locus-tag	class	description
C1P60_RS00090	COG0726	polysaccharide deacetylase
C1P60_RS00095	COG0297	glycogen (starch) synthase activity
C1P60_RS00100	COG2990	Protein conserved in bacteria
C1P60_RS00440	COG3385	transposase activity
C1P60_RS00450	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS00570	COG3344	reverse transcriptase
C1P60_RS00600	COG4372	Transposase
C1P60_RS00610	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS00670	COG4372	Transposase
C1P60_RS00675	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS00750	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS00805	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS00825	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS00830	COG4372	Transposase
C1P60_RS00835	COG4372	Transposase
C1P60_RS00905	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS00910	COG4372	Transposase
C1P60_RS00915	COG3009	Protein conserved in bacteria
C1P60_RS00920	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C1P60_RS00920	COG3008	intermembrane lipid transfer
C1P60_RS00925	COG2995	paraquat-inducible protein a
C1P60_RS00930	COG0488	(ABC) transporter
C1P60_RS00940	COG3217	Mosc domain protein beta barrel domain protein
C1P60_RS00940	COG0633	Ferredoxin
C1P60_RS00955	COG3121	Chaperone
C1P60_RS00960	COG3539	Fimbrial protein
C1P60_RS00965	COG3539	Fimbrial protein
C1P60_RS00970	COG3539	Fimbrial protein
C1P60_RS00985	COG3539	Fimbrial protein
C1P60_RS00990	COG0431	NADPH-dependent FMN reductase
C1P60_RS00995	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C1P60_RS01015	COG0308	aminopeptidase N
C1P60_RS01035	COG1448	Aminotransferase
C1P60_RS01040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C1P60_RS01045	COG3108	Peptidase M15
C1P60_RS01065	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS01080	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS01105	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
C1P60_RS01115	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C1P60_RS01120	COG1434	Gram-negative-bacterium-type cell wall biogenesis
C1P60_RS01125	COG3173	Aminoglycoside phosphotransferase
C1P60_RS01140	COG3214	Protein conserved in bacteria
C1P60_RS01150	COG1132	(ABC) transporter
C1P60_RS01160	COG4372	Transposase
C1P60_RS01165	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS01185	COG0539	negative regulation of cytoplasmic translation
C1P60_RS01210	COG2323	membrane
C1P60_RS01215	COG1944	ATP diphosphatase activity
C1P60_RS01220	COG2116	formate transmembrane transporter activity
C1P60_RS01225	COG1882	Formate acetyltransferase
C1P60_RS01230	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P60_RS01260	COG3302	dmso reductase anchor subunit
C1P60_RS01265	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS01280	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C1P60_RS01290	COG1674	ftsk spoiiie
C1P60_RS01290	COG1178	ABC-type Fe3 transport system permease component
C1P60_RS01295	COG1522	sequence-specific DNA binding
C1P60_RS01300	COG0492	ferredoxin-NADP+ reductase activity
C1P60_RS01305	COG4988	ABC transporter
C1P60_RS01310	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
C1P60_RS01335	COG0542	response to heat
C1P60_RS01345	COG1278	Cold shock
C1P60_RS01355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P60_RS01360	COG2990	Protein conserved in bacteria
C1P60_RS01365	COG3593	DNA synthesis involved in DNA repair
C1P60_RS01380	COG2431	L-lysine efflux transmembrane transporter activity
C1P60_RS01390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P60_RS01395	COG0028	Belongs to the TPP enzyme family
C1P60_RS01400	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
C1P60_RS01405	COG0702	epimerase
C1P60_RS01410	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P60_RS01415	COG3023	N-Acetylmuramoyl-L-alanine amidase
C1P60_RS01430	COG1126	abc transporter atp-binding protein
C1P60_RS01435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS01440	COG4215	(ABC) transporter
C1P60_RS01445	COG4160	amino acid transport
