SWP_RS00050	SM00487	DEAD-like helicases superfamily
SWP_RS00050	SM00490	helicase superfamily c-terminal domain
SWP_RS00050	SM00847	Helicase associated domain (HA2)  Add an annotation
SWP_RS00075	SM00382	ATPases associated with a variety of cellular activities
SWP_RS00075	SM00760	Bacterial dnaA protein helix-turn-helix domain
SWP_RS00080	SM00480	DNA polymerase III beta subunit
SWP_RS00090	SM00387	Histidine kinase-like ATPases
SWP_RS00090	SM00433	TopoisomeraseII
SWP_RS00100	SM00836	DALR anticodon binding domain
SWP_RS00175	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS00200	SM00823	Phosphopantetheine attachment site
SWP_RS00200	SM01294	SWP_RS00200
SWP_RS00245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS00280	SM00257	Lysin motif
SWP_RS00370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS00370	SM00245	tail specific protease
SWP_RS00385	SM00450	Rhodanese Homology Domain
SWP_RS00440	SM00422	helix_turn_helix, mercury resistance
SWP_RS00455	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS00460	SM00267	diguanylate cyclase
SWP_RS00485	SM00852	Probable molybdopterin binding domain
SWP_RS00495	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS00510	SM00382	ATPases associated with a variety of cellular activities
SWP_RS00520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS00525	SM00382	ATPases associated with a variety of cellular activities
SWP_RS00600	SM00382	ATPases associated with a variety of cellular activities
SWP_RS00615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS00615	SM00866	SWP_RS00615
SWP_RS00655	SM00422	helix_turn_helix, mercury resistance
SWP_RS00690	SM00905	Dihydroneopterin aldolase
SWP_RS00740	SM00267	diguanylate cyclase
SWP_RS00785	SM00852	Probable molybdopterin binding domain
SWP_RS00795	SM00052	Putative diguanylate phosphodiesterase
SWP_RS00795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS00795	SM00091	PAS domain
SWP_RS00795	SM00267	diguanylate cyclase
SWP_RS00845	SM00631	SWP_RS00845
SWP_RS00850	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS00855	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS00875	SM00363	S4 RNA-binding domain
SWP_RS00890	SM00382	ATPases associated with a variety of cellular activities
SWP_RS00960	SM00450	Rhodanese Homology Domain
SWP_RS00990	SM00360	RNA recognition motif
SWP_RS01035	SM00829	Enoylreductase
SWP_RS01085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS01115	SM01118	SWP_RS01115
SWP_RS01135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS01135	SM00387	Histidine kinase-like ATPases
SWP_RS01135	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS01140	SM00448	cheY-homologous receiver domain
SWP_RS01140	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS01165	SM00382	ATPases associated with a variety of cellular activities
SWP_RS01165	SM00448	cheY-homologous receiver domain
SWP_RS01170	SM00387	Histidine kinase-like ATPases
SWP_RS01170	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS01210	SM00344	helix_turn_helix ASNC type
SWP_RS01235	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS01255	SM01230	SWP_RS01255
SWP_RS01260	SM00838	Elongation factor G C-terminus
SWP_RS01330	SM00450	Rhodanese Homology Domain
SWP_RS01335	SM00825	Beta-ketoacyl synthase
SWP_RS01350	SM00825	Beta-ketoacyl synthase
SWP_RS01415	SM00563	Phosphate acyltransferases
SWP_RS01430	SM00487	DEAD-like helicases superfamily
SWP_RS01430	SM00490	helicase superfamily c-terminal domain
SWP_RS01435	SM00421	helix_turn_helix, Lux Regulon
SWP_RS01435	SM00448	cheY-homologous receiver domain
SWP_RS01470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS01470	SM00954	Region found in RelA / SpoT proteins
SWP_RS01475	SM01409	SWP_RS01475
SWP_RS01480	SM00072	Guanylate kinase homologues.
SWP_RS01555	SM00563	Phosphate acyltransferases
SWP_RS01560	SM00563	Phosphate acyltransferases
SWP_RS01565	SM00382	ATPases associated with a variety of cellular activities
SWP_RS01695	SM00344	helix_turn_helix ASNC type
SWP_RS01700	SM00014	Acid phosphatase homologues
SWP_RS01735	SM00052	Putative diguanylate phosphodiesterase
SWP_RS01735	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS01735	SM00267	diguanylate cyclase
SWP_RS01770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS01770	SM00387	Histidine kinase-like ATPases
SWP_RS01770	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS01775	SM00448	cheY-homologous receiver domain
SWP_RS01775	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS01790	SM00052	Putative diguanylate phosphodiesterase
SWP_RS01790	SM00267	diguanylate cyclase
SWP_RS01790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS01815	SM00382	ATPases associated with a variety of cellular activities
SWP_RS01820	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS01825	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS01860	SM01219	SWP_RS01860
SWP_RS01945	SM01230	SWP_RS01945
SWP_RS01990	SM00357	Cold shock protein domain
SWP_RS01990	SM00382	ATPases associated with a variety of cellular activities
SWP_RS01990	SM00959	Rho termination factor, N-terminal domain
SWP_RS02000	SM00487	DEAD-like helicases superfamily
SWP_RS02000	SM00490	helicase superfamily c-terminal domain
SWP_RS02025	SM01004	Delta-aminolevulinic acid dehydratase
SWP_RS02030	SM00267	diguanylate cyclase
SWP_RS02095	SM00014	Acid phosphatase homologues
SWP_RS02125	SM00382	ATPases associated with a variety of cellular activities
SWP_RS02125	SM01086	C-terminal, D2-small domain, of ClpB protein
SWP_RS02145	SM00248	ankyrin repeats
SWP_RS02150	SM00248	ankyrin repeats
SWP_RS02190	SM00836	DALR anticodon binding domain
SWP_RS02190	SM01016	Arginyl tRNA synthetase N terminal dom
SWP_RS02195	SM00487	DEAD-like helicases superfamily
SWP_RS02195	SM00490	helicase superfamily c-terminal domain
SWP_RS02215	SM00919	Malic enzyme, NAD binding domain
SWP_RS02215	SM01274	SWP_RS02215
SWP_RS02220	SM00052	Putative diguanylate phosphodiesterase
SWP_RS02220	SM00267	diguanylate cyclase
SWP_RS02245	SM00965	Secretin and TonB N terminus short domain
SWP_RS02250	SM00382	ATPases associated with a variety of cellular activities
SWP_RS02255	SM00028	Tetratricopeptide repeats
SWP_RS02335	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS02395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS02405	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SWP_RS02435	SM00411	bacterial (prokaryotic) histone like domain
SWP_RS02440	SM00448	cheY-homologous receiver domain
SWP_RS02470	SM00052	Putative diguanylate phosphodiesterase
SWP_RS02470	SM00267	diguanylate cyclase
SWP_RS02525	SM00563	Phosphate acyltransferases
SWP_RS02535	SM00267	diguanylate cyclase
SWP_RS02540	SM00448	cheY-homologous receiver domain
SWP_RS02560	SM00487	DEAD-like helicases superfamily
SWP_RS02560	SM00490	helicase superfamily c-terminal domain
SWP_RS02565	SM00382	ATPases associated with a variety of cellular activities
SWP_RS02565	SM00670	Large family of predicted nucleotide-binding domains
SWP_RS02570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS02570	SM00091	PAS domain
SWP_RS02570	SM00387	Histidine kinase-like ATPases
SWP_RS02570	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS02570	SM00448	cheY-homologous receiver domain
SWP_RS02625	SM00883	Chaperonin 10 Kd subunit
SWP_RS02655	SM00014	Acid phosphatase homologues
SWP_RS02765	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS02785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS02830	SM00267	diguanylate cyclase
SWP_RS02845	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS02860	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS02860	SM00495	Chitin-binding domain type 3
SWP_RS02860	SM00636	SWP_RS02860
SWP_RS02900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS02915	SM00387	Histidine kinase-like ATPases
SWP_RS02915	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS02920	SM00448	cheY-homologous receiver domain
SWP_RS02920	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS02970	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS02970	SM00924	MgtE intracellular N domain
SWP_RS03000	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03020	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS03030	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03065	SM00387	Histidine kinase-like ATPases
SWP_RS03065	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS03070	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS03070	SM00448	cheY-homologous receiver domain
SWP_RS03080	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS03085	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS03115	SM00788	Adenylosuccinate synthetase
SWP_RS03120	SM00671	Sel1-like repeats.
