locus-tag class description SVI_RS00005 PF00258 Flavodoxin SVI_RS00015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SVI_RS00020 PF00115 Cytochrome C and Quinol oxidase polypeptide I SVI_RS00025 PF00510 Cytochrome c oxidase subunit III SVI_RS00030 PF00510 Cytochrome c oxidase subunit III SVI_RS00045 PF01156 Inosine-uridine preferring nucleoside hydrolase SVI_RS00060 PF01043 SecA preprotein cross-linking domain SVI_RS00060 PF07517 SecA DEAD-like domain SVI_RS00060 PF02810 SEC-C motif SVI_RS00060 PF07516 SecA Wing and Scaffold domain SVI_RS00065 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SVI_RS00070 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SVI_RS00075 PF04851 Type III restriction enzyme, res subunit SVI_RS00075 PF08463 EcoEI R protein C-terminal SVI_RS00075 PF00271 Helicase conserved C-terminal domain SVI_RS00075 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SVI_RS00090 PF01975 Survival protein SurE SVI_RS00100 PF00270 DEAD/DEAH box helicase SVI_RS00100 PF00271 Helicase conserved C-terminal domain SVI_RS00100 PF11898 Domain of unknown function (DUF3418) SVI_RS00100 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SVI_RS00100 PF04408 Helicase associated domain (HA2) SVI_RS00105 PF10396 GTP-binding protein TrmE N-terminus SVI_RS00105 PF12631 MnmE helical domain SVI_RS00105 PF01926 50S ribosome-binding GTPase SVI_RS00110 PF14849 YidC periplasmic domain SVI_RS00110 PF02096 60Kd inner membrane protein SVI_RS00115 PF00825 Ribonuclease P SVI_RS00120 PF11638 DnaA N-terminal domain SVI_RS00120 PF08299 Bacterial dnaA protein helix-turn-helix SVI_RS00120 PF00308 Bacterial dnaA protein SVI_RS00125 PF02768 DNA polymerase III beta subunit, C-terminal domain SVI_RS00125 PF02767 DNA polymerase III beta subunit, central domain SVI_RS00125 PF00712 DNA polymerase III beta subunit, N-terminal domain SVI_RS00130 PF02463 RecF/RecN/SMC N terminal domain SVI_RS00135 PF01751 Toprim domain SVI_RS00135 PF00986 DNA gyrase B subunit, carboxyl terminus SVI_RS00135 PF00204 DNA gyrase B SVI_RS00135 PF18053 DNA gyrase B subunit insert domain SVI_RS00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS00145 PF03746 LamB/YcsF family SVI_RS00150 PF02626 Carboxyltransferase domain, subdomain A and B SVI_RS00155 PF02682 Carboxyltransferase domain, subdomain C and D SVI_RS00160 PF00013 KH domain SVI_RS00160 PF12072 Domain of unknown function (DUF3552) SVI_RS00160 PF01966 HD domain SVI_RS00165 PF02092 Glycyl-tRNA synthetase beta subunit SVI_RS00165 PF05746 DALR anticodon binding domain SVI_RS00170 PF02091 Glycyl-tRNA synthetase alpha subunit SVI_RS00175 PF03352 Methyladenine glycosylase SVI_RS00180 PF07676 WD40-like Beta Propeller Repeat SVI_RS00180 PF00326 Prolyl oligopeptidase family SVI_RS00190 PF01206 Sulfurtransferase TusA SVI_RS00195 PF04073 Aminoacyl-tRNA editing domain SVI_RS00210 PF02803 Thiolase, C-terminal domain SVI_RS00210 PF00108 Thiolase, N-terminal domain SVI_RS00215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SVI_RS00215 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS00215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SVI_RS00220 PF00557 Metallopeptidase family M24 SVI_RS00225 PF01205 Uncharacterized protein family UPF0029 SVI_RS00225 PF09186 Domain of unknown function (DUF1949) SVI_RS00230 PF02386 Cation transport protein SVI_RS00235 PF12724 Flavodoxin domain SVI_RS00240 PF01022 Bacterial regulatory protein, arsR family SVI_RS00245 PF02386 Cation transport protein SVI_RS00250 PF02254 TrkA-N domain SVI_RS00250 PF02080 TrkA-C domain SVI_RS00255 PF01029 NusB family SVI_RS00255 PF01189 16S rRNA methyltransferase RsmB/F SVI_RS00260 PF00551 Formyl transferase SVI_RS00260 PF02911 Formyl transferase, C-terminal domain SVI_RS00265 PF01327 Polypeptide deformylase SVI_RS00275 PF17782 DprA winged helix domain SVI_RS00275 PF02481 DNA recombination-mediator protein A SVI_RS00280 PF04361 Protein of unknown function (DUF494) SVI_RS00285 PF01752 Collagenase SVI_RS00285 PF08453 Peptidase family M9 N-terminal SVI_RS00295 PF01300 Telomere recombination SVI_RS00300 PF01218 Coproporphyrinogen III oxidase SVI_RS00305 PF08501 Shikimate dehydrogenase substrate binding domain SVI_RS00305 PF01488 Shikimate / quinate 5-dehydrogenase SVI_RS00305 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SVI_RS00315 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS00335 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS00340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SVI_RS00340 PF12833 Helix-turn-helix domain SVI_RS00365 PF12146 Serine aminopeptidase, S33 SVI_RS00375 PF04055 Radical SAM superfamily SVI_RS00375 PF06969 HemN C-terminal domain SVI_RS00385 PF04220 Der GTPase activator (YihI) SVI_RS00395 PF00034 Cytochrome c SVI_RS00400 PF01926 50S ribosome-binding GTPase SVI_RS00405 PF00476 DNA polymerase family A SVI_RS00405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SVI_RS00405 PF01612 3'-5' exonuclease SVI_RS00405 PF01367 5'-3' exonuclease, C-terminal SAM fold SVI_RS00415 PF01694 Rhomboid family SVI_RS00415 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SVI_RS00420 PF00581 Rhodanese-like domain SVI_RS00425 PF00107 Zinc-binding dehydrogenase SVI_RS00425 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS00430 PF00155 Aminotransferase class I and II SVI_RS00435 PF08360 QacR-like protein, C-terminal region SVI_RS00435 PF00440 Bacterial regulatory proteins, tetR family SVI_RS00445 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SVI_RS00455 PF04321 RmlD substrate binding domain SVI_RS00460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SVI_RS00470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SVI_RS00495 PF01467 Cytidylyltransferase-like SVI_RS00495 PF00294 pfkB family carbohydrate kinase SVI_RS00500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SVI_RS00505 PF01370 NAD dependent epimerase/dehydratase family SVI_RS00510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SVI_RS00515 PF00294 pfkB family carbohydrate kinase SVI_RS00515 PF01467 Cytidylyltransferase-like SVI_RS00520 PF01467 Cytidylyltransferase-like SVI_RS00530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SVI_RS00530 PF06827 Zinc finger found in FPG and IleRS SVI_RS00530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SVI_RS00540 PF00994 Probable molybdopterin binding domain SVI_RS00540 PF03454 MoeA C-terminal region (domain IV) SVI_RS00540 PF03453 MoeA N-terminal region (domain I and II) SVI_RS00545 PF12804 MobA-like NTP transferase domain SVI_RS00550 PF02592 Putative vitamin uptake transporter SVI_RS00560 PF00425 chorismate binding enzyme SVI_RS00565 PF01966 HD domain SVI_RS00565 PF11871 Domain of unknown function (DUF3391) SVI_RS00580 PF03601 Conserved hypothetical protein 698 SVI_RS00585 PF13181 Tetratricopeptide repeat SVI_RS00585 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SVI_RS00590 PF01270 Glycosyl hydrolases family 8 SVI_RS00595 PF03170 Bacterial cellulose synthase subunit SVI_RS00600 PF00535 Glycosyl transferase family 2 SVI_RS00600 PF07238 PilZ domain SVI_RS00600 PF03552 Cellulose synthase SVI_RS00615 PF10995 Cellulose biosynthesis GIL SVI_RS00620 PF11658 Cellulose biosynthesis protein BcsG SVI_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS00625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SVI_RS00640 PF01432 Peptidase family M3 SVI_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS00655 PF03466 LysR substrate binding domain SVI_RS00670 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS00670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS00675 PF00873 AcrB/AcrD/AcrF family SVI_RS00685 PF03806 AbgT putative transporter family SVI_RS00690 PF12833 Helix-turn-helix domain SVI_RS00695 PF01804 Penicillin amidase SVI_RS00705 PF01551 Peptidase family M23 SVI_RS00705 PF01464 Transglycosylase SLT domain SVI_RS00705 PF10145 Phage-related minor tail protein SVI_RS00715 PF03466 LysR substrate binding domain SVI_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS00720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SVI_RS00725 PF04445 Putative SAM-dependent methyltransferase SVI_RS00730 PF08534 Redoxin SVI_RS00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS00740 PF00672 HAMP domain SVI_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS00740 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS00745 PF00072 Response regulator receiver domain SVI_RS00745 PF00486 Transcriptional regulatory protein, C terminal SVI_RS00755 PF03449 Transcription elongation factor, N-terminal SVI_RS00755 PF01272 Transcription elongation factor, GreA/GreB, C-term SVI_RS00765 PF00575 S1 RNA binding domain SVI_RS00765 PF09371 Tex-like protein N-terminal domain SVI_RS00765 PF17674 HHH domain SVI_RS00765 PF16921 Tex protein YqgF-like domain SVI_RS00770 PF00884 Sulfatase SVI_RS00780 PF00561 alpha/beta hydrolase fold SVI_RS00785 PF00156 Phosphoribosyl transferase domain SVI_RS00795 PF01106 NifU-like domain SVI_RS00795 PF01521 Iron-sulphur cluster biosynthesis SVI_RS00800 PF01554 MatE SVI_RS00805 PF01522 Polysaccharide deacetylase SVI_RS00810 PF00072 Response regulator receiver domain SVI_RS00810 PF01339 CheB methylesterase SVI_RS00815 PF01739 CheR methyltransferase, SAM binding domain SVI_RS00815 PF03705 CheR methyltransferase, all-alpha domain SVI_RS00820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS00820 PF00672 HAMP domain SVI_RS00820 PF02203 Tar ligand binding domain homologue SVI_RS00825 PF01584 CheW-like domain SVI_RS00830 PF01627 Hpt domain SVI_RS00830 PF01584 CheW-like domain SVI_RS00830 PF09078 CheY binding SVI_RS00830 PF02895 Signal transducing histidine kinase, homodimeric domain SVI_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS00835 PF00072 Response regulator receiver domain SVI_RS00845 PF02630 SCO1/SenC SVI_RS00850 PF01040 UbiA prenyltransferase family SVI_RS00855 PF02628 Cytochrome oxidase assembly protein SVI_RS00865 PF02104 SURF1 family SVI_RS00875 PF00510 Cytochrome c oxidase subunit III SVI_RS00880 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SVI_RS00885 PF00115 Cytochrome C and Quinol oxidase polypeptide I SVI_RS00890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SVI_RS00890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SVI_RS00895 PF03846 Cell division inhibitor SulA SVI_RS00900 PF00717 Peptidase S24-like SVI_RS00900 PF01726 LexA DNA binding domain SVI_RS00905 PF01553 Acyltransferase SVI_RS00910 PF03222 Tryptophan/tyrosine permease family SVI_RS00915 PF00881 Nitroreductase family SVI_RS00930 PF13533 Biotin-lipoyl like SVI_RS00935 PF00072 Response regulator receiver domain SVI_RS00935 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS00940 PF00970 Oxidoreductase FAD-binding domain SVI_RS00940 PF00175 Oxidoreductase NAD-binding domain SVI_RS00940 PF00042 Globin SVI_RS00955 PF00672 HAMP domain SVI_RS00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS00960 PF00873 AcrB/AcrD/AcrF family SVI_RS00965 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS00965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS01005 PF00448 SRP54-type protein, GTPase domain SVI_RS01005 PF02881 SRP54-type protein, helical bundle domain SVI_RS01010 PF00005 ABC transporter SVI_RS01015 PF18075 FtsX extracellular domain SVI_RS01020 PF04545 Sigma-70, region 4 SVI_RS01020 PF04542 Sigma-70 region 2 SVI_RS01020 PF00140 Sigma-70 factor, region 1.2 SVI_RS01030 PF00501 AMP-binding enzyme SVI_RS01035 PF13378 Enolase C-terminal domain-like SVI_RS01040 PF12697 Alpha/beta hydrolase family SVI_RS01045 PF16582 Middle domain of thiamine pyrophosphate SVI_RS01045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SVI_RS01045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SVI_RS01050 PF01037 Lrp/AsnC ligand binding domain SVI_RS01055 PF13520 Amino acid permease SVI_RS01090 PF03466 LysR substrate binding domain SVI_RS01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS01095 PF07690 Major Facilitator Superfamily SVI_RS01120 PF05193 Peptidase M16 inactive domain SVI_RS01120 PF00675 Insulinase (Peptidase family M16) SVI_RS01140 PF00588 SpoU rRNA Methylase family SVI_RS01145 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS01145 PF00107 Zinc-binding dehydrogenase SVI_RS01150 PF03466 LysR substrate binding domain SVI_RS01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS01155 PF00672 HAMP domain SVI_RS01155 PF16527 Two-component sensor protein CpxA, periplasmic domain SVI_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS01155 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS01160 PF00486 Transcriptional regulatory protein, C terminal SVI_RS01160 PF00072 Response regulator receiver domain SVI_RS01170 PF16916 Dimerisation domain of Zinc Transporter SVI_RS01170 PF01545 Cation efflux family SVI_RS01190 PF04403 Paraquat-inducible protein A SVI_RS01195 PF02470 MlaD protein SVI_RS01205 PF00293 NUDIX domain SVI_RS01210 PF03884 DNA gyrase inhibitor YacG SVI_RS01215 PF07072 Cell division protein SVI_RS01220 PF01121 Dephospho-CoA kinase SVI_RS01225 PF06750 Bacterial Peptidase A24 N-terminal domain SVI_RS01225 PF01478 Type IV leader peptidase family SVI_RS01230 PF00482 Type II secretion system (T2SS), protein F SVI_RS01235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SVI_RS01235 PF00437 Type II/IV secretion system protein SVI_RS01240 PF00114 Pilin (bacterial filament) SVI_RS01240 PF07963 Prokaryotic N-terminal methylation motif SVI_RS01245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SVI_RS01245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SVI_RS01250 PF01510 N-acetylmuramoyl-L-alanine amidase SVI_RS01260 PF00392 Bacterial regulatory proteins, gntR family SVI_RS01260 PF07729 FCD domain SVI_RS01265 PF17831 Pyruvate dehydrogenase E1 component middle domain SVI_RS01265 PF00456 Transketolase, thiamine diphosphate binding domain SVI_RS01270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SVI_RS01270 PF00364 Biotin-requiring enzyme SVI_RS01270 PF02817 e3 binding domain SVI_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS01275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SVI_RS01280 PF00563 EAL domain SVI_RS01280 PF03707 Bacterial signalling protein N terminal repeat SVI_RS01280 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS01285 PF01734 Patatin-like phospholipase SVI_RS01290 PF01431 Peptidase family M13 SVI_RS01290 PF05649 Peptidase family M13 SVI_RS01295 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS01300 PF11791 Aconitate B N-terminal domain SVI_RS01300 PF00330 Aconitase family (aconitate hydratase) SVI_RS01300 PF06434 Aconitate hydratase 2 N-terminus SVI_RS01310 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS01310 PF07724 AAA domain (Cdc48 subfamily) SVI_RS01310 PF10431 C-terminal, D2-small domain, of ClpB protein SVI_RS01315 PF00227 Proteasome subunit SVI_RS01325 PF05746 DALR anticodon binding domain SVI_RS01325 PF00750 tRNA synthetases class I (R) SVI_RS01325 PF03485 Arginyl tRNA synthetase N terminal domain SVI_RS01330 PF00270 DEAD/DEAH box helicase SVI_RS01330 PF17764 3′ DNA-binding domain (3′BD) SVI_RS01330 PF00271 Helicase conserved C-terminal domain SVI_RS01330 PF18074 Primosomal protein N C-terminal domain SVI_RS01330 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SVI_RS01340 PF01197 Ribosomal protein L31 SVI_RS01345 PF00390 Malic enzyme, N-terminal domain SVI_RS01345 PF03949 Malic enzyme, NAD binding domain SVI_RS01350 PF17157 Gammaproteobacterial periplasmic sensor domain SVI_RS01350 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS01350 PF00563 EAL domain SVI_RS01375 PF00263 Bacterial type II and III secretion system protein SVI_RS01375 PF03958 Bacterial type II/III secretion system short domain SVI_RS01380 PF01471 Putative peptidoglycan binding domain SVI_RS01380 PF13401 AAA domain SVI_RS01390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SVI_RS01390 PF00437 Type II/IV secretion system protein SVI_RS01395 PF00482 Type II secretion system (T2SS), protein F SVI_RS01405 PF07963 Prokaryotic N-terminal methylation motif SVI_RS01410 PF00114 Pilin (bacterial filament) SVI_RS01410 PF07963 Prokaryotic N-terminal methylation motif SVI_RS01415 PF07963 Prokaryotic N-terminal methylation motif SVI_RS01420 PF07963 Prokaryotic N-terminal methylation motif SVI_RS01460 PF04085 rod shape-determining protein MreC SVI_RS01465 PF04093 rod shape-determining protein MreD SVI_RS01470 PF02545 Maf-like protein SVI_RS01475 PF00575 S1 RNA binding domain SVI_RS01475 PF10150 Ribonuclease E/G family SVI_RS01480 PF13116 Protein of unknown function SVI_RS01480 PF13502 AsmA-like C-terminal region SVI_RS01485 PF00795 Carbon-nitrogen hydrolase SVI_RS01490 PF01523 Putative modulator of DNA gyrase SVI_RS01500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS01520 PF04751 Protein of unknown function (DUF615) SVI_RS01525 PF01523 Putative modulator of DNA gyrase SVI_RS01530 PF01022 Bacterial regulatory protein, arsR family SVI_RS01535 PF01758 Sodium Bile acid symporter family SVI_RS01540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SVI_RS01540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SVI_RS01550 PF01235 Sodium:alanine symporter family SVI_RS01560 PF00216 Bacterial DNA-binding protein SVI_RS01565 PF00072 Response regulator receiver domain SVI_RS01600 PF03975 CheD chemotactic sensory transduction SVI_RS01610 PF01268 Formate--tetrahydrofolate ligase SVI_RS01615 PF05552 Conserved TM helix SVI_RS01615 PF00924 Mechanosensitive ion channel SVI_RS01640 PF01553 Acyltransferase SVI_RS01645 PF06877 Regulator of ribonuclease activity B SVI_RS01650 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS01650 PF05230 MASE2 domain SVI_RS01655 PF01339 CheB methylesterase SVI_RS01655 PF00072 Response regulator receiver domain SVI_RS01660 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS01670 PF00176 SNF2 family N-terminal domain SVI_RS01670 PF18339 RapA N-terminal Tudor like domain 1 SVI_RS01670 PF18337 RapA N-terminal Tudor like domain SVI_RS01670 PF00271 Helicase conserved C-terminal domain SVI_RS01670 PF12137 RNA polymerase recycling family C-terminal SVI_RS01675 PF13638 PIN domain SVI_RS01675 PF02562 PhoH-like protein SVI_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS01680 PF00672 HAMP domain SVI_RS01680 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS01680 PF01627 Hpt domain SVI_RS01680 PF00072 Response regulator receiver domain SVI_RS01680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SVI_RS01710 PF00873 AcrB/AcrD/AcrF family SVI_RS01715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS01720 PF03466 LysR substrate binding domain SVI_RS01725 PF13599 Pentapeptide repeats (9 copies) SVI_RS01730 PF01554 MatE SVI_RS01735 PF00166 Chaperonin 10 Kd subunit SVI_RS01740 PF00118 TCP-1/cpn60 chaperonin family SVI_RS01760 PF01757 Acyltransferase family SVI_RS01770 PF02386 Cation transport protein SVI_RS01775 PF02080 TrkA-C domain SVI_RS01775 PF02254 TrkA-N domain SVI_RS01785 PF05922 Peptidase inhibitor I9 SVI_RS01785 PF00082 Subtilase family SVI_RS01785 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS01790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SVI_RS01795 PF13462 Thioredoxin SVI_RS01795 PF06965 Na+/H+ antiporter 1 SVI_RS01805 PF01047 MarR family SVI_RS01815 PF13460 NAD(P)H-binding SVI_RS01820 PF06865 Pyrimidine/purine nucleoside phosphorylase SVI_RS01850 PF00206 Lyase SVI_RS01850 PF10415 Fumarase C C-terminus SVI_RS01855 PF01569 PAP2 superfamily SVI_RS01860 PF17785 PUA-like domain SVI_RS01860 PF10672 S-adenosylmethionine-dependent methyltransferase SVI_RS01875 PF01266 FAD dependent oxidoreductase SVI_RS01875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SVI_RS01885 PF00672 HAMP domain SVI_RS01885 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS01890 PF00072 Response regulator receiver domain SVI_RS01890 PF00486 Transcriptional regulatory protein, C terminal SVI_RS01895 PF00691 OmpA family SVI_RS01895 PF13488 Glycine zipper SVI_RS01900 PF03448 MgtE intracellular N domain SVI_RS01900 PF00571 CBS domain SVI_RS01900 PF01769 Divalent cation transporter SVI_RS01905 PF00381 PTS HPr component phosphorylation site SVI_RS01910 PF03668 P-loop ATPase protein family SVI_RS01915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SVI_RS01920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SVI_RS01925 PF00309 Sigma-54 factor, Activator interacting domain (AID) SVI_RS01925 PF04963 Sigma-54 factor, core binding domain SVI_RS01925 PF04552 Sigma-54, DNA binding domain SVI_RS01930 PF00005 ABC transporter SVI_RS01930 PF12399 Branched-chain amino acid ATP-binding cassette transporter SVI_RS01950 PF01380 SIS domain SVI_RS01950 PF00571 CBS domain SVI_RS01955 PF01699 Sodium/calcium exchanger protein SVI_RS01960 PF00005 ABC transporter SVI_RS01965 PF02405 Permease MlaE SVI_RS01970 PF02470 MlaD protein SVI_RS01975 PF05494 MlaC protein SVI_RS01980 PF01740 STAS domain SVI_RS01985 PF01722 BolA-like protein SVI_RS01990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SVI_RS01995 PF13180 PDZ domain SVI_RS02000 PF00595 PDZ domain SVI_RS02000 PF13180 PDZ domain SVI_RS02010 PF03969 AFG1-like ATPase SVI_RS02015 PF00572 Ribosomal protein L13 SVI_RS02020 PF00380 Ribosomal protein S9/S16 SVI_RS02025 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SVI_RS02030 PF00709 Adenylosuccinate synthetase SVI_RS02035 PF08238 Sel1 repeat SVI_RS02040 PF00575 S1 RNA binding domain SVI_RS02040 PF00773 RNB domain SVI_RS02040 PF08206 Ribonuclease B OB domain SVI_RS02040 PF08461 Ribonuclease R winged-helix domain SVI_RS02040 PF17876 Cold shock domain SVI_RS02045 PF08032 RNA 2'-O ribose methyltransferase substrate binding SVI_RS02045 PF00588 SpoU rRNA Methylase family SVI_RS02060 PF01250 Ribosomal protein S6 SVI_RS02070 PF01084 Ribosomal protein S18 SVI_RS02075 PF01281 Ribosomal protein L9, N-terminal domain SVI_RS02075 PF03948 Ribosomal protein L9, C-terminal domain SVI_RS02080 PF00593 TonB dependent receptor SVI_RS02085 PF10459 Peptidase S46 SVI_RS02090 PF03796 DnaB-like helicase C terminal domain SVI_RS02090 PF00772 DnaB-like helicase N terminal domain SVI_RS02095 PF01168 Alanine racemase, N-terminal domain SVI_RS02095 PF00842 Alanine racemase, C-terminal domain SVI_RS02110 PF07963 Prokaryotic N-terminal methylation motif SVI_RS02115 PF01207 Dihydrouridine synthase (Dus) SVI_RS02135 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS02155 PF02321 Outer membrane efflux protein SVI_RS02160 PF00293 NUDIX domain SVI_RS02165 PF06853 Protein of unknown function (DUF1249) SVI_RS02170 PF00149 Calcineurin-like phosphoesterase SVI_RS02175 PF05728 Uncharacterised protein family (UPF0227) SVI_RS02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS02180 PF01751 Toprim domain SVI_RS02180 PF00986 DNA gyrase B subunit, carboxyl terminus SVI_RS02180 PF00204 DNA gyrase B SVI_RS02185 PF07995 Glucose / Sorbosone dehydrogenase SVI_RS02190 PF03989 DNA gyrase C-terminal domain, beta-propeller SVI_RS02190 PF00521 DNA gyrase/topoisomerase IV, subunit A SVI_RS02195 PF04324 BFD-like [2Fe-2S] binding domain SVI_RS02200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SVI_RS02210 PF12795 Mechanosensitive ion channel porin domain SVI_RS02210 PF12794 Mechanosensitive ion channel inner membrane domain 1 SVI_RS02210 PF00924 Mechanosensitive ion channel SVI_RS02215 PF00892 EamA-like transporter family SVI_RS02220 PF02666 Phosphatidylserine decarboxylase SVI_RS02225 PF03193 RsgA GTPase SVI_RS02230 PF00929 Exonuclease SVI_RS02260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SVI_RS02265 PF01520 N-acetylmuramoyl-L-alanine amidase SVI_RS02270 PF08676 MutL C terminal dimerisation domain SVI_RS02270 PF01119 DNA mismatch repair protein, C-terminal domain SVI_RS02280 PF17209 Hfq protein SVI_RS02285 PF16360 GTP-binding GTPase Middle Region SVI_RS02285 PF13167 GTP-binding GTPase N-terminal SVI_RS02285 PF01926 50S ribosome-binding GTPase SVI_RS02290 PF12221 Bacterial membrane protein N terminal SVI_RS02290 PF01145 SPFH domain / Band 7 family SVI_RS02295 PF01145 SPFH domain / Band 7 family SVI_RS02300 PF00355 Rieske [2Fe-2S] domain SVI_RS02300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SVI_RS02305 PF00033 Cytochrome b/b6/petB SVI_RS02305 PF00032 Cytochrome b(C-terminal)/b6/petD SVI_RS02310 PF02167 Cytochrome C1 family SVI_RS02315 PF02798 Glutathione S-transferase, N-terminal domain SVI_RS02315 PF00043 Glutathione S-transferase, C-terminal domain SVI_RS02320 PF04386 Stringent starvation protein B SVI_RS02325 PF00117 Glutamine amidotransferase class-I SVI_RS02340 PF00202 Aminotransferase class-III SVI_RS02345 PF04958 Arginine N-succinyltransferase beta subunit SVI_RS02350 PF00171 Aldehyde dehydrogenase family SVI_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS02365 PF00486 Transcriptional regulatory protein, C terminal SVI_RS02365 PF00072 Response regulator receiver domain SVI_RS02375 PF00027 Cyclic nucleotide-binding domain SVI_RS02375 PF13545 Crp-like helix-turn-helix domain SVI_RS02385 PF00485 