C1P60_RS01450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS01465	COG1177	transmembrane transport
C1P60_RS01470	COG1176	ABC-type spermidine putrescine transport system, permease component I
C1P60_RS01475	COG3842	ATPase activity
C1P60_RS01480	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
C1P60_RS01495	COG0778	Nitroreductase
C1P60_RS01505	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P60_RS01580	COG3226	Transcriptional regulator
C1P60_RS01585	COG0738	Major facilitator superfamily
C1P60_RS01590	COG0561	phosphatase activity
C1P60_RS01605	COG0671	phosphoesterase, PA-phosphatase related
C1P60_RS01610	COG1349	DNA-binding transcription factor activity
C1P60_RS01615	COG1686	Belongs to the peptidase S11 family
C1P60_RS01620	COG0625	glutathione transferase activity
C1P60_RS01625	COG2133	pyrroloquinoline quinone binding
C1P60_RS01640	COG2199	diguanylate cyclase activity
C1P60_RS01645	COG2200	EAL domain
C1P60_RS01670	COG0747	negative chemotaxis
C1P60_RS01680	COG1446	asparaginase
C1P60_RS01685	COG0303	'Molybdopterin
C1P60_RS01690	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C1P60_RS01695	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1P60_RS01700	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P60_RS01705	COG1882	Formate acetyltransferase
C1P60_RS01710	COG0561	phosphatase activity
C1P60_RS01720	COG0488	(ABC) transporter
C1P60_RS01725	COG1376	ErfK ybiS ycfS ynhG family protein
C1P60_RS01730	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
C1P60_RS01735	COG1321	iron dependent repressor
C1P60_RS01745	COG2194	sulfuric ester hydrolase activity
C1P60_RS01750	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C1P60_RS01760	COG5006	permease, DMT superfamily
C1P60_RS01770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS01775	COG0765	amino acid transport
C1P60_RS01780	COG1126	abc transporter atp-binding protein
C1P60_RS01785	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS01790	COG0668	transmembrane transport
C1P60_RS01805	COG4774	siderophore transport
C1P60_RS01815	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C1P60_RS01830	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1P60_RS01845	COG0513	Belongs to the DEAD box helicase family
C1P60_RS01850	COG1309	transcriptional regulator
C1P60_RS01860	COG1131	(ABC) transporter
C1P60_RS01865	COG0842	Transport permease protein
C1P60_RS01870	COG0842	Transport permease protein
C1P60_RS01880	COG3568	Endonuclease Exonuclease Phosphatase
C1P60_RS01890	COG0392	lysyltransferase activity
C1P60_RS01895	COG0670	Belongs to the BI1 family
C1P60_RS01900	COG0670	Belongs to the BI1 family
C1P60_RS01905	COG0314	molybdopterin synthase activity
C1P60_RS01910	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
C1P60_RS01920	COG0521	Mo-molybdopterin cofactor biosynthetic process
C1P60_RS01930	COG0391	Required for morphogenesis under gluconeogenic growth conditions
C1P60_RS01940	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1P60_RS01945	COG2226	methyltransferase
C1P60_RS01960	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C1P60_RS01965	COG1881	PFAM PEBP family protein
C1P60_RS01970	COG4677	pectinesterase activity
C1P60_RS01975	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C1P60_RS02000	COG2828	Protein conserved in bacteria
C1P60_RS02005	COG0583	DNA-binding transcription factor activity
C1P60_RS02015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C1P60_RS02070	COG4372	Transposase
C1P60_RS02075	COG4372	Transposase
C1P60_RS02080	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS02105	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1P60_RS02125	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P60_RS02130	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P60_RS02135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P60_RS02145	COG4372	Transposase
C1P60_RS02150	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS02160	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS02170	COG0584	glycerophosphoryl diester phosphodiesterase
C1P60_RS02175	COG2271	Major facilitator Superfamily