SWP_RS03125	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS03125	SM00357	Cold shock protein domain
SWP_RS03125	SM00955	SWP_RS03125
SWP_RS03130	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SWP_RS03175	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03180	SM01005	Alanine racemase, C-terminal domain
SWP_RS03205	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS03270	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03285	SM00487	DEAD-like helicases superfamily
SWP_RS03285	SM00490	helicase superfamily c-terminal domain
SWP_RS03310	SM01150	SWP_RS03310
SWP_RS03315	SM00387	Histidine kinase-like ATPases
SWP_RS03320	SM00448	cheY-homologous receiver domain
SWP_RS03320	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS03330	SM00100	Cyclic nucleotide-monophosphate binding domain
SWP_RS03330	SM00419	helix_turn_helix, cAMP Regulatory protein
SWP_RS03335	SM00671	Sel1-like repeats.
SWP_RS03390	SM00387	Histidine kinase-like ATPases
SWP_RS03390	SM00433	TopoisomeraseII
SWP_RS03400	SM00434	DNA Topoisomerase IV
SWP_RS03445	SM00479	SWP_RS03445
SWP_RS03485	SM00257	Lysin motif
SWP_RS03485	SM00646	SWP_RS03485
SWP_RS03490	SM00853	MutL C terminal dimerisation domain
SWP_RS03490	SM01340	SWP_RS03490
SWP_RS03510	SM00244	prohibitin homologues
SWP_RS03515	SM00244	prohibitin homologues
SWP_RS03555	SM00487	DEAD-like helicases superfamily
SWP_RS03555	SM00490	helicase superfamily c-terminal domain
SWP_RS03570	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03575	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS03580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS03590	SM00287	Bacterial SH3 domain homologues
SWP_RS03605	SM01118	SWP_RS03605
SWP_RS03695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS03695	SM00382	ATPases associated with a variety of cellular activities
SWP_RS03775	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SWP_RS03775	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SWP_RS03890	SM00387	Histidine kinase-like ATPases
SWP_RS03890	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS03895	SM00448	cheY-homologous receiver domain
SWP_RS03895	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS03955	SM00363	S4 RNA-binding domain
SWP_RS04225	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS04285	SM00704	CDGSH-type zinc finger. Function unknown.
SWP_RS04305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS04320	SM00829	Enoylreductase
SWP_RS04360	SM01018	B12 binding domain
SWP_RS04370	SM00382	ATPases associated with a variety of cellular activities
SWP_RS04420	SM00487	DEAD-like helicases superfamily
SWP_RS04430	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS04475	SM00382	ATPases associated with a variety of cellular activities
SWP_RS04560	SM00382	ATPases associated with a variety of cellular activities
SWP_RS04595	SM00382	ATPases associated with a variety of cellular activities
SWP_RS04610	SM00382	ATPases associated with a variety of cellular activities
SWP_RS04610	SM00448	cheY-homologous receiver domain
SWP_RS04615	SM00387	Histidine kinase-like ATPases
SWP_RS04685	SM00849	Metallo-beta-lactamase superfamily
SWP_RS04690	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS04705	SM00448	cheY-homologous receiver domain
SWP_RS04705	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS04715	SM00387	Histidine kinase-like ATPases
SWP_RS04715	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS04715	SM00448	cheY-homologous receiver domain
SWP_RS04730	SM00357	Cold shock protein domain
SWP_RS04740	SM00849	Metallo-beta-lactamase superfamily
SWP_RS04785	SM00052	Putative diguanylate phosphodiesterase
SWP_RS04785	SM00448	cheY-homologous receiver domain
SWP_RS04795	SM00387	Histidine kinase-like ATPases
SWP_RS04795	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS04855	SM00244	prohibitin homologues
SWP_RS04895	SM00400	zinc finger
SWP_RS04895	SM00493	SWP_RS04895
SWP_RS04895	SM00766	DNA primase DnaG DnaB-binding
SWP_RS04915	SM01207	SWP_RS04915
SWP_RS04920	SM00905	Dihydroneopterin aldolase
SWP_RS04940	SM00257	Lysin motif
SWP_RS04955	SM00382	ATPases associated with a variety of cellular activities
SWP_RS05050	SM00014	Acid phosphatase homologues
SWP_RS05110	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS05155	SM00900	SWP_RS05155
SWP_RS05200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS05200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS05235	SM00860	SMI1 / KNR4 family
SWP_RS05250	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SWP_RS05275	SM00271	DnaJ molecular chaperone homology domain
SWP_RS05295	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SWP_RS05300	SM00851	MGS-like domain
SWP_RS05300	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SWP_RS05325	SM01103	SWP_RS05325
SWP_RS05335	SM00382	ATPases associated with a variety of cellular activities
SWP_RS05375	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS05395	SM01387	SWP_RS05395
SWP_RS05400	SM00052	Putative diguanylate phosphodiesterase
SWP_RS05400	SM00267	diguanylate cyclase
SWP_RS05405	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS05405	SM00322	K homology RNA-binding domain
SWP_RS05410	SM00028	Tetratricopeptide repeats
SWP_RS05435	SM01133	SWP_RS05435
SWP_RS05440	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SWP_RS05470	SM00421	helix_turn_helix, Lux Regulon
SWP_RS05470	SM00448	cheY-homologous receiver domain
SWP_RS05475	SM00387	Histidine kinase-like ATPases
SWP_RS05475	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS05480	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS05520	SM00487	DEAD-like helicases superfamily
SWP_RS05520	SM00490	helicase superfamily c-terminal domain
SWP_RS05565	SM00563	Phosphate acyltransferases
SWP_RS05580	SM00091	PAS domain
SWP_RS05580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS05615	SM00448	cheY-homologous receiver domain
SWP_RS05615	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS05620	SM00091	PAS domain
SWP_RS05620	SM00387	Histidine kinase-like ATPases
SWP_RS05620	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS05635	SM01263	SWP_RS05635
SWP_RS05655	SM00267	diguanylate cyclase
SWP_RS05720	SM00098	Alkaline phosphatase homologues
SWP_RS05725	SM00098	Alkaline phosphatase homologues
SWP_RS05760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS05805	SM00642	Alpha-amylase domain
SWP_RS05810	SM00642	Alpha-amylase domain
SWP_RS05895	SM00382	ATPases associated with a variety of cellular activities
SWP_RS05970	SM00073	Histidine Phosphotransfer domain
SWP_RS05970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS05970	SM00387	Histidine kinase-like ATPases
SWP_RS05970	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS05970	SM00448	cheY-homologous receiver domain
SWP_RS05980	SM00954	Region found in RelA / SpoT proteins
SWP_RS05995	SM01192	SWP_RS05995
SWP_RS05995	SM01193	SWP_RS05995
SWP_RS06030	SM00257	Lysin motif
SWP_RS06040	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SWP_RS06040	SM00534	ATPase domain of DNA mismatch repair MUTS family