Phosphoribulokinase / Uridine kinase family SVI_RS02395 PF00561 alpha/beta hydrolase fold SVI_RS02405 PF00732 GMC oxidoreductase SVI_RS02405 PF05199 GMC oxidoreductase SVI_RS02415 PF00005 ABC transporter SVI_RS02415 PF12848 ABC transporter SVI_RS02420 PF09526 Probable metal-binding protein (DUF2387) SVI_RS02425 PF01381 Helix-turn-helix SVI_RS02425 PF08671 Anti-repressor SinI SVI_RS02500 PF00270 DEAD/DEAH box helicase SVI_RS02500 PF03880 DbpA RNA binding domain SVI_RS02500 PF00271 Helicase conserved C-terminal domain SVI_RS02505 PF00270 DEAD/DEAH box helicase SVI_RS02505 PF00271 Helicase conserved C-terminal domain SVI_RS02520 PF00664 ABC transporter transmembrane region SVI_RS02520 PF00005 ABC transporter SVI_RS02525 PF00005 ABC transporter SVI_RS02525 PF00664 ABC transporter transmembrane region SVI_RS02535 PF01619 Proline dehydrogenase SVI_RS02535 PF14850 DNA-binding domain of Proline dehydrogenase SVI_RS02535 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SVI_RS02535 PF00171 Aldehyde dehydrogenase family SVI_RS02540 PF08239 Bacterial SH3 domain SVI_RS02545 PF01384 Phosphate transporter family SVI_RS02550 PF01865 Protein of unknown function DUF47 SVI_RS02555 PF01928 CYTH domain SVI_RS02560 PF07885 Ion channel SVI_RS02600 PF03710 Glutamate-ammonia ligase adenylyltransferase SVI_RS02600 PF08335 GlnD PII-uridylyltransferase SVI_RS02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS02620 PF03466 LysR substrate binding domain SVI_RS02630 PF00857 Isochorismatase family SVI_RS02635 PF03649 Uncharacterised protein family (UPF0014) SVI_RS02645 PF00672 HAMP domain SVI_RS02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS02650 PF03969 AFG1-like ATPase SVI_RS02655 PF00223 Photosystem I psaA/psaB protein SVI_RS02655 PF00691 OmpA family SVI_RS02695 PF05193 Peptidase M16 inactive domain SVI_RS02705 PF03279 Bacterial lipid A biosynthesis acyltransferase SVI_RS02730 PF01694 Rhomboid family SVI_RS02735 PF01593 Flavin containing amine oxidoreductase SVI_RS02745 PF00175 Oxidoreductase NAD-binding domain SVI_RS02745 PF00258 Flavodoxin SVI_RS02745 PF00667 FAD binding domain SVI_RS02750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SVI_RS02750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SVI_RS02755 PF01507 Phosphoadenosine phosphosulfate reductase family SVI_RS02780 PF08534 Redoxin SVI_RS02800 PF10414 Sirohaem synthase dimerisation region SVI_RS02800 PF14824 Sirohaem biosynthesis protein central SVI_RS02800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SVI_RS02820 PF09375 Imelysin SVI_RS02830 PF00360 Phytochrome region SVI_RS02830 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS02830 PF00563 EAL domain SVI_RS02830 PF01590 GAF domain SVI_RS02835 PF01590 GAF domain SVI_RS02835 PF00360 Phytochrome region SVI_RS02835 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS02835 PF00563 EAL domain SVI_RS02855 PF02321 Outer membrane efflux protein SVI_RS02865 PF13533 Biotin-lipoyl like SVI_RS02875 PF01594 AI-2E family transporter SVI_RS02900 PF00892 EamA-like transporter family SVI_RS02905 PF03889 Alternative ribosome-rescue factor A SVI_RS02920 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SVI_RS02930 PF00005 ABC transporter SVI_RS02940 PF02563 Polysaccharide biosynthesis/export protein SVI_RS02940 PF10531 SLBB domain SVI_RS02950 PF02350 UDP-N-acetylglucosamine 2-epimerase SVI_RS02955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SVI_RS02955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SVI_RS02955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SVI_RS02970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS02970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS02970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS02970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS02980 PF02348 Cytidylyltransferase SVI_RS02990 PF05159 Capsule polysaccharide biosynthesis protein SVI_RS02995 PF05159 Capsule polysaccharide biosynthesis protein SVI_RS03005 PF05025 RbsD / FucU transport protein family SVI_RS03010 PF00005 ABC transporter SVI_RS03015 PF02653 Branched-chain amino acid transport system / permease component SVI_RS03020 PF13407 Periplasmic binding protein domain SVI_RS03025 PF00294 pfkB family carbohydrate kinase SVI_RS03030 PF00356 Bacterial regulatory proteins, lacI family SVI_RS03040 PF00850 Histone deacetylase domain SVI_RS03050 PF01447 Thermolysin metallopeptidase, catalytic domain SVI_RS03050 PF07504 Fungalysin/Thermolysin Propeptide Motif SVI_RS03050 PF03413 Peptidase propeptide and YPEB domain SVI_RS03050 PF02868 Thermolysin metallopeptidase, alpha-helical domain SVI_RS03070 PF08335 GlnD PII-uridylyltransferase SVI_RS03070 PF01966 HD domain SVI_RS03070 PF01909 Nucleotidyltransferase domain SVI_RS03075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS03075 PF12729 Four helix bundle sensory module for signal transduction SVI_RS03075 PF00672 HAMP domain SVI_RS03080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS03080 PF00672 HAMP domain SVI_RS03095 PF00809 Pterin binding enzyme SVI_RS03095 PF02574 Homocysteine S-methyltransferase SVI_RS03095 PF02310 B12 binding domain SVI_RS03095 PF02965 Vitamin B12 dependent methionine synthase, activation domain SVI_RS03095 PF02607 B12 binding domain SVI_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS03100 PF00497 Bacterial extracellular solute-binding proteins, family 3 SVI_RS03100 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS03105 PF00300 Histidine phosphatase superfamily (branch 1) SVI_RS03110 PF00005 ABC transporter SVI_RS03115 PF01032 FecCD transport family SVI_RS03120 PF02277 Phosphoribosyltransferase SVI_RS03125 PF02654 Cobalamin-5-phosphate synthase SVI_RS03130 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SVI_RS03135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SVI_RS03135 PF07685 CobB/CobQ-like glutamine amidotransferase domain SVI_RS03140 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SVI_RS03140 PF12557 Cob(I)alamin adenosyltransferase N terminal SVI_RS03150 PF01497 Periplasmic binding protein SVI_RS03160 PF04143 Sulphur transport SVI_RS03180 PF00005 ABC transporter SVI_RS03185 PF02687 FtsX-like permease family SVI_RS03185 PF12704 MacB-like periplasmic core domain SVI_RS03185 PF00005 ABC transporter SVI_RS03190 PF02687 FtsX-like permease family SVI_RS03190 PF00005 ABC transporter SVI_RS03190 PF12704 MacB-like periplasmic core domain SVI_RS03195 PF00072 Response regulator receiver domain SVI_RS03195 PF02954 Bacterial regulatory protein, Fis family SVI_RS03195 PF00158 Sigma-54 interaction domain SVI_RS03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS03200 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS03200 PF00989 PAS fold SVI_RS03250 PF00175 Oxidoreductase NAD-binding domain SVI_RS03250 PF00970 Oxidoreductase FAD-binding domain SVI_RS03250 PF00042 Globin SVI_RS03260 PF00158 Sigma-54 interaction domain SVI_RS03260 PF01590 GAF domain SVI_RS03275 PF08000 Bacterial PH domain SVI_RS03285 PF16868 NMT1-like family SVI_RS03300 PF00155 Aminotransferase class I and II SVI_RS03305 PF02657 Fe-S metabolism associated domain SVI_RS03310 PF02657 Fe-S metabolism associated domain SVI_RS03315 PF00266 Aminotransferase class-V SVI_RS03325 PF00248 Aldo/keto reductase family SVI_RS03330 PF00583 Acetyltransferase (GNAT) family SVI_RS03335 PF01931 Protein of unknown function DUF84 SVI_RS03340 PF03222 Tryptophan/tyrosine permease family SVI_RS03345 PF03313 Serine dehydratase alpha chain SVI_RS03345 PF03315 Serine dehydratase beta chain SVI_RS03385 PF00438 S-adenosylmethionine synthetase, N-terminal domain SVI_RS03385 PF02772 S-adenosylmethionine synthetase, central domain SVI_RS03385 PF02773 S-adenosylmethionine synthetase, C-terminal domain SVI_RS03390 PF02780 Transketolase, C-terminal domain SVI_RS03390 PF02779 Transketolase, pyrimidine binding domain SVI_RS03390 PF00456 Transketolase, thiamine diphosphate binding domain SVI_RS03395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SVI_RS03395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SVI_RS03400 PF00162 Phosphoglycerate kinase SVI_RS03405 PF01116 Fructose-bisphosphate aldolase class-II SVI_RS03435 PF00873 AcrB/AcrD/AcrF family SVI_RS03445 PF00271 Helicase conserved C-terminal domain SVI_RS03445 PF00270 DEAD/DEAH box helicase SVI_RS03450 PF05175 Methyltransferase small domain SVI_RS03455 PF05525 Branched-chain amino acid transport protein SVI_RS03460 PF02899 Phage integrase, N-terminal SAM-like domain SVI_RS03460 PF00589 Phage integrase family SVI_RS03465 PF10411 Disulfide bond isomerase protein N-terminus SVI_RS03465 PF13098 Thioredoxin-like domain SVI_RS03470 PF17768 RecJ OB domain SVI_RS03470 PF02272 DHHA1 domain SVI_RS03470 PF01368 DHH family SVI_RS03500 PF11412 Disulphide bond corrector protein DsbC SVI_RS03500 PF02683 Cytochrome C biogenesis protein transmembrane region SVI_RS03505 PF00072 Response regulator receiver domain SVI_RS03505 PF00486 Transcriptional regulatory protein, C terminal SVI_RS03515 PF02810 SEC-C motif SVI_RS03515 PF07517 SecA DEAD-like domain SVI_RS03515 PF01043 SecA preprotein cross-linking domain SVI_RS03515 PF07516 SecA Wing and Scaffold domain SVI_RS03525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SVI_RS03530 PF05661 Protein of unknown function (DUF808) SVI_RS03535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SVI_RS03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS03540 PF03466 LysR substrate binding domain SVI_RS03545 PF03788 LrgA family SVI_RS03550 PF04172 LrgB-like family SVI_RS03565 PF01433 Peptidase family M1 domain SVI_RS03570 PF13036 Peptidoglycan-synthase activator LpoB SVI_RS03570 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SVI_RS03580 PF04102 SlyX SVI_RS03590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS03590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SVI_RS03595 PF06062 Uncharacterised protein family (UPF0231) SVI_RS03600 PF00072 Response regulator receiver domain SVI_RS03600 PF00196 Bacterial regulatory proteins, luxR family SVI_RS03605 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SVI_RS03605 PF07730 Histidine kinase SVI_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS03605 PF00672 HAMP domain SVI_RS03615 PF00543 Nitrogen regulatory protein P-II SVI_RS03620 PF00909 Ammonium Transporter Family SVI_RS03640 PF00793 DAHP synthetase I family SVI_RS03645 PF00005 ABC transporter SVI_RS03645 PF00664 ABC transporter transmembrane region SVI_RS03665 PF00175 Oxidoreductase NAD-binding domain SVI_RS03665 PF00970 Oxidoreductase FAD-binding domain SVI_RS03670 PF13417 Glutathione S-transferase, N-terminal domain SVI_RS03675 PF13416 Bacterial extracellular solute-binding protein SVI_RS03680 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS03685 PF00005 ABC transporter SVI_RS03690 PF04261 Dyp-type peroxidase family SVI_RS03705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SVI_RS03705 PF00056 lactate/malate dehydrogenase, NAD binding domain SVI_RS03710 PF00348 Polyprenyl synthetase SVI_RS03715 PF00829 Ribosomal prokaryotic L21 protein SVI_RS03720 PF01016 Ribosomal L27 protein SVI_RS03725 PF01926 50S ribosome-binding GTPase SVI_RS03725 PF01018 GTP1/OBG SVI_RS03730 PF06738 Putative threonine/serine exporter SVI_RS03735 PF12821 Threonine/Serine exporter, ThrE SVI_RS03740 PF00186 Dihydrofolate reductase SVI_RS03750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS03750 PF00672 HAMP domain SVI_RS03755 PF00149 Calcineurin-like phosphoesterase SVI_RS03760 PF04379 ApaG domain SVI_RS03765 PF00398 Ribosomal RNA adenine dimethylase SVI_RS03770 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SVI_RS03775 PF00639 PPIC-type PPIASE domain SVI_RS03775 PF09312 SurA N-terminal domain SVI_RS03780 PF04453 LPS transport system D SVI_RS03780 PF03968 OstA-like protein SVI_RS03785 PF01636 Phosphotransferase enzyme family SVI_RS03790 PF00483 Nucleotidyl transferase SVI_RS03795 PF00226 DnaJ domain SVI_RS03795 PF05099 Tellurite resistance protein TerB SVI_RS03800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SVI_RS03800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SVI_RS03805 PF07963 Prokaryotic N-terminal methylation motif SVI_RS03805 PF00114 Pilin (bacterial filament) SVI_RS03810 PF06945 Protein of unknown function (DUF1289) SVI_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS03815 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS03820 PF00486 Transcriptional regulatory protein, C terminal SVI_RS03820 PF00072 Response regulator receiver domain SVI_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS03835 PF03466 LysR substrate binding domain SVI_RS03840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS03840 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS03840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS03845 PF02780 Transketolase, C-terminal domain SVI_RS03845 PF02779 Transketolase, pyrimidine binding domain SVI_RS03850 PF00698 Acyl transferase domain SVI_RS03855 PF00583 Acetyltransferase (GNAT) family SVI_RS03870 PF09313 Domain of unknown function (DUF1971) SVI_RS03880 PF03358 NADPH-dependent FMN reductase SVI_RS03890 PF00849 RNA pseudouridylate synthase SVI_RS03890 PF01479 S4 domain SVI_RS03895 PF01184 GPR1/FUN34/yaaH family SVI_RS03910 PF01875 Memo-like protein SVI_RS03920 PF10458 Valyl tRNA synthetase tRNA binding arm SVI_RS03920 PF00133 tRNA synthetases class I (I, L, M and V) SVI_RS03920 PF08264 Anticodon-binding domain of tRNA SVI_RS03925 PF04364 DNA polymerase III chi subunit, HolC SVI_RS03945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS03950 PF01810 LysE type translocator SVI_RS03955 PF00883 Cytosol aminopeptidase family, catalytic domain SVI_RS03955 PF02789 Cytosol aminopeptidase family, N-terminal domain SVI_RS03960 PF03739 Lipopolysaccharide export system permease LptF/LptG SVI_RS03965 PF03739 Lipopolysaccharide export system permease LptF/LptG SVI_RS03985 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SVI_RS04000 PF00270 DEAD/DEAH box helicase SVI_RS04000 PF00271 Helicase conserved C-terminal domain SVI_RS04005 PF00563 EAL domain SVI_RS04005 PF03707 Bacterial signalling protein N terminal repeat SVI_RS04005 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS04015 PF07690 Major Facilitator Superfamily SVI_RS04020 PF01047 MarR family SVI_RS04020 PF00480 ROK family SVI_RS04025 PF00557 Metallopeptidase family M24 SVI_RS04025 PF01321 Creatinase/Prolidase N-terminal domain SVI_RS04030 PF00704 Glycosyl hydrolases family 18 SVI_RS04030 PF08329 Chitinase A, N-terminal domain SVI_RS04040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS04040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SVI_RS04045 PF02368 Bacterial Ig-like domain (group 2) SVI_RS04045 PF11999 Protein of unknown function (DUF3494) SVI_RS04095 PF00553 Cellulose binding domain SVI_RS04095 PF00041 Fibronectin type III domain SVI_RS04095 PF01341 Glycosyl hydrolases family 6 SVI_RS04115 PF00331 Glycosyl hydrolase family 10 SVI_RS04115 PF00150 Cellulase (glycosyl hydrolase family 5) SVI_RS04115 PF00942 Cellulose binding domain SVI_RS04120 PF00041 Fibronectin type III domain SVI_RS04120 PF00553 Cellulose binding domain SVI_RS04120 PF01341 Glycosyl hydrolases family 6 SVI_RS04130 PF03979 Sigma-70 factor, region 1.1 SVI_RS04130 PF00140 Sigma-70 factor, region 1.2 SVI_RS04130 PF04542 Sigma-70 region 2 SVI_RS04130 PF04539 Sigma-70 region 3 SVI_RS04130 PF04545 Sigma-70, region 4 SVI_RS04130 PF04546 Sigma-70, non-essential region SVI_RS04135 PF01807 CHC2 zinc finger SVI_RS04135 PF08275 DNA primase catalytic core, N-terminal domain SVI_RS04135 PF08278 DNA primase DnaG DnaB-binding SVI_RS04135 PF10410 DnaB-helicase binding domain of primase SVI_RS04140 PF09424 Yqey-like protein SVI_RS04145 PF01165 Ribosomal protein S21 SVI_RS04150 PF00814 Glycoprotease family SVI_RS04155 PF02660 Glycerol-3-phosphate acyltransferase SVI_RS04160 PF02152 Dihydroneopterin aldolase SVI_RS04165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SVI_RS04170 PF02673 Bacitracin resistance protein BacA SVI_RS04175 PF13847 Methyltransferase domain SVI_RS04180 PF03734 L,D-transpeptidase catalytic domain SVI_RS04180 PF17969 L,D-transpeptidase C-terminal domain SVI_RS04180 PF01476 LysM domain SVI_RS04190 PF01966 HD domain SVI_RS04190 PF01743 Poly A polymerase head domain SVI_RS04190 PF12627 Probable RNA and SrmB- binding site of polymerase A SVI_RS04195 PF01471 Putative peptidoglycan binding domain SVI_RS04195 PF13401 AAA domain SVI_RS04205 PF03600 Citrate transporter SVI_RS04215 PF00202 Aminotransferase class-III SVI_RS04220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SVI_RS04220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SVI_RS04225 PF00654 Voltage gated chloride channel SVI_RS04235 PF01521 Iron-sulphur cluster biosynthesis SVI_RS04250 PF00230 Major intrinsic protein SVI_RS04255 PF03702 Anhydro-N-acetylmuramic acid kinase SVI_RS04260 PF01464 Transglycosylase SLT domain SVI_RS04260 PF01551 Peptidase family M23 SVI_RS04260 PF10145 Phage-related minor tail protein SVI_RS04265 PF00579 tRNA synthetases class I (W and Y) SVI_RS04270 PF00854 POT family SVI_RS04280 PF03458 UPF0126 domain SVI_RS04295 PF01048 Phosphorylase superfamily SVI_RS04300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SVI_RS04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS04305 PF01493 GXGXG motif SVI_RS04305 PF04898 Glutamate synthase central domain SVI_RS04305 PF01645 Conserved region in glutamate synthase SVI_RS04305 PF00310 Glutamine amidotransferases class-II SVI_RS04310 PF04055 Radical SAM superfamily SVI_RS04310 PF16199 Radical_SAM C-terminal domain SVI_RS04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS04315 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS04315 PF01627 Hpt domain SVI_RS04315 PF00989 PAS fold SVI_RS04315 PF00072 Response regulator receiver domain SVI_RS04315 PF18415 Histidine kinase receptor ArcB trans-membrane domain SVI_RS04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS04320 PF03466 LysR substrate binding domain SVI_RS04330 PF02976 DNA mismatch repair enzyme MutH SVI_RS04335 PF00293 NUDIX domain SVI_RS04340 PF05524 PEP-utilising enzyme, N-terminal SVI_RS04340 PF02896 PEP-utilising enzyme, TIM barrel domain SVI_RS04340 PF01590 GAF domain SVI_RS04340 PF00391 PEP-utilising enzyme, mobile domain SVI_RS04345 PF01925 Sulfite exporter TauE/SafE SVI_RS04350 PF00303 Thymidylate synthase SVI_RS04355 PF06965 Na+/H+ antiporter 1 SVI_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS04365 PF03466 LysR substrate binding domain SVI_RS04370 PF03937 Flavinator of succinate dehydrogenase SVI_RS04380 PF02910 Fumarate reductase flavoprotein C-term SVI_RS04380 PF00890 FAD binding domain SVI_RS04385 PF08281 Sigma-70, region 4 SVI_RS04385 PF04542 Sigma-70 region 2 SVI_RS04395 PF17188 MucB/RseB C-terminal domain SVI_RS04395 PF03888 MucB/RseB N-terminal domain SVI_RS04405 PF06421 GTP-binding protein LepA C-terminus SVI_RS04405 PF03144 Elongation factor Tu domain 2 SVI_RS04405 PF00009 Elongation factor Tu GTP binding domain SVI_RS04405 PF00679 Elongation factor G C-terminus SVI_RS04410 PF10502 Signal peptidase, peptidase S26 SVI_RS04415 PF00035 Double-stranded RNA binding motif SVI_RS04415 PF14622 Ribonuclease-III-like SVI_RS04420 PF01926 50S ribosome-binding GTPase SVI_RS04420 PF07650 KH domain SVI_RS04425 PF02565 Recombination protein O C terminal SVI_RS04425 PF11967 Recombination protein O N terminal SVI_RS04430 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SVI_RS04435 PF01648 4'-phosphopantetheinyl transferase superfamily SVI_RS04440 PF04055 Radical SAM superfamily SVI_RS04440 PF00919 Uncharacterized protein family UPF0004 SVI_RS04440 PF01938 TRAM domain SVI_RS04450 PF00664 ABC transporter transmembrane region SVI_RS04450 PF00005 ABC transporter SVI_RS04450 PF03412 Peptidase C39 family SVI_RS04485 PF03466 LysR substrate binding domain SVI_RS04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS04490 PF00571 CBS domain SVI_RS04490 PF03471 Transporter associated domain SVI_RS04490 PF01595 Cyclin M transmembrane N-terminal domain SVI_RS04495 PF01578 Cytochrome C assembly protein SVI_RS04500 PF02881 SRP54-type protein, helical bundle domain SVI_RS04500 PF02978 Signal peptide binding domain SVI_RS04500 PF00448 SRP54-type protein, GTPase domain SVI_RS04505 PF00886 Ribosomal protein S16 SVI_RS04510 PF01782 RimM N-terminal domain SVI_RS04510 PF05239 PRC-barrel domain SVI_RS04515 PF01746 tRNA (Guanine-1)-methyltransferase SVI_RS04520 PF01245 Ribosomal protein L19 SVI_RS04525 PF00793 DAHP synthetase I family SVI_RS04530 PF01817 Chorismate mutase type II SVI_RS04530 PF02153 Prephenate dehydrogenase SVI_RS04535 PF03063 Prismane/CO dehydrogenase family SVI_RS04540 PF00175 Oxidoreductase NAD-binding domain SVI_RS04540 PF00970 Oxidoreductase FAD-binding domain SVI_RS04540 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS04550 PF00800 Prephenate dehydratase SVI_RS04550 PF01817 Chorismate mutase type II SVI_RS04555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SVI_RS04565 PF01322 Cytochrome C' SVI_RS04570 PF01371 Trp repressor protein SVI_RS04580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS04585 PF03447 Homoserine dehydrogenase, NAD binding domain SVI_RS04585 PF00696 Amino acid kinase family SVI_RS04585 PF01842 ACT domain SVI_RS04585 PF13840 ACT domain SVI_RS04585 PF00742 Homoserine dehydrogenase SVI_RS04590 PF00288 GHMP kinases N terminal domain SVI_RS04590 PF08544 GHMP kinases C terminal SVI_RS04595 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS04595 PF14821 Threonine synthase N terminus SVI_RS04600 PF01261 Xylose isomerase-like TIM barrel SVI_RS04605 PF00072 Response regulator receiver domain SVI_RS04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS04605 PF13426 PAS domain SVI_RS04610 PF00486 Transcriptional regulatory protein, C terminal SVI_RS04610 PF00072 Response regulator receiver domain SVI_RS04625 PF00342 Phosphoglucose isomerase SVI_RS04630 PF00923 Transaldolase/Fructose-6-phosphate aldolase SVI_RS04635 PF00691 OmpA family SVI_RS04640 PF09363 XFP C-terminal domain SVI_RS04640 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SVI_RS04640 PF09364 XFP N-terminal domain SVI_RS04645 PF01235 Sodium:alanine symporter family SVI_RS04650 PF03883 Peroxide stress protein YaaA SVI_RS04660 PF03741 Integral membrane protein TerC family SVI_RS04675 PF01022 Bacterial regulatory protein, arsR family SVI_RS04680 PF01649 Ribosomal protein S20 SVI_RS04685 PF03023 Lipid II flippase MurJ SVI_RS04690 PF06574 FAD synthetase SVI_RS04690 PF01687 Riboflavin kinase SVI_RS04695 PF00133 tRNA synthetases class I (I, L, M and V) SVI_RS04695 PF08264 Anticodon-binding domain of tRNA SVI_RS04695 PF06827 Zinc finger found in FPG and IleRS SVI_RS04700 PF01252 Signal peptidase (SPase) II SVI_RS04705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS04710 PF02401 LytB protein SVI_RS04735 PF07963 Prokaryotic N-terminal methylation motif SVI_RS04735 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor SVI_RS04755 PF00543 Nitrogen regulatory protein P-II SVI_RS04760 PF00356 Bacterial regulatory proteins, lacI family SVI_RS04770 PF04820 Tryptophan halogenase SVI_RS04785 PF00728 Glycosyl hydrolase family 20, catalytic domain SVI_RS04785 PF03173 Putative carbohydrate binding domain SVI_RS04785 PF02838 Glycosyl hydrolase family 20, domain 2 SVI_RS04790 PF01869 BadF/BadG/BcrA/BcrD ATPase family SVI_RS04795 PF01979 Amidohydrolase family SVI_RS04825 PF01292 Prokaryotic cytochrome b561 SVI_RS04830 PF04264 YceI-like domain SVI_RS04835 PF04362 Bacterial Fe(2+) trafficking SVI_RS04840 PF00730 HhH-GPD superfamily base excision DNA repair protein SVI_RS04840 PF10576 Iron-sulfur binding domain of endonuclease III SVI_RS04840 PF00633 Helix-hairpin-helix motif SVI_RS04840 PF14815 NUDIX domain SVI_RS04845 PF02390 Putative methyltransferase SVI_RS04850 PF04320 Protein with unknown function (DUF469) SVI_RS04855 PF04960 Glutaminase SVI_RS04865 PF03466 LysR substrate binding domain SVI_RS04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS04875 PF06969 HemN C-terminal domain SVI_RS04875 PF04055 Radical SAM superfamily SVI_RS04880 PF01725 Ham1 family SVI_RS04890 PF02594 Uncharacterised ACR, YggU family COG1872 SVI_RS04895 PF02325 YGGT family SVI_RS04900 PF14748 Pyrroline-5-carboxylate reductase dimerisation SVI_RS04900 PF03807 NADP oxidoreductase coenzyme F420-dependent SVI_RS04905 PF01168 Alanine racemase, N-terminal domain SVI_RS04910 PF00437 Type II/IV secretion system protein SVI_RS04915 PF00437 Type II/IV secretion system protein SVI_RS04925 PF03652 Holliday junction resolvase SVI_RS04930 PF02622 Uncharacterized ACR, COG1678 SVI_RS04935 PF01253 Translation initiation factor SUI1 SVI_RS04955 PF01389 OmpA-like transmembrane domain SVI_RS04955 PF00691 OmpA family SVI_RS04960 PF00924 Mechanosensitive ion channel SVI_RS04960 PF05552 Conserved TM helix SVI_RS04965 PF03458 UPF0126 domain SVI_RS04970 PF01212 Beta-eliminating lyase SVI_RS04980 PF00245 Alkaline