C1P60_RS02180	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1P60_RS02190	COG0247	lactate metabolic process
C1P60_RS02195	COG5464	transposase or invertase
C1P60_RS02235	COG4372	Transposase
C1P60_RS02240	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS02250	COG0318	PFAM AMP-dependent synthetase and ligase
C1P60_RS02260	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
C1P60_RS02275	COG1169	isochorismate synthase
C1P60_RS02280	COG4575	ribosome binding
C1P60_RS02285	COG2153	protein acetylation
C1P60_RS02320	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P60_RS02325	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1P60_RS02335	COG0839	Belongs to the complex I subunit 6 family
C1P60_RS02350	COG1034	ATP synthesis coupled electron transport
C1P60_RS02355	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C1P60_RS02360	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
C1P60_RS02380	COG0583	DNA-binding transcription factor activity
C1P60_RS02385	COG0436	Aminotransferase
C1P60_RS02395	COG0490	domain, Protein
C1P60_RS02395	COG0471	metal ion transport
C1P60_RS02400	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P60_RS02415	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C1P60_RS02420	COG0857	belongs to the CobB CobQ family
C1P60_RS02420	COG0280	phosphate acetyltransferase
C1P60_RS02425	COG1288	antiporter activity
C1P60_RS02430	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
C1P60_RS02435	COG0622	Phosphoesterase
C1P60_RS02440	COG0625	glutathione transferase activity
C1P60_RS02450	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C1P60_RS02455	COG1090	epimerase
C1P60_RS02475	COG4598	ABC transporter
C1P60_RS02480	COG4160	amino acid transport
C1P60_RS02485	COG4215	(ABC) transporter
C1P60_RS02490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS02495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS02500	COG0163	prenyltransferase activity
C1P60_RS02505	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
C1P60_RS02510	COG1286	toxin biosynthetic process
C1P60_RS02515	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
C1P60_RS02520	COG0285	dihydrofolate synthase activity
C1P60_RS02530	COG0586	Pfam SNARE associated Golgi protein
C1P60_RS02540	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
C1P60_RS02555	COG2814	Major facilitator Superfamily
C1P60_RS02560	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1P60_RS02575	COG3101	peptidyl-lysine hydroxylation
C1P60_RS02580	COG0730	response to heat
C1P60_RS02595	COG2890	protein-(glutamine-N5) methyltransferase activity
C1P60_RS02620	COG4372	Transposase
C1P60_RS02625	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS02640	COG3539	Fimbrial protein
C1P60_RS02645	COG3539	Fimbrial protein
C1P60_RS02650	COG3121	Chaperone
C1P60_RS02655	COG3188	usher protein
C1P60_RS02660	COG3539	Fimbrial protein
C1P60_RS02665	COG3539	Fimbrial protein
C1P60_RS02670	COG2062	phosphohistidine phosphatase, SixA
C1P60_RS02685	COG3691	Protein conserved in bacteria
C1P60_RS02690	COG2067	long-chain fatty acid transport protein
C1P60_RS02695	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS02710	COG2853	Lipoprotein
C1P60_RS02715	COG2116	formate transmembrane transporter activity
C1P60_RS02740	COG0477	Major facilitator Superfamily
C1P60_RS02745	COG1566	PFAM secretion protein HlyD family protein
C1P60_RS02750	COG2197	response regulator
C1P60_RS02755	COG2205	protein histidine kinase activity
C1P60_RS02755	COG2198	Histidine kinase
C1P60_RS02755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS02755	COG0784	Response regulator, receiver
C1P60_RS02760	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1P60_RS02765	COG0679	Auxin Efflux Carrier
C1P60_RS02770	COG0028	Belongs to the TPP enzyme family
C1P60_RS02795	COG1560	Kdo2-lipid A biosynthetic process
C1P60_RS02805	COG0436	Aminotransferase
C1P60_RS02810	COG3275	phosphorelay sensor kinase activity
C1P60_RS02815	COG3279	Response regulator of the LytR AlgR family
C1P60_RS02820	COG2207	Transcriptional regulator