SWP_RS06045	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SWP_RS06115	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS06145	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS06195	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS06195	SM00267	diguanylate cyclase
SWP_RS06200	SM01001	AIR carboxylase
SWP_RS06220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS06220	SM00245	tail specific protease
SWP_RS06240	SM00448	cheY-homologous receiver domain
SWP_RS06240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS06270	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS06280	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS06420	SM00028	Tetratricopeptide repeats
SWP_RS06445	SM00564	beta-propeller repeat
SWP_RS06465	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS06495	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS06495	SM01240	SWP_RS06495
SWP_RS06510	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS06515	SM01211	SWP_RS06515
SWP_RS06535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS06535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS06570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS06640	SM00858	SWP_RS06640
SWP_RS06645	SM00260	Two component signalling adaptor domain
SWP_RS06645	SM00448	cheY-homologous receiver domain
SWP_RS06650	SM00138	Methyltransferase, chemotaxis proteins 
SWP_RS06695	SM00047	Lysozyme subfamily 2
SWP_RS06740	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06745	SM00091	PAS domain
SWP_RS06745	SM00387	Histidine kinase-like ATPases
SWP_RS06745	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS06750	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06750	SM00448	cheY-homologous receiver domain
SWP_RS06775	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06835	SM00382	ATPases associated with a variety of cellular activities
SWP_RS06835	SM00962	SRP54-type protein, GTPase domain
SWP_RS06850	SM00448	cheY-homologous receiver domain
SWP_RS06860	SM00073	Histidine Phosphotransfer domain
SWP_RS06860	SM00260	Two component signalling adaptor domain
SWP_RS06860	SM00387	Histidine kinase-like ATPases
SWP_RS06860	SM01231	SWP_RS06860
SWP_RS06865	SM00448	cheY-homologous receiver domain
SWP_RS06880	SM00260	Two component signalling adaptor domain
SWP_RS06885	SM00260	Two component signalling adaptor domain
SWP_RS06920	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SWP_RS07000	SM00226	Low molecular weight phosphatase family
SWP_RS07010	SM00984	UDP binding domain
SWP_RS07105	SM01321	SWP_RS07105
SWP_RS07110	SM01027	Beta-Casp domain
SWP_RS07175	SM00331	Sigma factor PP2C-like phosphatases
SWP_RS07175	SM00448	cheY-homologous receiver domain
SWP_RS07185	SM00073	Histidine Phosphotransfer domain
SWP_RS07185	SM00091	PAS domain
SWP_RS07185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS07185	SM00387	Histidine kinase-like ATPases
SWP_RS07185	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS07185	SM00448	cheY-homologous receiver domain
SWP_RS07190	SM00382	ATPases associated with a variety of cellular activities
SWP_RS07190	SM00448	cheY-homologous receiver domain
SWP_RS07195	SM00481	DNA polymerase alpha chain like domain
SWP_RS07210	SM01217	SWP_RS07210
SWP_RS07225	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SWP_RS07245	SM00354	helix_turn _helix lactose operon repressor
SWP_RS07325	SM00091	PAS domain
SWP_RS07325	SM00382	ATPases associated with a variety of cellular activities
SWP_RS07420	SM00382	ATPases associated with a variety of cellular activities
SWP_RS07425	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS07425	SM01009	AlkA N-terminal domain
SWP_RS07435	SM00487	DEAD-like helicases superfamily
SWP_RS07435	SM00490	helicase superfamily c-terminal domain
SWP_RS07445	SM00155	Phospholipase D. Active site motifs.
SWP_RS07450	SM00260	Two component signalling adaptor domain
SWP_RS07450	SM00448	cheY-homologous receiver domain
SWP_RS07490	SM01323	SWP_RS07490
SWP_RS07510	SM00450	Rhodanese Homology Domain
SWP_RS07520	SM01322	SWP_RS07520
SWP_RS07570	SM00271	DnaJ molecular chaperone homology domain
SWP_RS07590	SM00562	SWP_RS07590
SWP_RS07635	SM00382	ATPases associated with a variety of cellular activities
SWP_RS07650	SM00421	helix_turn_helix, Lux Regulon
SWP_RS07650	SM00448	cheY-homologous receiver domain
SWP_RS07655	SM00387	Histidine kinase-like ATPases
SWP_RS07680	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS07685	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS07700	SM00493	SWP_RS07700
SWP_RS07705	SM00387	Histidine kinase-like ATPases
SWP_RS07730	SM01266	SWP_RS07730
SWP_RS07740	SM00634	Bacterial Ig-like domain (group 1)
SWP_RS07750	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SWP_RS07750	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SWP_RS07750	SM00493	SWP_RS07750
SWP_RS07775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS07775	SM01358	SWP_RS07775
SWP_RS07800	SM00487	DEAD-like helicases superfamily
SWP_RS07800	SM00490	helicase superfamily c-terminal domain
SWP_RS07800	SM00982	SWP_RS07800
SWP_RS07800	SM01058	CarD-like/TRCF domain
SWP_RS07815	SM00382	ATPases associated with a variety of cellular activities
SWP_RS07885	SM01022	SWP_RS07885
SWP_RS07930	SM00938	Nitrogen regulatory protein P-II
SWP_RS07935	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS08025	SM00387	Histidine kinase-like ATPases
SWP_RS08025	SM01049	SWP_RS08025
SWP_RS08030	SM00421	helix_turn_helix, Lux Regulon
SWP_RS08030	SM00448	cheY-homologous receiver domain
SWP_RS08075	SM00479	SWP_RS08075
SWP_RS08150	SM00487	DEAD-like helicases superfamily
SWP_RS08150	SM00490	helicase superfamily c-terminal domain
SWP_RS08160	SM00996	S-adenosyl-L-homocysteine hydrolase
SWP_RS08160	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SWP_RS08170	SM00387	Histidine kinase-like ATPases
SWP_RS08170	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS08170	SM00448	cheY-homologous receiver domain
SWP_RS08185	SM00421	helix_turn_helix, Lux Regulon
SWP_RS08185	SM00448	cheY-homologous receiver domain
SWP_RS08225	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS08240	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SWP_RS08255	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SWP_RS08290	SM00357	Cold shock protein domain
SWP_RS08300	SM00382	ATPases associated with a variety of cellular activities
SWP_RS08300	SM01086	C-terminal, D2-small domain, of ClpB protein
SWP_RS08305	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS08325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS08350	SM00450	Rhodanese Homology Domain
SWP_RS08355	SM00244	prohibitin homologues
SWP_RS08395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS08405	SM00052	Putative diguanylate phosphodiesterase
SWP_RS08405	SM00267	diguanylate cyclase
SWP_RS08405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS08440	SM01130	SWP_RS08440
SWP_RS08520	SM00481	DNA polymerase alpha chain like domain
SWP_RS08540	SM00363	S4 RNA-binding domain
SWP_RS08560	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS08570	SM00710	Parallel beta-helix repeats
SWP_RS08585	SM00382	ATPases associated with a variety of cellular activities
SWP_RS08645	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS08690	SM00267	diguanylate cyclase
