 Protein of unknown function DUF58 SWP_RS14075 PF13519 von Willebrand factor type A domain SWP_RS14085 PF04542 Sigma-70 region 2 SWP_RS14085 PF08281 Sigma-70, region 4 SWP_RS14095 PF00474 Sodium:solute symporter family SWP_RS14100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SWP_RS14115 PF00873 AcrB/AcrD/AcrF family SWP_RS14125 PF00581 Rhodanese-like domain SWP_RS14130 PF05922 Peptidase inhibitor I9 SWP_RS14130 PF00082 Subtilase family SWP_RS14135 PF09905 DNA-binding protein VF530 SWP_RS14145 PF00925 GTP cyclohydrolase II SWP_RS14150 PF10928 Protein of unknown function (DUF2810) SWP_RS14160 PF13597 Anaerobic ribonucleoside-triphosphate reductase SWP_RS14160 PF03477 ATP cone domain SWP_RS14170 PF01047 MarR family SWP_RS14175 PF00107 Zinc-binding dehydrogenase SWP_RS14175 PF16884 N-terminal domain of oxidoreductase SWP_RS14180 PF01734 Patatin-like phospholipase SWP_RS14185 PF00271 Helicase conserved C-terminal domain SWP_RS14185 PF00270 DEAD/DEAH box helicase SWP_RS14200 PF01863 Protein of unknown function DUF45 SWP_RS14210 PF08525 Opacity-associated protein A N-terminal motif SWP_RS14210 PF01551 Peptidase family M23 SWP_RS14210 PF01476 LysM domain SWP_RS14215 PF13476 AAA domain SWP_RS14220 PF00149 Calcineurin-like phosphoesterase SWP_RS14220 PF12320 Type 5 capsule protein repressor C-terminal domain SWP_RS14230 PF00072 Response regulator receiver domain SWP_RS14230 PF00486 Transcriptional regulatory protein, C terminal SWP_RS14235 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS14235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS14235 PF00672 HAMP domain SWP_RS14245 PF00155 Aminotransferase class I and II SWP_RS14250 PF00593 TonB dependent receptor SWP_RS14250 PF07715 TonB-dependent Receptor Plug Domain SWP_RS14270 PF00873 AcrB/AcrD/AcrF family SWP_RS14295 PF01925 Sulfite exporter TauE/SafE SWP_RS14300 PF03466 LysR substrate binding domain SWP_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS14320 PF13302 Acetyltransferase (GNAT) domain SWP_RS14325 PF05698 Bacterial trigger factor protein (TF) C-terminus SWP_RS14345 PF03544 Gram-negative bacterial TonB protein C-terminal SWP_RS14350 PF02472 Biopolymer transport protein ExbD/TolR SWP_RS14355 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS14360 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS14370 PF00267 Gram-negative porin SWP_RS14375 PF00136 DNA polymerase family B SWP_RS14375 PF03104 DNA polymerase family B, exonuclease domain SWP_RS14380 PF06733 DEAD_2 SWP_RS14380 PF13307 Helicase C-terminal domain SWP_RS14385 PF01925 Sulfite exporter TauE/SafE SWP_RS14395 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SWP_RS14400 PF00850 Histone deacetylase domain SWP_RS14515 PF00939 Sodium:sulfate symporter transmembrane region SWP_RS14520 PF01053 Cys/Met metabolism PLP-dependent enzyme SWP_RS14525 PF05128 Domain of unknown function (DUF697) SWP_RS14530 PF04317 YcjX-like family, DUF463 SWP_RS14535 PF04024 PspC domain SWP_RS14545 PF04012 PspA/IM30 family SWP_RS14550 PF02954 Bacterial regulatory protein, Fis family SWP_RS14550 PF00158 Sigma-54 interaction domain SWP_RS14555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SWP_RS14560 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS14565 PF12911 N-terminal TM domain of oligopeptide transport permease C SWP_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS14570 PF00005 ABC transporter SWP_RS14570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SWP_RS14575 PF00005 ABC transporter SWP_RS14580 PF12241 Trans-2-enoyl-CoA reductase catalytic region SWP_RS14580 PF07055 Enoyl reductase FAD binding domain SWP_RS14580 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase SWP_RS14585 PF13145 PPIC-type PPIASE domain SWP_RS14590 PF00216 Bacterial DNA-binding protein SWP_RS14595 PF05362 Lon protease (S16) C-terminal proteolytic domain SWP_RS14595 PF02190 ATP-dependent protease La (LON) substrate-binding domain SWP_RS14595 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS14600 PF06689 ClpX C4-type zinc finger SWP_RS14600 PF10431 C-terminal, D2-small domain, of ClpB protein SWP_RS14600 PF07724 AAA domain (Cdc48 subfamily) SWP_RS14605 PF00574 Clp protease SWP_RS14610 PF05698 Bacterial trigger factor protein (TF) C-terminus SWP_RS14610 PF05697 Bacterial trigger factor protein (TF) SWP_RS14610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS14630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SWP_RS14630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SWP_RS14635 PF01406 tRNA synthetases class I (C) catalytic domain SWP_RS14635 PF09190 DALR domain SWP_RS14640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SWP_RS14645 PF00149 Calcineurin-like phosphoesterase SWP_RS14650 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) SWP_RS14660 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SWP_RS14660 PF00749 tRNA synthetases class I (E and Q), catalytic domain SWP_RS14665 PF07670 Nucleoside recognition SWP_RS14665 PF02421 Ferrous iron transport protein B SWP_RS14665 PF07664 Ferrous iron transport protein B C terminus SWP_RS14675 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SWP_RS14680 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB SWP_RS14710 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SWP_RS14715 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB SWP_RS14720 PF00593 TonB dependent receptor SWP_RS14720 PF07715 TonB-dependent Receptor Plug Domain SWP_RS14730 PF03167 Uracil DNA glycosylase superfamily SWP_RS14740 PF00593 TonB dependent receptor SWP_RS14740 PF07715 TonB-dependent Receptor Plug Domain SWP_RS14755 PF05651 Putative sugar diacid recognition SWP_RS14755 PF13556 PucR C-terminal helix-turn-helix domain SWP_RS14755 PF17853 GGDEF-like domain SWP_RS14760 PF07963 Prokaryotic N-terminal methylation motif SWP_RS14765 PF02447 GntP family permease SWP_RS14770 PF02595 Glycerate kinase family SWP_RS14775 PF00282 Pyridoxal-dependent decarboxylase conserved domain SWP_RS14780 PF13649 Methyltransferase domain SWP_RS14795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SWP_RS14800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SWP_RS14800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SWP_RS14800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SWP_RS14800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SWP_RS14805 PF00849 RNA pseudouridylate synthase SWP_RS14805 PF01479 S4 domain SWP_RS14815 PF00593 TonB dependent receptor SWP_RS14815 PF07715 TonB-dependent Receptor Plug Domain SWP_RS14835 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS14845 PF12392 Collagenase SWP_RS14845 PF01136 Peptidase family U32 SWP_RS14855 PF02868 Thermolysin metallopeptidase, alpha-helical domain SWP_RS14855 PF04151 Bacterial pre-peptidase C-terminal domain SWP_RS14855 PF01447 Thermolysin metallopeptidase, catalytic domain SWP_RS14855 PF03413 Peptidase propeptide and YPEB domain SWP_RS14855 PF07504 Fungalysin/Thermolysin Propeptide Motif SWP_RS14870 PF00571 CBS domain SWP_RS14880 PF02028 BCCT, betaine/carnitine/choline family transporter SWP_RS14890 PF17954 Quercetinase C-terminal cupin domain SWP_RS14890 PF02678 Pirin SWP_RS14895 PF03466 LysR substrate binding domain SWP_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS14900 PF00857 Isochorismatase family SWP_RS14915 PF02743 Cache domain SWP_RS14915 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS14920 PF00158 Sigma-54 interaction domain SWP_RS14920 PF02954 Bacterial regulatory protein, Fis family SWP_RS14920 PF00072 Response regulator receiver domain SWP_RS14925 PF12704 MacB-like periplasmic core domain SWP_RS14925 PF00005 ABC transporter SWP_RS14925 PF02687 FtsX-like permease family SWP_RS14930 PF02687 FtsX-like permease family SWP_RS14930 PF00005 ABC transporter SWP_RS14930 PF12704 MacB-like periplasmic core domain SWP_RS14945 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SWP_RS14950 PF00501 AMP-binding enzyme SWP_RS14955 PF00561 alpha/beta hydrolase fold SWP_RS14960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SWP_RS14960 PF00108 Thiolase, N-terminal domain SWP_RS14980 PF01844 HNH endonuclease SWP_RS14985 PF02028 BCCT, betaine/carnitine/choline family transporter SWP_RS14990 PF01895 PhoU domain SWP_RS14995 PF00005 ABC transporter SWP_RS15000 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS15030 PF08453 Peptidase family M9 N-terminal SWP_RS15030 PF01752 Collagenase SWP_RS15035 PF01810 LysE type translocator SWP_RS15045 PF00075 RNase H SWP_RS15055 PF02789 Cytosol aminopeptidase family, N-terminal domain SWP_RS15055 PF00883 Cytosol aminopeptidase family, catalytic domain SWP_RS15135 PF12848 ABC transporter SWP_RS15135 PF00005 ABC transporter SWP_RS15140 PF00403 Heavy-metal-associated domain SWP_RS15145 PF13411 MerR HTH family regulatory protein SWP_RS15150 PF00326 Prolyl oligopeptidase family SWP_RS15165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SWP_RS15165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SWP_RS15170 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS15175 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS15180 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS15180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS15180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS15185 PF00171 Aldehyde dehydrogenase family SWP_RS15190 PF00108 Thiolase, N-terminal domain SWP_RS15190 PF02803 Thiolase, C-terminal domain SWP_RS15200 PF04204 Homoserine O-succinyltransferase SWP_RS15205 PF09619 Type III secretion system lipoprotein chaperone (YscW) SWP_RS15215 PF03922 OmpW family SWP_RS15235 PF00106 short chain dehydrogenase SWP_RS15240 PF01040 UbiA prenyltransferase family SWP_RS15245 PF02335 Cytochrome c552 SWP_RS15260 PF02525 Flavodoxin-like fold SWP_RS15265 PF02254 TrkA-N domain SWP_RS15265 PF00999 Sodium/hydrogen exchanger family SWP_RS15270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SWP_RS15275 PF18494 Pullulanase Ins domain SWP_RS15275 PF17967 Pullulanase N2 domain SWP_RS15275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SWP_RS15275 PF03714 Bacterial pullanase-associated domain SWP_RS15275 PF11852 