C1P60_RS02835	COG0006	proline dipeptidase activity
C1P60_RS02840	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS02845	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS02870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P60_RS02875	COG3385	transposase activity
C1P60_RS02915	COG3415	Transposase
C1P60_RS02920	COG3415	Transposase
C1P60_RS02955	COG0583	DNA-binding transcription factor activity
C1P60_RS02960	COG0385	Bile acid
C1P60_RS02965	COG3530	Putative quorum-sensing-regulated virulence factor
C1P60_RS02985	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1P60_RS02990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS02995	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P60_RS03000	COG2190	(PTS) system
C1P60_RS03005	COG3385	transposase activity
C1P60_RS03020	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1P60_RS03025	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C1P60_RS03030	COG4208	sulfate ABC transporter
C1P60_RS03035	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C1P60_RS03040	COG4150	thiosulfate binding
C1P60_RS03045	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS03070	COG2837	iron assimilation
C1P60_RS03090	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P60_RS03100	COG2207	Transcriptional regulator
C1P60_RS03105	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
C1P60_RS03110	COG4816	utilization protein
C1P60_RS03125	COG4303	Ethanolamine ammonia lyase large subunit
C1P60_RS03130	COG4819	ethanolamine utilization protein
C1P60_RS03135	COG3192	ethanolamine utilization protein
C1P60_RS03140	COG1454	alcohol dehydrogenase
C1P60_RS03145	COG4820	ethanolamine utilization protein (EutJ)
C1P60_RS03150	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS03155	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
C1P60_RS03160	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
C1P60_RS03165	COG0280	phosphate acetyltransferase
C1P60_RS03170	COG4812	Cobalamin adenosyltransferase
C1P60_RS03175	COG4766	ethanolamine catabolic process
C1P60_RS03180	COG4917	ethanolamine utilization protein
C1P60_RS03185	COG4810	utilization protein
C1P60_RS03190	COG0280	phosphate acetyltransferase
C1P60_RS03190	COG0281	malic enzyme
C1P60_RS03195	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1P60_RS03200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C1P60_RS03205	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS03215	COG5342	invasion associated locus B
C1P60_RS03230	COG3850	Histidine kinase
C1P60_RS03250	COG1393	Belongs to the ArsC family
C1P60_RS03265	COG0400	carboxylic ester hydrolase activity
C1P60_RS03275	COG2321	neutral zinc metallopeptidase
C1P60_RS03285	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
C1P60_RS03295	COG2716	regulation of RNA biosynthetic process
C1P60_RS03300	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C1P60_RS03305	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS03315	COG0650	Formate hydrogenlyase subunit 4
C1P60_RS03320	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1P60_RS03330	COG4237	Hydrogenase 4 membrane
C1P60_RS03335	COG0651	ATP synthesis coupled electron transport
C1P60_RS03340	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
C1P60_RS03340	COG3261	NADH dehydrogenase
C1P60_RS03345	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P60_RS03350	COG3260	NADH ubiquinone oxidoreductase 20
C1P60_RS03365	COG2116	formate transmembrane transporter activity
C1P60_RS03370	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS03375	COG2116	formate transmembrane transporter activity
C1P60_RS03380	COG0628	permease
C1P60_RS03385	COG4783	chaperone-mediated protein folding
C1P60_RS03390	COG1393	Belongs to the ArsC family
C1P60_RS03400	COG2233	PERMEase
C1P60_RS03415	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
C1P60_RS03420	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
C1P60_RS03425	COG0248	Ppx GppA phosphatase
C1P60_RS03455	COG0517	IMP dehydrogenase activity
C1P60_RS03455	COG0516	GMP reductase activity