SWP_RS08690	SM00448	cheY-homologous receiver domain
SWP_RS08710	SM00771	ZipA, C-terminal domain (FtsZ-binding)
SWP_RS08715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SWP_RS08715	SM00292	breast cancer carboxy-terminal domain
SWP_RS08715	SM00532	Ligase N family
SWP_RS08750	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS08755	SM00479	SWP_RS08755
SWP_RS08760	SM00387	Histidine kinase-like ATPases
SWP_RS08760	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS08760	SM00448	cheY-homologous receiver domain
SWP_RS08780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS08780	SM00895	SWP_RS08780
SWP_RS08810	SM01011	Aminopeptidase P, N-terminal domain
SWP_RS08845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS08890	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SWP_RS08890	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SWP_RS08895	SM00649	Ribosomal protein L11/L12
SWP_RS08920	SM00663	RNA polymerase I subunit A N-terminus
SWP_RS08935	SM00838	Elongation factor G C-terminus
SWP_RS08935	SM00889	Elongation factor G, domain IV
SWP_RS08965	SM01382	SWP_RS08965
SWP_RS08965	SM01383	SWP_RS08965
SWP_RS08980	SM00322	K homology RNA-binding domain
SWP_RS09000	SM01374	SWP_RS09000
SWP_RS09065	SM00363	S4 RNA-binding domain
SWP_RS09065	SM01390	SWP_RS09065
SWP_RS09070	SM00662	RNA polymerases D
SWP_RS09100	SM00382	ATPases associated with a variety of cellular activities
SWP_RS09150	SM00852	Probable molybdopterin binding domain
SWP_RS09170	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SWP_RS09200	SM00842	Cell division protein FtsA
SWP_RS09220	SM00965	Secretin and TonB N terminus short domain
SWP_RS09280	SM00749	bacterial OsmY and nodulation domain
SWP_RS09345	SM00829	Enoylreductase
SWP_RS09355	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS09355	SM00871	Bacterial transcription activator, effector binding domain
SWP_RS09370	SM00382	ATPases associated with a variety of cellular activities
SWP_RS09405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SWP_RS09430	SM00631	SWP_RS09430
SWP_RS09440	SM00854	Bacterial capsule synthesis protein PGA_cap
SWP_RS09475	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS09495	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS09535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS09535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS09560	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS09575	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS09600	SM00387	Histidine kinase-like ATPases
SWP_RS09600	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS09600	SM00448	cheY-homologous receiver domain
SWP_RS09680	SM00331	Sigma factor PP2C-like phosphatases
SWP_RS09680	SM00448	cheY-homologous receiver domain
SWP_RS09740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS09750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS09755	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS09880	SM00341	Helicase and RNase D C-terminal
SWP_RS09880	SM00487	DEAD-like helicases superfamily
SWP_RS09880	SM00490	helicase superfamily c-terminal domain
SWP_RS09880	SM00956	SWP_RS09880
SWP_RS09890	SM00917	LeuA allosteric (dimerisation) domain
SWP_RS09895	SM01329	SWP_RS09895
SWP_RS09990	SM00842	Cell division protein FtsA
SWP_RS09995	SM00864	Tubulin/FtsZ family, GTPase domain
SWP_RS09995	SM00865	Tubulin/FtsZ family, C-terminal domain
SWP_RS10015	SM00957	SecA DEAD-like domain
SWP_RS10015	SM00958	SecA preprotein cross-linking domain
SWP_RS10055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS10060	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SWP_RS10065	SM00387	Histidine kinase-like ATPases
SWP_RS10070	SM00448	cheY-homologous receiver domain
SWP_RS10070	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS10080	SM00382	ATPases associated with a variety of cellular activities
SWP_RS10100	SM00387	Histidine kinase-like ATPases
SWP_RS10105	SM00382	ATPases associated with a variety of cellular activities
SWP_RS10105	SM00448	cheY-homologous receiver domain
SWP_RS10115	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS10135	SM00267	diguanylate cyclase
SWP_RS10180	SM00849	Metallo-beta-lactamase superfamily
SWP_RS10185	SM00382	ATPases associated with a variety of cellular activities
SWP_RS10195	SM00849	Metallo-beta-lactamase superfamily
SWP_RS10240	SM00341	Helicase and RNase D C-terminal
SWP_RS10240	SM00474	3'-5' exonuclease
SWP_RS10275	SM00257	Lysin motif
SWP_RS10280	SM00849	Metallo-beta-lactamase superfamily
SWP_RS10300	SM00479	SWP_RS10300
SWP_RS10325	SM00422	helix_turn_helix, mercury resistance
SWP_RS10355	SM00448	cheY-homologous receiver domain
SWP_RS10355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS10360	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS10360	SM00073	Histidine Phosphotransfer domain
SWP_RS10360	SM00091	PAS domain
SWP_RS10360	SM00387	Histidine kinase-like ATPases
SWP_RS10360	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS10360	SM00448	cheY-homologous receiver domain
SWP_RS10400	SM00481	DNA polymerase alpha chain like domain
SWP_RS10405	SM01144	SWP_RS10405
SWP_RS10450	SM00876	Biotin and Thiamin Synthesis associated domain
SWP_RS10460	SM00448	cheY-homologous receiver domain
SWP_RS10510	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS10510	SM00267	diguanylate cyclase
SWP_RS10530	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SWP_RS10535	SM00382	ATPases associated with a variety of cellular activities
SWP_RS10575	SM00478	endonuclease III
SWP_RS10575	SM00525	SWP_RS10575
SWP_RS10585	SM00900	SWP_RS10585
SWP_RS10610	SM00052	Putative diguanylate phosphodiesterase
SWP_RS10610	SM00267	diguanylate cyclase
SWP_RS10640	SM00487	DEAD-like helicases superfamily
SWP_RS10640	SM00490	helicase superfamily c-terminal domain
SWP_RS10690	SM00052	Putative diguanylate phosphodiesterase
SWP_RS10690	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS10690	SM00267	diguanylate cyclase
SWP_RS10705	SM00463	Small MutS-related domain
SWP_RS10765	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS10775	SM00267	diguanylate cyclase
SWP_RS10780	SM00881	CoA binding domain
SWP_RS10800	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS10805	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS10845	SM00028	Tetratricopeptide repeats
SWP_RS10850	SM00421	helix_turn_helix, Lux Regulon
SWP_RS10850	SM00448	cheY-homologous receiver domain
SWP_RS10855	SM00387	Histidine kinase-like ATPases
SWP_RS10910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS10910	SM00895	SWP_RS10910
SWP_RS10985	SM00382	ATPases associated with a variety of cellular activities
SWP_RS11000	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS11090	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SWP_RS11115	SM00631	SWP_RS11115
SWP_RS11130	SM00870	SWP_RS11130
SWP_RS11180	SM00434	DNA Topoisomerase IV
SWP_RS11210	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS11215	SM00411	bacterial (prokaryotic) histone like domain
SWP_RS11230	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SWP_RS11275	SM00155	Phospholipase D. Active site motifs.