phosphatase SVI_RS04985 PF00245 Alkaline phosphatase SVI_RS04990 PF02028 BCCT, betaine/carnitine/choline family transporter SVI_RS05010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS05010 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS05015 PF00873 AcrB/AcrD/AcrF family SVI_RS05020 PF00999 Sodium/hydrogen exchanger family SVI_RS05025 PF05525 Branched-chain amino acid transport protein SVI_RS05030 PF00465 Iron-containing alcohol dehydrogenase SVI_RS05035 PF02446 4-alpha-glucanotransferase SVI_RS05040 PF02806 Alpha amylase, C-terminal all-beta domain SVI_RS05040 PF00128 Alpha amylase, catalytic domain SVI_RS05040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SVI_RS05045 PF00128 Alpha amylase, catalytic domain SVI_RS05045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SVI_RS05050 PF00343 Carbohydrate phosphorylase SVI_RS05055 PF00483 Nucleotidyl transferase SVI_RS05060 PF00534 Glycosyl transferases group 1 SVI_RS05060 PF08323 Starch synthase catalytic domain SVI_RS05070 PF08453 Peptidase family M9 N-terminal SVI_RS05070 PF01752 Collagenase SVI_RS05075 PF00255 Glutathione peroxidase SVI_RS05080 PF17152 Periplasmic sensor domain SVI_RS05080 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS05090 PF01189 16S rRNA methyltransferase RsmB/F SVI_RS05090 PF01029 NusB family SVI_RS05100 PF04266 ASCH domain SVI_RS05105 PF07690 Major Facilitator Superfamily SVI_RS05110 PF01752 Collagenase SVI_RS05110 PF18496 Collagenase G catalytic helper subdomain SVI_RS05110 PF08453 Peptidase family M9 N-terminal SVI_RS05140 PF04972 BON domain SVI_RS05140 PF13629 Pilus formation protein N terminal region SVI_RS05140 PF00263 Bacterial type II and III secretion system protein SVI_RS05155 PF00437 Type II/IV secretion system protein SVI_RS05210 PF02683 Cytochrome C biogenesis protein transmembrane region SVI_RS05210 PF11412 Disulphide bond corrector protein DsbC SVI_RS05220 PF00595 PDZ domain SVI_RS05220 PF03572 Peptidase family S41 SVI_RS05230 PF01513 ATP-NAD kinase SVI_RS05235 PF01025 GrpE SVI_RS05240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SVI_RS05240 PF02779 Transketolase, pyrimidine binding domain SVI_RS05240 PF02780 Transketolase, C-terminal domain SVI_RS05245 PF00348 Polyprenyl synthetase SVI_RS05250 PF02609 Exonuclease VII small subunit SVI_RS05255 PF01618 MotA/TolQ/ExbB proton channel family SVI_RS05260 PF00691 OmpA family SVI_RS05260 PF13677 Membrane MotB of proton-channel complex MotA/MotB SVI_RS05265 PF02926 THUMP domain SVI_RS05265 PF02568 Thiamine biosynthesis protein (ThiI) SVI_RS05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS05280 PF03466 LysR substrate binding domain SVI_RS05290 PF04241 Protein of unknown function (DUF423) SVI_RS05295 PF18125 RlmM ferredoxin-like domain SVI_RS05295 PF01728 FtsJ-like methyltransferase SVI_RS05300 PF18324 Hypothetical protein TT1725 SVI_RS05300 PF00180 Isocitrate/isopropylmalate dehydrogenase SVI_RS05305 PF07676 WD40-like Beta Propeller Repeat SVI_RS05305 PF00326 Prolyl oligopeptidase family SVI_RS05310 PF13417 Glutathione S-transferase, N-terminal domain SVI_RS05315 PF01914 MarC family integral membrane protein SVI_RS05320 PF04191 Phospholipid methyltransferase SVI_RS05325 PF03992 Antibiotic biosynthesis monooxygenase SVI_RS05335 PF13302 Acetyltransferase (GNAT) domain SVI_RS05350 PF01367 5'-3' exonuclease, C-terminal SAM fold SVI_RS05350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SVI_RS05355 PF11892 Domain of unknown function (DUF3412) SVI_RS05355 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SVI_RS05355 PF03641 Possible lysine decarboxylase SVI_RS05360 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS05375 PF04381 Putative exonuclease, RdgC SVI_RS05380 PF00267 Gram-negative porin SVI_RS05385 PF00486 Transcriptional regulatory protein, C terminal SVI_RS05385 PF00072 Response regulator receiver domain SVI_RS05390 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS05390 PF00989 PAS fold SVI_RS05390 PF11808 Phosphate regulon sensor protein PhoR SVI_RS05395 PF12849 PBP superfamily domain SVI_RS05430 PF08453 Peptidase family M9 N-terminal SVI_RS05430 PF01752 Collagenase SVI_RS05435 PF01433 Peptidase family M1 domain SVI_RS05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS05445 PF03466 LysR substrate binding domain SVI_RS05450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS05450 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS05465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS05470 PF00873 AcrB/AcrD/AcrF family SVI_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS05490 PF00486 Transcriptional regulatory protein, C terminal SVI_RS05490 PF00072 Response regulator receiver domain SVI_RS05505 PF00593 TonB dependent receptor SVI_RS05505 PF07715 TonB-dependent Receptor Plug Domain SVI_RS05510 PF01546 Peptidase family M20/M25/M40 SVI_RS05510 PF07687 Peptidase dimerisation domain SVI_RS05515 PF02627 Carboxymuconolactone decarboxylase family SVI_RS05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS05520 PF03466 LysR substrate binding domain SVI_RS05560 PF00313 'Cold-shock' DNA-binding domain SVI_RS05565 PF00313 'Cold-shock' DNA-binding domain SVI_RS05600 PF03060 Nitronate monooxygenase SVI_RS05600 PF00698 Acyl transferase domain SVI_RS05605 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS05605 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS05605 PF08659 KR domain SVI_RS05605 PF00550 Phosphopantetheine attachment site SVI_RS05605 PF16197 Ketoacyl-synthetase C-terminal extension SVI_RS05605 PF00698 Acyl transferase domain SVI_RS05615 PF00550 Phosphopantetheine attachment site SVI_RS05615 PF08659 KR domain SVI_RS05615 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS05615 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS05615 PF14765 Polyketide synthase dehydratase SVI_RS05615 PF00698 Acyl transferase domain SVI_RS05615 PF16197 Ketoacyl-synthetase C-terminal extension SVI_RS05615 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS05625 PF00679 Elongation factor G C-terminus SVI_RS05625 PF14492 Elongation Factor G, domain II SVI_RS05625 PF03764 Elongation factor G, domain IV SVI_RS05625 PF00009 Elongation factor Tu GTP binding domain SVI_RS05635 PF01648 4'-phosphopantetheinyl transferase superfamily SVI_RS05650 PF00753 Metallo-beta-lactamase superfamily SVI_RS05650 PF14863 Alkyl sulfatase dimerisation SVI_RS05650 PF14864 Alkyl sulfatase C-terminal SVI_RS05655 PF03466 LysR substrate binding domain SVI_RS05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS05660 PF14489 QueF-like protein SVI_RS05660 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SVI_RS05665 PF07348 Syd protein (SUKH-2) SVI_RS05670 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) SVI_RS05710 PF04287 tRNA pseudouridine synthase C SVI_RS05715 PF00849 RNA pseudouridylate synthase SVI_RS05725 PF00258 Flavodoxin SVI_RS05730 PF01842 ACT domain SVI_RS05730 PF00551 Formyl transferase SVI_RS05745 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS05745 PF14602 Hexapeptide repeat of succinyl-transferase SVI_RS05745 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SVI_RS05750 PF08335 GlnD PII-uridylyltransferase SVI_RS05750 PF01966 HD domain SVI_RS05750 PF01909 Nucleotidyltransferase domain SVI_RS05750 PF01842 ACT domain SVI_RS05755 PF00557 Metallopeptidase family M24 SVI_RS05760 PF00318 Ribosomal protein S2 SVI_RS05765 PF00889 Elongation factor TS SVI_RS05770 PF00696 Amino acid kinase family SVI_RS05775 PF01765 Ribosome recycling factor SVI_RS05780 PF01255 Putative undecaprenyl diphosphate synthase SVI_RS05790 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SVI_RS05790 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SVI_RS05790 PF13288 DXP reductoisomerase C-terminal domain SVI_RS05800 PF01103 Surface antigen SVI_RS05800 PF07244 Surface antigen variable number repeat SVI_RS05805 PF03938 Outer membrane protein (OmpH-like) SVI_RS05810 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS05810 PF14602 Hexapeptide repeat of succinyl-transferase SVI_RS05810 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SVI_RS05815 PF07977 FabA-like domain SVI_RS05820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SVI_RS05820 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS05825 PF02684 Lipid-A-disaccharide synthetase SVI_RS05830 PF01351 Ribonuclease HII SVI_RS05835 PF14579 Helix-hairpin-helix motif SVI_RS05835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SVI_RS05835 PF07733 Bacterial DNA polymerase III alpha NTPase domain SVI_RS05835 PF01336 OB-fold nucleic acid binding domain SVI_RS05835 PF02811 PHP domain SVI_RS05840 PF09179 TilS substrate binding domain SVI_RS05840 PF11734 TilS substrate C-terminal domain SVI_RS05840 PF01171 PP-loop family SVI_RS05845 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS05845 PF17151 Periplasmic sensor domain SVI_RS05850 PF02254 TrkA-N domain SVI_RS05850 PF02080 TrkA-C domain SVI_RS05850 PF00999 Sodium/hydrogen exchanger family SVI_RS05860 PF00877 NlpC/P60 family SVI_RS05860 PF01476 LysM domain SVI_RS05870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SVI_RS05870 PF03129 Anticodon binding domain SVI_RS05870 PF04073 Aminoacyl-tRNA editing domain SVI_RS05880 PF01757 Acyltransferase family SVI_RS05885 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS05890 PF18389 TrmO C-terminal domain SVI_RS05890 PF01980 tRNA-methyltransferase O SVI_RS05905 PF01012 Electron transfer flavoprotein domain SVI_RS05910 PF01012 Electron transfer flavoprotein domain SVI_RS05910 PF00766 Electron transfer flavoprotein FAD-binding domain SVI_RS05915 PF03553 Na+/H+ antiporter family SVI_RS05920 PF00265 Thymidine kinase SVI_RS05930 PF08534 Redoxin SVI_RS05935 PF01144 Coenzyme A transferase SVI_RS05940 PF01144 Coenzyme A transferase SVI_RS05945 PF00682 HMGL-like SVI_RS05965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS05965 PF18140 Propionyl-coenzyme A carboxylase BT domain SVI_RS05965 PF00364 Biotin-requiring enzyme SVI_RS05965 PF02785 Biotin carboxylase C-terminal domain SVI_RS05965 PF00289 Biotin carboxylase, N-terminal domain SVI_RS05970 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS05975 PF01039 Carboxyl transferase domain SVI_RS05980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS05980 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS05980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS05985 PF00376 MerR family regulatory protein SVI_RS05985 PF09278 MerR, DNA binding SVI_RS05990 PF12833 Helix-turn-helix domain SVI_RS05995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS05995 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS06000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS06005 PF03466 LysR substrate binding domain SVI_RS06010 PF02254 TrkA-N domain SVI_RS06010 PF00999 Sodium/hydrogen exchanger family SVI_RS06015 PF02525 Flavodoxin-like fold SVI_RS06025 PF03831 PhnA domain SVI_RS06025 PF08274 PhnA Zinc-Ribbon SVI_RS06030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SVI_RS06035 PF00375 Sodium:dicarboxylate symporter family SVI_RS06065 PF10689 Protein of unknown function (DUF2496) SVI_RS06080 PF01638 HxlR-like helix-turn-helix SVI_RS06085 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS06085 PF03707 Bacterial signalling protein N terminal repeat SVI_RS06085 PF00563 EAL domain SVI_RS06095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS06095 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS06095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS06095 PF09317 Domain of unknown function (DUF1974) SVI_RS06105 PF07715 TonB-dependent Receptor Plug Domain SVI_RS06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS06145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SVI_RS06145 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS06145 PF00672 HAMP domain SVI_RS06145 PF00072 Response regulator receiver domain SVI_RS06145 PF01627 Hpt domain SVI_RS06150 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS06150 PF00072 Response regulator receiver domain SVI_RS06155 PF00072 Response regulator receiver domain SVI_RS06170 PF02566 OsmC-like protein SVI_RS06195 PF04002 RadC-like JAB domain SVI_RS06200 PF05930 Prophage CP4-57 regulatory protein (AlpA) SVI_RS06205 PF12327 FtsZ family, C-terminal domain SVI_RS06205 PF00091 Tubulin/FtsZ family, GTPase domain SVI_RS06215 PF00072 Response regulator receiver domain SVI_RS06215 PF02954 Bacterial regulatory protein, Fis family SVI_RS06215 PF00158 Sigma-54 interaction domain SVI_RS06220 PF07728 AAA domain (dynein-related subfamily) SVI_RS06220 PF17868 AAA lid domain SVI_RS06220 PF12592 Protein of unknown function (DUF3763) SVI_RS06225 PF05762 VWA domain containing CoxE-like protein SVI_RS06235 PF12728 Helix-turn-helix domain SVI_RS06265 PF01668 SmpB protein SVI_RS06270 PF03364 Polyketide cyclase / dehydrase and lipid transport SVI_RS06275 PF03658 RnfH family Ubiquitin SVI_RS06280 PF04355 SmpA / OmlA family SVI_RS06310 PF06167 Glucose-regulated metallo-peptidase M90 SVI_RS06325 PF12843 Putative quorum-sensing-regulated virulence factor SVI_RS06345 PF00571 CBS domain SVI_RS06345 PF01595 Cyclin M transmembrane N-terminal domain SVI_RS06350 PF04055 Radical SAM superfamily SVI_RS06360 PF13464 Domain of unknown function (DUF4115) SVI_RS06365 PF04551 GcpE protein SVI_RS06370 PF03129 Anticodon binding domain SVI_RS06370 PF13393 Histidyl-tRNA synthetase SVI_RS06375 PF09976 Tetratricopeptide repeat-like domain SVI_RS06380 PF13360 PQQ-like domain SVI_RS06385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SVI_RS06385 PF01926 50S ribosome-binding GTPase SVI_RS06395 PF00478 IMP dehydrogenase / GMP reductase domain SVI_RS06395 PF00571 CBS domain SVI_RS06400 PF00958 GMP synthase C terminal domain SVI_RS06400 PF02540 NAD synthase SVI_RS06400 PF00117 Glutamine amidotransferase class-I SVI_RS06405 PF14437 MafB19-like deaminase SVI_RS06410 PF00497 Bacterial extracellular solute-binding proteins, family 3 SVI_RS06410 PF01464 Transglycosylase SLT domain SVI_RS06415 PF02769 AIR synthase related protein, C-terminal domain SVI_RS06415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SVI_RS06415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SVI_RS06420 PF01654 Cytochrome bd terminal oxidase subunit I SVI_RS06425 PF02322 Cytochrome bd terminal oxidase subunit II SVI_RS06435 PF00873 AcrB/AcrD/AcrF family SVI_RS06465 PF00593 TonB dependent receptor SVI_RS06465 PF07715 TonB-dependent Receptor Plug Domain SVI_RS06515 PF01584 CheW-like domain SVI_RS06515 PF00072 Response regulator receiver domain SVI_RS06520 PF03705 CheR methyltransferase, all-alpha domain SVI_RS06520 PF01739 CheR methyltransferase, SAM binding domain SVI_RS06525 PF00460 Flagella basal body rod protein SVI_RS06530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06530 PF00460 Flagella basal body rod protein SVI_RS06535 PF03963 Flagellar hook capping protein - N-terminal region SVI_RS06540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06540 PF07559 Flagellar basal body protein FlaE SVI_RS06540 PF00460 Flagella basal body rod protein SVI_RS06545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06545 PF00460 Flagella basal body rod protein SVI_RS06545 PF07559 Flagellar basal body protein FlaE SVI_RS06550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06550 PF00460 Flagella basal body rod protein SVI_RS06555 PF00460 Flagella basal body rod protein SVI_RS06555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06560 PF02107 Flagellar L-ring protein SVI_RS06565 PF02119 Flagellar P-ring protein SVI_RS06570 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SVI_RS06570 PF10135 Rod binding protein SVI_RS06575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SVI_RS06575 PF07196 Flagellin hook IN motif SVI_RS06580 PF00700 Bacterial flagellin C-terminal helical region SVI_RS06580 PF00669 Bacterial flagellin N-terminal helical region SVI_RS06585 PF00700 Bacterial flagellin C-terminal helical region SVI_RS06585 PF00669 Bacterial flagellin N-terminal helical region SVI_RS06585 PF07196 Flagellin hook IN motif SVI_RS06590 PF07196 Flagellin hook IN motif SVI_RS06590 PF00669 Bacterial flagellin N-terminal helical region SVI_RS06590 PF00700 Bacterial flagellin C-terminal helical region SVI_RS06600 PF02465 Flagellar hook-associated protein 2 N-terminus SVI_RS06600 PF07195 Flagellar hook-associated protein 2 C-terminus SVI_RS06600 PF07196 Flagellin hook IN motif SVI_RS06610 PF02561 Flagellar protein FliS SVI_RS06615 PF00158 Sigma-54 interaction domain SVI_RS06615 PF02954 Bacterial regulatory protein, Fis family SVI_RS06615 PF06490 Flagellar regulatory protein FleQ SVI_RS06620 PF13188 PAS domain SVI_RS06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS06620 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS06625 PF00072 Response regulator receiver domain SVI_RS06625 PF02954 Bacterial regulatory protein, Fis family SVI_RS06625 PF00158 Sigma-54 interaction domain SVI_RS06630 PF02049 Flagellar hook-basal body complex protein FliE SVI_RS06635 PF08345 Flagellar M-ring protein C-terminal SVI_RS06635 PF01514 Secretory protein of YscJ/FliF family SVI_RS06640 PF14842 FliG N-terminal domain SVI_RS06640 PF14841 FliG middle domain SVI_RS06640 PF01706 FliG C-terminal domain SVI_RS06650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SVI_RS06650 PF18269 T3SS EscN ATPase C-terminal domain SVI_RS06670 PF02154 Flagellar motor switch protein FliM SVI_RS06670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SVI_RS06675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SVI_RS06680 PF04347 Flagellar biosynthesis protein, FliO SVI_RS06685 PF00813 FliP family SVI_RS06690 PF01313 Bacterial export proteins, family 3 SVI_RS06695 PF01311 Bacterial export proteins, family 1 SVI_RS06700 PF01312 FlhB HrpN YscU SpaS Family SVI_RS06705 PF00771 FHIPEP family SVI_RS06710 PF00448 SRP54-type protein, GTPase domain SVI_RS06715 PF10609 NUBPL iron-transfer P-loop NTPase SVI_RS06720 PF04542 Sigma-70 region 2 SVI_RS06720 PF04539 Sigma-70 region 3 SVI_RS06720 PF04545 Sigma-70, region 4 SVI_RS06725 PF00072 Response regulator receiver domain SVI_RS06730 PF04344 Chemotaxis phosphatase, CheZ SVI_RS06735 PF00072 Response regulator receiver domain SVI_RS06735 PF01584 CheW-like domain SVI_RS06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS06735 PF02895 Signal transducing histidine kinase, homodimeric domain SVI_RS06735 PF01627 Hpt domain SVI_RS06740 PF01339 CheB methylesterase SVI_RS06740 PF00072 Response regulator receiver domain SVI_RS06750 PF13614 AAA domain SVI_RS06760 PF01584 CheW-like domain SVI_RS06780 PF04333 MlaA lipoprotein SVI_RS06785 PF00072 Response regulator receiver domain SVI_RS06790 PF00854 POT family SVI_RS06815 PF00293 NUDIX domain SVI_RS06820 PF00483 Nucleotidyl transferase SVI_RS06820 PF01050 Mannose-6-phosphate isomerase SVI_RS06825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS06825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS06825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS06825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS06830 PF16363 GDP-mannose 4,6 dehydratase SVI_RS06840 PF01943 Polysaccharide biosynthesis protein SVI_RS06840 PF14667 Polysaccharide biosynthesis C-terminal domain SVI_RS06845 PF00535 Glycosyl transferase family 2 SVI_RS06855 PF16363 GDP-mannose 4,6 dehydratase SVI_RS06860 PF16363 GDP-mannose 4,6 dehydratase SVI_RS06865 PF01370 NAD dependent epimerase/dehydratase family SVI_RS06870 PF16363 GDP-mannose 4,6 dehydratase SVI_RS06875 PF00483 Nucleotidyl transferase SVI_RS06880 PF05523 WxcM-like, C-terminal SVI_RS06885 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS06890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SVI_RS06910 PF00535 Glycosyl transferase family 2 SVI_RS06915 PF00535 Glycosyl transferase family 2 SVI_RS06920 PF01370 NAD dependent epimerase/dehydratase family SVI_RS06925 PF02397 Bacterial sugar transferase SVI_RS06935 PF01370 NAD dependent epimerase/dehydratase family SVI_RS06940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SVI_RS06940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SVI_RS06940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SVI_RS06945 PF02719 Polysaccharide biosynthesis protein SVI_RS06950 PF00483 Nucleotidyl transferase SVI_RS06955 PF01507 Phosphoadenosine phosphosulfate reductase family SVI_RS06965 PF00009 Elongation factor Tu GTP binding domain SVI_RS06970 PF02080 TrkA-C domain SVI_RS06970 PF03600 Citrate transporter SVI_RS06995 PF02397 Bacterial sugar transferase SVI_RS07000 PF00535 Glycosyl transferase family 2 SVI_RS07020 PF01740 STAS domain SVI_RS07030 PF00072 Response regulator receiver domain SVI_RS07030 PF00486 Transcriptional regulatory protein, C terminal SVI_RS07040 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS07040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SVI_RS07040 PF00072 Response regulator receiver domain SVI_RS07040 PF01627 Hpt domain SVI_RS07040 PF00672 HAMP domain SVI_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS07045 PF00072 Response regulator receiver domain SVI_RS07045 PF02954 Bacterial regulatory protein, Fis family SVI_RS07045 PF00158 Sigma-54 interaction domain SVI_RS07055 PF04820 Tryptophan halogenase SVI_RS07060 PF04820 Tryptophan halogenase SVI_RS07070 PF00356 Bacterial regulatory proteins, lacI family SVI_RS07080 PF00232 Glycosyl hydrolase family 1 SVI_RS07085 PF07690 Major Facilitator Superfamily SVI_RS07090 PF00480 ROK family SVI_RS07095 PF02698 DUF218 domain SVI_RS07110 PF12800 4Fe-4S binding domain SVI_RS07110 PF00037 4Fe-4S binding domain SVI_RS07110 PF13187 4Fe-4S dicluster domain SVI_RS07115 PF16363 GDP-mannose 4,6 dehydratase SVI_RS07120 PF00483 Nucleotidyl transferase SVI_RS07125 PF00351 Biopterin-dependent aromatic amino acid hydroxylase SVI_RS07130 PF01329 Pterin 4 alpha carbinolamine dehydratase SVI_RS07135 PF00158 Sigma-54 interaction domain SVI_RS07135 PF18024 Helix-turn-helix domain SVI_RS07145 PF02798 Glutathione S-transferase, N-terminal domain SVI_RS07145 PF14497 Glutathione S-transferase, C-terminal domain SVI_RS07150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS07155 PF03466 LysR substrate binding domain SVI_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS07160 PF07690 Major Facilitator Superfamily SVI_RS07165 PF07690 Major Facilitator Superfamily SVI_RS07215 PF00749 tRNA synthetases class I (E and Q), catalytic domain SVI_RS07270 PF00005 ABC transporter SVI_RS07270 PF00664 ABC transporter transmembrane region SVI_RS07275 PF12833 Helix-turn-helix domain SVI_RS07280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SVI_RS07280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SVI_RS07285 PF00271 Helicase conserved C-terminal domain SVI_RS07285 PF00270 DEAD/DEAH box helicase SVI_RS07295 PF01584 CheW-like domain SVI_RS07295 PF00072 Response regulator receiver domain SVI_RS07300 PF00375 Sodium:dicarboxylate symporter family SVI_RS07310 PF13439 Glycosyltransferase Family 4 SVI_RS07310 PF00534 Glycosyl transferases group 1 SVI_RS07320 PF13439 Glycosyltransferase Family 4 SVI_RS07370 PF00534 Glycosyl transferases group 1 SVI_RS07370 PF13439 Glycosyltransferase Family 4 SVI_RS07375 PF00535 Glycosyl transferase family 2 SVI_RS07385 PF01966 HD domain SVI_RS07385 PF08335 GlnD PII-uridylyltransferase SVI_RS07385 PF01909 Nucleotidyltransferase domain SVI_RS07390 PF00534 Glycosyl transferases group 1 SVI_RS07390 PF13439 Glycosyltransferase Family 4 SVI_RS07395 PF01757 Acyltransferase family SVI_RS07405 PF00849 RNA pseudouridylate synthase SVI_RS07415 PF02547 Queuosine biosynthesis protein SVI_RS07420 PF01702 Queuine tRNA-ribosyltransferase SVI_RS07425 PF02699 Preprotein translocase subunit SVI_RS07430 PF07549 SecD/SecF GG Motif SVI_RS07430 PF02355 Protein export membrane protein SVI_RS07430 PF13721 SecD export protein N-terminal TM region SVI_RS07435 PF02355 Protein export membrane protein SVI_RS07435 PF07549 SecD/SecF GG Motif SVI_RS07445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SVI_RS07445 PF10414 Sirohaem synthase dimerisation region SVI_RS07450 PF07152 YaeQ protein SVI_RS07465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SVI_RS07475 PF00459 Inositol monophosphatase family SVI_RS07480 PF00588 SpoU rRNA Methylase family SVI_RS07485 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS07490 PF02082 Transcriptional regulator SVI_RS07495 PF00266 Aminotransferase class-V SVI_RS07500 PF01592 NifU-like N terminal domain SVI_RS07505 PF01521 Iron-sulphur cluster biosynthesis SVI_RS07510 PF07743 HSCB C-terminal oligomerisation domain SVI_RS07515 PF00012 Hsp70 protein SVI_RS07520 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS07525 PF04384 Iron-sulphur cluster assembly SVI_RS07530 PF00334 Nucleoside diphosphate kinase SVI_RS07535 PF00593 TonB dependent receptor SVI_RS07535 PF07715 TonB-dependent Receptor Plug Domain SVI_RS07560 PF13472 GDSL-like Lipase/Acylhydrolase family SVI_RS07565 PF00005 ABC transporter SVI_RS07575 PF01852 