C1P60_RS03465	COG1645	bacterial-type flagellum-dependent swarming motility
C1P60_RS03480	COG2976	Protein conserved in bacteria
C1P60_RS03510	COG4953	penicillin-binding protein 1C
C1P60_RS03515	COG2373	Large extracellular alpha-helical protein
C1P60_RS03520	COG2897	thiosulfate sulfurtransferase activity
C1P60_RS03535	COG2975	iron-sulfur cluster assembly
C1P60_RS03540	COG0633	Ferredoxin
C1P60_RS03560	COG0822	iron-sulfur transferase activity
C1P60_RS03580	COG0483	inositol monophosphate 1-phosphatase activity
C1P60_RS03585	COG1073	alpha beta
C1P60_RS03590	COG3711	transcriptional antiterminator
C1P60_RS03595	COG2814	Major facilitator Superfamily
C1P60_RS03600	COG0583	DNA-binding transcription factor activity
C1P60_RS03610	COG1940	carbohydrate kinase activity
C1P60_RS03620	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P60_RS03620	COG1017	nitric oxide dioxygenase activity
C1P60_RS03625	COG0347	Belongs to the P(II) protein family
C1P60_RS03630	COG2204	response regulator
C1P60_RS03635	COG3170	Tfp pilus assembly protein FimV
C1P60_RS03640	COG2205	protein histidine kinase activity
C1P60_RS03660	COG0560	Phosphoserine phosphatase
C1P60_RS03665	COG1737	Transcriptional regulator
C1P60_RS03670	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS03705	COG0681	Belongs to the peptidase S26 family
C1P60_RS03715	COG3086	response to oxidative stress
C1P60_RS03720	COG3026	antisigma factor binding
C1P60_RS03725	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
C1P60_RS03730	COG1595	DNA-templated transcription, initiation
C1P60_RS03740	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
C1P60_RS03765	COG0513	Belongs to the DEAD box helicase family
C1P60_RS03785	COG4372	Transposase
C1P60_RS03790	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS03805	COG5544	Lipoprotein
C1P60_RS03810	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C1P60_RS03815	COG0045	succinate-CoA ligase (ADP-forming) activity
C1P60_RS03815	COG1042	CoA-binding domain protein
C1P60_RS03815	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P60_RS03820	COG3148	PFAM DTW domain containing protein
C1P60_RS03825	COG3118	belongs to the thioredoxin family
C1P60_RS03830	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P60_RS03860	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS03870	COG4372	Transposase
C1P60_RS03875	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS03890	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS03895	COG4372	Transposase
C1P60_RS03925	COG0542	response to heat
C1P60_RS03935	COG0564	pseudouridine synthase activity
C1P60_RS03940	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P60_RS03960	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C1P60_RS03970	COG1605	Chorismate mutase
C1P60_RS03970	COG0077	Prephenate dehydratase
C1P60_RS03975	COG1605	Chorismate mutase
C1P60_RS03975	COG0287	Prephenate dehydrogenase
C1P60_RS03980	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C1P60_RS04035	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C1P60_RS04040	COG4137	Cytochrome C assembly protein
C1P60_RS04045	COG4536	flavin adenine dinucleotide binding
C1P60_RS04065	COG0497	DNA recombination
C1P60_RS04070	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P60_RS04080	COG2867	negative regulation of translational initiation
C1P60_RS04110	COG0814	amino acid
C1P60_RS04115	COG0183	Belongs to the thiolase family
C1P60_RS04130	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS04135	COG2814	Major facilitator Superfamily
C1P60_RS04140	COG1794	racemase activity, acting on amino acids and derivatives
C1P60_RS04145	COG0583	DNA-binding transcription factor activity
C1P60_RS04155	COG1609	Transcriptional regulator
C1P60_RS04160	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS04180	COG0667	Aldo Keto reductase
C1P60_RS04190	COG0861	Integral membrane protein TerC family
C1P60_RS04210	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
C1P60_RS04225	COG2165	general secretion pathway protein
C1P60_RS04230	COG4795	General secretion pathway protein