Domain of unknown function (DUF3372) SWP_RS15320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS15320 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS15320 PF09317 Domain of unknown function (DUF1974) SWP_RS15320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS15340 PF00583 Acetyltransferase (GNAT) family SWP_RS15355 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SWP_RS15355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SWP_RS15370 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SWP_RS15375 PF13193 AMP-binding enzyme C-terminal domain SWP_RS15375 PF00501 AMP-binding enzyme SWP_RS15375 PF16177 Acetyl-coenzyme A synthetase N-terminus SWP_RS15380 PF09278 MerR, DNA binding SWP_RS15380 PF00376 MerR family regulatory protein SWP_RS15385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS15385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS15385 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS15390 PF01039 Carboxyl transferase domain SWP_RS15395 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS15400 PF00364 Biotin-requiring enzyme SWP_RS15400 PF00289 Biotin carboxylase, N-terminal domain SWP_RS15400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SWP_RS15400 PF18140 Propionyl-coenzyme A carboxylase BT domain SWP_RS15400 PF02785 Biotin carboxylase C-terminal domain SWP_RS15405 PF00682 HMGL-like SWP_RS15410 PF01144 Coenzyme A transferase SWP_RS15415 PF01144 Coenzyme A transferase SWP_RS15420 PF00873 AcrB/AcrD/AcrF family SWP_RS15425 PF08534 Redoxin SWP_RS15445 PF12800 4Fe-4S binding domain SWP_RS15445 PF13247 4Fe-4S dicluster domain SWP_RS15450 PF00384 Molybdopterin oxidoreductase SWP_RS15450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS15450 PF01568 Molydopterin dinucleotide binding domain SWP_RS15455 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB SWP_RS15460 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SWP_RS15465 PF00873 AcrB/AcrD/AcrF family SWP_RS15470 PF13533 Biotin-lipoyl like SWP_RS15480 PF00265 Thymidine kinase SWP_RS15485 PF01432 Peptidase family M3 SWP_RS15490 PF03553 Na+/H+ antiporter family SWP_RS15495 PF00766 Electron transfer flavoprotein FAD-binding domain SWP_RS15495 PF01012 Electron transfer flavoprotein domain SWP_RS15500 PF01012 Electron transfer flavoprotein domain SWP_RS15510 PF01979 Amidohydrolase family SWP_RS15515 PF01979 Amidohydrolase family SWP_RS15515 PF13382 Adenine deaminase C-terminal domain SWP_RS15525 PF01980 tRNA-methyltransferase O SWP_RS15525 PF18389 TrmO C-terminal domain SWP_RS15530 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS15545 PF05656 Protein of unknown function (DUF805) SWP_RS15550 PF04073 Aminoacyl-tRNA editing domain SWP_RS15550 PF03129 Anticodon binding domain SWP_RS15550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SWP_RS15555 PF14535 AMP-binding enzyme C-terminal domain SWP_RS15555 PF00501 AMP-binding enzyme SWP_RS15560 PF00005 ABC transporter SWP_RS15575 PF02653 Branched-chain amino acid transport system / permease component SWP_RS15580 PF00501 AMP-binding enzyme SWP_RS15585 PF12399 Branched-chain amino acid ATP-binding cassette transporter SWP_RS15585 PF00005 ABC transporter SWP_RS15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS15595 PF13493 Domain of unknown function (DUF4118) SWP_RS15595 PF00582 Universal stress protein family SWP_RS15595 PF02702 Osmosensitive K+ channel His kinase sensor domain SWP_RS15595 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS15600 PF00072 Response regulator receiver domain SWP_RS15600 PF00196 Bacterial regulatory proteins, luxR family SWP_RS15615 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS15615 PF00107 Zinc-binding dehydrogenase SWP_RS15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS15620 PF03466 LysR substrate binding domain SWP_RS15630 PF07681 DoxX SWP_RS15640 PF02254 TrkA-N domain SWP_RS15640 PF02080 TrkA-C domain SWP_RS15640 PF00999 Sodium/hydrogen exchanger family SWP_RS15645 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS15645 PF08448 PAS fold SWP_RS15650 PF09179 TilS substrate binding domain SWP_RS15650 PF01171 PP-loop family SWP_RS15650 PF11734 TilS substrate C-terminal domain SWP_RS15655 PF14579 Helix-hairpin-helix motif SWP_RS15655 PF07733 Bacterial DNA polymerase III alpha NTPase domain SWP_RS15655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SWP_RS15655 PF02811 PHP domain SWP_RS15655 PF01336 OB-fold nucleic acid binding domain SWP_RS15660 PF01351 Ribonuclease HII SWP_RS15665 PF02684 Lipid-A-disaccharide synthetase SWP_RS15670 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS15670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SWP_RS15675 PF07977 FabA-like domain SWP_RS15680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SWP_RS15680 PF14602 Hexapeptide repeat of succinyl-transferase SWP_RS15680 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS15685 PF03938 Outer membrane protein (OmpH-like) SWP_RS15690 PF01103 Surface antigen SWP_RS15690 PF07244 Surface antigen variable number repeat SWP_RS15695 PF02163 Peptidase family M50 SWP_RS15695 PF17820 PDZ domain SWP_RS15700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SWP_RS15700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SWP_RS15700 PF13288 DXP reductoisomerase C-terminal domain SWP_RS15710 PF01255 Putative undecaprenyl diphosphate synthase SWP_RS15715 PF01765 Ribosome recycling factor SWP_RS15720 PF00696 Amino acid kinase family SWP_RS15725 PF00889 Elongation factor TS SWP_RS15730 PF00318 Ribosomal protein S2 SWP_RS15735 PF00557 Metallopeptidase family M24 SWP_RS15740 PF01842 ACT domain SWP_RS15740 PF01966 HD domain SWP_RS15740 PF08335 GlnD PII-uridylyltransferase SWP_RS15740 PF01909 Nucleotidyltransferase domain SWP_RS15745 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS15745 PF14602 Hexapeptide repeat of succinyl-transferase SWP_RS15745 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SWP_RS15755 PF00551 Formyl transferase SWP_RS15755 PF01842 ACT domain SWP_RS15760 PF00258 Flavodoxin SWP_RS15765 PF00849 RNA pseudouridylate synthase SWP_RS15770 PF04287 tRNA pseudouridine synthase C SWP_RS15825 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) SWP_RS15830 PF07348 Syd protein (SUKH-2) SWP_RS15835 PF14489 QueF-like protein SWP_RS15835 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SWP_RS15840 PF03466 LysR substrate binding domain SWP_RS15840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS15845 PF14863 Alkyl sulfatase dimerisation SWP_RS15845 PF00753 Metallo-beta-lactamase superfamily SWP_RS15845 PF14864 Alkyl sulfatase C-terminal SWP_RS15850 PF01648 4'-phosphopantetheinyl transferase superfamily SWP_RS15855 PF00593 TonB dependent receptor SWP_RS15855 PF07715 TonB-dependent Receptor Plug Domain SWP_RS15865 PF16197 Ketoacyl-synthetase C-terminal extension SWP_RS15865 PF08659 KR domain SWP_RS15865 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS15865 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS15865 PF14765 Polyketide synthase dehydratase SWP_RS15865 PF00698 Acyl transferase domain SWP_RS15865 PF00550 Phosphopantetheine attachment site SWP_RS15875 PF02801 Beta-ketoacyl synthase, C-terminal domain SWP_RS15875 PF08659 KR domain SWP_RS15875 PF00109 Beta-ketoacyl synthase, N-terminal domain SWP_RS15875 PF00698 Acyl transferase domain SWP_RS15875 PF16197 Ketoacyl-synthetase C-terminal extension SWP_RS15875 PF14765 Polyketide synthase dehydratase SWP_RS15875 PF00550 Phosphopantetheine attachment site SWP_RS15880 PF00698 Acyl transferase domain SWP_RS15880 PF03060 Nitronate monooxygenase SWP_RS15885 PF13302 Acetyltransferase (GNAT) domain SWP_RS15895 PF17158 Membrane-associated sensor, integral membrane domain SWP_RS15895 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS15920 PF02371 Transposase IS116/IS110/IS902 family SWP_RS15920 PF01548 Transposase SWP_RS15925 PF00271 Helicase conserved C-terminal domain SWP_RS15925 PF00270 DEAD/DEAH box helicase SWP_RS15935 PF01546 Peptidase family M20/M25/M40 SWP_RS15935 PF07687 Peptidase dimerisation domain SWP_RS15940 PF07715 TonB-dependent Receptor Plug Domain SWP_RS15940 PF00593 TonB dependent receptor SWP_RS15960 PF00486 Transcriptional regulatory protein, C terminal SWP_RS15960 PF00072 Response regulator receiver domain SWP_RS15965 PF08918 PhoQ Sensor SWP_RS15965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS15970 PF11737 Protein of unknown function (DUF3300) SWP_RS15995 PF03707 Bacterial signalling protein N terminal repeat SWP_RS15995 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS15995 PF00563 EAL domain SWP_RS16010 PF03649 Uncharacterised protein family (UPF0014) SWP_RS16015 PF01546 Peptidase family M20/M25/M40 SWP_RS16015 PF07687 Peptidase dimerisation domain SWP_RS16025 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SWP_RS16040 PF04542 Sigma-70 region 2 SWP_RS16040 PF08281 Sigma-70, region 4 SWP_RS16045 PF03616 Sodium/glutamate symporter SWP_RS16060 PF01253 Translation initiation factor SUI1 SWP_RS16065 PF02622 Uncharacterized ACR, COG1678 SWP_RS16070 PF03652 Holliday junction resolvase SWP_RS16080 PF00326 Prolyl oligopeptidase family SWP_RS16080 PF07676 WD40-like Beta Propeller Repeat SWP_RS16085 PF18324 Hypothetical protein TT1725 SWP_RS16085 PF00180 Isocitrate/isopropylmalate dehydrogenase SWP_RS16095 PF04241 Protein of unknown function (DUF423) SWP_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS16105 PF03466 LysR substrate binding domain SWP_RS16115 PF02568 Thiamine biosynthesis protein (ThiI) SWP_RS16115 PF02926 THUMP domain SWP_RS16120 PF13677 Membrane MotB of proton-channel complex MotA/MotB SWP_RS16120 PF00691 OmpA family SWP_RS16125 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS16135 PF02609 Exonuclease VII small subunit SWP_RS16140 PF00348 Polyprenyl synthetase SWP_RS16145 PF02780 Transketolase, C-terminal domain SWP_RS16145 PF02779 Transketolase, pyrimidine binding domain SWP_RS16145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SWP_RS16180 PF01025 GrpE SWP_RS16185 PF01513 ATP-NAD kinase SWP_RS16195 PF02913 FAD linked oxidases, C-terminal domain SWP_RS16195 PF01565 