START domain SVI_RS07580 PF01370 NAD dependent epimerase/dehydratase family SVI_RS07580 PF08338 Domain of unknown function (DUF1731) SVI_RS07590 PF01594 AI-2E family transporter SVI_RS07595 PF10672 S-adenosylmethionine-dependent methyltransferase SVI_RS07595 PF17785 PUA-like domain SVI_RS07610 PF01515 Phosphate acetyl/butaryl transferase SVI_RS07610 PF07085 DRTGG domain SVI_RS07615 PF00871 Acetokinase family SVI_RS07620 PF04217 Protein of unknown function, DUF412 SVI_RS07625 PF04055 Radical SAM superfamily SVI_RS07630 PF01228 Glycine radical SVI_RS07630 PF02901 Pyruvate formate lyase-like SVI_RS07635 PF01226 Formate/nitrite transporter SVI_RS07640 PF00593 TonB dependent receptor SVI_RS07640 PF07715 TonB-dependent Receptor Plug Domain SVI_RS07655 PF00361 Proton-conducting membrane transporter SVI_RS07660 PF00361 Proton-conducting membrane transporter SVI_RS07665 PF00361 Proton-conducting membrane transporter SVI_RS07665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SVI_RS07670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SVI_RS07675 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SVI_RS07680 PF12838 4Fe-4S dicluster domain SVI_RS07685 PF00146 NADH dehydrogenase SVI_RS07690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SVI_RS07690 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SVI_RS07690 PF00384 Molybdopterin oxidoreductase SVI_RS07695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SVI_RS07695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SVI_RS07695 PF10531 SLBB domain SVI_RS07705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SVI_RS07705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SVI_RS07710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SVI_RS07715 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SVI_RS07720 PF00571 CBS domain SVI_RS07720 PF03061 Thioesterase superfamily SVI_RS07720 PF00392 Bacterial regulatory proteins, gntR family SVI_RS07720 PF07085 DRTGG domain SVI_RS07730 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS07740 PF00072 Response regulator receiver domain SVI_RS07740 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS07760 PF05199 GMC oxidoreductase SVI_RS07760 PF00732 GMC oxidoreductase SVI_RS07765 PF00171 Aldehyde dehydrogenase family SVI_RS07770 PF00440 Bacterial regulatory proteins, tetR family SVI_RS07770 PF13977 BetI-type transcriptional repressor, C-terminal SVI_RS07795 PF02463 RecF/RecN/SMC N terminal domain SVI_RS07795 PF06470 SMC proteins Flexible Hinge Domain SVI_RS07800 PF04354 ZipA, C-terminal FtsZ-binding domain SVI_RS07805 PF00533 BRCA1 C Terminus (BRCT) domain SVI_RS07805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SVI_RS07805 PF03120 NAD-dependent DNA ligase OB-fold domain SVI_RS07805 PF01653 NAD-dependent DNA ligase adenylation domain SVI_RS07805 PF12826 Helix-hairpin-helix motif SVI_RS07815 PF11871 Domain of unknown function (DUF3391) SVI_RS07815 PF01966 HD domain SVI_RS07820 PF01370 NAD dependent epimerase/dehydratase family SVI_RS07825 PF01323 DSBA-like thioredoxin domain SVI_RS07850 PF01638 HxlR-like helix-turn-helix SVI_RS07855 PF00171 Aldehyde dehydrogenase family SVI_RS07890 PF01979 Amidohydrolase family SVI_RS07900 PF00474 Sodium:solute symporter family SVI_RS07905 PF07969 Amidohydrolase family SVI_RS07910 PF00704 Glycosyl hydrolases family 18 SVI_RS07910 PF00041 Fibronectin type III domain SVI_RS07920 PF01380 SIS domain SVI_RS07920 PF00571 CBS domain SVI_RS07925 PF00929 Exonuclease SVI_RS07930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SVI_RS07930 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SVI_RS07930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SVI_RS07935 PF02233 NAD(P) transhydrogenase beta subunit SVI_RS07940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SVI_RS07940 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS07940 PF01799 [2Fe-2S] binding domain SVI_RS07940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SVI_RS07945 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS07945 PF01799 [2Fe-2S] binding domain SVI_RS07950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SVI_RS07950 PF00034 Cytochrome c SVI_RS07950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SVI_RS07970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SVI_RS07970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SVI_RS07975 PF00392 Bacterial regulatory proteins, gntR family SVI_RS07980 PF00171 Aldehyde dehydrogenase family SVI_RS07985 PF05544 Proline racemase SVI_RS07990 PF00701 Dihydrodipicolinate synthetase family SVI_RS07995 PF05544 Proline racemase SVI_RS08000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SVI_RS08000 PF01266 FAD dependent oxidoreductase SVI_RS08015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS08035 PF00440 Bacterial regulatory proteins, tetR family SVI_RS08045 PF00893 Small Multidrug Resistance protein SVI_RS08055 PF00557 Metallopeptidase family M24 SVI_RS08055 PF05195 Aminopeptidase P, N-terminal domain SVI_RS08075 PF01389 OmpA-like transmembrane domain SVI_RS08075 PF00691 OmpA family SVI_RS08115 PF01734 Patatin-like phospholipase SVI_RS08120 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SVI_RS08130 PF01544 CorA-like Mg2+ transporter protein SVI_RS08140 PF01966 HD domain SVI_RS08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS08155 PF00072 Response regulator receiver domain SVI_RS08155 PF00486 Transcriptional regulatory protein, C terminal SVI_RS08165 PF00005 ABC transporter SVI_RS08170 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS08180 PF01810 LysE type translocator SVI_RS08190 PF02540 NAD synthase SVI_RS08205 PF08207 Elongation factor P (EF-P) KOW-like domain SVI_RS08205 PF09285 Elongation factor P, C-terminal SVI_RS08205 PF01132 Elongation factor P (EF-P) OB domain SVI_RS08215 PF11893 Domain of unknown function (DUF3413) SVI_RS08215 PF00884 Sulfatase SVI_RS08220 PF07208 Protein of unknown function (DUF1414) SVI_RS08225 PF04245 37-kD nucleoid-associated bacterial protein SVI_RS08240 PF01551 Peptidase family M23 SVI_RS08240 PF01476 LysM domain SVI_RS08255 PF06185 YecM protein SVI_RS08265 PF00520 Ion transport protein SVI_RS08265 PF00027 Cyclic nucleotide-binding domain SVI_RS08270 PF01554 MatE SVI_RS08295 PF00970 Oxidoreductase FAD-binding domain SVI_RS08295 PF00042 Globin SVI_RS08295 PF00175 Oxidoreductase NAD-binding domain SVI_RS08300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS08300 PF18029 Glyoxalase-like domain SVI_RS08325 PF00733 Asparagine synthase SVI_RS08325 PF13537 Glutamine amidotransferase domain SVI_RS08330 PF04389 Peptidase family M28 SVI_RS08340 PF00551 Formyl transferase SVI_RS08345 PF00586 AIR synthase related protein, N-terminal domain SVI_RS08345 PF02769 AIR synthase related protein, C-terminal domain SVI_RS08355 PF03553 Na+/H+ antiporter family SVI_RS08355 PF13726 Na+-H+ antiporter family SVI_RS08360 PF10417 C-terminal domain of 1-Cys peroxiredoxin SVI_RS08360 PF00578 AhpC/TSA family SVI_RS08365 PF00929 Exonuclease SVI_RS08370 PF00691 OmpA family SVI_RS08370 PF18393 MotY N-terminal domain SVI_RS08375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SVI_RS08375 PF00326 Prolyl oligopeptidase family SVI_RS08380 PF03061 Thioesterase superfamily SVI_RS08385 PF01618 MotA/TolQ/ExbB proton channel family SVI_RS08390 PF02472 Biopolymer transport protein ExbD/TolR SVI_RS08400 PF04052 TolB amino-terminal domain SVI_RS08400 PF07676 WD40-like Beta Propeller Repeat SVI_RS08405 PF00691 OmpA family SVI_RS08410 PF16331 TolA binding protein trimerisation SVI_RS08410 PF13525 Outer membrane lipoprotein SVI_RS08465 PF00462 Glutaredoxin SVI_RS08475 PF04851 Type III restriction enzyme, res subunit SVI_RS08475 PF00271 Helicase conserved C-terminal domain SVI_RS08480 PF16177 Acetyl-coenzyme A synthetase N-terminus SVI_RS08480 PF00501 AMP-binding enzyme SVI_RS08480 PF13193 AMP-binding enzyme C-terminal domain SVI_RS08490 PF01557 Fumarylacetoacetate (FAA) hydrolase family SVI_RS08495 PF00196 Bacterial regulatory proteins, luxR family SVI_RS08495 PF00072 Response regulator receiver domain SVI_RS08500 PF03061 Thioesterase superfamily SVI_RS08505 PF00704 Glycosyl hydrolases family 18 SVI_RS08505 PF06483 Chitinase C SVI_RS08520 PF00793 DAHP synthetase I family SVI_RS08525 PF03618 Kinase/pyrophosphorylase SVI_RS08530 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SVI_RS08530 PF00391 PEP-utilising enzyme, mobile domain SVI_RS08530 PF02896 PEP-utilising enzyme, TIM barrel domain SVI_RS08535 PF02913 FAD linked oxidases, C-terminal domain SVI_RS08535 PF01565 FAD binding domain SVI_RS08535 PF13183 4Fe-4S dicluster domain SVI_RS08555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SVI_RS08555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SVI_RS08565 PF08007 Cupin superfamily protein SVI_RS08570 PF08328 Adenylosuccinate lyase C-terminal SVI_RS08570 PF00206 Lyase SVI_RS08575 PF04356 Protein of unknown function (DUF489) SVI_RS08585 PF00849 RNA pseudouridylate synthase SVI_RS08590 PF03971 Monomeric isocitrate dehydrogenase SVI_RS08595 PF00313 'Cold-shock' DNA-binding domain SVI_RS08600 PF02617 ATP-dependent Clp protease adaptor protein ClpS SVI_RS08605 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS08605 PF07724 AAA domain (Cdc48 subfamily) SVI_RS08605 PF17871 AAA lid domain SVI_RS08605 PF02861 Clp amino terminal domain, pathogenicity island component SVI_RS08605 PF10431 C-terminal, D2-small domain, of ClpB protein SVI_RS08610 PF01176 Translation initiation factor 1A / IF-1 SVI_RS08615 PF04377 Arginine-tRNA-protein transferase, C terminus SVI_RS08615 PF04376 Arginine-tRNA-protein transferase, N terminus SVI_RS08620 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SVI_RS08625 PF05433 Glycine zipper 2TM domain SVI_RS08635 PF01784 NIF3 (NGG1p interacting factor 3) SVI_RS08655 PF01053 Cys/Met metabolism PLP-dependent enzyme SVI_RS08660 PF00672 HAMP domain SVI_RS08660 PF13756 Stimulus-sensing domain SVI_RS08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS08660 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS08660 PF13755 Sensor N-terminal transmembrane domain SVI_RS08665 PF00072 Response regulator receiver domain SVI_RS08665 PF00486 Transcriptional regulatory protein, C terminal SVI_RS08685 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS08690 PF02470 MlaD protein SVI_RS08695 PF04403 Paraquat-inducible protein A SVI_RS08700 PF04403 Paraquat-inducible protein A SVI_RS08705 PF07130 YebG protein SVI_RS08710 PF13185 GAF domain SVI_RS08715 PF04352 ProQ/FINO family SVI_RS08715 PF17516 ProQ C-terminal domain SVI_RS08720 PF03572 Peptidase family S41 SVI_RS08720 PF17804 Tail specific protease N-terminal domain SVI_RS08720 PF00595 PDZ domain SVI_RS08720 PF11818 C-terminal domain of tail specific protease (DUF3340) SVI_RS08725 PF01433 Peptidase family M1 domain SVI_RS08725 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SVI_RS08725 PF11940 Domain of unknown function (DUF3458) Ig-like fold SVI_RS08740 PF07044 Protein of unknown function (DUF1329) SVI_RS08745 PF14870 Photosynthesis system II assembly factor YCF48 SVI_RS08755 PF05088 Bacterial NAD-glutamate dehydrogenase SVI_RS08760 PF01180 Dihydroorotate dehydrogenase SVI_RS08765 PF07126 Cell-division protein ZapC SVI_RS08770 PF10672 S-adenosylmethionine-dependent methyltransferase SVI_RS08770 PF02926 THUMP domain SVI_RS08770 PF01170 Putative RNA methylase family UPF0020 SVI_RS08780 PF12848 ABC transporter SVI_RS08780 PF00005 ABC transporter SVI_RS08780 PF16326 ABC transporter C-terminal domain SVI_RS08790 PF07977 FabA-like domain SVI_RS08795 PF13654 AAA domain SVI_RS08795 PF05362 Lon protease (S16) C-terminal proteolytic domain SVI_RS08805 PF00196 Bacterial regulatory proteins, luxR family SVI_RS08805 PF00072 Response regulator receiver domain SVI_RS08810 PF02151 UvrB/uvrC motif SVI_RS08810 PF01541 GIY-YIG catalytic domain SVI_RS08810 PF08459 UvrC Helix-hairpin-helix N-terminal SVI_RS08825 PF07690 Major Facilitator Superfamily SVI_RS08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS08840 PF03466 LysR substrate binding domain SVI_RS08845 PF01066 CDP-alcohol phosphatidyltransferase SVI_RS08865 PF07963 Prokaryotic N-terminal methylation motif SVI_RS08865 PF00114 Pilin (bacterial filament) SVI_RS08870 PF03734 L,D-transpeptidase catalytic domain SVI_RS08870 PF01471 Putative peptidoglycan binding domain SVI_RS08875 PF05951 Bacterial protein of unknown function (DUF882) SVI_RS08880 PF01386 Ribosomal L25p family SVI_RS08885 PF04293 SpoVR like protein SVI_RS08890 PF04285 Protein of unknown function (DUF444) SVI_RS08895 PF08298 PrkA AAA domain SVI_RS08895 PF06798 PrkA serine protein kinase C-terminal domain SVI_RS08900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SVI_RS08900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SVI_RS08905 PF00462 Glutaredoxin SVI_RS08910 PF00860 Permease family SVI_RS08920 PF00308 Bacterial dnaA protein SVI_RS08930 PF03960 ArsC family SVI_RS08935 PF01435 Peptidase family M48 SVI_RS08945 PF01594 AI-2E family transporter SVI_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS08950 PF03466 LysR substrate binding domain SVI_RS08955 PF01810 LysE type translocator SVI_RS08970 PF13006 Insertion element 4 transposase N-terminal SVI_RS08970 PF01609 Transposase DDE domain SVI_RS09010 PF00578 AhpC/TSA family SVI_RS09015 PF01842 ACT domain SVI_RS09020 PF00701 Dihydrodipicolinate synthetase family SVI_RS09025 PF06804 NlpB/DapX lipoprotein SVI_RS09030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS09035 PF00873 AcrB/AcrD/AcrF family SVI_RS09040 PF02868 Thermolysin metallopeptidase, alpha-helical domain SVI_RS09040 PF01447 Thermolysin metallopeptidase, catalytic domain SVI_RS09040 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS09040 PF07504 Fungalysin/Thermolysin Propeptide Motif SVI_RS09040 PF03413 Peptidase propeptide and YPEB domain SVI_RS09045 PF00899 ThiF family SVI_RS09045 PF00581 Rhodanese-like domain SVI_RS09055 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS09065 PF02348 Cytidylyltransferase SVI_RS09070 PF00465 Iron-containing alcohol dehydrogenase SVI_RS09075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SVI_RS09080 PF00484 Carbonic anhydrase SVI_RS09085 PF12697 Alpha/beta hydrolase family SVI_RS09090 PF02557 D-alanyl-D-alanine carboxypeptidase SVI_RS09095 PF01546 Peptidase family M20/M25/M40 SVI_RS09095 PF07687 Peptidase dimerisation domain SVI_RS09100 PF03960 ArsC family SVI_RS09115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SVI_RS09120 PF00391 PEP-utilising enzyme, mobile domain SVI_RS09120 PF05524 PEP-utilising enzyme, N-terminal SVI_RS09120 PF02896 PEP-utilising enzyme, TIM barrel domain SVI_RS09125 PF00381 PTS HPr component phosphorylation site SVI_RS09140 PF11490 DNA polymerase III polC-type N-terminus II SVI_RS09140 PF00929 Exonuclease SVI_RS09140 PF02811 PHP domain SVI_RS09140 PF14579 Helix-hairpin-helix motif SVI_RS09140 PF07733 Bacterial DNA polymerase III alpha NTPase domain SVI_RS09140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SVI_RS09145 PF00679 Elongation factor G C-terminus SVI_RS09145 PF00009 Elongation factor Tu GTP binding domain SVI_RS09145 PF03764 Elongation factor G, domain IV SVI_RS09145 PF14492 Elongation Factor G, domain II SVI_RS09145 PF03144 Elongation factor Tu domain 2 SVI_RS09150 PF08007 Cupin superfamily protein SVI_RS09200 PF18381 YcaO cyclodehydratase C-terminal domain SVI_RS09200 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SVI_RS09205 PF02311 AraC-like ligand binding domain SVI_RS09205 PF12833 Helix-turn-helix domain SVI_RS09210 PF07690 Major Facilitator Superfamily SVI_RS09215 PF00271 Helicase conserved C-terminal domain SVI_RS09215 PF00270 DEAD/DEAH box helicase SVI_RS09235 PF03895 YadA-like membrane anchor domain SVI_RS09245 PF07715 TonB-dependent Receptor Plug Domain SVI_RS09245 PF00593 TonB dependent receptor SVI_RS09320 PF07690 Major Facilitator Superfamily SVI_RS09325 PF01189 16S rRNA methyltransferase RsmB/F SVI_RS09325 PF01029 NusB family SVI_RS09335 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SVI_RS09335 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SVI_RS09340 PF00271 Helicase conserved C-terminal domain SVI_RS09340 PF12419 SNF2 Helicase protein SVI_RS09340 PF00176 SNF2 family N-terminal domain SVI_RS09345 PF07196 Flagellin hook IN motif SVI_RS09345 PF00669 Bacterial flagellin N-terminal helical region SVI_RS09345 PF00700 Bacterial flagellin C-terminal helical region SVI_RS09355 PF00578 AhpC/TSA family SVI_RS09370 PF02424 ApbE family SVI_RS09420 PF04972 BON domain SVI_RS09420 PF00263 Bacterial type II and III secretion system protein SVI_RS09420 PF13629 Pilus formation protein N terminal region SVI_RS09450 PF00437 Type II/IV secretion system protein SVI_RS09470 PF01336 OB-fold nucleic acid binding domain SVI_RS09470 PF00152 tRNA synthetases class II (D, K and N) SVI_RS09480 PF00293 NUDIX domain SVI_RS09485 PF04715 Anthranilate synthase component I, N terminal region SVI_RS09485 PF00425 chorismate binding enzyme SVI_RS09495 PF07676 WD40-like Beta Propeller Repeat SVI_RS09495 PF00326 Prolyl oligopeptidase family SVI_RS09495 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SVI_RS09510 PF00463 Isocitrate lyase family SVI_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS09515 PF03466 LysR substrate binding domain SVI_RS09520 PF01274 Malate synthase SVI_RS09525 PF00171 Aldehyde dehydrogenase family SVI_RS09525 PF00465 Iron-containing alcohol dehydrogenase SVI_RS09535 PF13286 Phosphohydrolase-associated domain SVI_RS09535 PF01966 HD domain SVI_RS09545 PF00155 Aminotransferase class I and II SVI_RS09550 PF01132 Elongation factor P (EF-P) OB domain SVI_RS09550 PF08207 Elongation factor P (EF-P) KOW-like domain SVI_RS09550 PF09285 Elongation factor P, C-terminal SVI_RS09560 PF00258 Flavodoxin SVI_RS09565 PF01402 Ribbon-helix-helix protein, copG family SVI_RS09575 PF12697 Alpha/beta hydrolase family SVI_RS09580 PF17206 SeqA protein N-terminal domain SVI_RS09580 PF03925 SeqA protein C-terminal domain SVI_RS09585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS09585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS09585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS09585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS09590 PF01625 Peptide methionine sulfoxide reductase SVI_RS09595 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SVI_RS09600 PF00676 Dehydrogenase E1 component SVI_RS09600 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal SVI_RS09605 PF02779 Transketolase, pyrimidine binding domain SVI_RS09605 PF02780 Transketolase, C-terminal domain SVI_RS09610 PF02817 e3 binding domain SVI_RS09610 PF00364 Biotin-requiring enzyme SVI_RS09610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SVI_RS09615 PF02445 Quinolinate synthetase A protein SVI_RS09620 PF12729 Four helix bundle sensory module for signal transduction SVI_RS09620 PF00672 HAMP domain SVI_RS09620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS09625 PF02631 RecX family SVI_RS09635 PF13396 Phospholipase_D-nuclease N-terminal SVI_RS09635 PF13091 PLD-like domain SVI_RS09640 PF03372 Endonuclease/Exonuclease/phosphatase family SVI_RS09650 PF09382 RQC domain SVI_RS09650 PF16124 RecQ zinc-binding SVI_RS09650 PF00570 HRDC domain SVI_RS09650 PF00271 Helicase conserved C-terminal domain SVI_RS09650 PF00270 DEAD/DEAH box helicase SVI_RS09665 PF00246 Zinc carboxypeptidase SVI_RS09665 PF18027 Cytosolic carboxypeptidase N-terminal domain SVI_RS09675 PF07023 Protein of unknown function (DUF1315) SVI_RS09680 PF17763 Glutaminase/Asparaginase C-terminal domain SVI_RS09680 PF00710 Asparaginase, N-terminal SVI_RS09685 PF01343 Peptidase family S49 SVI_RS09690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS09695 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS09700 PF00268 Ribonucleotide reductase, small chain SVI_RS09705 PF02867 Ribonucleotide reductase, barrel domain SVI_RS09705 PF03477 ATP cone domain SVI_RS09705 PF00317 Ribonucleotide reductase, all-alpha domain SVI_RS09710 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS09720 PF00521 DNA gyrase/topoisomerase IV, subunit A SVI_RS09720 PF03989 DNA gyrase C-terminal domain, beta-propeller SVI_RS09725 PF00266 Aminotransferase class-V SVI_RS09730 PF00155 Aminotransferase class I and II SVI_RS09735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SVI_RS09740 PF02224 Cytidylate kinase SVI_RS09745 PF00575 S1 RNA binding domain SVI_RS09750 PF00216 Bacterial DNA-binding protein SVI_RS09760 PF18073 Rubredoxin metal binding domain SVI_RS09765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SVI_RS09775 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SVI_RS09780 PF12806 Acetyl-CoA dehydrogenase C-terminal like SVI_RS09780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS09780 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS09780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS09785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SVI_RS09795 PF13091 PLD-like domain SVI_RS09800 PF07690 Major Facilitator Superfamily SVI_RS09805 PF03942 DTW domain SVI_RS09815 PF03466 LysR substrate binding domain SVI_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS09820 PF07690 Major Facilitator Superfamily SVI_RS09825 PF04209 homogentisate 1,2-dioxygenase SVI_RS09945 PF13361 UvrD-like helicase C-terminal domain SVI_RS09945 PF00580 UvrD/REP helicase N-terminal domain SVI_RS09945 PF12462 DNA helicase IV / RNA helicase N terminal SVI_RS09950 PF01447 Thermolysin metallopeptidase, catalytic domain SVI_RS09950 PF07504 Fungalysin/Thermolysin Propeptide Motif SVI_RS09950 PF02868 Thermolysin metallopeptidase, alpha-helical domain SVI_RS09965 PF00709 Adenylosuccinate synthetase SVI_RS09970 PF03466 LysR substrate binding domain SVI_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS09980 PF12848 ABC transporter SVI_RS09980 PF00005 ABC transporter SVI_RS09985 PF13193 AMP-binding enzyme C-terminal domain SVI_RS09985 PF00501 AMP-binding enzyme SVI_RS09990 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS09990 PF00072 Response regulator receiver domain SVI_RS09995 PF00082 Subtilase family SVI_RS09995 PF05922 Peptidase inhibitor I9 SVI_RS09995 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS10000 PF00849 RNA pseudouridylate synthase SVI_RS10005 PF11838 ERAP1-like C-terminal domain SVI_RS10005 PF01433 Peptidase family M1 domain SVI_RS10010 PF02899 Phage integrase, N-terminal SAM-like domain SVI_RS10010 PF00589 Phage integrase family SVI_RS10030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS10030 PF00672 HAMP domain SVI_RS10030 PF02743 Cache domain SVI_RS10040 PF00106 short chain dehydrogenase SVI_RS10075 PF00210 Ferritin-like domain SVI_RS10080 PF00210 Ferritin-like domain SVI_RS10085 PF00588 SpoU rRNA Methylase family SVI_RS10100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SVI_RS10100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SVI_RS10115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SVI_RS10115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SVI_RS10135 PF00155 Aminotransferase class I and II SVI_RS10140 PF01933 Uncharacterised protein family UPF0052 SVI_RS10145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SVI_RS10155 PF01171 PP-loop family SVI_RS10160 PF00582 Universal stress protein family SVI_RS10165 PF00027 Cyclic nucleotide-binding domain SVI_RS10165 PF13545 Crp-like helix-turn-helix domain SVI_RS10180 PF00403 Heavy-metal-associated domain SVI_RS10190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SVI_RS10190 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SVI_RS10205 PF00115 Cytochrome C and Quinol oxidase polypeptide I SVI_RS10215 PF11849 Domain of unknown function (DUF3369) SVI_RS10320 PF01494 FAD binding domain SVI_RS10330 PF01590 GAF domain SVI_RS10330 PF00158 Sigma-54 interaction domain SVI_RS10335 PF00753 Metallo-beta-lactamase superfamily SVI_RS10335 PF00258 Flavodoxin SVI_RS10335 PF00301 Rubredoxin SVI_RS10340 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS10340 PF18113 Rubredoxin binding C-terminal domain SVI_RS10355 PF00854 POT family SVI_RS10365 PF00593 TonB dependent receptor SVI_RS10365 PF07715 TonB-dependent Receptor Plug Domain SVI_RS10375 PF09722 Protein of unknown function (DUF2384) SVI_RS10380 PF08808 RES domain SVI_RS10385 PF10415 Fumarase C C-terminus SVI_RS10385 PF00206 Lyase SVI_RS10395 PF00701 Dihydrodipicolinate synthetase family SVI_RS10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS10405 PF03466 LysR substrate binding domain SVI_RS10410 PF07694 5TMR of 5TMR-LYT SVI_RS10410 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS10430 PF00873 AcrB/AcrD/AcrF family SVI_RS10435 PF05362 Lon protease (S16) C-terminal proteolytic domain SVI_RS10435 PF13654 AAA domain SVI_RS10450 PF01312 FlhB HrpN YscU SpaS Family SVI_RS10455 PF01311 Bacterial export proteins, family 1 SVI_RS10460 PF01313 Bacterial export proteins, family 3 SVI_RS10465 PF00813 FliP family SVI_RS10485 