C1P60_RS04240	COG4967	type IV pilus modification protein PilV
C1P60_RS04245	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
C1P60_RS04250	COG1025	Belongs to the peptidase M16 family
C1P60_RS04255	COG1074	ATP-dependent DNA helicase activity
C1P60_RS04260	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C1P60_RS04265	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
C1P60_RS04265	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C1P60_RS04270	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P60_RS04280	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS04280	COG1263	PTS System
C1P60_RS04320	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
C1P60_RS04325	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C1P60_RS04330	COG2166	iron-sulfur cluster assembly
C1P60_RS04335	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C1P60_RS04345	COG0583	DNA-binding transcription factor activity
C1P60_RS04350	COG2363	Small membrane protein
C1P60_RS04400	COG1760	l-serine dehydratase
C1P60_RS04405	COG0814	amino acid
C1P60_RS04410	COG1611	Belongs to the LOG family
C1P60_RS04425	COG3098	single-species biofilm formation
C1P60_RS04430	COG0564	pseudouridine synthase activity
C1P60_RS04435	COG0716	FMN binding
C1P60_RS04440	COG2271	Major facilitator Superfamily
C1P60_RS04450	COG4948	Mandelate Racemase Muconate Lactonizing
C1P60_RS04455	COG3850	Histidine kinase
C1P60_RS04455	COG3437	response regulator, receiver
C1P60_RS04455	COG2205	protein histidine kinase activity
C1P60_RS04455	COG4999	Histidine kinase
C1P60_RS04465	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1P60_RS04470	COG2336	PFAM SpoVT AbrB
C1P60_RS04475	COG2337	Toxic component of a toxin-antitoxin (TA) module
C1P60_RS04480	COG3956	TIGRFAM MazG family protein
C1P60_RS04505	COG0602	queuosine metabolic process
C1P60_RS04515	COG0477	Major facilitator Superfamily
C1P60_RS04520	COG2086	electron transfer activity
C1P60_RS04525	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
C1P60_RS04530	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
C1P60_RS04535	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C1P60_RS04540	COG0644	oxidoreductase
C1P60_RS04545	COG0720	synthase
C1P60_RS04600	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P60_RS04605	COG2234	aminopeptidase activity
C1P60_RS04660	COG1388	LysM domain
C1P60_RS04660	COG4942	peptidase
C1P60_RS04670	COG2610	gluconate transmembrane transporter activity
C1P60_RS04675	COG3622	Belongs to the hyi family
C1P60_RS04680	COG0235	Class ii aldolase
C1P60_RS04690	COG2084	Dehydrogenase
C1P60_RS04695	COG1349	DNA-binding transcription factor activity
C1P60_RS04725	COG0309	Hydrogenase expression formation protein (HypE)
C1P60_RS04730	COG0409	Hydrogenase expression formation protein
C1P60_RS04735	COG0298	carbon dioxide binding
C1P60_RS04740	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
C1P60_RS04745	COG0375	protein maturation
C1P60_RS04760	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS04770	COG0650	Formate hydrogenlyase subunit 4
C1P60_RS04775	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
C1P60_RS04775	COG3261	NADH dehydrogenase
C1P60_RS04780	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P60_RS04795	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P60_RS04800	COG2723	6-phospho-beta-galactosidase activity
C1P60_RS04805	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS04805	COG1263	PTS System
C1P60_RS04810	COG1609	Transcriptional regulator
C1P60_RS04815	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS04820	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
C1P60_RS04845	COG1349	DNA-binding transcription factor activity
C1P60_RS04850	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS04855	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS04865	COG3732	PTS system glucitol sorbitol-specific
C1P60_RS04870	COG3730	PTS system glucitol sorbitol-specific
C1P60_RS04875	COG2951	lytic endotransglycosylase activity
C1P60_RS04880	COG1546	Belongs to the CinA family