FAD binding domain SWP_RS16200 PF02754 Cysteine-rich domain SWP_RS16205 PF11870 Domain of unknown function (DUF3390) SWP_RS16205 PF02589 LUD domain SWP_RS16205 PF13183 4Fe-4S dicluster domain SWP_RS16220 PF07683 Cobalamin synthesis protein cobW C-terminal domain SWP_RS16220 PF02492 CobW/HypB/UreG, nucleotide-binding domain SWP_RS16245 PF08281 Sigma-70, region 4 SWP_RS16245 PF04542 Sigma-70 region 2 SWP_RS16255 PF00155 Aminotransferase class I and II SWP_RS16265 PF00271 Helicase conserved C-terminal domain SWP_RS16265 PF00270 DEAD/DEAH box helicase SWP_RS16270 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS16270 PF03707 Bacterial signalling protein N terminal repeat SWP_RS16270 PF00563 EAL domain SWP_RS16285 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS16285 PF00563 EAL domain SWP_RS16285 PF03707 Bacterial signalling protein N terminal repeat SWP_RS16295 PF01136 Peptidase family U32 SWP_RS16295 PF16325 Peptidase family U32 C-terminal domain SWP_RS16315 PF00037 4Fe-4S binding domain SWP_RS16330 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS16335 PF11892 Domain of unknown function (DUF3412) SWP_RS16335 PF03641 Possible lysine decarboxylase SWP_RS16335 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SWP_RS16340 PF01367 5'-3' exonuclease, C-terminal SAM fold SWP_RS16340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SWP_RS16350 PF00762 Ferrochelatase SWP_RS16355 PF00437 Type II/IV secretion system protein SWP_RS16360 PF00437 Type II/IV secretion system protein SWP_RS16365 PF01168 Alanine racemase, N-terminal domain SWP_RS16370 PF14748 Pyrroline-5-carboxylate reductase dimerisation SWP_RS16370 PF03807 NADP oxidoreductase coenzyme F420-dependent SWP_RS16375 PF02325 YGGT family SWP_RS16380 PF02594 Uncharacterised ACR, YggU family COG1872 SWP_RS16390 PF01725 Ham1 family SWP_RS16395 PF04055 Radical SAM superfamily SWP_RS16395 PF06969 HemN C-terminal domain SWP_RS16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS16405 PF03466 LysR substrate binding domain SWP_RS16415 PF04960 Glutaminase SWP_RS16420 PF04320 Protein with unknown function (DUF469) SWP_RS16425 PF02390 Putative methyltransferase SWP_RS16430 PF00633 Helix-hairpin-helix motif SWP_RS16430 PF14815 NUDIX domain SWP_RS16430 PF00730 HhH-GPD superfamily base excision DNA repair protein SWP_RS16435 PF04362 Bacterial Fe(2+) trafficking SWP_RS16440 PF04264 YceI-like domain SWP_RS16445 PF01292 Prokaryotic cytochrome b561 SWP_RS16480 PF00144 Beta-lactamase SWP_RS16500 PF07690 Major Facilitator Superfamily SWP_RS16510 PF01979 Amidohydrolase family SWP_RS16515 PF01869 BadF/BadG/BcrA/BcrD ATPase family SWP_RS16520 PF02838 Glycosyl hydrolase family 20, domain 2 SWP_RS16520 PF03173 Putative carbohydrate binding domain SWP_RS16520 PF00728 Glycosyl hydrolase family 20, catalytic domain SWP_RS16545 PF04820 Tryptophan halogenase SWP_RS16550 PF04820 Tryptophan halogenase SWP_RS16560 PF00356 Bacterial regulatory proteins, lacI family SWP_RS16565 PF00543 Nitrogen regulatory protein P-II SWP_RS16575 PF07963 Prokaryotic N-terminal methylation motif SWP_RS16575 PF14245 Type IV pilin PilA SWP_RS16585 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor SWP_RS16585 PF07963 Prokaryotic N-terminal methylation motif SWP_RS16610 PF02401 LytB protein SWP_RS16615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS16620 PF01252 Signal peptidase (SPase) II SWP_RS16625 PF08264 Anticodon-binding domain of tRNA SWP_RS16625 PF00133 tRNA synthetases class I (I, L, M and V) SWP_RS16625 PF06827 Zinc finger found in FPG and IleRS SWP_RS16630 PF01687 Riboflavin kinase SWP_RS16630 PF06574 FAD synthetase SWP_RS16635 PF03023 Lipid II flippase MurJ SWP_RS16640 PF01649 Ribosomal protein S20 SWP_RS16645 PF01022 Bacterial regulatory protein, arsR family SWP_RS16650 PF02225 PA domain SWP_RS16650 PF04389 Peptidase family M28 SWP_RS16655 PF03883 Peroxide stress protein YaaA SWP_RS16660 PF01235 Sodium:alanine symporter family SWP_RS16665 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SWP_RS16665 PF09363 XFP C-terminal domain SWP_RS16665 PF09364 XFP N-terminal domain SWP_RS16670 PF05736 OprF membrane domain SWP_RS16670 PF00691 OmpA family SWP_RS16675 PF00923 Transaldolase/Fructose-6-phosphate aldolase SWP_RS16680 PF00342 Phosphoglucose isomerase SWP_RS16695 PF01261 Xylose isomerase-like TIM barrel SWP_RS16705 PF14821 Threonine synthase N terminus SWP_RS16705 PF00291 Pyridoxal-phosphate dependent enzyme SWP_RS16710 PF08544 GHMP kinases C terminal SWP_RS16710 PF00288 GHMP kinases N terminal domain SWP_RS16715 PF01842 ACT domain SWP_RS16715 PF03447 Homoserine dehydrogenase, NAD binding domain SWP_RS16715 PF13840 ACT domain SWP_RS16715 PF00742 Homoserine dehydrogenase SWP_RS16715 PF00696 Amino acid kinase family SWP_RS16720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS16730 PF01371 Trp repressor protein SWP_RS16735 PF01322 Cytochrome C' SWP_RS16745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SWP_RS16750 PF01817 Chorismate mutase type II SWP_RS16750 PF00800 Prephenate dehydratase SWP_RS16755 PF00999 Sodium/hydrogen exchanger family SWP_RS16765 PF00175 Oxidoreductase NAD-binding domain SWP_RS16765 PF00111 2Fe-2S iron-sulfur cluster binding domain SWP_RS16765 PF00970 Oxidoreductase FAD-binding domain SWP_RS16770 PF03063 Prismane/CO dehydrogenase family SWP_RS16775 PF02153 Prephenate dehydrogenase SWP_RS16775 PF01817 Chorismate mutase type II SWP_RS16780 PF00793 DAHP synthetase I family SWP_RS16785 PF01245 Ribosomal protein L19 SWP_RS16790 PF01746 tRNA (Guanine-1)-methyltransferase SWP_RS16795 PF01782 RimM N-terminal domain SWP_RS16795 PF05239 PRC-barrel domain SWP_RS16800 PF00886 Ribosomal protein S16 SWP_RS16810 PF01578 Cytochrome C assembly protein SWP_RS16815 PF03471 Transporter associated domain SWP_RS16815 PF00571 CBS domain SWP_RS16815 PF01595 Cyclin M transmembrane N-terminal domain SWP_RS16830 PF01648 4'-phosphopantetheinyl transferase superfamily SWP_RS16835 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SWP_RS16840 PF02565 Recombination protein O C terminal SWP_RS16840 PF11967 Recombination protein O N terminal SWP_RS16845 PF01926 50S ribosome-binding GTPase SWP_RS16845 PF07650 KH domain SWP_RS16850 PF14622 Ribonuclease-III-like SWP_RS16850 PF00035 Double-stranded RNA binding motif SWP_RS16855 PF10502 Signal peptidase, peptidase S26 SWP_RS16860 PF06421 GTP-binding protein LepA C-terminus SWP_RS16860 PF03144 Elongation factor Tu domain 2 SWP_RS16860 PF00679 Elongation factor G C-terminus SWP_RS16860 PF00009 Elongation factor Tu GTP binding domain SWP_RS16870 PF03888 MucB/RseB N-terminal domain SWP_RS16870 PF17188 MucB/RseB C-terminal domain SWP_RS16875 PF03872 Anti sigma-E protein RseA, N-terminal domain SWP_RS16875 PF03873 Anti sigma-E protein RseA, C-terminal domain SWP_RS16880 PF08281 Sigma-70, region 4 SWP_RS16880 PF04542 Sigma-70 region 2 SWP_RS16885 PF02910 Fumarate reductase flavoprotein C-term SWP_RS16885 PF00890 FAD binding domain SWP_RS16890 PF03937 Flavinator of succinate dehydrogenase SWP_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS16895 PF03466 LysR substrate binding domain SWP_RS16905 PF06965 Na+/H+ antiporter 1 SWP_RS16910 PF00303 Thymidylate synthase SWP_RS16915 PF01925 Sulfite exporter TauE/SafE SWP_RS16920 PF01590 GAF domain SWP_RS16920 PF05524 PEP-utilising enzyme, N-terminal SWP_RS16920 PF02896 PEP-utilising enzyme, TIM barrel domain SWP_RS16920 PF00391 PEP-utilising enzyme, mobile domain SWP_RS16925 PF00293 NUDIX domain SWP_RS16935 PF02976 DNA mismatch repair enzyme MutH SWP_RS16945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS16945 PF03466 LysR substrate binding domain SWP_RS16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS16950 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS16950 PF18415 Histidine kinase receptor ArcB trans-membrane domain SWP_RS16950 PF00989 PAS fold SWP_RS16950 PF00072 Response regulator receiver domain SWP_RS16950 PF01627 Hpt domain SWP_RS16955 PF04055 Radical SAM superfamily SWP_RS16955 PF16199 Radical_SAM C-terminal domain SWP_RS16960 PF01493 GXGXG motif SWP_RS16960 PF04898 Glutamate synthase central domain SWP_RS16960 PF00310 Glutamine amidotransferases class-II SWP_RS16960 PF01645 Conserved region in glutamate synthase SWP_RS16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS16965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SWP_RS16970 PF00398 Ribosomal RNA adenine dimethylase SWP_RS16980 PF00294 pfkB family carbohydrate kinase SWP_RS16985 PF01156 Inosine-uridine preferring nucleoside hydrolase SWP_RS16990 PF00440 Bacterial regulatory proteins, tetR family SWP_RS16990 PF13977 BetI-type transcriptional repressor, C-terminal SWP_RS16995 PF00171 Aldehyde dehydrogenase family SWP_RS17000 PF05199 GMC oxidoreductase SWP_RS17000 PF00732 GMC oxidoreductase SWP_RS17025 PF09055 Nickel-containing superoxide dismutase SWP_RS17040 PF00583 Acetyltransferase (GNAT) family SWP_RS17050 PF02371 Transposase IS116/IS110/IS902 family SWP_RS17050 PF01548 Transposase SWP_RS17075 PF01048 Phosphorylase superfamily SWP_RS17090 PF03458 UPF0126 domain SWP_RS17105 PF00579 tRNA synthetases class I (W and Y) SWP_RS17110 PF01464 Transglycosylase SLT domain SWP_RS17110 PF10145 Phage-related minor tail protein SWP_RS17110 PF01551 Peptidase family M23 SWP_RS17115 PF03702 Anhydro-N-acetylmuramic acid kinase SWP_RS17120 PF00072 Response regulator receiver domain SWP_RS17120 PF00486 Transcriptional regulatory protein, C terminal SWP_RS17125 PF07715 TonB-dependent Receptor Plug Domain SWP_RS17125 PF00593 TonB dependent receptor SWP_RS17130 PF00245 Alkaline phosphatase SWP_RS17135 PF00230 Major intrinsic protein SWP_RS17150 PF01521 Iron-sulphur cluster biosynthesis SWP_RS17160 PF00654 Voltage gated chloride channel SWP_RS17185 PF00034 Cytochrome c SWP_RS17195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS17195 PF00672 HAMP domain SWP_RS17200 PF02423 Ornithine cyclodeaminase/mu-crystallin family SWP_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS17220 PF03466 LysR substrate binding domain SWP_RS17225 PF02225 PA domain SWP_RS17225 PF13860 FlgD Ig-like domain SWP_RS17225 PF05922 