SWP_RS11280	SM01144	SWP_RS11280
SWP_RS11300	SM00448	cheY-homologous receiver domain
SWP_RS11305	SM00387	Histidine kinase-like ATPases
SWP_RS11305	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS11315	SM00900	SWP_RS11315
SWP_RS11355	SM00587	ZnF_C4 abd HLH domain containing kinases domain
SWP_RS11400	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SWP_RS11485	SM01131	SWP_RS11485
SWP_RS11510	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS11535	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS11625	SM00100	Cyclic nucleotide-monophosphate binding domain
SWP_RS11625	SM00419	helix_turn_helix, cAMP Regulatory protein
SWP_RS11670	SM00382	ATPases associated with a variety of cellular activities
SWP_RS11680	SM00843	SWP_RS11680
SWP_RS11685	SM00344	helix_turn_helix ASNC type
SWP_RS11690	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SWP_RS11690	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SWP_RS11695	SM00448	cheY-homologous receiver domain
SWP_RS11695	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS11705	SM00487	DEAD-like helicases superfamily
SWP_RS11705	SM00490	helicase superfamily c-terminal domain
SWP_RS11715	SM00155	Phospholipase D. Active site motifs.
SWP_RS11730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS11745	SM00861	Transketolase, pyrimidine binding domain
SWP_RS11800	SM00841	Elongation factor P, C-terminal
SWP_RS11800	SM01185	SWP_RS11800
SWP_RS11810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS11940	SM00028	Tetratricopeptide repeats
SWP_RS11955	SM00382	ATPases associated with a variety of cellular activities
SWP_RS11975	SM00858	SWP_RS11975
SWP_RS11980	SM00382	ATPases associated with a variety of cellular activities
SWP_RS12035	SM00642	Alpha-amylase domain
SWP_RS12045	SM00642	Alpha-amylase domain
SWP_RS12050	SM00642	Alpha-amylase domain
SWP_RS12065	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS12105	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SWP_RS12110	SM00479	SWP_RS12110
SWP_RS12120	SM00354	helix_turn _helix lactose operon repressor
SWP_RS12130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS12130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS12130	SM01049	SWP_RS12130
SWP_RS12175	SM00947	Carbonic anhydrase
SWP_RS12325	SM01130	SWP_RS12325
SWP_RS12360	SM00028	Tetratricopeptide repeats
SWP_RS12445	SM00052	Putative diguanylate phosphodiesterase
SWP_RS12460	SM00460	Transglutaminase/protease-like homologues
SWP_RS12475	SM00382	ATPases associated with a variety of cellular activities
SWP_RS12495	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS12505	SM00382	ATPases associated with a variety of cellular activities
SWP_RS12505	SM00487	DEAD-like helicases superfamily
SWP_RS12505	SM00490	helicase superfamily c-terminal domain
SWP_RS12505	SM00847	Helicase associated domain (HA2)  Add an annotation
SWP_RS12510	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS12540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS12555	SM00763	PrkA AAA domain
SWP_RS12610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SWP_RS12610	SM00465	GIY-YIG type nucleases (URI domain)
SWP_RS12645	SM00382	ATPases associated with a variety of cellular activities
SWP_RS12655	SM00981	SWP_RS12655
SWP_RS12705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS12705	SM00245	tail specific protease
SWP_RS12710	SM00945	ProQ/FINO family
SWP_RS12870	SM00260	Two component signalling adaptor domain
SWP_RS12870	SM00448	cheY-homologous receiver domain
SWP_RS12980	SM00900	SWP_RS12980
SWP_RS13020	SM00382	ATPases associated with a variety of cellular activities
SWP_RS13095	SM00421	helix_turn_helix, Lux Regulon
SWP_RS13100	SM00028	Tetratricopeptide repeats
SWP_RS13105	SM00220	Serine/Threonine protein kinases, catalytic domain
SWP_RS13105	SM00331	Sigma factor PP2C-like phosphatases
SWP_RS13105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SWP_RS13130	SM01012	SWP_RS13130
SWP_RS13145	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS13175	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS13175	SM00876	Biotin and Thiamin Synthesis associated domain
SWP_RS13195	SM00838	Elongation factor G C-terminus
SWP_RS13195	SM00889	Elongation factor G, domain IV
SWP_RS13240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS13240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS13245	SM00881	CoA binding domain
SWP_RS13260	SM00861	Transketolase, pyrimidine binding domain
SWP_RS13295	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS13305	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS13355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS13355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS13410	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS13450	SM00487	DEAD-like helicases superfamily
SWP_RS13450	SM00491	SWP_RS13450
SWP_RS13510	SM00411	bacterial (prokaryotic) histone like domain
SWP_RS13515	SM00873	B3/4 domain
SWP_RS13515	SM00874	tRNA synthetase B5 domain
SWP_RS13515	SM00896	Ferredoxin-fold anticodon binding domain
SWP_RS13525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS13550	SM00867	YceI-like domain 
SWP_RS13590	SM00382	ATPases associated with a variety of cellular activities
SWP_RS13595	SM00357	Cold shock protein domain
SWP_RS13635	SM00825	Beta-ketoacyl synthase
SWP_RS13645	SM00822	SWP_RS13645
SWP_RS13650	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SWP_RS13690	SM00363	S4 RNA-binding domain
SWP_RS13695	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS13760	SM00448	cheY-homologous receiver domain
SWP_RS13760	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS13765	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS13825	SM00267	diguanylate cyclase