C1P60_RS04900	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
C1P60_RS04925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P60_RS04930	COG1238	metal cluster binding
C1P60_RS04945	COG2814	Major facilitator Superfamily
C1P60_RS04950	COG1566	PFAM secretion protein HlyD family protein
C1P60_RS04955	COG1846	Transcriptional regulator
C1P60_RS04965	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C1P60_RS04970	COG2814	Major facilitator Superfamily
C1P60_RS04990	COG2113	Glycine betaine
C1P60_RS04995	COG4176	ABC-type proline glycine betaine transport system permease component
C1P60_RS05000	COG4175	Glycine betaine
C1P60_RS05005	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P60_RS05010	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P60_RS05020	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P60_RS05025	COG4575	ribosome binding
C1P60_RS05045	COG2916	Histone family protein nucleoid-structuring protein H-NS
C1P60_RS05050	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P60_RS05055	COG0640	Transcriptional regulator
C1P60_RS05060	COG0401	homolog of Blt101
C1P60_RS05065	COG1652	LysM domain
C1P60_RS05070	COG1802	Transcriptional regulator
C1P60_RS05075	COG1113	amino acid transport
C1P60_RS05090	COG0579	oxidoreductase
C1P60_RS05100	COG0366	Alpha amylase catalytic
C1P60_RS05135	COG2271	Major facilitator Superfamily
C1P60_RS05150	COG2084	Dehydrogenase
C1P60_RS05155	COG1929	Belongs to the glycerate kinase type-1 family
C1P60_RS05200	COG0583	DNA-binding transcription factor activity
C1P60_RS05205	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1P60_RS05215	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C1P60_RS05220	COG1882	Formate acetyltransferase
C1P60_RS05225	COG0251	oxidation-reduction process
C1P60_RS05230	COG1760	l-serine dehydratase
C1P60_RS05240	COG0814	amino acid
C1P60_RS05255	COG1741	Belongs to the pirin family
C1P60_RS05275	COG3152	Membrane
C1P60_RS05285	COG4372	Transposase
C1P60_RS05290	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS05300	COG3152	Membrane
C1P60_RS05305	COG0435	Glutathione S-transferase
C1P60_RS05310	COG2259	Doxx family
C1P60_RS05320	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
C1P60_RS05325	COG4575	ribosome binding
C1P60_RS05330	COG1422	Protein of unknown function (DUF1090)
C1P60_RS05340	COG0586	Pfam SNARE associated Golgi protein
C1P60_RS05345	COG2186	Transcriptional regulator
C1P60_RS05375	COG0583	DNA-binding transcription factor activity
C1P60_RS05380	COG0312	modulator of DNA gyrase
C1P60_RS05385	COG3164	Protein of unknown function
C1P60_RS05390	COG1530	ribonuclease E activity
C1P60_RS05400	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
C1P60_RS05405	COG1792	Involved in formation and maintenance of cell shape
C1P60_RS05410	COG1077	Cell shape determining protein MreB Mrl
C1P60_RS05420	COG2200	EAL domain
C1P60_RS05420	COG2199	diguanylate cyclase activity
C1P60_RS05425	COG0604	alcohol dehydrogenase
C1P60_RS05430	COG0511	ligase activity, forming carbon-carbon bonds
C1P60_RS05435	COG0439	Biotin carboxylase
C1P60_RS05445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS05520	COG4974	Belongs to the 'phage' integrase family
C1P60_RS05530	COG4942	peptidase
C1P60_RS05565	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C1P60_RS05570	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1P60_RS05575	COG4974	Belongs to the 'phage' integrase family
C1P60_RS05580	COG0716	FMN binding
C1P60_RS05590	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
C1P60_RS05600	COG1272	protein, Hemolysin III
C1P60_RS05610	COG2723	6-phospho-beta-galactosidase activity
C1P60_RS05615	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS05640	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P60_RS05645	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P60_RS05650	COG0006	proline dipeptidase activity
C1P60_RS05670	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C1P60_RS05685	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C1P60_RS05715	COG1703	isobutyryl-CoA mutase activity