Peptidase inhibitor I9 SWP_RS17225 PF00082 Subtilase family SWP_RS17230 PF00849 RNA pseudouridylate synthase SWP_RS17230 PF01479 S4 domain SWP_RS17235 PF01431 Peptidase family M13 SWP_RS17235 PF05649 Peptidase family M13 SWP_RS17255 PF13417 Glutathione S-transferase, N-terminal domain SWP_RS17255 PF00043 Glutathione S-transferase, C-terminal domain SWP_RS17275 PF07308 Protein of unknown function (DUF1456) SWP_RS17280 PF00390 Malic enzyme, N-terminal domain SWP_RS17280 PF03949 Malic enzyme, NAD binding domain SWP_RS17295 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS17300 PF08331 Domain of unknown function (DUF1730) SWP_RS17305 PF07311 Dodecin SWP_RS17310 PF00578 AhpC/TSA family SWP_RS17330 PF13847 Methyltransferase domain SWP_RS17330 PF17827 PrmC N-terminal domain SWP_RS17335 PF03462 PCRF domain SWP_RS17335 PF00472 RF-1 domain SWP_RS17340 PF01488 Shikimate / quinate 5-dehydrogenase SWP_RS17340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SWP_RS17340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SWP_RS17345 PF03550 Outer membrane lipoprotein LolB SWP_RS17350 PF00288 GHMP kinases N terminal domain SWP_RS17350 PF08544 GHMP kinases C terminal SWP_RS17355 PF14572 Phosphoribosyl synthetase-associated domain SWP_RS17355 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SWP_RS17415 PF06071 Protein of unknown function (DUF933) SWP_RS17415 PF01926 50S ribosome-binding GTPase SWP_RS17420 PF01195 Peptidyl-tRNA hydrolase SWP_RS17425 PF01494 FAD binding domain SWP_RS17435 PF01938 TRAM domain SWP_RS17435 PF04055 Radical SAM superfamily SWP_RS17435 PF00919 Uncharacterized protein family UPF0004 SWP_RS17440 PF02562 PhoH-like protein SWP_RS17445 PF02130 Uncharacterized protein family UPF0054 SWP_RS17450 PF00571 CBS domain SWP_RS17450 PF03471 Transporter associated domain SWP_RS17455 PF00795 Carbon-nitrogen hydrolase SWP_RS17460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS17460 PF02743 Cache domain SWP_RS17460 PF00672 HAMP domain SWP_RS17470 PF00133 tRNA synthetases class I (I, L, M and V) SWP_RS17470 PF13603 Leucyl-tRNA synthetase, Domain 2 SWP_RS17470 PF08264 Anticodon-binding domain of tRNA SWP_RS17475 PF04390 Lipopolysaccharide-assembly SWP_RS17485 PF01467 Cytidylyltransferase-like SWP_RS17495 PF02590 Predicted SPOUT methyltransferase SWP_RS17500 PF03717 Penicillin-binding Protein dimerisation domain SWP_RS17500 PF00905 Penicillin binding protein transpeptidase domain SWP_RS17505 PF01098 Cell cycle protein SWP_RS17510 PF13406 Transglycosylase SLT domain SWP_RS17515 PF05036 Sporulation related domain SWP_RS17515 PF03330 Lytic transglycolase SWP_RS17520 PF00768 D-alanyl-D-alanine carboxypeptidase SWP_RS17520 PF07943 Penicillin-binding protein 5, C-terminal domain SWP_RS17525 PF04359 Protein of unknown function (DUF493) SWP_RS17530 PF03099 Biotin/lipoate A/B protein ligase family SWP_RS17535 PF04055 Radical SAM superfamily SWP_RS17535 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SWP_RS17585 PF07724 AAA domain (Cdc48 subfamily) SWP_RS17585 PF17871 AAA lid domain SWP_RS17585 PF10431 C-terminal, D2-small domain, of ClpB protein SWP_RS17585 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS17585 PF02861 Clp amino terminal domain, pathogenicity island component SWP_RS17590 PF02578 Multi-copper polyphenol oxidoreductase laccase SWP_RS17595 PF00849 RNA pseudouridylate synthase SWP_RS17595 PF01479 S4 domain SWP_RS17600 PF13525 Outer membrane lipoprotein SWP_RS17625 PF07715 TonB-dependent Receptor Plug Domain SWP_RS17625 PF00593 TonB dependent receptor SWP_RS17635 PF03965 Penicillinase repressor SWP_RS17640 PF03544 Gram-negative bacterial TonB protein C-terminal SWP_RS17645 PF00793 DAHP synthetase I family SWP_RS17660 PF00909 Ammonium Transporter Family SWP_RS17665 PF00543 Nitrogen regulatory protein P-II SWP_RS17675 PF02335 Cytochrome c552 SWP_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS17680 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SWP_RS17680 PF00672 HAMP domain SWP_RS17680 PF07730 Histidine kinase SWP_RS17685 PF00196 Bacterial regulatory proteins, luxR family SWP_RS17685 PF00072 Response regulator receiver domain SWP_RS17690 PF06062 Uncharacterised protein family (UPF0231) SWP_RS17695 PF01590 GAF domain SWP_RS17695 PF00158 Sigma-54 interaction domain SWP_RS17700 PF12801 4Fe-4S binding domain SWP_RS17700 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SWP_RS17700 PF13746 4Fe-4S dicluster domain SWP_RS17705 PF00501 AMP-binding enzyme SWP_RS17705 PF13193 AMP-binding enzyme C-terminal domain SWP_RS17725 PF07963 Prokaryotic N-terminal methylation motif SWP_RS17735 PF08212 Lipocalin-like domain SWP_RS17740 PF00664 ABC transporter transmembrane region SWP_RS17740 PF00005 ABC transporter SWP_RS17745 PF01243 Pyridoxamine 5'-phosphate oxidase SWP_RS17750 PF06228 Haem utilisation ChuX/HutX SWP_RS17755 PF07715 TonB-dependent Receptor Plug Domain SWP_RS17755 PF00593 TonB dependent receptor SWP_RS17765 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS17770 PF02472 Biopolymer transport protein ExbD/TolR SWP_RS17775 PF01497 Periplasmic binding protein SWP_RS17780 PF01032 FecCD transport family SWP_RS17785 PF00005 ABC transporter SWP_RS17790 PF04055 Radical SAM superfamily SWP_RS17810 PF03264 NapC/NirT cytochrome c family, N-terminal region SWP_RS17815 PF01568 Molydopterin dinucleotide binding domain SWP_RS17815 PF18364 Molybdopterin oxidoreductase N-terminal domain SWP_RS17815 PF00384 Molybdopterin oxidoreductase SWP_RS17820 PF02613 Nitrate reductase delta subunit SWP_RS17830 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS17845 PF05154 TM2 domain SWP_RS17855 PF00072 Response regulator receiver domain SWP_RS17855 PF00486 Transcriptional regulatory protein, C terminal SWP_RS17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS17860 PF00672 HAMP domain SWP_RS17860 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS17860 PF16527 Two-component sensor protein CpxA, periplasmic domain SWP_RS17875 PF13443 Cro/C1-type HTH DNA-binding domain SWP_RS17915 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SWP_RS17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS17930 PF12833 Helix-turn-helix domain SWP_RS17930 PF02311 AraC-like ligand binding domain SWP_RS17945 PF03544 Gram-negative bacterial TonB protein C-terminal SWP_RS17950 PF07715 TonB-dependent Receptor Plug Domain SWP_RS17950 PF00593 TonB dependent receptor SWP_RS17955 PF03553 Na+/H+ antiporter family SWP_RS17970 PF03889 Alternative ribosome-rescue factor A SWP_RS17990 PF01979 Amidohydrolase family SWP_RS17990 PF13382 Adenine deaminase C-terminal domain SWP_RS18000 PF05726 Pirin C-terminal cupin domain SWP_RS18000 PF02678 Pirin SWP_RS18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS18020 PF03466 LysR substrate binding domain SWP_RS18025 PF01590 GAF domain SWP_RS18025 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS18025 PF00563 EAL domain SWP_RS18025 PF00360 Phytochrome region SWP_RS18040 PF13439 Glycosyltransferase Family 4 SWP_RS18040 PF00534 Glycosyl transferases group 1 SWP_RS18050 PF12724 Flavodoxin domain SWP_RS18060 PF09375 Imelysin SWP_RS18100 PF03600 Citrate transporter SWP_RS18100 PF02080 TrkA-C domain SWP_RS18105 PF00009 Elongation factor Tu GTP binding domain SWP_RS18110 PF01507 Phosphoadenosine phosphosulfate reductase family SWP_RS18115 PF14824 Sirohaem biosynthesis protein central SWP_RS18115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SWP_RS18115 PF10414 Sirohaem synthase dimerisation region SWP_RS18120 PF02253 Phospholipase A1 SWP_RS18135 PF01812 5-formyltetrahydrofolate cyclo-ligase family SWP_RS18140 PF03167 Uracil DNA glycosylase superfamily SWP_RS18145 PF07963 Prokaryotic N-terminal methylation motif SWP_RS18170 PF00004 ATPase family associated with various cellular activities (AAA) SWP_RS18170 PF17862 AAA+ lid domain SWP_RS18170 PF01434 Peptidase family M41 SWP_RS18175 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS18175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS18180 PF11742 Protein of unknown function (DUF3302) SWP_RS18185 PF02222 ATP-grasp domain SWP_RS18190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SWP_RS18190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS18200 PF05099 Tellurite resistance protein TerB SWP_RS18200 PF00226 DnaJ domain SWP_RS18205 PF00483 Nucleotidyl transferase SWP_RS18210 PF01636 Phosphotransferase enzyme family SWP_RS18215 PF04453 LPS transport system D SWP_RS18215 PF03968 OstA-like protein SWP_RS18220 PF09312 SurA N-terminal domain SWP_RS18220 PF00639 PPIC-type PPIASE domain SWP_RS18225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SWP_RS18230 PF00398 Ribosomal RNA adenine dimethylase SWP_RS18235 PF04379 ApaG domain SWP_RS18240 PF00149 Calcineurin-like phosphoesterase SWP_RS18245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS18245 PF00672 HAMP domain SWP_RS18255 PF00186 Dihydrofolate reductase SWP_RS18260 PF12821 Threonine/Serine exporter, ThrE SWP_RS18265 PF06738 Putative threonine/serine exporter SWP_RS18270 PF01926 50S ribosome-binding GTPase SWP_RS18270 PF01018 GTP1/OBG SWP_RS18275 PF01016 Ribosomal L27 protein SWP_RS18280 PF00829 Ribosomal prokaryotic L21 protein SWP_RS18285 PF00348 Polyprenyl synthetase SWP_RS18290 PF00056 lactate/malate dehydrogenase, NAD binding domain SWP_RS18290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SWP_RS18295 PF02863 Arginine repressor, C-terminal domain SWP_RS18295 PF01316 Arginine repressor, DNA binding domain SWP_RS18305 PF04261 Dyp-type peroxidase family SWP_RS18310 PF08402 TOBE domain SWP_RS18310 PF00005 ABC transporter SWP_RS18315 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS18320 PF13416 Bacterial extracellular solute-binding protein SWP_RS18330 PF00970 Oxidoreductase FAD-binding domain SWP_RS18330 PF00175 Oxidoreductase NAD-binding domain SWP_RS18350 PF00005 ABC transporter SWP_RS18350 PF00664 ABC transporter transmembrane region SWP_RS18355 PF03916 Polysulphide reductase, NrfD SWP_RS18360 PF13247 4Fe-4S dicluster domain SWP_RS18375 PF03466 LysR substrate binding domain SWP_RS18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS18380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS18380 