PF18269 T3SS EscN ATPase C-terminal domain SVI_RS10485 PF02874 ATP synthase alpha/beta family, beta-barrel domain SVI_RS10485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SVI_RS10490 PF00771 FHIPEP family SVI_RS10520 PF01514 Secretory protein of YscJ/FliF family SVI_RS10540 PF12833 Helix-turn-helix domain SVI_RS10575 PF04888 Secretion system effector C (SseC) like family SVI_RS10585 PF03433 EspA-like secreted protein SVI_RS10610 PF00263 Bacterial type II and III secretion system protein SVI_RS10610 PF03958 Bacterial type II/III secretion system short domain SVI_RS10620 PF00672 HAMP domain SVI_RS10620 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS10620 PF01627 Hpt domain SVI_RS10620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SVI_RS10620 PF00072 Response regulator receiver domain SVI_RS10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS10625 PF00196 Bacterial regulatory proteins, luxR family SVI_RS10625 PF00072 Response regulator receiver domain SVI_RS10630 PF00717 Peptidase S24-like SVI_RS10635 PF13438 Domain of unknown function (DUF4113) SVI_RS10635 PF00817 impB/mucB/samB family SVI_RS10635 PF11799 impB/mucB/samB family C-terminal domain SVI_RS10655 PF13533 Biotin-lipoyl like SVI_RS10660 PF00873 AcrB/AcrD/AcrF family SVI_RS10675 PF03781 Sulfatase-modifying factor enzyme 1 SVI_RS10680 PF07676 WD40-like Beta Propeller Repeat SVI_RS10680 PF04052 TolB amino-terminal domain SVI_RS10685 PF07715 TonB-dependent Receptor Plug Domain SVI_RS10685 PF00593 TonB dependent receptor SVI_RS10690 PF00672 HAMP domain SVI_RS10690 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS10695 PF00158 Sigma-54 interaction domain SVI_RS10695 PF02954 Bacterial regulatory protein, Fis family SVI_RS10695 PF00072 Response regulator receiver domain SVI_RS10700 PF12704 MacB-like periplasmic core domain SVI_RS10700 PF02687 FtsX-like permease family SVI_RS10700 PF00005 ABC transporter SVI_RS10705 PF00005 ABC transporter SVI_RS10705 PF12704 MacB-like periplasmic core domain SVI_RS10705 PF02687 FtsX-like permease family SVI_RS10720 PF07690 Major Facilitator Superfamily SVI_RS10725 PF03466 LysR substrate binding domain SVI_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS10730 PF01027 Inhibitor of apoptosis-promoting Bax1 SVI_RS10735 PF02635 DsrE/DsrF-like family SVI_RS10740 PF02635 DsrE/DsrF-like family SVI_RS10750 PF04358 DsrC like protein SVI_RS10760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SVI_RS10760 PF02403 Seryl-tRNA synthetase N-terminal domain SVI_RS10765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SVI_RS10770 PF16193 AAA C-terminal domain SVI_RS10770 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS10770 PF12002 MgsA AAA+ ATPase C terminal SVI_RS10775 PF03548 Outer membrane lipoprotein carrier protein LolA SVI_RS10780 PF09397 Ftsk gamma domain SVI_RS10780 PF01580 FtsK/SpoIIIE family SVI_RS10780 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SVI_RS10780 PF17854 FtsK alpha domain SVI_RS10785 PF01037 Lrp/AsnC ligand binding domain SVI_RS10790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SVI_RS10790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SVI_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS10800 PF00453 Ribosomal protein L20 SVI_RS10805 PF01632 Ribosomal protein L35 SVI_RS10810 PF00707 Translation initiation factor IF-3, C-terminal domain SVI_RS10810 PF05198 Translation initiation factor IF-3, N-terminal domain SVI_RS10815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SVI_RS10815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SVI_RS10815 PF03129 Anticodon binding domain SVI_RS10815 PF02824 TGS domain SVI_RS10835 PF00677 Lumazine binding domain SVI_RS10840 PF01554 MatE SVI_RS10905 PF13607 Succinyl-CoA ligase like flavodoxin domain SVI_RS10905 PF13380 CoA binding domain SVI_RS10905 PF00583 Acetyltransferase (GNAT) family SVI_RS10910 PF00072 Response regulator receiver domain SVI_RS10910 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS10915 PF00884 Sulfatase SVI_RS10915 PF08019 Phosphoethanolamine transferase EptA/EptB SVI_RS10930 PF01081 KDPG and KHG aldolase SVI_RS10935 PF00920 Dehydratase family SVI_RS10940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SVI_RS10945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SVI_RS10945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SVI_RS10950 PF01418 Helix-turn-helix domain, rpiR family SVI_RS10950 PF01380 SIS domain SVI_RS10955 PF02887 Pyruvate kinase, alpha/beta domain SVI_RS10955 PF00224 Pyruvate kinase, barrel domain SVI_RS10960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS10960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS10960 PF09317 Domain of unknown function (DUF1974) SVI_RS10965 PF00440 Bacterial regulatory proteins, tetR family SVI_RS10980 PF02810 SEC-C motif SVI_RS10985 PF00563 EAL domain SVI_RS10985 PF03707 Bacterial signalling protein N terminal repeat SVI_RS10985 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS11035 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS11040 PF04055 Radical SAM superfamily SVI_RS11045 PF06508 Queuosine biosynthesis protein QueC SVI_RS11055 PF00271 Helicase conserved C-terminal domain SVI_RS11055 PF04851 Type III restriction enzyme, res subunit SVI_RS11055 PF02151 UvrB/uvrC motif SVI_RS11055 PF12344 Ultra-violet resistance protein B SVI_RS11055 PF17757 UvrB interaction domain SVI_RS11100 PF02508 Rnf-Nqr subunit, membrane protein SVI_RS11105 PF04060 Putative Fe-S cluster SVI_RS11110 PF13375 RnfC Barrel sandwich hybrid domain SVI_RS11110 PF13237 4Fe-4S dicluster domain SVI_RS11110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SVI_RS11110 PF10531 SLBB domain SVI_RS11115 PF03116 NQR2, RnfD, RnfE family SVI_RS11120 PF04205 FMN-binding domain SVI_RS11125 PF02508 Rnf-Nqr subunit, membrane protein SVI_RS11130 PF10576 Iron-sulfur binding domain of endonuclease III SVI_RS11130 PF00730 HhH-GPD superfamily base excision DNA repair protein SVI_RS11130 PF00633 Helix-hairpin-helix motif SVI_RS11135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS11140 PF00593 TonB dependent receptor SVI_RS11140 PF07715 TonB-dependent Receptor Plug Domain SVI_RS11170 PF05496 Holliday junction DNA helicase RuvB P-loop domain SVI_RS11170 PF17864 RuvB AAA lid domain SVI_RS11170 PF05491 RuvB C-terminal winged helix domain SVI_RS11175 PF01330 RuvA N terminal domain SVI_RS11175 PF07499 RuvA, C-terminal domain SVI_RS11180 PF02075 Crossover junction endodeoxyribonuclease RuvC SVI_RS11185 PF01709 Transcriptional regulator SVI_RS11190 PF01336 OB-fold nucleic acid binding domain SVI_RS11190 PF00152 tRNA synthetases class II (D, K and N) SVI_RS11190 PF02938 GAD domain SVI_RS11195 PF03707 Bacterial signalling protein N terminal repeat SVI_RS11195 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS11195 PF00563 EAL domain SVI_RS11200 PF13649 Methyltransferase domain SVI_RS11205 PF08003 Protein of unknown function (DUF1698) SVI_RS11210 PF18030 RimK PreATP-grasp domain SVI_RS11210 PF08443 RimK-like ATP-grasp domain SVI_RS11250 PF04055 Radical SAM superfamily SVI_RS11250 PF06968 Biotin and Thiamin Synthesis associated domain SVI_RS11255 PF05690 Thiazole biosynthesis protein ThiG SVI_RS11265 PF00899 ThiF family SVI_RS11270 PF02581 Thiamine monophosphate synthase SVI_RS11275 PF13667 ThiC-associated domain SVI_RS11275 PF01964 Radical SAM ThiC family SVI_RS11285 PF03006 Haemolysin-III related SVI_RS11300 PF01327 Polypeptide deformylase SVI_RS11305 PF07690 Major Facilitator Superfamily SVI_RS11320 PF13230 Glutamine amidotransferases class-II SVI_RS11325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS11325 PF09317 Domain of unknown function (DUF1974) SVI_RS11325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS11330 PF00999 Sodium/hydrogen exchanger family SVI_RS11330 PF02080 TrkA-C domain SVI_RS11330 PF03471 Transporter associated domain SVI_RS11350 PF00929 Exonuclease SVI_RS11355 PF00075 RNase H SVI_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS11360 PF03466 LysR substrate binding domain SVI_RS11365 PF08241 Methyltransferase domain SVI_RS11370 PF00753 Metallo-beta-lactamase superfamily SVI_RS11370 PF16123 Hydroxyacylglutathione hydrolase C-terminus SVI_RS11375 PF01476 LysM domain SVI_RS11375 PF01464 Transglycosylase SLT domain SVI_RS11395 PF00672 HAMP domain SVI_RS11395 PF17200 Single Cache domain 2 SVI_RS11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS11400 PF01794 Ferric reductase like transmembrane component SVI_RS11405 PF00174 Oxidoreductase molybdopterin binding domain SVI_RS11410 PF02646 RmuC family SVI_RS11415 PF01464 Transglycosylase SLT domain SVI_RS11415 PF14718 Soluble lytic murein transglycosylase L domain SVI_RS11425 PF07726 ATPase family associated with various cellular activities (AAA) SVI_RS11425 PF17863 AAA lid domain SVI_RS11435 PF11992 Domain of unknown function (DUF3488) SVI_RS11435 PF13559 Domain of unknown function (DUF4129) SVI_RS11435 PF01841 Transglutaminase-like superfamily SVI_RS11440 PF17946 RecC C-terminal domain SVI_RS11445 PF12705 PD-(D/E)XK nuclease superfamily SVI_RS11445 PF00580 UvrD/REP helicase N-terminal domain SVI_RS11445 PF13361 UvrD-like helicase C-terminal domain SVI_RS11450 PF13538 UvrD-like helicase C-terminal domain SVI_RS11485 PF01820 D-ala D-ala ligase N-terminus SVI_RS11485 PF07478 D-ala D-ala ligase C-terminus SVI_RS11500 PF03466 LysR substrate binding domain SVI_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS11505 PF03264 NapC/NirT cytochrome c family, N-terminal region SVI_RS11510 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SVI_RS11515 PF01568 Molydopterin dinucleotide binding domain SVI_RS11515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SVI_RS11515 PF00384 Molybdopterin oxidoreductase SVI_RS11530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SVI_RS11530 PF11898 Domain of unknown function (DUF3418) SVI_RS11530 PF00270 DEAD/DEAH box helicase SVI_RS11530 PF00271 Helicase conserved C-terminal domain SVI_RS11530 PF04408 Helicase associated domain (HA2) SVI_RS11555 PF06445 GyrI-like small molecule binding domain SVI_RS11610 PF01734 Patatin-like phospholipase SVI_RS11615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS11635 PF00171 Aldehyde dehydrogenase family SVI_RS11640 PF00440 Bacterial regulatory proteins, tetR family SVI_RS11640 PF17932 Tetracyclin repressor-like, C-terminal domain SVI_RS11650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS11660 PF00313 'Cold-shock' DNA-binding domain SVI_RS11670 PF01810 LysE type translocator SVI_RS11675 PF03466 LysR substrate binding domain SVI_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS11680 PF01112 Asparaginase SVI_RS11685 PF01103 Surface antigen SVI_RS11685 PF17243 POTRA domain TamA domain 1 SVI_RS11690 PF04357 TamB, inner membrane protein subunit of TAM complex SVI_RS11695 PF00392 Bacterial regulatory proteins, gntR family SVI_RS11695 PF07840 FadR C-terminal domain SVI_RS11700 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SVI_RS11705 PF02600 Disulfide bond formation protein DsbB SVI_RS11710 PF03692 Putative zinc- or iron-chelating domain SVI_RS11720 PF05166 YcgL domain SVI_RS11725 PF03775 Septum formation inhibitor MinC, C-terminal domain SVI_RS11725 PF05209 Septum formation inhibitor MinC, N-terminal domain SVI_RS11730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SVI_RS11735 PF03776 Septum formation topological specificity factor MinE SVI_RS11740 PF00570 HRDC domain SVI_RS11740 PF01612 3'-5' exonuclease SVI_RS11745 PF13193 AMP-binding enzyme C-terminal domain SVI_RS11745 PF00501 AMP-binding enzyme SVI_RS11750 PF12697 Alpha/beta hydrolase family SVI_RS11770 PF00814 Glycoprotease family SVI_RS11775 PF00958 GMP synthase C terminal domain SVI_RS11775 PF00117 Glutamine amidotransferase class-I SVI_RS11780 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS11785 PF13307 Helicase C-terminal domain SVI_RS11785 PF04851 Type III restriction enzyme, res subunit SVI_RS11790 PF11871 Domain of unknown function (DUF3391) SVI_RS11790 PF01966 HD domain SVI_RS11795 PF13309 HTH domain SVI_RS11795 PF08348 YheO-like PAS domain SVI_RS11800 PF03313 Serine dehydratase alpha chain SVI_RS11805 PF01042 Endoribonuclease L-PSP SVI_RS11820 PF08029 HisG, C-terminal domain SVI_RS11820 PF01634 ATP phosphoribosyltransferase SVI_RS11825 PF00815 Histidinol dehydrogenase SVI_RS11830 PF00155 Aminotransferase class I and II SVI_RS11835 PF00475 Imidazoleglycerol-phosphate dehydratase SVI_RS11835 PF08645 Polynucleotide kinase 3 phosphatase SVI_RS11840 PF00117 Glutamine amidotransferase class-I SVI_RS11845 PF00977 Histidine biosynthesis protein SVI_RS11850 PF00977 Histidine biosynthesis protein SVI_RS11855 PF01502 Phosphoribosyl-AMP cyclohydrolase SVI_RS11855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SVI_RS11865 PF01259 SAICAR synthetase SVI_RS11880 PF00589 Phage integrase family SVI_RS11880 PF13495 Phage integrase, N-terminal SAM-like domain SVI_RS11895 PF07715 TonB-dependent Receptor Plug Domain SVI_RS11915 PF13302 Acetyltransferase (GNAT) domain SVI_RS11920 PF03279 Bacterial lipid A biosynthesis acyltransferase SVI_RS11925 PF00216 Bacterial DNA-binding protein SVI_RS11930 PF01588 Putative tRNA binding domain SVI_RS11930 PF03147 Ferredoxin-fold anticodon binding domain SVI_RS11930 PF03483 B3/4 domain SVI_RS11930 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SVI_RS11930 PF03484 tRNA synthetase B5 domain SVI_RS11935 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SVI_RS11935 PF01409 tRNA synthetases class II core domain (F) SVI_RS11965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SVI_RS11965 PF01243 Pyridoxamine 5'-phosphate oxidase SVI_RS11970 PF00491 Arginase family SVI_RS11980 PF17944 Arginine decarboxylase C-terminal helical extension SVI_RS11980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SVI_RS11980 PF17810 Arginine decarboxylase helical bundle domain SVI_RS11990 PF04337 Protein of unknown function, DUF480 SVI_RS12000 PF00005 ABC transporter SVI_RS12005 PF00313 'Cold-shock' DNA-binding domain SVI_RS12010 PF13847 Methyltransferase domain SVI_RS12030 PF08411 Exonuclease C-terminal SVI_RS12030 PF00929 Exonuclease SVI_RS12035 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SVI_RS12035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SVI_RS12040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SVI_RS12040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SVI_RS12050 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS12050 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS12055 PF00550 Phosphopantetheine attachment site SVI_RS12065 PF00698 Acyl transferase domain SVI_RS12070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SVI_RS12070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SVI_RS12075 PF02504 Fatty acid synthesis protein SVI_RS12080 PF01783 Ribosomal L32p protein family SVI_RS12085 PF02620 Large ribosomal RNA subunit accumulation protein YceD SVI_RS12090 PF02545 Maf-like protein SVI_RS12100 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS12105 PF01479 S4 domain SVI_RS12105 PF00849 RNA pseudouridylate synthase SVI_RS12110 PF00575 S1 RNA binding domain SVI_RS12110 PF12111 Polyribonucleotide phosphorylase C terminal SVI_RS12110 PF10150 Ribonuclease E/G family SVI_RS12115 PF00916 Sulfate permease family SVI_RS12115 PF01740 STAS domain SVI_RS12120 PF01625 Peptide methionine sulfoxide reductase SVI_RS12130 PF01926 50S ribosome-binding GTPase SVI_RS12135 PF01451 Low molecular weight phosphotyrosine protein phosphatase SVI_RS12145 PF14743 DNA ligase OB-like domain SVI_RS12145 PF01068 ATP dependent DNA ligase domain SVI_RS12150 PF01219 Prokaryotic diacylglycerol kinase SVI_RS12165 PF07670 Nucleoside recognition SVI_RS12170 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SVI_RS12170 PF01189 16S rRNA methyltransferase RsmB/F SVI_RS12170 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SVI_RS12175 PF01026 TatD related DNase SVI_RS12185 PF09115 DNA polymerase III, delta subunit, C terminal SVI_RS12190 PF02223 Thymidylate kinase SVI_RS12195 PF02618 YceG-like family SVI_RS12200 PF01063 Amino-transferase class IV SVI_RS12205 PF00485 Phosphoribulokinase / Uridine kinase family SVI_RS12215 PF01588 Putative tRNA binding domain SVI_RS12215 PF09334 tRNA synthetases class I (M) SVI_RS12220 PF00581 Rhodanese-like domain SVI_RS12235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SVI_RS12235 PF03129 Anticodon binding domain SVI_RS12235 PF04073 Aminoacyl-tRNA editing domain SVI_RS12240 PF01957 NfeD-like C-terminal, partner-binding SVI_RS12240 PF01972 Serine dehydrogenase proteinase SVI_RS12245 PF16200 C-terminal region of band_7 SVI_RS12245 PF01145 SPFH domain / Band 7 family SVI_RS12250 PF17773 UPF0176 acylphosphatase like domain SVI_RS12250 PF00581 Rhodanese-like domain SVI_RS12260 PF00583 Acetyltransferase (GNAT) family SVI_RS12265 PF04228 Putative neutral zinc metallopeptidase SVI_RS12270 PF07690 Major Facilitator Superfamily SVI_RS12275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SVI_RS12275 PF00205 Thiamine pyrophosphate enzyme, central domain SVI_RS12275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SVI_RS12280 PF10369 Small subunit of acetolactate synthase SVI_RS12285 PF00011 Hsp20/alpha crystallin family SVI_RS12290 PF02872 5'-nucleotidase, C-terminal domain SVI_RS12290 PF00149 Calcineurin-like phosphoesterase SVI_RS12295 PF00149 Calcineurin-like phosphoesterase SVI_RS12295 PF02872 5'-nucleotidase, C-terminal domain SVI_RS12300 PF02230 Phospholipase/Carboxylesterase SVI_RS12305 PF13409 Glutathione S-transferase, N-terminal domain SVI_RS12315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS12320 PF13406 Transglycosylase SLT domain SVI_RS12335 PF01584 CheW-like domain SVI_RS12335 PF00072 Response regulator receiver domain SVI_RS12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS12370 PF03466 LysR substrate binding domain SVI_RS12375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SVI_RS12380 PF01810 LysE type translocator SVI_RS12400 PF01432 Peptidase family M3 SVI_RS12405 PF02872 5'-nucleotidase, C-terminal domain SVI_RS12405 PF00149 Calcineurin-like phosphoesterase SVI_RS12420 PF02567 Phenazine biosynthesis-like protein SVI_RS12440 PF03466 LysR substrate binding domain SVI_RS12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS12445 PF03992 Antibiotic biosynthesis monooxygenase SVI_RS12460 PF00326 Prolyl oligopeptidase family SVI_RS12465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SVI_RS12465 PF12833 Helix-turn-helix domain SVI_RS12470 PF01161 Phosphatidylethanolamine-binding protein SVI_RS12480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS12480 PF12806 Acetyl-CoA dehydrogenase C-terminal like SVI_RS12480 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS12480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS12485 PF01263 Aldose 1-epimerase SVI_RS12495 PF13617 YnbE-like lipoprotein SVI_RS12505 PF08453 Peptidase family M9 N-terminal SVI_RS12505 PF01752 Collagenase SVI_RS12510 PF03605 Anaerobic c4-dicarboxylate membrane transporter SVI_RS12550 PF13495 Phage integrase, N-terminal SAM-like domain SVI_RS12550 PF00589 Phage integrase family SVI_RS12565 PF01177 Asp/Glu/Hydantoin racemase SVI_RS12595 PF04886 PT repeat SVI_RS12595 PF00593 TonB dependent receptor SVI_RS12595 PF07715 TonB-dependent Receptor Plug Domain SVI_RS12610 PF11965 Domain of unknown function (DUF3479) SVI_RS12610 PF02514 CobN/Magnesium Chelatase SVI_RS12620 PF12704 MacB-like periplasmic core domain SVI_RS12620 PF00005 ABC transporter SVI_RS12620 PF02687 FtsX-like permease family SVI_RS12640 PF02687 FtsX-like permease family SVI_RS12640 PF00005 ABC transporter SVI_RS12640 PF12704 MacB-like periplasmic core domain SVI_RS12675 PF00881 Nitroreductase family SVI_RS12690 PF04973 Nicotinamide mononucleotide transporter SVI_RS12700 PF00593 TonB dependent receptor SVI_RS12700 PF07715 TonB-dependent Receptor Plug Domain SVI_RS12720 PF01230 HIT domain SVI_RS12725 PF03783 Curli production assembly/transport component CsgG SVI_RS12740 PF00196 Bacterial regulatory proteins, luxR family SVI_RS12760 PF03793 PASTA domain SVI_RS12760 PF00069 Protein kinase domain SVI_RS12765 PF07690 Major Facilitator Superfamily SVI_RS12770 PF13806 Rieske-like [2Fe-2S] domain SVI_RS12775 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS12775 PF13806 Rieske-like [2Fe-2S] domain SVI_RS12775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SVI_RS12775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SVI_RS12775 PF04324 BFD-like [2Fe-2S] binding domain SVI_RS12775 PF18267 Rubredoxin NAD+ reductase C-terminal domain SVI_RS12790 PF10414 Sirohaem synthase dimerisation region SVI_RS12790 PF14824 Sirohaem biosynthesis protein central SVI_RS12790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SVI_RS12795 PF01435 Peptidase family M48 SVI_RS12800 PF03401 Tripartite tricarboxylate transporter family receptor SVI_RS12810 PF08241 Methyltransferase domain SVI_RS12820 PF04055 Radical SAM superfamily SVI_RS12820 PF06968 Biotin and Thiamin Synthesis associated domain SVI_RS12825 PF00202 Aminotransferase class-III SVI_RS12825 PF06968 Biotin and Thiamin Synthesis associated domain SVI_RS12825 PF04055 Radical SAM superfamily SVI_RS12835 PF09163 Formate dehydrogenase N, transmembrane SVI_RS12835 PF12800 4Fe-4S binding domain SVI_RS12835 PF13247 4Fe-4S dicluster domain SVI_RS12840 PF01568 Molydopterin dinucleotide binding domain SVI_RS12840 PF00384 Molybdopterin oxidoreductase SVI_RS12840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SVI_RS12845 PF03974 Ecotin SVI_RS12865 PF09055 Nickel-containing superoxide dismutase SVI_RS12890 PF02146 Sir2 family SVI_RS12895 PF01475 Ferric uptake regulator family SVI_RS12905 PF01645 Conserved region in glutamate synthase SVI_RS12915 PF02629 CoA binding domain SVI_RS12915 PF00549 CoA-ligase SVI_RS12920 PF00549 CoA-ligase SVI_RS12920 PF08442 ATP-grasp domain SVI_RS12925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SVI_RS12925 PF00364 Biotin-requiring enzyme SVI_RS12925 PF02817 e3 binding domain SVI_RS12930 PF02779 Transketolase, pyrimidine binding domain SVI_RS12930 PF00676 Dehydrogenase E1 component SVI_RS12930 PF16870 2-oxoglutarate dehydrogenase C-terminal SVI_RS12930 PF16078 2-oxoglutarate dehydrogenase N-terminus SVI_RS12935 PF13085 2Fe-2S iron-sulfur cluster binding domain SVI_RS12940 PF02910 Fumarate reductase flavoprotein C-term SVI_RS12940 PF00890 FAD binding domain SVI_RS12945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SVI_RS12950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SVI_RS12955 PF00285 Citrate synthase, C-terminal domain SVI_RS12960 PF00285 Citrate synthase, C-terminal domain SVI_RS12970 PF13673 Acetyltransferase (GNAT) domain SVI_RS12980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS12985 PF00873 AcrB/AcrD/AcrF family SVI_RS12990 PF00873 AcrB/AcrD/AcrF family SVI_RS13000 PF03966 Trm112p-like protein SVI_RS13005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SVI_RS13010 PF00664 ABC transporter transmembrane region SVI_RS13010 PF00005 ABC transporter SVI_RS13015 PF00753 Metallo-beta-lactamase superfamily SVI_RS13015 PF13567 Domain of unknown function (DUF4131) SVI_RS13015 PF03772 Competence protein SVI_RS13030 PF00005 ABC transporter SVI_RS13035 PF02687 FtsX-like permease family SVI_RS13035 PF12704 MacB-like periplasmic core domain SVI_RS13045 PF02559 CarD-like/TRCF domain SVI_RS13045 PF17757 UvrB interaction domain SVI_RS13045 PF03461 TRCF domain SVI_RS13045 PF00271 Helicase conserved C-terminal domain SVI_RS13045 PF00270 DEAD/DEAH box helicase SVI_RS13055 PF00708 Acylphosphatase SVI_RS13060 PF05728 Uncharacterised protein family (UPF0227) SVI_RS13065 PF00933 Glycosyl hydrolase family 3 N terminal domain SVI_RS13070 PF03315 Serine dehydratase beta chain SVI_RS13070 PF03313 Serine dehydratase alpha chain SVI_RS13075 PF03466 LysR substrate binding domain SVI_RS13075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS13085 PF01131 DNA topoisomerase SVI_RS13085 PF08272 Topoisomerase I zinc-ribbon-like SVI_RS13085 PF01751 Toprim domain SVI_RS13085 PF01396 Topoisomerase DNA binding C4 zinc finger SVI_RS13090 PF04996 Succinylarginine dihydrolase SVI_RS13100 PF00375 Sodium:dicarboxylate symporter family SVI_RS13105 PF00294 pfkB family carbohydrate kinase SVI_RS13110 PF00762 Ferrochelatase SVI_RS13115 PF05191 Adenylate kinase, active site lid SVI_RS13120 PF00085 Thioredoxin SVI_RS13125 PF00183 Hsp90 protein SVI_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS13130 PF02132 RecR protein SVI_RS13130 PF13662 Toprim domain SVI_RS13135 PF02575 YbaB/EbfC DNA-binding family SVI_RS13140 PF12169 DNA polymerase III subunits gamma and tau domain III SVI_RS13140 PF12170 DNA polymerase III tau subunit V interacting with alpha SVI_RS13140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SVI_RS13145 PF00156 Phosphoribosyl transferase domain SVI_RS13150 PF04304 Protein of unknown function (DUF454) SVI_RS13160 