SWP_RS13835	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS13835	SM00609	Vault protein Inter-alpha-Trypsin domain
SWP_RS13845	SM00448	cheY-homologous receiver domain
SWP_RS13845	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS13850	SM00387	Histidine kinase-like ATPases
SWP_RS13850	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS13860	SM00849	Metallo-beta-lactamase superfamily
SWP_RS13915	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SWP_RS13915	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SWP_RS13915	SM00493	SWP_RS13915
SWP_RS13955	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SWP_RS13970	SM00825	Beta-ketoacyl synthase
SWP_RS14015	SM00463	Small MutS-related domain
SWP_RS14030	SM00052	Putative diguanylate phosphodiesterase
SWP_RS14030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS14030	SM00091	PAS domain
SWP_RS14030	SM00267	diguanylate cyclase
SWP_RS14070	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS14075	SM00028	Tetratricopeptide repeats
SWP_RS14075	SM00327	von Willebrand factor (vWF) type A domain
SWP_RS14125	SM00450	Rhodanese Homology Domain
SWP_RS14170	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS14175	SM00829	Enoylreductase
SWP_RS14185	SM00487	DEAD-like helicases superfamily
SWP_RS14185	SM00490	helicase superfamily c-terminal domain
SWP_RS14230	SM00448	cheY-homologous receiver domain
SWP_RS14230	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS14235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS14235	SM00387	Histidine kinase-like ATPases
SWP_RS14335	SM00267	diguanylate cyclase
SWP_RS14340	SM00028	Tetratricopeptide repeats
SWP_RS14375	SM00486	DNA polymerase type-B family
SWP_RS14380	SM00491	SWP_RS14380
SWP_RS14430	SM00857	Resolvase, N terminal domain
SWP_RS14510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SWP_RS14550	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14575	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14590	SM00411	bacterial (prokaryotic) histone like domain
SWP_RS14595	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14595	SM00464	Found in ATP-dependent protease La (LON)
SWP_RS14600	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14600	SM00994	ClpX C4-type zinc finger
SWP_RS14600	SM01086	C-terminal, D2-small domain, of ClpB protein
SWP_RS14635	SM00840	SWP_RS14635
SWP_RS14670	SM00899	SWP_RS14670
SWP_RS14730	SM00986	Uracil DNA glycosylase superfamily
SWP_RS14730	SM00987	UreE urease accessory protein, C-terminal domain 
SWP_RS14750	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS14855	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS14870	SM00100	Cyclic nucleotide-monophosphate binding domain
SWP_RS14870	SM00116	Domain in cystathionine beta-synthase and other proteins.
SWP_RS14875	SM00479	SWP_RS14875
SWP_RS14915	SM00091	PAS domain
SWP_RS14915	SM00387	Histidine kinase-like ATPases
SWP_RS14915	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS14920	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14920	SM00448	cheY-homologous receiver domain
SWP_RS14930	SM00382	ATPases associated with a variety of cellular activities
SWP_RS14980	SM00507	HNH nucleases
SWP_RS14995	SM00382	ATPases associated with a variety of cellular activities
SWP_RS15135	SM00382	ATPases associated with a variety of cellular activities
SWP_RS15145	SM00422	helix_turn_helix, mercury resistance
SWP_RS15160	SM00822	SWP_RS15160
SWP_RS15275	SM00642	Alpha-amylase domain
SWP_RS15310	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS15355	SM01350	SWP_RS15355
SWP_RS15380	SM00422	helix_turn_helix, mercury resistance
SWP_RS15400	SM00878	Biotin carboxylase C-terminal domain
SWP_RS15410	SM00882	Coenzyme A transferase
SWP_RS15415	SM00882	Coenzyme A transferase
SWP_RS15450	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS15495	SM00893	Electron transfer flavoprotein domain
SWP_RS15500	SM00893	Electron transfer flavoprotein domain
SWP_RS15505	SM00528	Domain in histone-like proteins of HNS family
SWP_RS15560	SM00382	ATPases associated with a variety of cellular activities
SWP_RS15585	SM00382	ATPases associated with a variety of cellular activities
SWP_RS15595	SM00387	Histidine kinase-like ATPases
SWP_RS15595	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS15595	SM00448	cheY-homologous receiver domain
SWP_RS15600	SM00421	helix_turn_helix, Lux Regulon
SWP_RS15600	SM00448	cheY-homologous receiver domain
SWP_RS15615	SM00829	Enoylreductase
SWP_RS15645	SM00267	diguanylate cyclase
SWP_RS15650	SM00977	TilS substrate C-terminal domain
SWP_RS15655	SM00481	DNA polymerase alpha chain like domain
SWP_RS15685	SM00935	Outer membrane protein (OmpH-like)
SWP_RS15695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS15740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS15845	SM00849	Metallo-beta-lactamase superfamily
SWP_RS15865	SM00822	SWP_RS15865
SWP_RS15865	SM00825	Beta-ketoacyl synthase
SWP_RS15865	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SWP_RS15870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SWP_RS15875	SM00825	Beta-ketoacyl synthase
SWP_RS15895	SM00267	diguanylate cyclase
SWP_RS15925	SM00487	DEAD-like helicases superfamily
SWP_RS15925	SM00490	helicase superfamily c-terminal domain
SWP_RS15960	SM00448	cheY-homologous receiver domain
SWP_RS15960	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS15965	SM00387	Histidine kinase-like ATPases
SWP_RS15975	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SWP_RS15995	SM00052	Putative diguanylate phosphodiesterase
SWP_RS15995	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS15995	SM00091	PAS domain
SWP_RS15995	SM00267	diguanylate cyclase
SWP_RS16070	SM00732	Likely ribonuclease with RNase H fold.