PF03466 LysR substrate binding domain SWP_RS18390 PF03466 LysR substrate binding domain SWP_RS18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS18400 PF00375 Sodium:dicarboxylate symporter family SWP_RS18410 PF01479 S4 domain SWP_RS18410 PF00849 RNA pseudouridylate synthase SWP_RS18420 PF01979 Amidohydrolase family SWP_RS18445 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SWP_RS18445 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SWP_RS18475 PF00034 Cytochrome c SWP_RS18475 PF03150 Di-haem cytochrome c peroxidase SWP_RS18480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SWP_RS18480 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SWP_RS18490 PF00115 Cytochrome C and Quinol oxidase polypeptide I SWP_RS18495 PF00034 Cytochrome c SWP_RS18500 PF17425 Arylsulfotransferase Ig-like domain SWP_RS18500 PF05935 Arylsulfotransferase (ASST) SWP_RS18505 PF03502 Nucleoside-specific channel-forming protein, Tsx SWP_RS18515 PF02600 Disulfide bond formation protein DsbB SWP_RS18530 PF01266 FAD dependent oxidoreductase SWP_RS18535 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS18540 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS18545 PF08402 TOBE domain SWP_RS18545 PF00005 ABC transporter SWP_RS18550 PF13416 Bacterial extracellular solute-binding protein SWP_RS18555 PF00120 Glutamine synthetase, catalytic domain SWP_RS18560 PF07722 Peptidase C26 SWP_RS18570 PF01266 FAD dependent oxidoreductase SWP_RS18575 PF00583 Acetyltransferase (GNAT) family SWP_RS18580 PF00326 Prolyl oligopeptidase family SWP_RS18585 PF00583 Acetyltransferase (GNAT) family SWP_RS18595 PF14863 Alkyl sulfatase dimerisation SWP_RS18595 PF00753 Metallo-beta-lactamase superfamily SWP_RS18595 PF14864 Alkyl sulfatase C-terminal SWP_RS18600 PF00665 Integrase core domain SWP_RS18605 PF01527 Transposase SWP_RS18615 PF05593 RHS Repeat SWP_RS18615 PF14220 Domain of unknown function (DUF4329) SWP_RS18615 PF03527 RHS protein SWP_RS18630 PF14220 Domain of unknown function (DUF4329) SWP_RS18630 PF05593 RHS Repeat SWP_RS18630 PF03527 RHS protein SWP_RS18640 PF00171 Aldehyde dehydrogenase family SWP_RS18645 PF00202 Aminotransferase class-III SWP_RS18650 PF00171 Aldehyde dehydrogenase family SWP_RS18715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SWP_RS18715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS18720 PF01321 Creatinase/Prolidase N-terminal domain SWP_RS18720 PF00557 Metallopeptidase family M24 SWP_RS18725 PF00480 ROK family SWP_RS18730 PF07690 Major Facilitator Superfamily SWP_RS18735 PF01321 Creatinase/Prolidase N-terminal domain SWP_RS18735 PF00557 Metallopeptidase family M24 SWP_RS18745 PF00271 Helicase conserved C-terminal domain SWP_RS18745 PF00270 DEAD/DEAH box helicase SWP_RS18750 PF00578 AhpC/TSA family SWP_RS18760 PF00082 Subtilase family SWP_RS18760 PF05922 Peptidase inhibitor I9 SWP_RS18765 PF01145 SPFH domain / Band 7 family SWP_RS18765 PF15975 Flotillin SWP_RS18780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SWP_RS18800 PF03739 Lipopolysaccharide export system permease LptF/LptG SWP_RS18805 PF03739 Lipopolysaccharide export system permease LptF/LptG SWP_RS18810 PF00883 Cytosol aminopeptidase family, catalytic domain SWP_RS18810 PF02789 Cytosol aminopeptidase family, N-terminal domain SWP_RS18840 PF01368 DHH family SWP_RS18840 PF02272 DHHA1 domain SWP_RS18840 PF17768 RecJ OB domain SWP_RS18845 PF13098 Thioredoxin-like domain SWP_RS18845 PF10411 Disulfide bond isomerase protein N-terminus SWP_RS18850 PF02899 Phage integrase, N-terminal SAM-like domain SWP_RS18850 PF00589 Phage integrase family SWP_RS18855 PF05525 Branched-chain amino acid transport protein SWP_RS18860 PF05175 Methyltransferase small domain SWP_RS18865 PF00271 Helicase conserved C-terminal domain SWP_RS18865 PF00270 DEAD/DEAH box helicase SWP_RS18870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS18875 PF00873 AcrB/AcrD/AcrF family SWP_RS18915 PF01116 Fructose-bisphosphate aldolase class-II SWP_RS18920 PF00162 Phosphoglycerate kinase SWP_RS18925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SWP_RS18925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SWP_RS18930 PF02779 Transketolase, pyrimidine binding domain SWP_RS18930 PF02780 Transketolase, C-terminal domain SWP_RS18930 PF00456 Transketolase, thiamine diphosphate binding domain SWP_RS18935 PF02772 S-adenosylmethionine synthetase, central domain SWP_RS18935 PF00438 S-adenosylmethionine synthetase, N-terminal domain SWP_RS18935 PF02773 S-adenosylmethionine synthetase, C-terminal domain SWP_RS18995 PF00375 Sodium:dicarboxylate symporter family SWP_RS19010 PF03315 Serine dehydratase beta chain SWP_RS19010 PF03313 Serine dehydratase alpha chain SWP_RS19015 PF03222 Tryptophan/tyrosine permease family SWP_RS19020 PF01931 Protein of unknown function DUF84 SWP_RS19025 PF00583 Acetyltransferase (GNAT) family SWP_RS19030 PF00248 Aldo/keto reductase family SWP_RS19035 PF00266 Aminotransferase class-V SWP_RS19040 PF02657 Fe-S metabolism associated domain SWP_RS19050 PF16868 NMT1-like family SWP_RS19060 PF13302 Acetyltransferase (GNAT) domain SWP_RS19070 PF08000 Bacterial PH domain SWP_RS19075 PF12392 Collagenase SWP_RS19075 PF01136 Peptidase family U32 SWP_RS19095 PF00158 Sigma-54 interaction domain SWP_RS19095 PF01590 GAF domain SWP_RS19110 PF00970 Oxidoreductase FAD-binding domain SWP_RS19110 PF00175 Oxidoreductase NAD-binding domain SWP_RS19110 PF00042 Globin SWP_RS19130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SWP_RS19135 PF00849 RNA pseudouridylate synthase SWP_RS19140 PF00563 EAL domain SWP_RS19140 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS19140 PF03707 Bacterial signalling protein N terminal repeat SWP_RS19145 PF07995 Glucose / Sorbosone dehydrogenase SWP_RS19160 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain SWP_RS19160 PF06165 Glycosyltransferase family 36 SWP_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19175 PF03466 LysR substrate binding domain SWP_RS19190 PF00152 tRNA synthetases class II (D, K and N) SWP_RS19190 PF01336 OB-fold nucleic acid binding domain SWP_RS19195 PF03462 PCRF domain SWP_RS19195 PF00472 RF-1 domain SWP_RS19210 PF13276 HTH-like domain SWP_RS19210 PF00665 Integrase core domain SWP_RS19210 PF13333 Integrase core domain SWP_RS19215 PF01527 Transposase SWP_RS19250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SWP_RS19250 PF01266 FAD dependent oxidoreductase SWP_RS19255 PF01047 MarR family SWP_RS19260 PF02566 OsmC-like protein SWP_RS19280 PF00072 Response regulator receiver domain SWP_RS19280 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS19285 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS19285 PF13192 Thioredoxin domain SWP_RS19290 PF00578 AhpC/TSA family SWP_RS19290 PF10417 C-terminal domain of 1-Cys peroxiredoxin SWP_RS19310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SWP_RS19310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS19340 PF00849 RNA pseudouridylate synthase SWP_RS19345 PF01037 Lrp/AsnC ligand binding domain SWP_RS19365 PF01842 ACT domain SWP_RS19365 PF00696 Amino acid kinase family SWP_RS19375 PF00072 Response regulator receiver domain SWP_RS19375 PF00486 Transcriptional regulatory protein, C terminal SWP_RS19380 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SWP_RS19380 PF00326 Prolyl oligopeptidase family SWP_RS19385 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SWP_RS19395 PF03466 LysR substrate binding domain SWP_RS19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19400 PF14537 Cytochrome c3 SWP_RS19400 PF00890 FAD binding domain SWP_RS19405 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS19405 PF00497 Bacterial extracellular solute-binding proteins, family 3 SWP_RS19410 PF00158 Sigma-54 interaction domain SWP_RS19410 PF00072 Response regulator receiver domain SWP_RS19410 PF02954 Bacterial regulatory protein, Fis family SWP_RS19415 PF00375 Sodium:dicarboxylate symporter family SWP_RS19440 PF01235 Sodium:alanine symporter family SWP_RS19510 PF14864 Alkyl sulfatase C-terminal SWP_RS19510 PF14863 Alkyl sulfatase dimerisation SWP_RS19510 PF00753 Metallo-beta-lactamase superfamily SWP_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19515 PF03466 LysR substrate binding domain SWP_RS19525 PF00905 Penicillin binding protein transpeptidase domain SWP_RS19525 PF14814 Bifunctional transglycosylase second domain SWP_RS19525 PF00912 Transglycosylase SWP_RS19530 PF00271 Helicase conserved C-terminal domain SWP_RS19530 PF08482 ATP-dependent helicase C-terminal SWP_RS19530 PF04408 Helicase associated domain (HA2) SWP_RS19530 PF00270 DEAD/DEAH box helicase SWP_RS19550 PF00883 Cytosol aminopeptidase family, catalytic domain SWP_RS19550 PF12404 Peptidase SWP_RS19555 PF17746 SfsA N-terminal OB domain SWP_RS19555 PF03749 Sugar fermentation stimulation protein RE domain SWP_RS19560 PF01258 Prokaryotic dksA/traR C4-type zinc finger SWP_RS19565 PF00749 tRNA synthetases class I (E and Q), catalytic domain SWP_RS19570 PF01743 Poly A polymerase head domain SWP_RS19570 PF12627 Probable RNA and SrmB- binding site of polymerase A SWP_RS19570 PF12626 Polymerase A arginine-rich C-terminus SWP_RS19575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SWP_RS19580 PF02548 Ketopantoate hydroxymethyltransferase SWP_RS19585 PF02569 Pantoate-beta-alanine ligase SWP_RS19605 PF01061 ABC-2 type transporter SWP_RS19610 PF00005 ABC transporter SWP_RS19615 PF00156 Phosphoribosyl transferase domain SWP_RS19620 PF02441 Flavoprotein SWP_RS19625 PF08245 Mur ligase middle domain SWP_RS19625 PF02875 Mur ligase family, glutamate ligase domain SWP_RS19625 PF01225 Mur ligase family, catalytic domain SWP_RS19635 PF00916 Sulfate permease family SWP_RS19635 PF01740 STAS domain SWP_RS19640 PF00582 Universal stress protein family SWP_RS19645 PF03605 Anaerobic c4-dicarboxylate membrane transporter SWP_RS19650 PF00881 Nitroreductase family SWP_RS19670 PF17158 Membrane-associated sensor, integral membrane domain SWP_RS19670 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS19675 PF01053 Cys/Met metabolism PLP-dependent