PF05114 Protein of unknown function (DUF692) SVI_RS13170 PF01207 Dihydrouridine synthase (Dus) SVI_RS13180 PF08496 Peptidase family S49 N-terminal SVI_RS13180 PF01343 Peptidase family S49 SVI_RS13185 PF12262 Bacterial virulence factor lipase N-terminal SVI_RS13190 PF00106 short chain dehydrogenase SVI_RS13200 PF00849 RNA pseudouridylate synthase SVI_RS13200 PF01479 S4 domain SVI_RS13205 PF04079 Segregation and condensation complex subunit ScpB SVI_RS13210 PF02616 Segregation and condensation protein ScpA SVI_RS13215 PF01300 Telomere recombination SVI_RS13220 PF02811 PHP domain SVI_RS13230 PF00425 chorismate binding enzyme SVI_RS13230 PF04715 Anthranilate synthase component I, N terminal region SVI_RS13235 PF00117 Glutamine amidotransferase class-I SVI_RS13240 PF02885 Glycosyl transferase family, helical bundle domain SVI_RS13240 PF00591 Glycosyl transferase family, a/b domain SVI_RS13245 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SVI_RS13245 PF00218 Indole-3-glycerol phosphate synthase SVI_RS13250 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS13255 PF00290 Tryptophan synthase alpha chain SVI_RS13260 PF00326 Prolyl oligopeptidase family SVI_RS13260 PF07676 WD40-like Beta Propeller Repeat SVI_RS13275 PF04279 Intracellular septation protein A SVI_RS13280 PF03795 YCII-related domain SVI_RS13285 PF03372 Endonuclease/Exonuclease/phosphatase family SVI_RS13290 PF07715 TonB-dependent Receptor Plug Domain SVI_RS13290 PF00593 TonB dependent receptor SVI_RS13300 PF13193 AMP-binding enzyme C-terminal domain SVI_RS13300 PF00501 AMP-binding enzyme SVI_RS13305 PF12833 Helix-turn-helix domain SVI_RS13305 PF01965 DJ-1/PfpI family SVI_RS13310 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS13310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS13315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS13315 PF00672 HAMP domain SVI_RS13325 PF05199 GMC oxidoreductase SVI_RS13325 PF00732 GMC oxidoreductase SVI_RS13330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SVI_RS13335 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS13335 PF01799 [2Fe-2S] binding domain SVI_RS13340 PF12804 MobA-like NTP transferase domain SVI_RS13350 PF00753 Metallo-beta-lactamase superfamily SVI_RS13355 PF00561 alpha/beta hydrolase fold SVI_RS13445 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS13445 PF00563 EAL domain SVI_RS13445 PF00360 Phytochrome region SVI_RS13445 PF01590 GAF domain SVI_RS13475 PF02600 Disulfide bond formation protein DsbB SVI_RS13480 PF01758 Sodium Bile acid symporter family SVI_RS13485 PF13533 Biotin-lipoyl like SVI_RS13520 PF01131 DNA topoisomerase SVI_RS13520 PF01751 Toprim domain SVI_RS13535 PF00156 Phosphoribosyl transferase domain SVI_RS13540 PF02674 Colicin V production protein SVI_RS13545 PF05036 Sporulation related domain SVI_RS13550 PF08245 Mur ligase middle domain SVI_RS13550 PF02875 Mur ligase family, glutamate ligase domain SVI_RS13555 PF01416 tRNA pseudouridine synthase SVI_RS13565 PF01118 Semialdehyde dehydrogenase, NAD binding domain SVI_RS13565 PF02774 Semialdehyde dehydrogenase, dimerisation domain SVI_RS13570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SVI_RS13570 PF11890 Domain of unknown function (DUF3410) SVI_RS13570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SVI_RS13580 PF02567 Phenazine biosynthesis-like protein SVI_RS13595 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS13595 PF00563 EAL domain SVI_RS13595 PF03707 Bacterial signalling protein N terminal repeat SVI_RS13610 PF12392 Collagenase SVI_RS13610 PF01136 Peptidase family U32 SVI_RS13615 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS13615 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS13620 PF01266 FAD dependent oxidoreductase SVI_RS13640 PF12832 MFS_1 like family SVI_RS13650 PF05175 Methyltransferase small domain SVI_RS13655 PF01713 Smr domain SVI_RS13660 PF00300 Histidine phosphatase superfamily (branch 1) SVI_RS13665 PF00675 Insulinase (Peptidase family M16) SVI_RS13665 PF05193 Peptidase M16 inactive domain SVI_RS13665 PF16187 Middle or third domain of peptidase_M16 SVI_RS13670 PF00563 EAL domain SVI_RS13670 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS13670 PF03707 Bacterial signalling protein N terminal repeat SVI_RS13685 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS13685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SVI_RS13685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SVI_RS13690 PF02803 Thiolase, C-terminal domain SVI_RS13690 PF00108 Thiolase, N-terminal domain SVI_RS13695 PF17863 AAA lid domain SVI_RS13695 PF07726 ATPase family associated with various cellular activities (AAA) SVI_RS13700 PF01882 Protein of unknown function DUF58 SVI_RS13715 PF13519 von Willebrand factor type A domain SVI_RS13725 PF08281 Sigma-70, region 4 SVI_RS13725 PF04542 Sigma-70 region 2 SVI_RS13740 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SVI_RS13750 PF17773 UPF0176 acylphosphatase like domain SVI_RS13750 PF12368 Rhodanase C-terminal SVI_RS13750 PF00581 Rhodanese-like domain SVI_RS13755 PF05922 Peptidase inhibitor I9 SVI_RS13755 PF00082 Subtilase family SVI_RS13760 PF09905 DNA-binding protein VF530 SVI_RS13765 PF01274 Malate synthase SVI_RS13775 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS13775 PF08659 KR domain SVI_RS13775 PF00107 Zinc-binding dehydrogenase SVI_RS13775 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS13775 PF00550 Phosphopantetheine attachment site SVI_RS13775 PF00698 Acyl transferase domain SVI_RS13775 PF14765 Polyketide synthase dehydratase SVI_RS13775 PF16197 Ketoacyl-synthetase C-terminal extension SVI_RS13775 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS13780 PF03466 LysR substrate binding domain SVI_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS13790 PF00925 GTP cyclohydrolase II SVI_RS13795 PF10928 Protein of unknown function (DUF2810) SVI_RS13805 PF03477 ATP cone domain SVI_RS13805 PF13597 Anaerobic ribonucleoside-triphosphate reductase SVI_RS13815 PF01047 MarR family SVI_RS13820 PF00107 Zinc-binding dehydrogenase SVI_RS13820 PF16884 N-terminal domain of oxidoreductase SVI_RS13825 PF01734 Patatin-like phospholipase SVI_RS13830 PF01389 OmpA-like transmembrane domain SVI_RS13830 PF00691 OmpA family SVI_RS13845 PF01863 Protein of unknown function DUF45 SVI_RS13860 PF14310 Fibronectin type III-like domain SVI_RS13860 PF00933 Glycosyl hydrolase family 3 N terminal domain SVI_RS13860 PF01915 Glycosyl hydrolase family 3 C-terminal domain SVI_RS13865 PF01551 Peptidase family M23 SVI_RS13865 PF04225 Opacity-associated protein A LysM-like domain SVI_RS13870 PF13476 AAA domain SVI_RS13875 PF12320 Type 5 capsule protein repressor C-terminal domain SVI_RS13875 PF00149 Calcineurin-like phosphoesterase SVI_RS13880 PF00155 Aminotransferase class I and II SVI_RS13885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS13885 PF02743 Cache domain SVI_RS13885 PF00672 HAMP domain SVI_RS13890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS13890 PF00672 HAMP domain SVI_RS13890 PF02743 Cache domain SVI_RS13900 PF01925 Sulfite exporter TauE/SafE SVI_RS13905 PF03466 LysR substrate binding domain SVI_RS13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS13930 PF05698 Bacterial trigger factor protein (TF) C-terminus SVI_RS13950 PF03544 Gram-negative bacterial TonB protein C-terminal SVI_RS13955 PF02472 Biopolymer transport protein ExbD/TolR SVI_RS13960 PF01618 MotA/TolQ/ExbB proton channel family SVI_RS13965 PF01618 MotA/TolQ/ExbB proton channel family SVI_RS13980 PF07715 TonB-dependent Receptor Plug Domain SVI_RS13980 PF00593 TonB dependent receptor SVI_RS13985 PF13505 Outer membrane protein beta-barrel domain SVI_RS13990 PF00136 DNA polymerase family B SVI_RS13990 PF03104 DNA polymerase family B, exonuclease domain SVI_RS13995 PF13307 Helicase C-terminal domain SVI_RS13995 PF06733 DEAD_2 SVI_RS14000 PF01925 Sulfite exporter TauE/SafE SVI_RS14010 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SVI_RS14020 PF10531 SLBB domain SVI_RS14025 PF01053 Cys/Met metabolism PLP-dependent enzyme SVI_RS14030 PF05128 Domain of unknown function (DUF697) SVI_RS14035 PF04317 YcjX-like family, DUF463 SVI_RS14050 PF04012 PspA/IM30 family SVI_RS14055 PF00158 Sigma-54 interaction domain SVI_RS14055 PF02954 Bacterial regulatory protein, Fis family SVI_RS14060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SVI_RS14065 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS14070 PF12911 N-terminal TM domain of oligopeptide transport permease C SVI_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS14075 PF00005 ABC transporter SVI_RS14075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SVI_RS14080 PF00005 ABC transporter SVI_RS14085 PF07055 Enoyl reductase FAD binding domain SVI_RS14085 PF12241 Trans-2-enoyl-CoA reductase catalytic region SVI_RS14085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase SVI_RS14095 PF13145 PPIC-type PPIASE domain SVI_RS14100 PF00216 Bacterial DNA-binding protein SVI_RS14105 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS14105 PF05362 Lon protease (S16) C-terminal proteolytic domain SVI_RS14105 PF02190 ATP-dependent protease La (LON) substrate-binding domain SVI_RS14115 PF00574 Clp protease SVI_RS14120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS14120 PF05698 Bacterial trigger factor protein (TF) C-terminus SVI_RS14120 PF05697 Bacterial trigger factor protein (TF) SVI_RS14140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SVI_RS14140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SVI_RS14145 PF01406 tRNA synthetases class I (C) catalytic domain SVI_RS14145 PF09190 DALR domain SVI_RS14150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SVI_RS14155 PF00149 Calcineurin-like phosphoesterase SVI_RS14160 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) SVI_RS14170 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SVI_RS14170 PF00749 tRNA synthetases class I (E and Q), catalytic domain SVI_RS14175 PF02421 Ferrous iron transport protein B SVI_RS14175 PF07670 Nucleoside recognition SVI_RS14175 PF07664 Ferrous iron transport protein B C terminus SVI_RS14185 PF05230 MASE2 domain SVI_RS14185 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS14235 PF02595 Glycerate kinase family SVI_RS14240 PF00282 Pyridoxal-dependent decarboxylase conserved domain SVI_RS14255 PF01297 Zinc-uptake complex component A periplasmic SVI_RS14260 PF00005 ABC transporter SVI_RS14265 PF00950 ABC 3 transport family SVI_RS14270 PF00950 ABC 3 transport family SVI_RS14275 PF04134 Protein of unknown function, DUF393 SVI_RS14285 PF03591 AzlC protein SVI_RS14320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS14320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS14320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS14320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS14325 PF00849 RNA pseudouridylate synthase SVI_RS14340 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SVI_RS14345 PF00501 AMP-binding enzyme SVI_RS14350 PF00561 alpha/beta hydrolase fold SVI_RS14355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SVI_RS14355 PF00108 Thiolase, N-terminal domain SVI_RS14375 PF01844 HNH endonuclease SVI_RS14385 PF01895 PhoU domain SVI_RS14390 PF00005 ABC transporter SVI_RS14395 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS14400 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS14420 PF00593 TonB dependent receptor SVI_RS14420 PF07715 TonB-dependent Receptor Plug Domain SVI_RS14425 PF00561 alpha/beta hydrolase fold SVI_RS14445 PF01810 LysE type translocator SVI_RS14480 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS14485 PF01230 HIT domain SVI_RS14500 PF04303 PrpF protein SVI_RS14505 PF00330 Aconitase family (aconitate hydratase) SVI_RS14505 PF00694 Aconitase C-terminal domain SVI_RS14510 PF00285 Citrate synthase, C-terminal domain SVI_RS14520 PF00392 Bacterial regulatory proteins, gntR family SVI_RS14520 PF07729 FCD domain SVI_RS14525 PF07715 TonB-dependent Receptor Plug Domain SVI_RS14525 PF00593 TonB dependent receptor SVI_RS14535 PF00883 Cytosol aminopeptidase family, catalytic domain SVI_RS14535 PF02789 Cytosol aminopeptidase family, N-terminal domain SVI_RS14540 PF07670 Nucleoside recognition SVI_RS14540 PF07662 Na+ dependent nucleoside transporter C-terminus SVI_RS14540 PF01773 Na+ dependent nucleoside transporter N-terminus SVI_RS14545 PF02798 Glutathione S-transferase, N-terminal domain SVI_RS14555 PF00005 ABC transporter SVI_RS14555 PF12848 ABC transporter SVI_RS14560 PF00403 Heavy-metal-associated domain SVI_RS14565 PF13411 MerR HTH family regulatory protein SVI_RS14580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SVI_RS14580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SVI_RS14585 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS14590 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS14595 PF02770 Acyl-CoA dehydrogenase, middle domain SVI_RS14595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SVI_RS14595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SVI_RS14600 PF00171 Aldehyde dehydrogenase family SVI_RS14605 PF02803 Thiolase, C-terminal domain SVI_RS14605 PF00108 Thiolase, N-terminal domain SVI_RS14615 PF05547 Immune inhibitor A peptidase M6 SVI_RS14615 PF00801 PKD domain SVI_RS14620 PF04204 Homoserine O-succinyltransferase SVI_RS14640 PF03922 OmpW family SVI_RS14665 PF00106 short chain dehydrogenase SVI_RS14670 PF01040 UbiA prenyltransferase family SVI_RS14710 PF00849 RNA pseudouridylate synthase SVI_RS14715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SVI_RS14715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SVI_RS14725 PF02803 Thiolase, C-terminal domain SVI_RS14725 PF00108 Thiolase, N-terminal domain SVI_RS14730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SVI_RS14730 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS14730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SVI_RS14735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SVI_RS14735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SVI_RS14750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SVI_RS14775 PF01594 AI-2E family transporter SVI_RS14780 PF07969 Amidohydrolase family SVI_RS14785 PF14684 Tricorn protease C1 domain SVI_RS14785 PF03572 Peptidase family S41 SVI_RS14785 PF14685 Tricorn protease PDZ domain SVI_RS14785 PF07676 WD40-like Beta Propeller Repeat SVI_RS14800 PF12450 von Willebrand factor SVI_RS14800 PF00092 von Willebrand factor type A domain SVI_RS14800 PF12034 Domain of unknown function (DUF3520) SVI_RS14805 PF00731 AIR carboxylase SVI_RS14820 PF04262 Glutamate-cysteine ligase SVI_RS14825 PF00675 Insulinase (Peptidase family M16) SVI_RS14825 PF05193 Peptidase M16 inactive domain SVI_RS14830 PF09335 SNARE associated Golgi protein SVI_RS14835 PF00375 Sodium:dicarboxylate symporter family SVI_RS14845 PF07517 SecA DEAD-like domain SVI_RS14845 PF02810 SEC-C motif SVI_RS14845 PF07516 SecA Wing and Scaffold domain SVI_RS14845 PF01043 SecA preprotein cross-linking domain SVI_RS14855 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SVI_RS14860 PF00364 Biotin-requiring enzyme SVI_RS14860 PF00682 HMGL-like SVI_RS14860 PF02436 Conserved carboxylase domain SVI_RS14950 PF02599 Global regulator protein family SVI_RS14955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SVI_RS14955 PF02272 DHHA1 domain SVI_RS14955 PF01411 tRNA synthetases class II (A) SVI_RS14960 PF00154 recA bacterial DNA recombination protein SVI_RS14965 PF05192 MutS domain III SVI_RS14965 PF05190 MutS family domain IV SVI_RS14965 PF05188 MutS domain II SVI_RS14965 PF01624 MutS domain I SVI_RS14965 PF00488 MutS domain V SVI_RS14970 PF04545 Sigma-70, region 4 SVI_RS14970 PF04539 Sigma-70 region 3 SVI_RS14970 PF04542 Sigma-70 region 2 SVI_RS14970 PF00140 Sigma-70 factor, region 1.2 SVI_RS14975 PF01476 LysM domain SVI_RS14975 PF01551 Peptidase family M23 SVI_RS14985 PF01975 Survival protein SurE SVI_RS14990 PF01142 tRNA pseudouridine synthase D (TruD) SVI_RS14995 PF02542 YgbB family SVI_RS15000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SVI_RS15005 PF04977 Septum formation initiator SVI_RS15010 PF00113 Enolase, C-terminal TIM barrel domain SVI_RS15010 PF03952 Enolase, N-terminal domain SVI_RS15015 PF00117 Glutamine amidotransferase class-I SVI_RS15015 PF06418 CTP synthase N-terminus SVI_RS15020 PF03819 MazG nucleotide pyrophosphohydrolase domain SVI_RS15025 PF02824 TGS domain SVI_RS15025 PF13291 ACT domain SVI_RS15025 PF04607 Region found in RelA / SpoT proteins SVI_RS15030 PF05958 tRNA (Uracil-5-)-methyltransferase SVI_RS15030 PF01938 TRAM domain SVI_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS15035 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS15035 PF01627 Hpt domain SVI_RS15035 PF00072 Response regulator receiver domain SVI_RS15035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SVI_RS15035 PF00672 HAMP domain SVI_RS15050 PF02463 RecF/RecN/SMC N terminal domain SVI_RS15065 PF00117 Glutamine amidotransferase class-I SVI_RS15075 PF03473 MOSC domain SVI_RS15075 PF03475 3-alpha domain SVI_RS15080 PF04608 Phosphatidylglycerophosphatase A SVI_RS15085 PF02769 AIR synthase related protein, C-terminal domain SVI_RS15085 PF00586 AIR synthase related protein, N-terminal domain SVI_RS15090 PF01029 NusB family SVI_RS15095 PF00885 6,7-dimethyl-8-ribityllumazine synthase SVI_RS15100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SVI_RS15100 PF00925 GTP cyclohydrolase II SVI_RS15105 PF00677 Lumazine binding domain SVI_RS15110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SVI_RS15110 PF01872 RibD C-terminal domain SVI_RS15115 PF03477 ATP cone domain SVI_RS15120 PF00464 Serine hydroxymethyltransferase SVI_RS15125 PF00005 ABC transporter SVI_RS15125 PF12848 ABC transporter SVI_RS15135 PF00704 Glycosyl hydrolases family 18 SVI_RS15135 PF06483 Chitinase C SVI_RS15145 PF04237 YjbR SVI_RS15150 PF11737 Protein of unknown function (DUF3300) SVI_RS15155 PF00849 RNA pseudouridylate synthase SVI_RS15155 PF01479 S4 domain SVI_RS15160 PF07715 TonB-dependent Receptor Plug Domain SVI_RS15160 PF00593 TonB dependent receptor SVI_RS15175 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS15175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS15180 PF00873 AcrB/AcrD/AcrF family SVI_RS15185 PF07690 Major Facilitator Superfamily SVI_RS15190 PF01053 Cys/Met metabolism PLP-dependent enzyme SVI_RS15210 PF00271 Helicase conserved C-terminal domain SVI_RS15210 PF00270 DEAD/DEAH box helicase SVI_RS15215 PF00563 EAL domain SVI_RS15215 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS15215 PF03707 Bacterial signalling protein N terminal repeat SVI_RS15225 PF03707 Bacterial signalling protein N terminal repeat SVI_RS15225 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS15225 PF00563 EAL domain SVI_RS15235 PF01136 Peptidase family U32 SVI_RS15235 PF16325 Peptidase family U32 C-terminal domain SVI_RS15240 PF00037 4Fe-4S binding domain SVI_RS15265 PF09278 MerR, DNA binding SVI_RS15265 PF00376 MerR family regulatory protein SVI_RS15270 PF02036 SCP-2 sterol transfer family SVI_RS15275 PF01136 Peptidase family U32 SVI_RS15280 PF01136 Peptidase family U32 SVI_RS15285 PF12729 Four helix bundle sensory module for signal transduction SVI_RS15285 PF00672 HAMP domain SVI_RS15285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS15290 PF07670 Nucleoside recognition SVI_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS15295 PF12833 Helix-turn-helix domain SVI_RS15295 PF07494 Two component regulator propeller SVI_RS15295 PF00072 Response regulator receiver domain SVI_RS15295 PF07495 Y_Y_Y domain SVI_RS15295 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS15300 PF00571 CBS domain SVI_RS15305 PF00860 Permease family SVI_RS15315 PF03264 NapC/NirT cytochrome c family, N-terminal region SVI_RS15320 PF00384 Molybdopterin oxidoreductase SVI_RS15320 PF01568 Molydopterin dinucleotide binding domain SVI_RS15320 PF18364 Molybdopterin oxidoreductase N-terminal domain SVI_RS15325 PF02613 Nitrate reductase delta subunit SVI_RS15330 PF01180 Dihydroorotate dehydrogenase SVI_RS15335 PF00270 DEAD/DEAH box helicase SVI_RS15335 PF00271 Helicase conserved C-terminal domain SVI_RS15340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS15340 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS15340 PF01627 Hpt domain SVI_RS15340 PF00072 Response regulator receiver domain SVI_RS15340 PF00672 HAMP domain SVI_RS15350 PF00486 Transcriptional regulatory protein, C terminal SVI_RS15350 PF00072 Response regulator receiver domain SVI_RS15355 PF07238 PilZ domain SVI_RS15400 PF18073 Rubredoxin metal binding domain SVI_RS15415 PF18429 Domain of unknown function (DUF5609) SVI_RS15425 PF00665 Integrase core domain SVI_RS15425 PF13276 HTH-like domain SVI_RS15425 PF13333 Integrase core domain SVI_RS15430 PF01048 Phosphorylase superfamily SVI_RS15435 PF01676 Metalloenzyme superfamily SVI_RS15440 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SVI_RS15440 PF00591 Glycosyl transferase family, a/b domain SVI_RS15440 PF02885 Glycosyl transferase family, helical bundle domain SVI_RS15445 PF01791 DeoC/LacD family aldolase SVI_RS15450 PF03502 Nucleoside-specific channel-forming protein, Tsx SVI_RS15455 PF07670 Nucleoside recognition SVI_RS15455 PF07662 Na+ dependent nucleoside transporter C-terminus SVI_RS15455 PF01773 Na+ dependent nucleoside transporter N-terminus SVI_RS15460 PF01026 TatD related DNase SVI_RS15465 PF16658 Class II release factor RF3, C-terminal domain SVI_RS15465 PF00009 Elongation factor Tu GTP binding domain SVI_RS15470 PF07719 Tetratricopeptide repeat SVI_RS15470 PF13181 Tetratricopeptide repeat SVI_RS15475 PF00575 S1 RNA binding domain SVI_RS15475 PF03725 3' exoribonuclease family, domain 2 SVI_RS15475 PF01138 3' exoribonuclease family, domain 1 SVI_RS15475 PF00013 KH domain SVI_RS15475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SVI_RS15480 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS15480 PF03707 Bacterial signalling protein N terminal repeat SVI_RS15480 PF00563 EAL domain SVI_RS15485 PF00312 Ribosomal protein S15 SVI_RS15490 PF09157 Pseudouridine synthase II TruB, C-terminal SVI_RS15490 PF01509 TruB family pseudouridylate synthase (N terminal domain) SVI_RS15490 PF16198 tRNA pseudouridylate synthase B C-terminal domain SVI_RS15495 PF02033 Ribosome-binding factor A SVI_RS15500 PF11987 Translation-initiation factor 2 SVI_RS15500 PF00009 Elongation factor Tu GTP binding domain SVI_RS15500 PF04760 Translation initiation factor IF-2, N-terminal region SVI_RS15500 PF08364 Bacterial translation initiation factor IF-2 associated region SVI_RS15505 PF08529 NusA N-terminal domain SVI_RS15505 PF00575 S1 RNA binding domain SVI_RS15505 PF13184 NusA-like KH domain SVI_RS15510 PF17384 RimP C-terminal SH3 domain SVI_RS15510 PF02576 RimP N-terminal domain SVI_RS15525 PF03840 Preprotein translocase SecG subunit SVI_RS15530 PF00121 Triosephosphate isomerase SVI_RS15535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS15535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS15535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS15535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS15540 PF00809 Pterin binding enzyme SVI_RS15545 PF01434 Peptidase family M41 SVI_RS15545 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS15545 PF06480 FtsH Extracellular SVI_RS15545 PF17862 AAA+ lid domain SVI_RS15550 PF01728 FtsJ-like methyltransferase SVI_RS15555 PF01985 CRS1 / YhbY (CRM) domain SVI_RS15560 PF02355 Protein export membrane protein SVI_RS15560 PF07549 SecD/SecF GG Motif SVI_RS15565 PF13721 SecD export protein N-terminal TM region SVI_RS15565 PF07549 SecD/SecF GG Motif SVI_RS15565 PF02355 Protein export membrane protein SVI_RS15575 PF03449 Transcription elongation factor, N-terminal SVI_RS15575 PF01272 Transcription elongation factor, GreA/GreB, C-term SVI_RS15585 PF00672 HAMP domain SVI_RS15585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS15590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SVI_RS15590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS15590 PF02142 MGS-like domain SVI_RS15595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SVI_RS15595 PF00117 Glutamine amidotransferase class-I SVI_RS15600 PF01113 Dihydrodipicolinate reductase, N-terminus SVI_RS15600 PF05173 Dihydrodipicolinate reductase, C-terminus SVI_RS15605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SVI_RS15605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SVI_RS15620 PF00226 DnaJ domain SVI_RS15620 PF01556 DnaJ C terminal domain SVI_RS15620 PF00684 DnaJ central domain SVI_RS15625 PF00012 Hsp70 protein SVI_RS15655 PF00583 Acetyltransferase (GNAT) family SVI_RS15665 PF00171 Aldehyde dehydrogenase family SVI_RS15670 PF00696 Amino acid kinase family SVI_RS15670 PF01472 PUA domain SVI_RS15675 PF00860 Permease family SVI_RS15680 PF00883 Cytosol aminopeptidase family, catalytic domain SVI_RS15680 PF02789 Cytosol