SWP_RS16085	SM01329	SWP_RS16085
SWP_RS16115	SM00981	SWP_RS16115
SWP_RS16145	SM00861	Transketolase, pyrimidine binding domain
SWP_RS16265	SM00487	DEAD-like helicases superfamily
SWP_RS16265	SM00490	helicase superfamily c-terminal domain
SWP_RS16270	SM00052	Putative diguanylate phosphodiesterase
SWP_RS16270	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS16270	SM00091	PAS domain
SWP_RS16270	SM00267	diguanylate cyclase
SWP_RS16285	SM00052	Putative diguanylate phosphodiesterase
SWP_RS16285	SM00267	diguanylate cyclase
SWP_RS16320	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SWP_RS16325	SM00028	Tetratricopeptide repeats
SWP_RS16330	SM00267	diguanylate cyclase
SWP_RS16340	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SWP_RS16340	SM00475	5'-3' exonuclease
SWP_RS16355	SM00382	ATPases associated with a variety of cellular activities
SWP_RS16360	SM00382	ATPases associated with a variety of cellular activities
SWP_RS16380	SM01152	SWP_RS16380
SWP_RS16395	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS16430	SM00478	endonuclease III
SWP_RS16440	SM00867	YceI-like domain 
SWP_RS16520	SM01081	Putative carbohydrate binding domain
SWP_RS16560	SM00354	helix_turn _helix lactose operon repressor
SWP_RS16565	SM00938	Nitrogen regulatory protein P-II
SWP_RS16630	SM00904	Riboflavin kinase
SWP_RS16645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS16695	SM00518	AP endonuclease family 2
SWP_RS16750	SM00830	Chorismate mutase type II
SWP_RS16775	SM00830	Chorismate mutase type II
SWP_RS16815	SM01091	Transporter associated domain
SWP_RS16850	SM00358	Double-stranded RNA binding motif
SWP_RS16850	SM00535	Ribonuclease III family
SWP_RS16920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS16935	SM00927	DNA mismatch repair enzyme MutH
SWP_RS16955	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS16975	SM00100	Cyclic nucleotide-monophosphate binding domain
SWP_RS16975	SM00419	helix_turn_helix, cAMP Regulatory protein
SWP_RS16980	SM00420	helix_turn_helix, Deoxyribose operon repressor
SWP_RS17015	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS17060	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS17120	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS17130	SM00098	Alkaline phosphatase homologues
SWP_RS17195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS17195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS17195	SM01358	SWP_RS17195
SWP_RS17230	SM00363	S4 RNA-binding domain
SWP_RS17245	SM00860	SMI1 / KNR4 family
SWP_RS17280	SM00919	Malic enzyme, NAD binding domain
SWP_RS17280	SM01274	SWP_RS17280
SWP_RS17295	SM00028	Tetratricopeptide repeats
SWP_RS17295	SM00267	diguanylate cyclase
SWP_RS17335	SM00937	SWP_RS17335
SWP_RS17355	SM01400	SWP_RS17355
SWP_RS17360	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS17435	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS17450	SM01091	Transporter associated domain
SWP_RS17460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS17460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS17520	SM00936	Penicillin-binding protein 5, C-terminal domain 
SWP_RS17535	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS17585	SM00382	ATPases associated with a variety of cellular activities
SWP_RS17585	SM01086	C-terminal, D2-small domain, of ClpB protein
SWP_RS17595	SM00363	S4 RNA-binding domain
SWP_RS17650	SM00028	Tetratricopeptide repeats
SWP_RS17665	SM00938	Nitrogen regulatory protein P-II
SWP_RS17680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS17680	SM00387	Histidine kinase-like ATPases
SWP_RS17685	SM00421	helix_turn_helix, Lux Regulon
SWP_RS17685	SM00448	cheY-homologous receiver domain
SWP_RS17695	SM00091	PAS domain
SWP_RS17695	SM00382	ATPases associated with a variety of cellular activities
SWP_RS17740	SM00382	ATPases associated with a variety of cellular activities
SWP_RS17785	SM00382	ATPases associated with a variety of cellular activities
SWP_RS17790	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS17855	SM00448	cheY-homologous receiver domain
SWP_RS17855	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS17860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS17860	SM00387	Histidine kinase-like ATPases
SWP_RS17860	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS17900	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS17930	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS17985	SM00474	3'-5' exonuclease
SWP_RS18025	SM00267	diguanylate cyclase
SWP_RS18025	SM01079	SWP_RS18025
SWP_RS18130	SM00090	RIO-like kinase
SWP_RS18140	SM00986	Uracil DNA glycosylase superfamily
SWP_RS18140	SM00987	UreE urease accessory protein, C-terminal domain 
SWP_RS18170	SM00382	ATPases associated with a variety of cellular activities
SWP_RS18200	SM00271	DnaJ molecular chaperone homology domain
SWP_RS18230	SM00650	Ribosomal RNA adenine dimethylases
SWP_RS18245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS18245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS18310	SM00382	ATPases associated with a variety of cellular activities
SWP_RS18350	SM00382	ATPases associated with a variety of cellular activities
SWP_RS18400	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS18410	SM00363	S4 RNA-binding domain
SWP_RS18440	SM01154	SWP_RS18440
SWP_RS18545	SM00382	ATPases associated with a variety of cellular activities
SWP_RS18555	SM01230	SWP_RS18555
SWP_RS18565	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS18590	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS18595	SM00849	Metallo-beta-lactamase superfamily
SWP_RS18700	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SWP_RS18745	SM00487	DEAD-like helicases superfamily
SWP_RS18745	SM00490	helicase superfamily c-terminal domain
SWP_RS18765	SM00244	prohibitin homologues
SWP_RS18865	SM00487	DEAD-like helicases superfamily
SWP_RS18865	SM00490	helicase superfamily c-terminal domain
SWP_RS18890	SM00091	PAS domain
SWP_RS18925	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SWP_RS18930	SM00861	Transketolase, pyrimidine binding domain
SWP_RS18980	SM00267	diguanylate cyclase
SWP_RS19095	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS19095	SM00382	ATPases associated with a variety of cellular activities
SWP_RS19140	SM00052	Putative diguanylate phosphodiesterase
SWP_RS19140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS19140	SM00091	PAS domain
SWP_RS19140	SM00267	diguanylate cyclase
SWP_RS19195	SM00937	SWP_RS19195
SWP_RS19255	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS19280	SM00267	diguanylate cyclase
SWP_RS19345	SM00344	helix_turn_helix ASNC type
SWP_RS19375	SM00448	cheY-homologous receiver domain
SWP_RS19375	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS19405	SM00062	Bacterial periplasmic substrate-binding proteins
SWP_RS19405	SM00387	Histidine kinase-like ATPases
SWP_RS19410	SM00382	ATPases associated with a variety of cellular activities
SWP_RS19410	SM00448	cheY-homologous receiver domain
SWP_RS19480	SM00900	SWP_RS19480
SWP_RS19510	SM00849	Metallo-beta-lactamase superfamily
SWP_RS19530	SM00487	DEAD-like helicases superfamily
SWP_RS19530	SM00490	helicase superfamily c-terminal domain
SWP_RS19530	SM00847	Helicase associated domain (HA2)  Add an annotation
SWP_RS19545	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS19610	SM00382	ATPases associated with a variety of cellular activities
SWP_RS19670	SM00028	Tetratricopeptide repeats
SWP_RS19670	SM00267	diguanylate cyclase
SWP_RS19690	SM00028	Tetratricopeptide repeats
SWP_RS19690	SM00267	diguanylate cyclase
SWP_RS19715	SM00419	helix_turn_helix, cAMP Regulatory protein
SWP_RS19745	SM01060	SWP_RS19745
SWP_RS19800	SM00421	helix_turn_helix, Lux Regulon
SWP_RS19820	SM00448	cheY-homologous receiver domain
SWP_RS19820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS19825	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS19825	SM00091	PAS domain
SWP_RS19825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS19825	SM00387	Histidine kinase-like ATPases
SWP_RS19825	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS19825	SM00448	cheY-homologous receiver domain
SWP_RS19830	SM00382	ATPases associated with a variety of cellular activities
SWP_RS19850	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS19890	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS19890	SM00267	diguanylate cyclase
SWP_RS19895	SM00878	Biotin carboxylase C-terminal domain
SWP_RS19915	SM00731	SprT homologues.