enzyme SWP_RS19685 PF03553 Na+/H+ antiporter family SWP_RS19690 PF17158 Membrane-associated sensor, integral membrane domain SWP_RS19690 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS19695 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SWP_RS19695 PF00326 Prolyl oligopeptidase family SWP_RS19710 PF01479 S4 domain SWP_RS19710 PF00849 RNA pseudouridylate synthase SWP_RS19730 PF10459 Peptidase S46 SWP_RS19735 PF03222 Tryptophan/tyrosine permease family SWP_RS19740 PF01169 Uncharacterized protein family UPF0016 SWP_RS19745 PF06628 Catalase-related immune-responsive SWP_RS19745 PF00199 Catalase SWP_RS19755 PF03061 Thioesterase superfamily SWP_RS19760 PF01048 Phosphorylase superfamily SWP_RS19765 PF07670 Nucleoside recognition SWP_RS19765 PF07662 Na+ dependent nucleoside transporter C-terminus SWP_RS19765 PF01773 Na+ dependent nucleoside transporter N-terminus SWP_RS19775 PF00149 Calcineurin-like phosphoesterase SWP_RS19775 PF02872 5'-nucleotidase, C-terminal domain SWP_RS19800 PF00196 Bacterial regulatory proteins, luxR family SWP_RS19800 PF00072 Response regulator receiver domain SWP_RS19805 PF09997 Predicted membrane protein (DUF2238) SWP_RS19810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SWP_RS19810 PF01842 ACT domain SWP_RS19810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SWP_RS19815 PF01571 Aminomethyltransferase folate-binding domain SWP_RS19820 PF00072 Response regulator receiver domain SWP_RS19825 PF01627 Hpt domain SWP_RS19825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS19825 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS19825 PF00672 HAMP domain SWP_RS19825 PF00072 Response regulator receiver domain SWP_RS19830 PF00005 ABC transporter SWP_RS19835 PF12704 MacB-like periplasmic core domain SWP_RS19835 PF02687 FtsX-like permease family SWP_RS19850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS19850 PF01568 Molydopterin dinucleotide binding domain SWP_RS19850 PF10518 TAT (twin-arginine translocation) pathway signal sequence SWP_RS19850 PF00384 Molybdopterin oxidoreductase SWP_RS19855 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SWP_RS19870 PF03466 LysR substrate binding domain SWP_RS19870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19875 PF01810 LysE type translocator SWP_RS19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19885 PF03466 LysR substrate binding domain SWP_RS19890 PF03707 Bacterial signalling protein N terminal repeat SWP_RS19890 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS19890 PF00563 EAL domain SWP_RS19895 PF02785 Biotin carboxylase C-terminal domain SWP_RS19895 PF00289 Biotin carboxylase, N-terminal domain SWP_RS19895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SWP_RS19900 PF03466 LysR substrate binding domain SWP_RS19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS19905 PF00905 Penicillin binding protein transpeptidase domain SWP_RS19915 PF10263 SprT-like family SWP_RS19920 PF04231 Endonuclease I SWP_RS19925 PF04452 RNA methyltransferase SWP_RS19930 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SWP_RS19930 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SWP_RS19935 PF00245 Alkaline phosphatase SWP_RS19940 PF05175 Methyltransferase small domain SWP_RS19940 PF08468 Methyltransferase small domain N-terminal SWP_RS19955 PF00326 Prolyl oligopeptidase family SWP_RS19975 PF07411 Domain of unknown function (DUF1508) SWP_RS20000 PF01527 Transposase SWP_RS20010 PF01527 Transposase SWP_RS20015 PF00665 Integrase core domain SWP_RS20035 PF02463 RecF/RecN/SMC N terminal domain SWP_RS20050 PF00665 Integrase core domain SWP_RS20055 PF01527 Transposase SWP_RS20065 PF00145 C-5 cytosine-specific DNA methylase SWP_RS20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS20085 PF00183 Hsp90 protein SWP_RS20100 PF00899 ThiF family SWP_RS20115 PF05724 Thiopurine S-methyltransferase (TPMT) SWP_RS20130 PF04186 FxsA cytoplasmic membrane protein SWP_RS20135 PF03091 CutA1 divalent ion tolerance protein SWP_RS20140 PF11412 Disulphide bond corrector protein DsbC SWP_RS20140 PF02683 Cytochrome C biogenesis protein transmembrane region SWP_RS20145 PF00999 Sodium/hydrogen exchanger family SWP_RS20145 PF02254 TrkA-N domain SWP_RS20150 PF02837 Glycosyl hydrolases family 2, sugar binding domain SWP_RS20150 PF02929 Beta galactosidase small chain SWP_RS20150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SWP_RS20150 PF16353 Domain of unknown function(DUF4981) SWP_RS20150 PF00703 Glycosyl hydrolases family 2 SWP_RS20155 PF00474 Sodium:solute symporter family SWP_RS20160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SWP_RS20160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SWP_RS20165 PF08544 GHMP kinases C terminal SWP_RS20165 PF10509 Galactokinase galactose-binding signature SWP_RS20165 PF00288 GHMP kinases N terminal domain SWP_RS20170 PF01263 Aldose 1-epimerase SWP_RS20185 PF00436 Single-strand binding protein family SWP_RS20235 PF13698 Domain of unknown function (DUF4156) SWP_RS20245 PF07690 Major Facilitator Superfamily SWP_RS20250 PF17760 UvrA interaction domain SWP_RS20250 PF17755 UvrA DNA-binding domain SWP_RS20250 PF00005 ABC transporter SWP_RS20260 PF04389 Peptidase family M28 SWP_RS20265 PF12343 Cold shock protein DEAD box A SWP_RS20265 PF00270 DEAD/DEAH box helicase SWP_RS20265 PF00271 Helicase conserved C-terminal domain SWP_RS20265 PF03880 DbpA RNA binding domain SWP_RS20280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SWP_RS20285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SWP_RS20290 PF00742 Homoserine dehydrogenase SWP_RS20290 PF00696 Amino acid kinase family SWP_RS20290 PF03447 Homoserine dehydrogenase, NAD binding domain SWP_RS20295 PF01053 Cys/Met metabolism PLP-dependent enzyme SWP_RS20300 PF01340 Met Apo-repressor, MetJ SWP_RS20315 PF12833 Helix-turn-helix domain SWP_RS20315 PF14525 AraC-binding-like domain SWP_RS20320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SWP_RS20320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SWP_RS20340 PF00732 GMC oxidoreductase SWP_RS20340 PF05199 GMC oxidoreductase SWP_RS20365 PF03466 LysR substrate binding domain SWP_RS20365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS20370 PF00106 short chain dehydrogenase SWP_RS20390 PF00005 ABC transporter SWP_RS20390 PF00664 ABC transporter transmembrane region SWP_RS20395 PF00664 ABC transporter transmembrane region SWP_RS20395 PF00005 ABC transporter SWP_RS20400 PF13533 Biotin-lipoyl like SWP_RS20420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SWP_RS20445 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS20445 PF13185 GAF domain SWP_RS20450 PF00072 Response regulator receiver domain SWP_RS20455 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS20455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS20460 PF16363 GDP-mannose 4,6 dehydratase SWP_RS20470 PF00849 RNA pseudouridylate synthase SWP_RS20490 PF04074 YhcH/YjgK/YiaL SWP_RS20500 PF00266 Aminotransferase class-V SWP_RS20505 PF03411 Penicillin-insensitive murein endopeptidase SWP_RS20510 PF00072 Response regulator receiver domain SWP_RS20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS20510 PF09308 LuxQ, periplasmic SWP_RS20510 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS20515 PF00034 Cytochrome c SWP_RS20515 PF03150 Di-haem cytochrome c peroxidase SWP_RS20525 PF00873 AcrB/AcrD/AcrF family SWP_RS20555 PF00472 RF-1 domain SWP_RS20560 PF01220 Dehydroquinase class II SWP_RS20565 PF00364 Biotin-requiring enzyme SWP_RS20570 PF00106 short chain dehydrogenase SWP_RS20590 PF12833 Helix-turn-helix domain SWP_RS20590 PF06445 GyrI-like small molecule binding domain SWP_RS20605 PF12833 Helix-turn-helix domain SWP_RS20605 PF02311 AraC-like ligand binding domain SWP_RS20615 PF01980 tRNA-methyltransferase O SWP_RS20625 PF10502 Signal peptidase, peptidase S26 SWP_RS20655 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor SWP_RS20655 PF07963 Prokaryotic N-terminal methylation motif SWP_RS20670 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SWP_RS20675 PF00175 Oxidoreductase NAD-binding domain SWP_RS20685 PF12679 ABC-2 family transporter protein SWP_RS20690 PF00005 ABC transporter SWP_RS20695 PF05048 Periplasmic copper-binding protein (NosD) SWP_RS20700 PF05573 NosL SWP_RS20705 PF03916 Polysulphide reductase, NrfD SWP_RS20710 PF13247 4Fe-4S dicluster domain SWP_RS20720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SWP_RS20720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SWP_RS20735 PF01578 Cytochrome C assembly protein SWP_RS20735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SWP_RS20740 PF03918 Cytochrome C biogenesis protein SWP_RS20750 PF00486 Transcriptional regulatory protein, C terminal SWP_RS20755 PF03553 Na+/H+ antiporter family SWP_RS20780 PF01177 Asp/Glu/Hydantoin racemase SWP_RS20820 PF00873 AcrB/AcrD/AcrF family SWP_RS20830 PF11798 IMS family HHH motif SWP_RS20830 PF13438 Domain of unknown function (DUF4113) SWP_RS20830 PF00817 impB/mucB/samB family SWP_RS20830 PF11799 impB/mucB/samB family C-terminal domain SWP_RS20885 PF01040 UbiA prenyltransferase family SWP_RS20890 PF13361 UvrD-like helicase C-terminal domain SWP_RS20890 PF00580 UvrD/REP helicase N-terminal domain SWP_RS20895 PF01042 Endoribonuclease L-PSP SWP_RS20900 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS20900 PF03707 Bacterial signalling protein N terminal repeat SWP_RS20900 PF00563 EAL domain SWP_RS20905 PF00293 NUDIX domain SWP_RS20910 PF01145 SPFH domain / Band 7 family SWP_RS20915 PF01145 SPFH domain / Band 7 family SWP_RS20930 PF01048 Phosphorylase superfamily SWP_RS20935 PF04325 Protein of unknown function (DUF465) SWP_RS20945 PF05552 Conserved TM helix SWP_RS20945 PF00924 Mechanosensitive ion channel SWP_RS20955 PF13673 Acetyltransferase (GNAT) domain SWP_RS20960 PF07690 Major Facilitator Superfamily SWP_RS20965 PF13533 Biotin-lipoyl like SWP_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS20970 PF03466 LysR substrate binding domain SWP_RS20980 PF03466 LysR substrate binding domain SWP_RS20980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS20985 PF01709 Transcriptional