aminopeptidase family, N-terminal domain SVI_RS15685 PF01546 Peptidase family M20/M25/M40 SVI_RS15685 PF07687 Peptidase dimerisation domain SVI_RS15690 PF11798 IMS family HHH motif SVI_RS15690 PF11799 impB/mucB/samB family C-terminal domain SVI_RS15690 PF00817 impB/mucB/samB family SVI_RS15695 PF00756 Putative esterase SVI_RS15700 PF00107 Zinc-binding dehydrogenase SVI_RS15700 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS15705 PF01258 Prokaryotic dksA/traR C4-type zinc finger SVI_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS15710 PF03466 LysR substrate binding domain SVI_RS15720 PF04400 (Na+)-NQR maturation NqrM SVI_RS15725 PF02424 ApbE family SVI_RS15730 PF00175 Oxidoreductase NAD-binding domain SVI_RS15730 PF00111 2Fe-2S iron-sulfur cluster binding domain SVI_RS15730 PF00970 Oxidoreductase FAD-binding domain SVI_RS15735 PF02508 Rnf-Nqr subunit, membrane protein SVI_RS15740 PF02508 Rnf-Nqr subunit, membrane protein SVI_RS15745 PF04205 FMN-binding domain SVI_RS15750 PF03116 NQR2, RnfD, RnfE family SVI_RS15755 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SVI_RS15755 PF11973 NQRA C-terminal domain SVI_RS15760 PF02664 S-Ribosylhomocysteinase (LuxS) SVI_RS15765 PF01722 BolA-like protein SVI_RS15775 PF05175 Methyltransferase small domain SVI_RS15795 PF04116 Fatty acid hydroxylase superfamily SVI_RS15810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SVI_RS15820 PF07690 Major Facilitator Superfamily SVI_RS15825 PF04461 Protein of unknown function (DUF520) SVI_RS15835 PF02558 Ketopantoate reductase PanE/ApbA SVI_RS15835 PF08546 Ketopantoate reductase PanE/ApbA C terminal SVI_RS15840 PF00209 Sodium:neurotransmitter symporter family SVI_RS15855 PF00793 DAHP synthetase I family SVI_RS15925 PF00005 ABC transporter SVI_RS15925 PF03412 Peptidase C39 family SVI_RS15925 PF00664 ABC transporter transmembrane region SVI_RS15930 PF00589 Phage integrase family SVI_RS15930 PF02899 Phage integrase, N-terminal SAM-like domain SVI_RS15935 PF17827 PrmC N-terminal domain SVI_RS15935 PF13847 Methyltransferase domain SVI_RS15940 PF00472 RF-1 domain SVI_RS15940 PF03462 PCRF domain SVI_RS15945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SVI_RS15945 PF01488 Shikimate / quinate 5-dehydrogenase SVI_RS15945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SVI_RS15950 PF03550 Outer membrane lipoprotein LolB SVI_RS15955 PF00288 GHMP kinases N terminal domain SVI_RS15955 PF08544 GHMP kinases C terminal SVI_RS15960 PF14572 Phosphoribosyl synthetase-associated domain SVI_RS15960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SVI_RS16010 PF06071 Protein of unknown function (DUF933) SVI_RS16010 PF01926 50S ribosome-binding GTPase SVI_RS16015 PF01195 Peptidyl-tRNA hydrolase SVI_RS16020 PF01494 FAD binding domain SVI_RS16030 PF04055 Radical SAM superfamily SVI_RS16030 PF01938 TRAM domain SVI_RS16030 PF00919 Uncharacterized protein family UPF0004 SVI_RS16035 PF02562 PhoH-like protein SVI_RS16040 PF02130 Uncharacterized protein family UPF0054 SVI_RS16045 PF00571 CBS domain SVI_RS16045 PF03471 Transporter associated domain SVI_RS16050 PF00795 Carbon-nitrogen hydrolase SVI_RS16055 PF01204 Trehalase SVI_RS16065 PF00133 tRNA synthetases class I (I, L, M and V) SVI_RS16065 PF13603 Leucyl-tRNA synthetase, Domain 2 SVI_RS16065 PF08264 Anticodon-binding domain of tRNA SVI_RS16070 PF04390 Lipopolysaccharide-assembly SVI_RS16080 PF01467 Cytidylyltransferase-like SVI_RS16090 PF02590 Predicted SPOUT methyltransferase SVI_RS16095 PF03717 Penicillin-binding Protein dimerisation domain SVI_RS16095 PF00905 Penicillin binding protein transpeptidase domain SVI_RS16100 PF01098 Cell cycle protein SVI_RS16105 PF13406 Transglycosylase SLT domain SVI_RS16110 PF05036 Sporulation related domain SVI_RS16110 PF03330 Lytic transglycolase SVI_RS16115 PF07943 Penicillin-binding protein 5, C-terminal domain SVI_RS16115 PF00768 D-alanyl-D-alanine carboxypeptidase SVI_RS16120 PF04359 Protein of unknown function (DUF493) SVI_RS16125 PF03099 Biotin/lipoate A/B protein ligase family SVI_RS16130 PF04055 Radical SAM superfamily SVI_RS16145 PF00210 Ferritin-like domain SVI_RS16180 PF01066 CDP-alcohol phosphatidyltransferase SVI_RS16195 PF07724 AAA domain (Cdc48 subfamily) SVI_RS16195 PF02861 Clp amino terminal domain, pathogenicity island component SVI_RS16195 PF17871 AAA lid domain SVI_RS16195 PF00004 ATPase family associated with various cellular activities (AAA) SVI_RS16195 PF10431 C-terminal, D2-small domain, of ClpB protein SVI_RS16200 PF02578 Multi-copper polyphenol oxidoreductase laccase SVI_RS16205 PF00849 RNA pseudouridylate synthase SVI_RS16205 PF01479 S4 domain SVI_RS16210 PF13525 Outer membrane lipoprotein SVI_RS16220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS16220 PF00672 HAMP domain SVI_RS16225 PF02423 Ornithine cyclodeaminase/mu-crystallin family SVI_RS16235 PF00849 RNA pseudouridylate synthase SVI_RS16235 PF01479 S4 domain SVI_RS16240 PF01431 Peptidase family M13 SVI_RS16240 PF05649 Peptidase family M13 SVI_RS16260 PF14497 Glutathione S-transferase, C-terminal domain SVI_RS16260 PF02798 Glutathione S-transferase, N-terminal domain SVI_RS16265 PF00593 TonB dependent receptor SVI_RS16265 PF07715 TonB-dependent Receptor Plug Domain SVI_RS16270 PF12431 Transcriptional regulator SVI_RS16270 PF00072 Response regulator receiver domain SVI_RS16275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SVI_RS16275 PF00989 PAS fold SVI_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS16275 PF17203 Single cache domain 3 SVI_RS16280 PF01970 Tripartite tricarboxylate transporter TctA family SVI_RS16295 PF07396 Phosphate-selective porin O and P SVI_RS16315 PF03949 Malic enzyme, NAD binding domain SVI_RS16315 PF00390 Malic enzyme, N-terminal domain SVI_RS16340 PF00962 Adenosine/AMP deaminase SVI_RS16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS16345 PF00672 HAMP domain SVI_RS16345 PF17200 Single Cache domain 2 SVI_RS16355 PF08331 Domain of unknown function (DUF1730) SVI_RS16360 PF07311 Dodecin SVI_RS16365 PF03472 Autoinducer binding domain SVI_RS16365 PF00196 Bacterial regulatory proteins, luxR family SVI_RS16390 PF02683 Cytochrome C biogenesis protein transmembrane region SVI_RS16390 PF11412 Disulphide bond corrector protein DsbC SVI_RS16400 PF01645 Conserved region in glutamate synthase SVI_RS16405 PF01717 Cobalamin-independent synthase, Catalytic domain SVI_RS16405 PF08267 Cobalamin-independent synthase, N-terminal domain SVI_RS16410 PF03466 LysR substrate binding domain SVI_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS16425 PF07715 TonB-dependent Receptor Plug Domain SVI_RS16425 PF00593 TonB dependent receptor SVI_RS16430 PF03965 Penicillinase repressor SVI_RS16440 PF05656 Protein of unknown function (DUF805) SVI_RS16445 PF00127 Copper binding proteins, plastocyanin/azurin family SVI_RS16455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SVI_RS16455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SVI_RS16470 PF07690 Major Facilitator Superfamily SVI_RS16475 PF03466 LysR substrate binding domain SVI_RS16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS16485 PF01979 Amidohydrolase family SVI_RS16510 PF00561 alpha/beta hydrolase fold SVI_RS16520 PF02554 Carbon starvation protein CstA SVI_RS16525 PF01435 Peptidase family M48 SVI_RS16525 PF13181 Tetratricopeptide repeat SVI_RS16535 PF00211 Adenylate and Guanylate cyclase catalytic domain SVI_RS16540 PF01966 HD domain SVI_RS16545 PF02798 Glutathione S-transferase, N-terminal domain SVI_RS16545 PF00043 Glutathione S-transferase, C-terminal domain SVI_RS16550 PF09411 Lipid A 3-O-deacylase (PagL) SVI_RS16565 PF09905 DNA-binding protein VF530 SVI_RS16570 PF02253 Phospholipase A1 SVI_RS16575 PF00202 Aminotransferase class-III SVI_RS16590 PF00313 'Cold-shock' DNA-binding domain SVI_RS16605 PF18267 Rubredoxin NAD+ reductase C-terminal domain SVI_RS16605 PF04324 BFD-like [2Fe-2S] binding domain SVI_RS16605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SVI_RS16605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SVI_RS16605 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS16610 PF13806 Rieske-like [2Fe-2S] domain SVI_RS16615 PF01226 Formate/nitrite transporter SVI_RS16620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SVI_RS16620 PF10414 Sirohaem synthase dimerisation region SVI_RS16620 PF14824 Sirohaem biosynthesis protein central SVI_RS16645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SVI_RS16655 PF02347 Glycine cleavage system P-protein SVI_RS16660 PF01597 Glycine cleavage H-protein SVI_RS16665 PF01571 Aminomethyltransferase folate-binding domain SVI_RS16665 PF08669 Glycine cleavage T-protein C-terminal barrel domain SVI_RS16670 PF01494 FAD binding domain SVI_RS16675 PF01494 FAD binding domain SVI_RS16680 PF03695 Uncharacterised protein family (UPF0149) SVI_RS16685 PF05164 Cell division protein ZapA SVI_RS16690 PF01812 5-formyltetrahydrofolate cyclo-ligase family SVI_RS16705 PF08453 Peptidase family M9 N-terminal SVI_RS16705 PF01752 Collagenase SVI_RS16710 PF03167 Uracil DNA glycosylase superfamily SVI_RS16715 PF07963 Prokaryotic N-terminal methylation motif SVI_RS16735 PF00158 Sigma-54 interaction domain SVI_RS16735 PF01590 GAF domain SVI_RS16740 PF13746 4Fe-4S dicluster domain SVI_RS16740 PF12801 4Fe-4S binding domain SVI_RS16740 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SVI_RS16745 PF00501 AMP-binding enzyme SVI_RS16745 PF13193 AMP-binding enzyme C-terminal domain SVI_RS16775 PF00664 ABC transporter transmembrane region SVI_RS16775 PF00005 ABC transporter SVI_RS16780 PF01243 Pyridoxamine 5'-phosphate oxidase SVI_RS16785 PF06228 Haem utilisation ChuX/HutX SVI_RS16790 PF07715 TonB-dependent Receptor Plug Domain SVI_RS16790 PF00593 TonB dependent receptor SVI_RS16795 PF03544 Gram-negative bacterial TonB protein C-terminal SVI_RS16800 PF01618 MotA/TolQ/ExbB proton channel family SVI_RS16805 PF02472 Biopolymer transport protein ExbD/TolR SVI_RS16810 PF01497 Periplasmic binding protein SVI_RS16815 PF01032 FecCD transport family SVI_RS16820 PF00005 ABC transporter SVI_RS16825 PF04055 Radical SAM superfamily SVI_RS16835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SVI_RS16845 PF00849 RNA pseudouridylate synthase SVI_RS16850 PF07715 TonB-dependent Receptor Plug Domain SVI_RS16850 PF00593 TonB dependent receptor SVI_RS16855 PF00672 HAMP domain SVI_RS16855 PF00909 Ammonium Transporter Family SVI_RS16865 PF01336 OB-fold nucleic acid binding domain SVI_RS16865 PF00152 tRNA synthetases class II (D, K and N) SVI_RS16870 PF00472 RF-1 domain SVI_RS16870 PF03462 PCRF domain SVI_RS16880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SVI_RS16880 PF01266 FAD dependent oxidoreductase SVI_RS16885 PF01047 MarR family SVI_RS16900 PF01590 GAF domain SVI_RS16900 PF00563 EAL domain SVI_RS16900 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS16900 PF00360 Phytochrome region SVI_RS16905 PF07992 Pyridine nucleotide-disulphide oxidoreductase SVI_RS16905 PF13192 Thioredoxin domain SVI_RS16910 PF10417 C-terminal domain of 1-Cys peroxiredoxin SVI_RS16910 PF00578 AhpC/TSA family SVI_RS16925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SVI_RS16925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SVI_RS16945 PF00486 Transcriptional regulatory protein, C terminal SVI_RS16950 PF00849 RNA pseudouridylate synthase SVI_RS16955 PF01037 Lrp/AsnC ligand binding domain SVI_RS16960 PF13860 FlgD Ig-like domain SVI_RS16960 PF00082 Subtilase family SVI_RS16960 PF02225 PA domain SVI_RS16960 PF05922 Peptidase inhibitor I9 SVI_RS16970 PF00696 Amino acid kinase family SVI_RS16970 PF01842 ACT domain SVI_RS16980 PF00072 Response regulator receiver domain SVI_RS16980 PF00486 Transcriptional regulatory protein, C terminal SVI_RS16985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SVI_RS16985 PF00326 Prolyl oligopeptidase family SVI_RS16990 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SVI_RS16995 PF00375 Sodium:dicarboxylate symporter family SVI_RS17015 PF01235 Sodium:alanine symporter family SVI_RS17050 PF14814 Bifunctional transglycosylase second domain SVI_RS17050 PF00912 Transglycosylase SVI_RS17050 PF00905 Penicillin binding protein transpeptidase domain SVI_RS17055 PF00270 DEAD/DEAH box helicase SVI_RS17055 PF04408 Helicase associated domain (HA2) SVI_RS17055 PF00271 Helicase conserved C-terminal domain SVI_RS17055 PF08482 ATP-dependent helicase C-terminal SVI_RS17065 PF00883 Cytosol aminopeptidase family, catalytic domain SVI_RS17065 PF12404 Peptidase SVI_RS17070 PF03749 Sugar fermentation stimulation protein RE domain SVI_RS17070 PF17746 SfsA N-terminal OB domain SVI_RS17075 PF01258 Prokaryotic dksA/traR C4-type zinc finger SVI_RS17080 PF00749 tRNA synthetases class I (E and Q), catalytic domain SVI_RS17085 PF12626 Polymerase A arginine-rich C-terminus SVI_RS17085 PF01743 Poly A polymerase head domain SVI_RS17085 PF12627 Probable RNA and SrmB- binding site of polymerase A SVI_RS17090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SVI_RS17095 PF02548 Ketopantoate hydroxymethyltransferase SVI_RS17100 PF02569 Pantoate-beta-alanine ligase SVI_RS17115 PF01061 ABC-2 type transporter SVI_RS17120 PF00005 ABC transporter SVI_RS17125 PF00156 Phosphoribosyl transferase domain SVI_RS17130 PF02441 Flavoprotein SVI_RS17135 PF02875 Mur ligase family, glutamate ligase domain SVI_RS17135 PF01225 Mur ligase family, catalytic domain SVI_RS17135 PF08245 Mur ligase middle domain SVI_RS17140 PF08755 Hemimethylated DNA-binding protein YccV like SVI_RS17165 PF00579 tRNA synthetases class I (W and Y) SVI_RS17170 PF00999 Sodium/hydrogen exchanger family SVI_RS17170 PF03471 Transporter associated domain SVI_RS17170 PF02080 TrkA-C domain SVI_RS17175 PF01790 Prolipoprotein diacylglyceryl transferase SVI_RS17180 PF00171 Aldehyde dehydrogenase family SVI_RS17185 PF03466 LysR substrate binding domain SVI_RS17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS17215 PF03553 Na+/H+ antiporter family SVI_RS17225 PF01479 S4 domain SVI_RS17225 PF00849 RNA pseudouridylate synthase SVI_RS17240 PF10459 Peptidase S46 SVI_RS17245 PF03222 Tryptophan/tyrosine permease family SVI_RS17250 PF01169 Uncharacterized protein family UPF0016 SVI_RS17255 PF06628 Catalase-related immune-responsive SVI_RS17255 PF00199 Catalase SVI_RS17265 PF03061 Thioesterase superfamily SVI_RS17275 PF00072 Response regulator receiver domain SVI_RS17275 PF00196 Bacterial regulatory proteins, luxR family SVI_RS17280 PF09997 Predicted membrane protein (DUF2238) SVI_RS17285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SVI_RS17285 PF01842 ACT domain SVI_RS17285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SVI_RS17290 PF01571 Aminomethyltransferase folate-binding domain SVI_RS17310 PF00005 ABC transporter SVI_RS17315 PF02687 FtsX-like permease family SVI_RS17315 PF12704 MacB-like periplasmic core domain SVI_RS17325 PF13599 Pentapeptide repeats (9 copies) SVI_RS17335 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS17335 PF03707 Bacterial signalling protein N terminal repeat SVI_RS17335 PF00563 EAL domain SVI_RS17350 PF02785 Biotin carboxylase C-terminal domain SVI_RS17350 PF00289 Biotin carboxylase, N-terminal domain SVI_RS17350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS17355 PF03466 LysR substrate binding domain SVI_RS17365 PF10263 SprT-like family SVI_RS17370 PF04231 Endonuclease I SVI_RS17375 PF04452 RNA methyltransferase SVI_RS17380 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SVI_RS17380 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SVI_RS17385 PF00245 Alkaline phosphatase SVI_RS17390 PF03707 Bacterial signalling protein N terminal repeat SVI_RS17390 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS17390 PF00563 EAL domain SVI_RS17405 PF05175 Methyltransferase small domain SVI_RS17405 PF08468 Methyltransferase small domain N-terminal SVI_RS17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS17430 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS17430 PF00497 Bacterial extracellular solute-binding proteins, family 3 SVI_RS17435 PF00899 ThiF family SVI_RS17445 PF05724 Thiopurine S-methyltransferase (TPMT) SVI_RS17460 PF04186 FxsA cytoplasmic membrane protein SVI_RS17465 PF03091 CutA1 divalent ion tolerance protein SVI_RS17470 PF11412 Disulphide bond corrector protein DsbC SVI_RS17470 PF02683 Cytochrome C biogenesis protein transmembrane region SVI_RS17475 PF02254 TrkA-N domain SVI_RS17475 PF00999 Sodium/hydrogen exchanger family SVI_RS17485 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SVI_RS17485 PF02929 Beta galactosidase small chain SVI_RS17485 PF16353 Domain of unknown function(DUF4981) SVI_RS17485 PF00703 Glycosyl hydrolases family 2 SVI_RS17485 PF02837 Glycosyl hydrolases family 2, sugar binding domain SVI_RS17490 PF00474 Sodium:solute symporter family SVI_RS17495 PF00288 GHMP kinases N terminal domain SVI_RS17495 PF08544 GHMP kinases C terminal SVI_RS17495 PF10509 Galactokinase galactose-binding signature SVI_RS17500 PF01263 Aldose 1-epimerase SVI_RS17510 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS17510 PF00698 Acyl transferase domain SVI_RS17510 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS17510 PF00550 Phosphopantetheine attachment site SVI_RS17510 PF14765 Polyketide synthase dehydratase SVI_RS17510 PF16197 Ketoacyl-synthetase C-terminal extension SVI_RS17510 PF08659 KR domain SVI_RS17510 PF08240 Alcohol dehydrogenase GroES-like domain SVI_RS17515 PF08453 Peptidase family M9 N-terminal SVI_RS17515 PF01752 Collagenase SVI_RS17525 PF00082 Subtilase family SVI_RS17540 PF03783 Curli production assembly/transport component CsgG SVI_RS17555 PF00436 Single-strand binding protein family SVI_RS17560 PF07690 Major Facilitator Superfamily SVI_RS17565 PF00005 ABC transporter SVI_RS17565 PF17755 UvrA DNA-binding domain SVI_RS17565 PF17760 UvrA interaction domain SVI_RS17570 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS17570 PF04389 Peptidase family M28 SVI_RS17575 PF00270 DEAD/DEAH box helicase SVI_RS17575 PF00271 Helicase conserved C-terminal domain SVI_RS17575 PF12343 Cold shock protein DEAD box A SVI_RS17575 PF03880 DbpA RNA binding domain SVI_RS17600 PF02585 GlcNAc-PI de-N-acetylase SVI_RS17615 PF02219 Methylenetetrahydrofolate reductase SVI_RS17620 PF03447 Homoserine dehydrogenase, NAD binding domain SVI_RS17620 PF00742 Homoserine dehydrogenase SVI_RS17620 PF00696 Amino acid kinase family SVI_RS17625 PF01053 Cys/Met metabolism PLP-dependent enzyme SVI_RS17630 PF01340 Met Apo-repressor, MetJ SVI_RS17645 PF03466 LysR substrate binding domain SVI_RS17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS17660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SVI_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS17665 PF03466 LysR substrate binding domain SVI_RS17675 PF00072 Response regulator receiver domain SVI_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS17680 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS17685 PF04321 RmlD substrate binding domain SVI_RS17705 PF00849 RNA pseudouridylate synthase SVI_RS17725 PF04074 YhcH/YjgK/YiaL SVI_RS17730 PF02264 LamB porin SVI_RS17735 PF00266 Aminotransferase class-V SVI_RS17740 PF03411 Penicillin-insensitive murein endopeptidase SVI_RS17770 PF00873 AcrB/AcrD/AcrF family SVI_RS17800 PF00472 RF-1 domain SVI_RS17805 PF01220 Dehydroquinase class II SVI_RS17810 PF00364 Biotin-requiring enzyme SVI_RS17815 PF00289 Biotin carboxylase, N-terminal domain SVI_RS17815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS17815 PF02785 Biotin carboxylase C-terminal domain SVI_RS17825 PF02785 Biotin carboxylase C-terminal domain SVI_RS17825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS17825 PF00289 Biotin carboxylase, N-terminal domain SVI_RS17840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SVI_RS17840 PF00289 Biotin carboxylase, N-terminal domain SVI_RS17840 PF02785 Biotin carboxylase C-terminal domain SVI_RS17875 PF01476 LysM domain SVI_RS17875 PF04972 BON domain SVI_RS17905 PF01569 PAP2 superfamily SVI_RS17915 PF03737 Aldolase/RraA SVI_RS17920 PF00491 Arginase family SVI_RS17925 PF01209 ubiE/COQ5 methyltransferase family SVI_RS17935 PF03109 ABC1 family SVI_RS17940 PF02416 mttA/Hcf106 family SVI_RS17945 PF02416 mttA/Hcf106 family SVI_RS17950 PF00902 Sec-independent protein translocase protein (TatC) SVI_RS17960 PF01026 TatD related DNase SVI_RS17965 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS17965 PF00360 Phytochrome region SVI_RS17965 PF00563 EAL domain SVI_RS17965 PF01590 GAF domain SVI_RS17970 PF00490 Delta-aminolevulinic acid dehydratase SVI_RS17985 PF00005 ABC transporter SVI_RS17985 PF00664 ABC transporter transmembrane region SVI_RS17985 PF03412 Peptidase C39 family SVI_RS17990 PF00529 HlyD membrane-fusion protein of T1SS SVI_RS17995 PF02321 Outer membrane efflux protein SVI_RS18010 PF00593 TonB dependent receptor SVI_RS18010 PF07715 TonB-dependent Receptor Plug Domain SVI_RS18015 PF00593 TonB dependent receptor SVI_RS18015 PF00593 TonB dependent receptor SVI_RS18020 PF02541 Ppx/GppA phosphatase family SVI_RS18025 PF00271 Helicase conserved C-terminal domain SVI_RS18025 PF00270 DEAD/DEAH box helicase SVI_RS18030 PF00085 Thioredoxin SVI_RS18035 PF07498 Rho termination factor, N-terminal domain SVI_RS18035 PF07497 Rho termination factor, RNA-binding domain SVI_RS18035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SVI_RS18045 PF01207 Dihydrouridine synthase (Dus) SVI_RS18050 PF02954 Bacterial regulatory protein, Fis family SVI_RS18055 PF04405 Domain of Unknown function (DUF542) SVI_RS18055 PF01814 Hemerythrin HHE cation binding domain SVI_RS18060 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS18065 PF00589 Phage integrase family SVI_RS18065 PF02899 Phage integrase, N-terminal SAM-like domain SVI_RS18075 PF01678 Diaminopimelate epimerase SVI_RS18080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SVI_RS18080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SVI_RS18085 PF01491 Frataxin-like domain SVI_RS18090 PF01295 Adenylate cyclase, class-I SVI_RS18090 PF12633 Adenylate cyclase NT domain SVI_RS18095 PF03900 Porphobilinogen deaminase, C-terminal domain SVI_RS18095 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SVI_RS18100 PF02602 Uroporphyrinogen-III synthase HemD SVI_RS18105 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SVI_RS18130 PF00005 ABC transporter SVI_RS18130 PF03412 Peptidase C39 family SVI_RS18130 PF00664 ABC transporter transmembrane region SVI_RS18140 PF02321 Outer membrane efflux protein SVI_RS18145 PF05736 OprF membrane domain SVI_RS18145 PF00691 OmpA family SVI_RS18190 PF03707 Bacterial signalling protein N terminal repeat SVI_RS18190 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS18190 PF00563 EAL domain SVI_RS18195 PF13361 UvrD-like helicase C-terminal domain SVI_RS18195 PF00580 UvrD/REP helicase N-terminal domain SVI_RS18200 PF00440 Bacterial regulatory proteins, tetR family SVI_RS18205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SVI_RS18210 PF00873 AcrB/AcrD/AcrF family SVI_RS18215 PF04380 Membrane fusogenic activity SVI_RS18220 PF01569 PAP2 superfamily SVI_RS18225 PF01037 Lrp/AsnC ligand binding domain SVI_RS18230 PF00209 Sodium:neurotransmitter symporter family SVI_RS18235 PF00266 Aminotransferase class-V SVI_RS18240 PF00585 C-terminal regulatory domain of Threonine dehydratase SVI_RS18240 PF00291 Pyridoxal-phosphate dependent enzyme SVI_RS18245 PF00920 Dehydratase family SVI_RS18250 PF01063 Amino-transferase class IV SVI_RS18260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SVI_RS18260 PF00205 Thiamine pyrophosphate enzyme, central domain SVI_RS18260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SVI_RS18265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SVI_RS18265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SVI_RS18270 PF03466 LysR substrate binding domain SVI_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS18275 PF02868 Thermolysin metallopeptidase, alpha-helical domain SVI_RS18275 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS18275 PF01447 Thermolysin metallopeptidase, catalytic domain SVI_RS18275 PF03413 Peptidase propeptide and YPEB domain SVI_RS18275 PF07504 Fungalysin/Thermolysin Propeptide Motif SVI_RS18280 PF06426 Serine acetyltransferase, N-terminal SVI_RS18280 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS18295 PF01040 UbiA prenyltransferase family SVI_RS18300 PF13361 UvrD-like helicase C-terminal domain SVI_RS18300 PF00580 UvrD/REP helicase N-terminal domain SVI_RS18305 PF01042 Endoribonuclease L-PSP SVI_RS18310 PF01145 SPFH domain / Band 7 family SVI_RS18315 PF01145 SPFH domain / Band 7 family SVI_RS18330 PF01048 Phosphorylase superfamily SVI_RS18350 PF00691 OmpA family SVI_RS18350 PF01389 OmpA-like transmembrane domain SVI_RS18355 PF03466 LysR substrate binding domain SVI_RS18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS18360 PF03466 LysR substrate binding domain SVI_RS18375 PF13673 Acetyltransferase (GNAT) domain SVI_RS18380 PF01709 Transcriptional regulator SVI_RS18390 PF00326 Prolyl oligopeptidase family SVI_RS18400 PF13411 MerR HTH family regulatory protein SVI_RS18405 PF02142 MGS-like domain SVI_RS18405 PF01808 AICARFT/IMPCHase bienzyme SVI_RS18410 PF02843 Phosphoribosylglycinamide synthetase, C domain SVI_RS18410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SVI_RS18410 PF02844 Phosphoribosylglycinamide synthetase, N domain SVI_RS18420 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS18420 PF08448 PAS fold SVI_RS18420 PF00563 EAL domain SVI_RS18435 PF00072 Response regulator receiver domain SVI_RS18435 PF00486 Transcriptional regulatory protein, C terminal SVI_RS18440 PF11808 Phosphate regulon sensor protein PhoR SVI_RS18440 PF00989 PAS fold SVI_RS18440 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS18445 PF01208 Uroporphyrinogen decarboxylase (URO-D) SVI_RS18450 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SVI_RS18455 PF00795 Carbon-nitrogen hydrolase SVI_RS18470 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS18480 PF10502 Signal peptidase, peptidase S26 SVI_RS18500 PF00072 Response regulator receiver domain SVI_RS18500 PF01584 CheW-like domain SVI_RS18510 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SVI_RS18515 PF00175 Oxidoreductase NAD-binding domain SVI_RS18520 PF03553 Na+/H+ antiporter family SVI_RS18525 PF00202 Aminotransferase class-III SVI_RS18535 PF08501 Shikimate dehydrogenase substrate binding domain SVI_RS18535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SVI_RS18535 PF01488 Shikimate / quinate 5-dehydrogenase SVI_RS18555 PF03060 Nitronate monooxygenase SVI_RS18580 PF03060 Nitronate monooxygenase SVI_RS18585 PF00884 Sulfatase SVI_RS18585 PF16347 Domain of unknown function (DUF4976) SVI_RS18600 PF00893 Small Multidrug Resistance protein SVI_RS18605 PF00893 Small Multidrug Resistance protein SVI_RS18610 PF04828 Glutathione-dependent formaldehyde-activating enzyme SVI_RS18625 PF00465 Iron-containing alcohol dehydrogenase SVI_RS18630 PF00440 Bacterial regulatory proteins, tetR family SVI_RS18630 PF16925 Tetracyclin repressor-like, C-terminal domain SVI_RS18635 PF01078 Magnesium chelatase, subunit ChlI SVI_RS18635 PF13335 Magnesium chelatase, subunit ChlI C-terminal SVI_RS18640 PF01553 Acyltransferase SVI_RS18645 PF01553 Acyltransferase SVI_RS18660 PF01063 Amino-transferase class IV SVI_RS18675 PF06005 Cell division protein ZapB SVI_RS18685 PF01323 DSBA-like thioredoxin domain SVI_RS18690 PF01636 Phosphotransferase enzyme family SVI_RS18710 PF11756 Nitrous oxide-stimulated promoter SVI_RS18720 PF00326 Prolyl oligopeptidase family SVI_RS18745 PF11842 Domain of unknown function (DUF3362) SVI_RS18745 PF08497 Radical SAM N-terminal SVI_RS18745 PF04055 Radical SAM superfamily SVI_RS18765 PF00483 Nucleotidyl transferase SVI_RS18765 PF01050 Mannose-6-phosphate isomerase SVI_RS18770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SVI_RS18770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SVI_RS18770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SVI_RS18770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SVI_RS18775 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SVI_RS18790 PF17131 Outer membrane lipoprotein-sorting protein SVI_RS18805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SVI_RS18810 PF04348 LppC putative lipoprotein SVI_RS18815 PF02021 Uncharacterised protein family UPF0102 SVI_RS18820 PF13580 SIS domain SVI_RS18825 PF04972 BON domain SVI_RS18830 PF00892 EamA-like transporter family SVI_RS18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SVI_RS18835 PF03466 LysR substrate binding domain SVI_RS18845 PF00579 tRNA synthetases class I (W and Y) SVI_RS18850 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS18855 PF00834 Ribulose-phosphate 3 epimerase family SVI_RS18870 PF02086 D12 class N6 adenine-specific DNA methyltransferase SVI_RS18880 PF01761 3-dehydroquinate synthase SVI_RS18885 PF01202 Shikimate kinase SVI_RS18890 PF00263 Bacterial type II and III secretion system protein SVI_RS18890 PF11741 AMIN domain SVI_RS18890 PF03958 Bacterial type II/III secretion system short domain SVI_RS18890 PF07660 Secretin and TonB N terminus short domain SVI_RS18900 PF04350 Pilus assembly protein, PilO SVI_RS18910 PF11104 Type IV pilus assembly protein PilM; SVI_RS18915 PF00905 Penicillin binding protein transpeptidase domain SVI_RS18915 PF00912 Transglycosylase SVI_RS18915 PF17092 Penicillin-binding protein OB-like domain SVI_RS18920 PF00206 Lyase SVI_RS18920 PF14698 Argininosuccinate lyase C-terminal SVI_RS18925 PF00764 Arginosuccinate synthase SVI_RS18930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SVI_RS18930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SVI_RS18935 PF00696 Amino acid kinase family SVI_RS18940 PF02774 Semialdehyde dehydrogenase, dimerisation domain SVI_RS18940 PF01118 Semialdehyde dehydrogenase, NAD binding domain SVI_RS18945 PF07687 Peptidase dimerisation domain SVI_RS18945 PF01546 Peptidase family M20/M25/M40 SVI_RS18950 PF00311 Phosphoenolpyruvate carboxylase SVI_RS18960 PF00994 Probable molybdopterin binding domain SVI_RS18960 PF02464 Competence-damaged protein SVI_RS19020 PF07516 SecA Wing and Scaffold domain SVI_RS19020 PF01043 SecA preprotein cross-linking domain SVI_RS19020 PF02810 SEC-C motif SVI_RS19020 PF07517 SecA DEAD-like domain SVI_RS19025 PF01551 Peptidase family M23 SVI_RS19035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SVI_RS19040 PF00091 Tubulin/FtsZ family, GTPase domain SVI_RS19040 PF12327 FtsZ family, C-terminal domain SVI_RS19045 PF02491 SHS2 domain inserted in FTSA SVI_RS19050 PF03799 Cell division protein FtsQ SVI_RS19050 PF08478 POTRA domain, FtsQ-type SVI_RS19055 PF02875 Mur ligase family, glutamate ligase domain SVI_RS19055 PF01225 Mur ligase family, catalytic domain SVI_RS19055 PF08245 Mur ligase middle domain SVI_RS19060 PF03033 Glycosyltransferase family 28 N-terminal domain SVI_RS19060 PF04101 Glycosyltransferase family 28 C-terminal domain SVI_RS19065 PF01098 Cell cycle protein SVI_RS19070 PF02875 Mur ligase family, glutamate ligase domain SVI_RS19070 PF08245 Mur ligase middle domain SVI_RS19075 PF00953 Glycosyl transferase family 4 SVI_RS19075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SVI_RS19080 PF08245 Mur ligase middle domain SVI_RS19080 PF02875 Mur ligase family, glutamate ligase domain SVI_RS19080 PF01225 Mur ligase family, catalytic domain SVI_RS19085 PF01225 Mur ligase family, catalytic domain SVI_RS19085 PF08245 Mur ligase middle domain SVI_RS19085 PF02875 Mur ligase family, glutamate ligase domain SVI_RS19090 PF03717 Penicillin-binding Protein dimerisation domain SVI_RS19090 PF00905 Penicillin binding protein transpeptidase domain SVI_RS19095 PF04999 Cell division protein FtsL SVI_RS19100 PF01795 MraW methylase family SVI_RS19105 PF02381 MraZ protein, putative antitoxin-like SVI_RS19115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SVI_RS19115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SVI_RS19125 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SVI_RS19130 PF00694 Aconitase C-terminal domain SVI_RS19135 PF00330 Aconitase family (aconitate hydratase) SVI_RS19140 PF00180 Isocitrate/isopropylmalate dehydrogenase SVI_RS19145 PF00682 HMGL-like SVI_RS19145 PF08502 LeuA allosteric (dimerisation) domain SVI_RS19150 PF00270 DEAD/DEAH box helicase SVI_RS19150 PF00570 HRDC domain SVI_RS19150 PF16124 RecQ zinc-binding SVI_RS19150 PF09382 RQC domain SVI_RS19150 PF00271 Helicase conserved C-terminal domain SVI_RS19155 PF03061 Thioesterase superfamily SVI_RS19160 PF00892 EamA-like transporter family SVI_RS19165 PF00696 Amino acid kinase family SVI_RS19165 PF00583 Acetyltransferase (GNAT) family SVI_RS19170 PF00471 Ribosomal protein L33 SVI_RS19175 PF00830 Ribosomal L28 family SVI_RS19180 PF04002 RadC-like JAB domain SVI_RS19185 PF04127 DNA / pantothenate metabolism flavoprotein SVI_RS19185 PF02441 Flavoprotein SVI_RS19190 PF00692 dUTPase SVI_RS19195 PF00440 Bacterial regulatory proteins, tetR family SVI_RS19205 PF01227 GTP cyclohydrolase I SVI_RS19210 PF00156 Phosphoribosyl transferase domain SVI_RS19215 PF03725 3' exoribonuclease family, domain 2 SVI_RS19215 PF01138 3' exoribonuclease family, domain 1 SVI_RS19220 PF03755 YicC-like family, N-terminal region SVI_RS19220 PF08340 Domain of unknown function (DUF1732) SVI_RS19230 PF07690 Major Facilitator Superfamily SVI_RS19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS19240 PF02743 Cache domain SVI_RS19240 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS19245 PF00072 Response regulator receiver domain SVI_RS19245 PF14532 Sigma-54 interaction domain SVI_RS19245 PF02954 Bacterial regulatory protein, Fis family SVI_RS19250 PF01636 Phosphotransferase enzyme family SVI_RS19260 PF00625 Guanylate kinase SVI_RS19265 PF01192 RNA polymerase Rpb6 SVI_RS19270 PF02824 TGS domain SVI_RS19270 PF13291 ACT domain SVI_RS19270 PF04607 Region found in RelA / SpoT proteins SVI_RS19275 PF01042 Endoribonuclease L-PSP SVI_RS19280 PF12105 SpoU, rRNA methylase, C-terminal SVI_RS19280 PF00588 SpoU rRNA Methylase family SVI_RS19285 PF01872 RibD C-terminal domain SVI_RS19285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SVI_RS19300 PF00501 AMP-binding enzyme SVI_RS19305 PF01699 Sodium/calcium exchanger protein SVI_RS19310 PF17191 RecG wedge domain SVI_RS19310 PF00271 Helicase conserved C-terminal domain SVI_RS19310 PF00270 DEAD/DEAH box helicase SVI_RS19325 PF01553 Acyltransferase SVI_RS19330 PF00550 Phosphopantetheine attachment site SVI_RS19335 PF00550 Phosphopantetheine attachment site SVI_RS19345 PF13193 AMP-binding enzyme C-terminal domain SVI_RS19345 PF00501 AMP-binding enzyme SVI_RS19345 PF01553 Acyltransferase SVI_RS19350 PF07977 FabA-like domain SVI_RS19360 PF00221 Aromatic amino acid lyase SVI_RS19380 PF04820 Tryptophan halogenase SVI_RS19390 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS19390 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS19395 PF07977 FabA-like domain SVI_RS19405 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS19405 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS19415 PF02580 D-Tyr-tRNA(Tyr) deacylase SVI_RS19425 PF00561 alpha/beta hydrolase fold SVI_RS19430 PF03631 Virulence factor BrkB SVI_RS19455 PF03144 Elongation factor Tu domain 2 SVI_RS19455 PF00009 Elongation factor Tu GTP binding domain SVI_RS19455 PF00679 Elongation factor G C-terminus SVI_RS19460 PF00120 Glutamine synthetase, catalytic domain SVI_RS19460 PF03951 Glutamine synthetase, beta-Grasp domain SVI_RS19465 PF00375 Sodium:dicarboxylate symporter family SVI_RS19475 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS19475 PF00989 PAS fold SVI_RS19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS19480 PF00072 Response regulator receiver domain SVI_RS19480 PF02954 Bacterial regulatory protein, Fis family SVI_RS19480 PF00158 Sigma-54 interaction domain SVI_RS19505 PF03918 Cytochrome C biogenesis protein SVI_RS19510 PF08534 Redoxin SVI_RS19515 PF01578 Cytochrome C assembly protein SVI_RS19515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SVI_RS19520 PF03918 Cytochrome C biogenesis protein SVI_RS19525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SVI_RS19530 PF00005 ABC transporter SVI_RS19535 PF03379 CcmB protein SVI_RS19540 PF01578 Cytochrome C assembly protein SVI_RS19545 PF04995 Heme exporter protein D (CcmD) SVI_RS19550 PF03100 CcmE SVI_RS19560 PF01196 Ribosomal protein L17 SVI_RS19565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SVI_RS19565 PF01000 RNA polymerase Rpb3/RpoA insert domain SVI_RS19565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SVI_RS19570 PF01479 S4 domain SVI_RS19570 PF00163 Ribosomal protein S4/S9 N-terminal domain SVI_RS19575 PF00411 Ribosomal protein S11 SVI_RS19580 PF00416 Ribosomal protein S13/S18 SVI_RS19585 PF00344 SecY translocase SVI_RS19590 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SVI_RS19595 PF00327 Ribosomal protein L30p/L7e SVI_RS19600 PF00333 Ribosomal protein S5, N-terminal domain SVI_RS19600 PF03719 Ribosomal protein S5, C-terminal domain SVI_RS19605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SVI_RS19610 PF00347 Ribosomal protein L6 SVI_RS19615 PF00410 Ribosomal protein S8 SVI_RS19620 PF00253 Ribosomal protein S14p/S29e SVI_RS19625 PF00673 ribosomal L5P family C-terminus SVI_RS19625 PF00281 Ribosomal protein L5 SVI_RS19630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SVI_RS19635 PF00238 Ribosomal protein L14p/L23e SVI_RS19640 PF00366 Ribosomal protein S17 SVI_RS19645 PF00831 Ribosomal L29 protein SVI_RS19650 PF00252 Ribosomal protein L16p/L10e SVI_RS19655 PF07650 KH domain SVI_RS19655 PF00189 Ribosomal protein S3, C-terminal domain SVI_RS19660 PF00237 Ribosomal protein L22p/L17e SVI_RS19665 PF00203 Ribosomal protein S19 SVI_RS19670 PF03947 Ribosomal Proteins L2, C-terminal domain SVI_RS19670 PF00181 Ribosomal Proteins L2, RNA binding domain SVI_RS19675 PF00276 Ribosomal protein L23 SVI_RS19680 PF00573 Ribosomal protein L4/L1 family SVI_RS19685 PF00297 Ribosomal protein L3 SVI_RS19690 PF00338 Ribosomal protein S10p/S20e SVI_RS19695 PF03143 Elongation factor Tu C-terminal domain SVI_RS19695 PF03144 Elongation factor Tu domain 2 SVI_RS19695 PF00009 Elongation factor Tu GTP binding domain SVI_RS19700 PF00679 Elongation factor G C-terminus SVI_RS19700 PF03144 Elongation factor Tu domain 2 SVI_RS19700 PF00009 Elongation factor Tu GTP binding domain SVI_RS19700 PF03764 Elongation factor G, domain IV SVI_RS19700 PF14492 Elongation Factor G, domain II SVI_RS19705 PF00177 Ribosomal protein S7p/S5e SVI_RS19710 PF00164 Ribosomal protein S12/S23 SVI_RS19715 PF05000 RNA polymerase Rpb1, domain 4 SVI_RS19715 PF04998 RNA polymerase Rpb1, domain 5 SVI_RS19715 PF04997 RNA polymerase Rpb1, domain 1 SVI_RS19715 PF00623 RNA polymerase Rpb1, domain 2 SVI_RS19715 PF04983 RNA polymerase Rpb1, domain 3 SVI_RS19720 PF04561 RNA polymerase Rpb2, domain 2 SVI_RS19720 PF04560 RNA polymerase Rpb2, domain 7 SVI_RS19720 PF00562 RNA polymerase Rpb2, domain 6 SVI_RS19720 PF04563 RNA polymerase beta subunit SVI_RS19720 PF10385 RNA polymerase beta subunit external 1 domain SVI_RS19720 PF04565 RNA polymerase Rpb2, domain 3 SVI_RS19725 PF16320 Ribosomal protein L7/L12 dimerisation domain SVI_RS19725 PF00542 Ribosomal protein L7/L12 C-terminal domain SVI_RS19730 PF00466 Ribosomal protein L10 SVI_RS19735 PF00687 Ribosomal protein L1p/L10e family SVI_RS19740 PF00298 Ribosomal protein L11, RNA binding domain SVI_RS19740 PF03946 Ribosomal protein L11, N-terminal domain SVI_RS19745 PF02357 Transcription termination factor nusG SVI_RS19745 PF00467 KOW motif SVI_RS19750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SVI_RS19755 PF03143 Elongation factor Tu C-terminal domain SVI_RS19755 PF03144 Elongation factor Tu domain 2 SVI_RS19755 PF00009 Elongation factor Tu GTP binding domain SVI_RS19775 PF00485 Phosphoribulokinase / Uridine kinase family SVI_RS19780 PF02237 Biotin protein ligase C terminal domain SVI_RS19780 PF08279 HTH domain SVI_RS19780 PF03099 Biotin/lipoate A/B protein ligase family SVI_RS19785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SVI_RS19785 PF01565 FAD binding domain SVI_RS19825 PF01177 Asp/Glu/Hydantoin racemase SVI_RS19830 PF05958 tRNA (Uracil-5-)-methyltransferase SVI_RS19835 PF00440 Bacterial regulatory proteins, tetR family SVI_RS19845 PF02769 AIR synthase related protein, C-terminal domain SVI_RS19845 PF00586 AIR synthase related protein, N-terminal domain SVI_RS19855 PF07690 Major Facilitator Superfamily SVI_RS19860 PF00459 Inositol monophosphatase family SVI_RS19865 PF00293 NUDIX domain SVI_RS19870 PF13419 Haloacid dehalogenase-like hydrolase SVI_RS19885 PF05134 Type II secretion system (T2SS), protein L SVI_RS19885 PF12693 GspL periplasmic domain SVI_RS19890 PF03934 Type II secretion system (T2SS), protein K SVI_RS19895 PF07963 Prokaryotic N-terminal methylation motif SVI_RS19895 PF11612 Type II secretion system (T2SS), protein J SVI_RS19900 PF02501 Type II secretion system (T2SS), protein I SVI_RS19900 PF07963 Prokaryotic N-terminal methylation motif SVI_RS19905 PF12019 Type II transport protein GspH SVI_RS19905 PF07963 Prokaryotic N-terminal methylation motif SVI_RS19910 PF07963 Prokaryotic N-terminal methylation motif SVI_RS19910 PF08334 Type II secretion system (T2SS), protein G SVI_RS19915 PF00482 Type II secretion system (T2SS), protein F SVI_RS19920 PF00437 Type II/IV secretion system protein SVI_RS19925 PF00263 Bacterial type II and III secretion system protein SVI_RS19925 PF03958 Bacterial type II/III secretion system short domain SVI_RS19930 PF11356 Type II secretion system protein C SVI_RS19935 PF01479 S4 domain SVI_RS19940 PF01430 Hsp33 protein SVI_RS19960 PF00246 Zinc carboxypeptidase SVI_RS19970 PF00593 TonB dependent receptor SVI_RS19970 PF07715 TonB-dependent Receptor Plug Domain SVI_RS19985 PF01569 PAP2 superfamily SVI_RS19990 PF01541 GIY-YIG catalytic domain SVI_RS19995 PF00326 Prolyl oligopeptidase family SVI_RS19995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SVI_RS20010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SVI_RS20015 PF00210 Ferritin-like domain SVI_RS20020 PF00873 AcrB/AcrD/AcrF family SVI_RS20030 PF03454 MoeA C-terminal region (domain IV) SVI_RS20030 PF03453 MoeA N-terminal region (domain I and II) SVI_RS20030 PF00994 Probable molybdopterin binding domain SVI_RS20035 PF00899 ThiF family SVI_RS20065 PF05114 Protein of unknown function (DUF692) SVI_RS20075 PF03616 Sodium/glutamate symporter SVI_RS20085 PF00849 RNA pseudouridylate synthase SVI_RS20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS20090 PF00512 His Kinase A (phospho-acceptor) domain SVI_RS20090 PF00672 HAMP domain SVI_RS20095 PF00486 Transcriptional regulatory protein, C terminal SVI_RS20095 PF00072 Response regulator receiver domain SVI_RS20105 PF17850 CysA C-terminal regulatory domain SVI_RS20105 PF12857 TOBE-like domain SVI_RS20105 PF00005 ABC transporter SVI_RS20110 PF00528 Binding-protein-dependent transport system inner membrane component SVI_RS20120 PF02391 MoaE protein SVI_RS20125 PF02597 ThiS family SVI_RS20130 PF01967 MoaC family SVI_RS20135 PF06463 Molybdenum Cofactor Synthesis C SVI_RS20135 PF04055 Radical SAM superfamily SVI_RS20145 PF02743 Cache domain SVI_RS20145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS20145 PF00672 HAMP domain SVI_RS20155 PF03475 3-alpha domain SVI_RS20155 PF03473 MOSC domain SVI_RS20160 PF00294 pfkB family carbohydrate kinase SVI_RS20165 PF00583 Acetyltransferase (GNAT) family SVI_RS20170 PF13302 Acetyltransferase (GNAT) domain SVI_RS20185 PF05971 RNA methyltransferase SVI_RS20195 PF04345 Chorismate lyase SVI_RS20200 PF00801 PKD domain SVI_RS20200 PF05547 Immune inhibitor A peptidase M6 SVI_RS20210 PF01204 Trehalase SVI_RS20215 PF01914 MarC family integral membrane protein SVI_RS20240 PF01553 Acyltransferase SVI_RS20245 PF01810 LysE type translocator SVI_RS20250 PF00924 Mechanosensitive ion channel SVI_RS20265 PF00221 Aromatic amino acid lyase SVI_RS20270 PF01175 Urocanase Rossmann-like domain SVI_RS20270 PF17391 Urocanase N-terminal domain SVI_RS20270 PF17392 Urocanase C-terminal domain SVI_RS20275 PF07702 UTRA domain SVI_RS20275 PF00392 Bacterial regulatory proteins, gntR family SVI_RS20280 PF01979 Amidohydrolase family SVI_RS20295 PF07715 TonB-dependent Receptor Plug Domain SVI_RS20295 PF00593 TonB dependent receptor SVI_RS20325 PF00501 AMP-binding enzyme SVI_RS20335 PF00005 ABC transporter SVI_RS20340 PF00392 Bacterial regulatory proteins, gntR family SVI_RS20340 PF07702 UTRA domain SVI_RS20345 PF00561 alpha/beta hydrolase fold SVI_RS20350 PF00005 ABC transporter SVI_RS20355 PF12679 ABC-2 family transporter protein SVI_RS20365 PF01965 DJ-1/PfpI family SVI_RS20375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS20375 PF00672 HAMP domain SVI_RS20380 PF00994 Probable molybdopterin binding domain SVI_RS20385 PF00877 NlpC/P60 family SVI_RS20395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SVI_RS20395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SVI_RS20400 PF02556 Preprotein translocase subunit SecB SVI_RS20405 PF00581 Rhodanese-like domain SVI_RS20410 PF01676 Metalloenzyme superfamily SVI_RS20410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SVI_RS20415 PF01551 Peptidase family M23 SVI_RS20420 PF03572 Peptidase family S41 SVI_RS20420 PF13180 PDZ domain SVI_RS20425 PF04748 Divergent polysaccharide deacetylase SVI_RS20430 PF02082 Transcriptional regulator SVI_RS20455 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SVI_RS20455 PF12801 4Fe-4S binding domain SVI_RS20455 PF13746 4Fe-4S dicluster domain SVI_RS20465 PF00378 Enoyl-CoA hydratase/isomerase SVI_RS20475 PF13492 GAF domain SVI_RS20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SVI_RS20475 PF06580 Histidine kinase SVI_RS20475 PF07694 5TMR of 5TMR-LYT SVI_RS20480 PF04397 LytTr DNA-binding domain SVI_RS20480 PF00072 Response regulator receiver domain SVI_RS20485 PF07715 TonB-dependent Receptor Plug Domain SVI_RS20485 PF00593 TonB dependent receptor SVI_RS20490 PF04151 Bacterial pre-peptidase C-terminal domain SVI_RS20490 PF08453 Peptidase family M9 N-terminal SVI_RS20490 PF01752 Collagenase SVI_RS20495 PF00209 Sodium:neurotransmitter symporter family SVI_RS20505 PF01040 UbiA prenyltransferase family SVI_RS20510 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SVI_RS20515 PF00510 Cytochrome c oxidase subunit III SVI_RS20520 PF00115 Cytochrome C and Quinol oxidase polypeptide I SVI_RS20525 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SVI_RS20525 PF06481 COX Aromatic Rich Motif SVI_RS20535 PF01380 SIS domain SVI_RS20540 PF08220 DeoR-like helix-turn-helix domain SVI_RS20540 PF00455 DeoR C terminal sensor domain SVI_RS20545 PF07715 TonB-dependent Receptor Plug Domain SVI_RS20545 PF00593 TonB dependent receptor SVI_RS20550 PF12804 MobA-like NTP transferase domain SVI_RS20550 PF00132 Bacterial transferase hexapeptide (six repeats) SVI_RS20555 PF02635 DsrE/DsrF-like family SVI_RS20560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SVI_RS20560 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SVI_RS20565 PF02874 ATP synthase alpha/beta family, beta-barrel domain SVI_RS20565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SVI_RS20570 PF00231 ATP synthase SVI_RS20575 PF02874 ATP synthase alpha/beta family, beta-barrel domain SVI_RS20575 PF00306 ATP synthase alpha/beta chain, C terminal domain SVI_RS20575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SVI_RS20580 PF00213 ATP synthase delta (OSCP) subunit SVI_RS20585 PF00430 ATP synthase B/B' CF(0) SVI_RS20590 PF00137 ATP synthase subunit C SVI_RS20595 PF00119 ATP synthase A chain SVI_RS20600 PF03899 ATP synthase I chain SVI_RS20605 PF17762 HTH domain found in ParB protein SVI_RS20605 PF02195 ParB-like nuclease domain SVI_RS20610 PF13614 AAA domain SVI_RS20615 PF02527 rRNA small subunit methyltransferase G SVI_RS20620 PF01134 Glucose inhibited division protein A SVI_RS20620 PF13932 GidA associated domain SVI_RS20630 PF12792 CSS motif domain associated with EAL SVI_RS20630 PF00563 EAL domain SVI_RS20650 PF06594 Haemolysin-type calcium binding protein related domain SVI_RS20650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SVI_RS20655 PF01752 Collagenase SVI_RS20655 PF18496 Collagenase G catalytic helper subdomain SVI_RS20655 PF08453 Peptidase family M9 N-terminal SVI_RS20680 PF17151 Periplasmic sensor domain SVI_RS20680 PF00990 Diguanylate cyclase, GGDEF domain SVI_RS20685 PF01757 Acyltransferase family SVI_RS20690 PF02719 Polysaccharide biosynthesis protein SVI_RS20695 PF01943 Polysaccharide biosynthesis protein SVI_RS20695 PF14667 Polysaccharide biosynthesis C-terminal domain SVI_RS20710 PF06483 Chitinase C SVI_RS20710 PF00704 Glycosyl hydrolases family 18 SVI_RS20715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SVI_RS20715 PF00672 HAMP domain SVI_RS20750 PF00591 Glycosyl transferase family, a/b domain SVI_RS20750 PF02885 Glycosyl transferase family, helical bundle domain SVI_RS20755 PF13401 AAA domain SVI_RS20755 PF01471 Putative peptidoglycan binding domain SVI_RS20760 PF00486 Transcriptional regulatory protein, C terminal SVI_RS20770 PF13737 Transposase DDE domain SVI_RS20780 PF00072 Response regulator receiver domain SVI_RS20780 PF00486 Transcriptional regulatory protein, C terminal SVI_RS20815 PF03960 ArsC family SVI_RS20830 PF08659 KR domain SVI_RS20830 PF00550 Phosphopantetheine attachment site SVI_RS20830 PF14765 Polyketide synthase dehydratase SVI_RS20830 PF00109 Beta-ketoacyl synthase, N-terminal domain SVI_RS20830 PF16197 Ketoacyl-synthetase C-terminal extension SVI_RS20830 PF00668 Condensation domain SVI_RS20830 PF13193 AMP-binding enzyme C-terminal domain SVI_RS20830 PF02801 Beta-ketoacyl synthase, C-terminal domain SVI_RS20830 PF00501 AMP-binding enzyme SVI_RS20835 PF04116 Fatty acid hydroxylase superfamily SVI_RS20855 PF03692 Putative zinc- or iron-chelating domain