SWP_RS19935	SM00098	Alkaline phosphatase homologues
SWP_RS19970	SM00530	Helix-turn-helix XRE-family like proteins 
SWP_RS20035	SM00382	ATPases associated with a variety of cellular activities
SWP_RS20125	SM00220	Serine/Threonine protein kinases, catalytic domain
SWP_RS20150	SM01038	Beta galactosidase small chain
SWP_RS20230	SM00014	Acid phosphatase homologues
SWP_RS20265	SM00487	DEAD-like helicases superfamily
SWP_RS20265	SM00490	helicase superfamily c-terminal domain
SWP_RS20315	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS20370	SM00822	SWP_RS20370
SWP_RS20395	SM00382	ATPases associated with a variety of cellular activities
SWP_RS20445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SWP_RS20445	SM00267	diguanylate cyclase
SWP_RS20450	SM00448	cheY-homologous receiver domain
SWP_RS20455	SM00387	Histidine kinase-like ATPases
SWP_RS20500	SM00450	Rhodanese Homology Domain
SWP_RS20500	SM00849	Metallo-beta-lactamase superfamily
SWP_RS20510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS20510	SM00091	PAS domain
SWP_RS20510	SM00387	Histidine kinase-like ATPases
SWP_RS20510	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS20510	SM00448	cheY-homologous receiver domain
SWP_RS20590	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS20590	SM00871	Bacterial transcription activator, effector binding domain
SWP_RS20605	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS20680	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS20690	SM00382	ATPases associated with a variety of cellular activities
SWP_RS20695	SM00710	Parallel beta-helix repeats
SWP_RS20695	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SWP_RS20725	SM00450	Rhodanese Homology Domain
SWP_RS20750	SM00028	Tetratricopeptide repeats
SWP_RS20750	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS20900	SM00052	Putative diguanylate phosphodiesterase
SWP_RS20900	SM00091	PAS domain
SWP_RS20900	SM00267	diguanylate cyclase
SWP_RS20910	SM00244	prohibitin homologues
SWP_RS20915	SM00244	prohibitin homologues
SWP_RS20950	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS21005	SM00422	helix_turn_helix, mercury resistance
SWP_RS21010	SM00798	AICARFT/IMPCHase bienzyme
SWP_RS21010	SM00851	MGS-like domain
SWP_RS21015	SM01209	SWP_RS21015
SWP_RS21015	SM01210	SWP_RS21015
SWP_RS21040	SM00448	cheY-homologous receiver domain
SWP_RS21040	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS21045	SM00387	Histidine kinase-like ATPases
SWP_RS21045	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS21095	SM00052	Putative diguanylate phosphodiesterase
SWP_RS21095	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS21095	SM00091	PAS domain
SWP_RS21095	SM00267	diguanylate cyclase
SWP_RS21115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS21115	SM00895	SWP_RS21115
SWP_RS21125	SM00644	SWP_RS21125
SWP_RS21215	SM00052	Putative diguanylate phosphodiesterase
SWP_RS21215	SM00091	PAS domain
SWP_RS21215	SM00267	diguanylate cyclase
SWP_RS21220	SM01144	SWP_RS21220
SWP_RS21245	SM00671	Sel1-like repeats.
SWP_RS21270	SM00344	helix_turn_helix ASNC type
SWP_RS21285	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SWP_RS21310	SM00382	ATPases associated with a variety of cellular activities
SWP_RS21315	SM00382	ATPases associated with a variety of cellular activities
SWP_RS21315	SM00962	SRP54-type protein, GTPase domain
SWP_RS21315	SM00963	SRP54-type protein, helical bundle domain
SWP_RS21370	SM00267	diguanylate cyclase
SWP_RS21385	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS21395	SM00563	Phosphate acyltransferases
SWP_RS21480	SM00631	SWP_RS21480
SWP_RS21505	SM00316	Ribosomal protein S1-like RNA-binding domain
SWP_RS21505	SM00732	Likely ribonuclease with RNase H fold.
SWP_RS21510	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS21555	SM00448	cheY-homologous receiver domain
SWP_RS21555	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS21560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS21560	SM00387	Histidine kinase-like ATPases
SWP_RS21560	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS21570	SM00382	ATPases associated with a variety of cellular activities
SWP_RS21575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS21575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS21590	SM00347	helix_turn_helix multiple antibiotic resistance protein
SWP_RS21600	SM01118	SWP_RS21600
SWP_RS21605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SWP_RS21615	SM00014	Acid phosphatase homologues
SWP_RS21700	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS21715	SM00060	Fibronectin type 3 domain
SWP_RS21870	SM00893	Electron transfer flavoprotein domain
SWP_RS21875	SM00893	Electron transfer flavoprotein domain
SWP_RS21905	SM00028	Tetratricopeptide repeats
SWP_RS21935	SM00382	ATPases associated with a variety of cellular activities
SWP_RS21965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SWP_RS21990	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22015	SM00387	Histidine kinase-like ATPases
SWP_RS22015	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS22020	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22020	SM00448	cheY-homologous receiver domain
SWP_RS22035	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22045	SM00852	Probable molybdopterin binding domain
SWP_RS22050	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS22090	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SWP_RS22090	SM01232	SWP_RS22090
SWP_RS22115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS22115	SM00387	Histidine kinase-like ATPases
SWP_RS22115	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS22120	SM00448	cheY-homologous receiver domain
SWP_RS22120	SM00862	Transcriptional regulatory protein, C terminal
SWP_RS22135	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22165	SM00852	Probable molybdopterin binding domain
SWP_RS22170	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS22180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS22180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS22200	SM00267	diguanylate cyclase
SWP_RS22215	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS22250	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS22270	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SWP_RS22330	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS22360	SM00563	Phosphate acyltransferases
SWP_RS22450	SM00829	Enoylreductase
SWP_RS22455	SM00450	Rhodanese Homology Domain
SWP_RS22475	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SWP_RS22475	SM00474	3'-5' exonuclease
SWP_RS22475	SM00475	5'-3' exonuclease
SWP_RS22475	SM00482	DNA polymerase A domain
SWP_RS22505	SM00729	Elongator protein 3, MiaB family, Radical SAM
SWP_RS22560	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22585	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22625	SM00858	SWP_RS22625
SWP_RS22835	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22860	SM00420	helix_turn_helix, Deoxyribose operon repressor
SWP_RS22860	SM01134	SWP_RS22860
SWP_RS22885	SM00382	ATPases associated with a variety of cellular activities
SWP_RS22925	SM00470	ParB-like nuclease domain
SWP_RS22940	SM01228	SWP_RS22940
SWP_RS22955	SM00237	Domains in Na-Ca exchangers and integrin-beta4
SWP_RS22975	SM00342	helix_turn_helix, arabinose operon control protein
SWP_RS22985	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS23005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SWP_RS23005	SM00091	PAS domain
SWP_RS23005	SM00387	Histidine kinase-like ATPases
SWP_RS23005	SM00388	His Kinase A (phosphoacceptor) domain
SWP_RS23005	SM00448	cheY-homologous receiver domain
SWP_RS23055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SWP_RS23055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SWP_RS23120	SM00052	Putative diguanylate phosphodiesterase
SWP_RS23180	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SWP_RS23210	SM00060	Fibronectin type 3 domain
SWP_RS23220	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