regulator SWP_RS20990 PF04134 Protein of unknown function, DUF393 SWP_RS20995 PF01323 DSBA-like thioredoxin domain SWP_RS21005 PF13411 MerR HTH family regulatory protein SWP_RS21010 PF01808 AICARFT/IMPCHase bienzyme SWP_RS21010 PF02142 MGS-like domain SWP_RS21015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SWP_RS21015 PF02843 Phosphoribosylglycinamide synthetase, C domain SWP_RS21015 PF02844 Phosphoribosylglycinamide synthetase, N domain SWP_RS21025 PF00106 short chain dehydrogenase SWP_RS21040 PF00486 Transcriptional regulatory protein, C terminal SWP_RS21040 PF00072 Response regulator receiver domain SWP_RS21045 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS21045 PF13426 PAS domain SWP_RS21045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS21045 PF00672 HAMP domain SWP_RS21055 PF01208 Uroporphyrinogen decarboxylase (URO-D) SWP_RS21060 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SWP_RS21065 PF00330 Aconitase family (aconitate hydratase) SWP_RS21065 PF06434 Aconitate hydratase 2 N-terminus SWP_RS21065 PF11791 Aconitate B N-terminal domain SWP_RS21070 PF13419 Haloacid dehalogenase-like hydrolase SWP_RS21080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SWP_RS21085 PF05649 Peptidase family M13 SWP_RS21085 PF01431 Peptidase family M13 SWP_RS21090 PF01734 Patatin-like phospholipase SWP_RS21095 PF00563 EAL domain SWP_RS21095 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS21095 PF03707 Bacterial signalling protein N terminal repeat SWP_RS21100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS21100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SWP_RS21105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SWP_RS21105 PF00364 Biotin-requiring enzyme SWP_RS21105 PF02817 e3 binding domain SWP_RS21110 PF17831 Pyruvate dehydrogenase E1 component middle domain SWP_RS21110 PF00456 Transketolase, thiamine diphosphate binding domain SWP_RS21115 PF00392 Bacterial regulatory proteins, gntR family SWP_RS21115 PF07729 FCD domain SWP_RS21125 PF01510 N-acetylmuramoyl-L-alanine amidase SWP_RS21130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SWP_RS21130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SWP_RS21135 PF00114 Pilin (bacterial filament) SWP_RS21135 PF07963 Prokaryotic N-terminal methylation motif SWP_RS21140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SWP_RS21140 PF00437 Type II/IV secretion system protein SWP_RS21145 PF00482 Type II secretion system (T2SS), protein F SWP_RS21150 PF01478 Type IV leader peptidase family SWP_RS21150 PF06750 Bacterial Peptidase A24 N-terminal domain SWP_RS21155 PF01121 Dephospho-CoA kinase SWP_RS21160 PF07072 Cell division protein SWP_RS21165 PF03884 DNA gyrase inhibitor YacG SWP_RS21170 PF00293 NUDIX domain SWP_RS21180 PF05193 Peptidase M16 inactive domain SWP_RS21180 PF00675 Insulinase (Peptidase family M16) SWP_RS21215 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS21215 PF00563 EAL domain SWP_RS21215 PF03707 Bacterial signalling protein N terminal repeat SWP_RS21225 PF07690 Major Facilitator Superfamily SWP_RS21230 PF03466 LysR substrate binding domain SWP_RS21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS21265 PF13520 Amino acid permease SWP_RS21270 PF01037 Lrp/AsnC ligand binding domain SWP_RS21275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SWP_RS21275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SWP_RS21275 PF16582 Middle domain of thiamine pyrophosphate SWP_RS21280 PF12697 Alpha/beta hydrolase family SWP_RS21285 PF13378 Enolase C-terminal domain-like SWP_RS21290 PF13193 AMP-binding enzyme C-terminal domain SWP_RS21290 PF00501 AMP-binding enzyme SWP_RS21300 PF00140 Sigma-70 factor, region 1.2 SWP_RS21300 PF04542 Sigma-70 region 2 SWP_RS21300 PF04545 Sigma-70, region 4 SWP_RS21305 PF18075 FtsX extracellular domain SWP_RS21310 PF00005 ABC transporter SWP_RS21315 PF00448 SRP54-type protein, GTPase domain SWP_RS21315 PF02881 SRP54-type protein, helical bundle domain SWP_RS21330 PF03264 NapC/NirT cytochrome c family, N-terminal region SWP_RS21355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS21360 PF00873 AcrB/AcrD/AcrF family SWP_RS21365 PF18029 Glyoxalase-like domain SWP_RS21365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS21370 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS21375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS21375 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS21390 PF03222 Tryptophan/tyrosine permease family SWP_RS21395 PF01553 Acyltransferase SWP_RS21400 PF00717 Peptidase S24-like SWP_RS21400 PF01726 LexA DNA binding domain SWP_RS21410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SWP_RS21410 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SWP_RS21415 PF00115 Cytochrome C and Quinol oxidase polypeptide I SWP_RS21420 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SWP_RS21425 PF00510 Cytochrome c oxidase subunit III SWP_RS21445 PF02628 Cytochrome oxidase assembly protein SWP_RS21450 PF01040 UbiA prenyltransferase family SWP_RS21455 PF02630 SCO1/SenC SWP_RS21470 PF01554 MatE SWP_RS21475 PF01106 NifU-like domain SWP_RS21475 PF01521 Iron-sulphur cluster biosynthesis SWP_RS21485 PF00156 Phosphoribosyl transferase domain SWP_RS21490 PF00561 alpha/beta hydrolase fold SWP_RS21500 PF00884 Sulfatase SWP_RS21505 PF17674 HHH domain SWP_RS21505 PF00575 S1 RNA binding domain SWP_RS21505 PF09371 Tex-like protein N-terminal domain SWP_RS21505 PF16921 Tex protein YqgF-like domain SWP_RS21510 PF00486 Transcriptional regulatory protein, C terminal SWP_RS21520 PF01752 Collagenase SWP_RS21520 PF08453 Peptidase family M9 N-terminal SWP_RS21530 PF00082 Subtilase family SWP_RS21535 PF00326 Prolyl oligopeptidase family SWP_RS21535 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SWP_RS21550 PF03449 Transcription elongation factor, N-terminal SWP_RS21550 PF01272 Transcription elongation factor, GreA/GreB, C-term SWP_RS21555 PF00072 Response regulator receiver domain SWP_RS21555 PF00486 Transcriptional regulatory protein, C terminal SWP_RS21560 PF00672 HAMP domain SWP_RS21560 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS21560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS21565 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS21570 PF00005 ABC transporter SWP_RS21570 PF03412 Peptidase C39 family SWP_RS21570 PF00664 ABC transporter transmembrane region SWP_RS21575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS21585 PF08534 Redoxin SWP_RS21600 PF01928 CYTH domain SWP_RS21605 PF00155 Aminotransferase class I and II SWP_RS21605 PF00392 Bacterial regulatory proteins, gntR family SWP_RS21610 PF13302 Acetyltransferase (GNAT) domain SWP_RS21615 PF01569 PAP2 superfamily SWP_RS21630 PF00893 Small Multidrug Resistance protein SWP_RS21635 PF00144 Beta-lactamase SWP_RS21650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SWP_RS21655 PF00962 Adenosine/AMP deaminase SWP_RS21670 PF08453 Peptidase family M9 N-terminal SWP_RS21670 PF01752 Collagenase SWP_RS21690 PF04445 Putative SAM-dependent methyltransferase SWP_RS21705 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SWP_RS21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS21720 PF03466 LysR substrate binding domain SWP_RS21725 PF01554 MatE SWP_RS21730 PF01551 Peptidase family M23 SWP_RS21730 PF10145 Phage-related minor tail protein SWP_RS21730 PF01464 Transglycosylase SLT domain SWP_RS21740 PF04011 LemA family SWP_RS21745 PF03806 AbgT putative transporter family SWP_RS21750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SWP_RS21770 PF01548 Transposase SWP_RS21770 PF02371 Transposase IS116/IS110/IS902 family SWP_RS21780 PF00873 AcrB/AcrD/AcrF family SWP_RS21785 PF00529 HlyD membrane-fusion protein of T1SS SWP_RS21785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SWP_RS21820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SWP_RS21820 PF07992 Pyridine nucleotide-disulphide oxidoreductase SWP_RS21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SWP_RS21825 PF03466 LysR substrate binding domain SWP_RS21830 PF07859 alpha/beta hydrolase fold SWP_RS21835 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS21845 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS21850 PF00501 AMP-binding enzyme SWP_RS21850 PF13193 AMP-binding enzyme C-terminal domain SWP_RS21855 PF02515 CoA-transferase family III SWP_RS21860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SWP_RS21860 PF02770 Acyl-CoA dehydrogenase, middle domain SWP_RS21860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SWP_RS21865 PF02028 BCCT, betaine/carnitine/choline family transporter SWP_RS21870 PF01012 Electron transfer flavoprotein domain SWP_RS21875 PF00766 Electron transfer flavoprotein FAD-binding domain SWP_RS21875 PF01012 Electron transfer flavoprotein domain SWP_RS21880 PF01494 FAD binding domain SWP_RS21890 PF00083 Sugar (and other) transporter SWP_RS21915 PF02472 Biopolymer transport protein ExbD/TolR SWP_RS21935 PF06472 ABC transporter transmembrane region 2 SWP_RS21935 PF00005 ABC transporter SWP_RS21940 PF05193 Peptidase M16 inactive domain SWP_RS21940 PF00675 Insulinase (Peptidase family M16) SWP_RS21955 PF03601 Conserved hypothetical protein 698 SWP_RS21965 PF11871 Domain of unknown function (DUF3391) SWP_RS21965 PF01966 HD domain SWP_RS21990 PF00005 ABC transporter SWP_RS22000 PF00425 chorismate binding enzyme SWP_RS22005 PF02592 Putative vitamin uptake transporter SWP_RS22015 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS22015 PF00989 PAS fold SWP_RS22020 PF00158 Sigma-54 interaction domain SWP_RS22020 PF00072 Response regulator receiver domain SWP_RS22020 PF02954 Bacterial regulatory protein, Fis family SWP_RS22025 PF12849 PBP superfamily domain SWP_RS22030 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS22035 PF00005 ABC transporter SWP_RS22035 PF08402 TOBE domain SWP_RS22040 PF12804 MobA-like NTP transferase domain SWP_RS22045 PF03454 MoeA C-terminal region (domain IV) SWP_RS22045 PF00994 Probable molybdopterin binding domain SWP_RS22045 PF03453 MoeA N-terminal region (domain I and II) SWP_RS22050 PF04055 Radical SAM superfamily SWP_RS22050 PF06463 Molybdenum Cofactor Synthesis C SWP_RS22065 PF04055 Radical SAM superfamily SWP_RS22065 PF06463 Molybdenum Cofactor Synthesis C SWP_RS22075 PF03352 Methyladenine glycosylase SWP_RS22075 PF13302 Acetyltransferase (GNAT) domain SWP_RS22075 PF13673 Acetyltransferase (GNAT) domain SWP_RS22075 PF00958 GMP synthase C terminal domain SWP_RS22075 PF00117 Glutamine amidotransferase class-I SWP_RS22090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SWP_RS22090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SWP_RS22090 PF06827 Zinc finger found in FPG and IleRS SWP_RS22105 PF01467 Cytidylyltransferase-like SWP_RS22110 PF00849 RNA pseudouridylate synthase SWP_RS22115 PF00672 HAMP domain SWP_RS22115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS22115 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS22120 PF00486 Transcriptional regulatory protein, C terminal SWP_RS22120 PF00072 Response regulator receiver domain SWP_RS22130 PF04076 Bacterial OB fold (BOF) protein SWP_RS22135 PF12857 TOBE-like domain SWP_RS22135 PF00005 ABC transporter SWP_RS22140 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS22150 PF02391 MoaE protein SWP_RS22155 PF02597 ThiS family SWP_RS22160 PF01967 MoaC family SWP_RS22165 PF00994 Probable molybdopterin binding domain SWP_RS22170 PF04055 Radical SAM superfamily SWP_RS22170 PF06463 Molybdenum Cofactor Synthesis C SWP_RS22180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS22180 PF00672 HAMP domain SWP_RS22180 PF02743 Cache domain SWP_RS22190 PF03475 3-alpha domain SWP_RS22190 PF03473 MOSC domain SWP_RS22200 PF00990 Diguanylate cyclase, GGDEF domain SWP_RS22205 PF00294 pfkB family carbohydrate kinase SWP_RS22215 PF04055 Radical SAM superfamily SWP_RS22225 PF04055 Radical SAM superfamily SWP_RS22245 PF13247 4Fe-4S dicluster domain SWP_RS22250 PF01568 Molydopterin dinucleotide binding domain SWP_RS22250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS22250 PF00384 Molybdopterin oxidoreductase SWP_RS22265 PF13247 4Fe-4S dicluster domain SWP_RS22270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SWP_RS22270 PF01568 Molydopterin dinucleotide binding domain SWP_RS22270 PF00384 Molybdopterin oxidoreductase SWP_RS22280 PF02613 Nitrate reductase delta subunit SWP_RS22300 PF02634 FdhD/NarQ family SWP_RS22320 PF03748 Flagellar basal body-associated protein FliL SWP_RS22325 PF04345 Chorismate lyase SWP_RS22330 PF05547 Immune inhibitor A peptidase M6 SWP_RS22330 PF00801 PKD domain SWP_RS22335 PF01204 Trehalase SWP_RS22340 PF01914 MarC family integral membrane protein SWP_RS22360 PF01553 Acyltransferase SWP_RS22365 PF01810 LysE type translocator SWP_RS22370 PF03616 Sodium/glutamate symporter SWP_RS22375 PF01467 Cytidylyltransferase-like SWP_RS22375 PF00294 pfkB family carbohydrate kinase SWP_RS22380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SWP_RS22385 PF01370 NAD dependent epimerase/dehydratase family SWP_RS22390 PF01467 Cytidylyltransferase-like SWP_RS22395 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SWP_RS22415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SWP_RS22425 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SWP_RS22430 PF00440 Bacterial regulatory proteins, tetR family SWP_RS22430 PF08360 QacR-like protein, C-terminal region SWP_RS22435 PF01527 Transposase SWP_RS22440 PF00665 Integrase core domain SWP_RS22445 PF00155 Aminotransferase class I and II SWP_RS22450 PF08240 Alcohol dehydrogenase GroES-like domain SWP_RS22450 PF00107 Zinc-binding dehydrogenase SWP_RS22455 PF00581 Rhodanese-like domain SWP_RS22460 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SWP_RS22460 PF01694 Rhomboid family SWP_RS22475 PF01612 3'-5' exonuclease SWP_RS22475 PF00476 DNA polymerase family A SWP_RS22475 PF01367 5'-3' exonuclease, C-terminal SAM fold SWP_RS22475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SWP_RS22480 PF01926 50S ribosome-binding GTPase SWP_RS22485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SWP_RS22495 PF04220 Der GTPase activator (YihI) SWP_RS22505 PF06969 HemN C-terminal domain SWP_RS22505 PF04055 Radical SAM superfamily SWP_RS22515 PF12146 Serine aminopeptidase, S33 SWP_RS22520 PF00771 FHIPEP family SWP_RS22525 PF01312 FlhB HrpN YscU SpaS Family SWP_RS22530 PF01311 Bacterial export proteins, family 1 SWP_RS22535 PF01313 Bacterial export proteins, family 3 SWP_RS22540 PF00813 FliP family SWP_RS22545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SWP_RS22560 PF00158 Sigma-54 interaction domain SWP_RS22560 PF00072 Response regulator receiver domain SWP_RS22560 PF02954 Bacterial regulatory protein, Fis family SWP_RS22565 PF02049 Flagellar hook-basal body complex protein FliE SWP_RS22570 PF08345 Flagellar M-ring protein C-terminal SWP_RS22570 PF01514 Secretory protein of YscJ/FliF family SWP_RS22585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SWP_RS22585 PF18269 T3SS EscN ATPase C-terminal domain SWP_RS22600 PF08281 Sigma-70, region 4 SWP_RS22600 PF04542 Sigma-70 region 2 SWP_RS22630 PF00460 Flagella basal body rod protein SWP_RS22635 PF00460 Flagella basal body rod protein SWP_RS22635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS22640 PF13861 FlgD Tudor-like domain SWP_RS22640 PF03963 Flagellar hook capping protein - N-terminal region SWP_RS22640 PF13860 FlgD Ig-like domain SWP_RS22645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS22645 PF00460 Flagella basal body rod protein SWP_RS22645 PF07559 Flagellar basal body protein FlaE SWP_RS22650 PF00460 Flagella basal body rod protein SWP_RS22650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS22655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SWP_RS22655 PF00460 Flagella basal body rod protein SWP_RS22660 PF02107 Flagellar L-ring protein SWP_RS22665 PF02107 Flagellar L-ring protein SWP_RS22670 PF02119 Flagellar P-ring protein SWP_RS22675 PF10135 Rod binding protein SWP_RS22675 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SWP_RS22685 PF00669 Bacterial flagellin N-terminal helical region SWP_RS22700 PF00669 Bacterial flagellin N-terminal helical region SWP_RS22700 PF00700 Bacterial flagellin C-terminal helical region SWP_RS22705 PF07195 Flagellar hook-associated protein 2 C-terminus SWP_RS22705 PF07196 Flagellin hook IN motif SWP_RS22705 PF02465 Flagellar hook-associated protein 2 N-terminus SWP_RS22730 PF04542 Sigma-70 region 2 SWP_RS22730 PF04545 Sigma-70, region 4 SWP_RS22735 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS22740 PF13677 Membrane MotB of proton-channel complex MotA/MotB SWP_RS22740 PF00691 OmpA family SWP_RS22805 PF00378 Enoyl-CoA hydratase/isomerase SWP_RS22815 PF03471 Transporter associated domain SWP_RS22815 PF02080 TrkA-C domain SWP_RS22815 PF00999 Sodium/hydrogen exchanger family SWP_RS22820 PF12849 PBP superfamily domain SWP_RS22830 PF00528 Binding-protein-dependent transport system inner membrane component SWP_RS22835 PF00005 ABC transporter SWP_RS22850 PF00593 TonB dependent receptor SWP_RS22850 PF07715 TonB-dependent Receptor Plug Domain SWP_RS22855 PF01380 SIS domain SWP_RS22860 PF08220 DeoR-like helix-turn-helix domain SWP_RS22860 PF00455 DeoR C terminal sensor domain SWP_RS22865 PF07715 TonB-dependent Receptor Plug Domain SWP_RS22865 PF00593 TonB dependent receptor SWP_RS22870 PF14602 Hexapeptide repeat of succinyl-transferase SWP_RS22870 PF00132 Bacterial transferase hexapeptide (six repeats) SWP_RS22870 PF12804 MobA-like NTP transferase domain SWP_RS22880 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SWP_RS22880 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SWP_RS22885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SWP_RS22885 PF02874 ATP synthase alpha/beta family, beta-barrel domain SWP_RS22890 PF00231 ATP synthase SWP_RS22895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SWP_RS22895 PF02874 ATP synthase alpha/beta family, beta-barrel domain SWP_RS22895 PF00306 ATP synthase alpha/beta chain, C terminal domain SWP_RS22900 PF00213 ATP synthase delta (OSCP) subunit SWP_RS22905 PF00430 ATP synthase B/B' CF(0) SWP_RS22910 PF00137 ATP synthase subunit C SWP_RS22915 PF00119 ATP synthase A chain SWP_RS22920 PF03899 ATP synthase I chain SWP_RS22925 PF02195 ParB-like nuclease domain SWP_RS22925 PF17762 HTH domain found in ParB protein SWP_RS22930 PF13614 AAA domain SWP_RS22935 PF02527 rRNA small subunit methyltransferase G SWP_RS22940 PF13932 GidA associated domain SWP_RS22940 PF01134 Glucose inhibited division protein A SWP_RS22960 PF07963 Prokaryotic N-terminal methylation motif SWP_RS22975 PF12833 Helix-turn-helix domain SWP_RS22985 PF18496 Collagenase G catalytic helper subdomain SWP_RS22985 PF01752 Collagenase SWP_RS22985 PF08453 Peptidase family M9 N-terminal SWP_RS23005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SWP_RS23005 PF00512 His Kinase A (phospho-acceptor) domain SWP_RS23005 PF01627 Hpt domain SWP_RS23005 PF00672 HAMP domain SWP_RS23005 PF00072 Response regulator receiver domain SWP_RS23005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SWP_RS23015 PF01551 Peptidase family M23 SWP_RS23020 PF01551 Peptidase family M23 SWP_RS23050 PF08453 Peptidase family M9 N-terminal SWP_RS23050 PF01752 Collagenase SWP_RS23055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SWP_RS23055 PF00672 HAMP domain SWP_RS23090 PF02652 L-lactate permease SWP_RS23115 PF02655 ATP-grasp domain SWP_RS23115 PF00206 Lyase SWP_RS23120 PF00563 EAL domain SWP_RS23120 PF12792 CSS motif domain associated with EAL SWP_RS23135 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS23180 PF01447 Thermolysin metallopeptidase, catalytic domain SWP_RS23180 PF02868 Thermolysin metallopeptidase, alpha-helical domain SWP_RS23180 PF04151 Bacterial pre-peptidase C-terminal domain SWP_RS23180 PF07504 Fungalysin/Thermolysin Propeptide Motif SWP_RS23180 PF03413 Peptidase propeptide and YPEB domain SWP_RS23195 PF07963 Prokaryotic N-terminal methylation motif SWP_RS23210 PF03527 RHS protein SWP_RS23230 PF07963 Prokaryotic N-terminal methylation motif SWP_RS23235 PF04231 Endonuclease I SWP_RS23240 PF01618 MotA/TolQ/ExbB proton channel family SWP_RS23260 PF08173 Membrane bound YbgT-like protein