C1P60_RS05720	COG1024	Enoyl-CoA hydratase
C1P60_RS05740	COG0583	DNA-binding transcription factor activity
C1P60_RS05745	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS05750	COG2968	Membrane
C1P60_RS05760	COG0668	transmembrane transport
C1P60_RS05765	COG0191	fructose-bisphosphate aldolase activity
C1P60_RS05795	COG1122	ATPase activity
C1P60_RS05800	COG1122	ATPase activity
C1P60_RS05805	COG1072	(Pantothenic acid kinase))
C1P60_RS05810	COG3722	fumarate hydratase activity
C1P60_RS05815	COG1494	fructose-1,6-bisphosphatase
C1P60_RS05820	COG1063	alcohol dehydrogenase
C1P60_RS05830	COG1063	alcohol dehydrogenase
C1P60_RS05835	COG2213	PTS system mannitol-specific
C1P60_RS05840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS05845	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C1P60_RS05850	COG0501	Belongs to the peptidase M48B family
C1P60_RS05860	COG1166	arginine decarboxylase activity
C1P60_RS05885	COG2814	Major facilitator Superfamily
C1P60_RS05895	COG2356	endonuclease I
C1P60_RS05900	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C1P60_RS05905	COG0189	ligase activity
C1P60_RS05920	COG2805	Type II/IV secretion system protein
C1P60_RS05925	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
C1P60_RS05930	COG0762	integral membrane protein
C1P60_RS05945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C1P60_RS05955	COG0252	asparaginase activity
C1P60_RS05965	COG3171	Protein conserved in bacteria
C1P60_RS05975	COG1194	a g-specific adenine glycosylase
C1P60_RS05990	COG2211	Major facilitator Superfamily
C1P60_RS06005	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS06015	COG1811	Na channel or pump
C1P60_RS06025	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
C1P60_RS06055	COG2165	general secretion pathway protein
C1P60_RS06060	COG1459	type II secretion system
C1P60_RS06085	COG4372	Transposase
C1P60_RS06090	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS06105	COG4238	major outer membrane lipoprotein
C1P60_RS06115	COG0656	L-ascorbic acid biosynthetic process
C1P60_RS06125	COG4372	Transposase
C1P60_RS06130	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS06140	COG1979	alcohol dehydrogenase
C1P60_RS06145	COG2207	Transcriptional regulator
C1P60_RS06150	COG0586	Pfam SNARE associated Golgi protein
C1P60_RS06155	COG0626	cystathionine gamma-synthase activity
C1P60_RS06160	COG0811	peptide transport
C1P60_RS06165	COG0848	biopolymer transport protein
C1P60_RS06170	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS06180	COG0667	Aldo Keto reductase
C1P60_RS06205	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
C1P60_RS06210	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS06215	COG5557	Pfam Polysulphide reductase, NrfD
C1P60_RS06220	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
C1P60_RS06225	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P60_RS06230	COG1773	rubredoxin
C1P60_RS06240	COG0298	carbon dioxide binding
C1P60_RS06245	COG0625	glutathione transferase activity
C1P60_RS06250	COG0754	glutathionylspermidine amidase activity
C1P60_RS06265	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS06270	COG4372	Transposase
C1P60_RS06280	COG1032	radical SAM domain protein
C1P60_RS06290	COG2132	Multicopper oxidase
C1P60_RS06295	COG0204	Acyl-transferase
C1P60_RS06300	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1P60_RS06305	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C1P60_RS06310	COG3111	PFAM Bacterial OB fold (BOF) protein
C1P60_RS06315	COG0745	RESPONSE REGULATOR receiver
C1P60_RS06320	COG0642	Histidine kinase
C1P60_RS06325	COG2249	NAD(P)H dehydrogenase (quinone) activity
C1P60_RS06330	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
C1P60_RS06335	COG0187	DNA topoisomerase II activity
C1P60_RS06340	COG3150	esterase
C1P60_RS06345	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C1P60_RS06350	COG3151	Protein conserved in bacteria
C1P60_RS06355	COG0494	nUDIX hydrolase
C1P60_RS06360	COG1538	Outer membrane efflux protein
C1P60_RS06370	COG0754	glutathionylspermidine amidase activity
C1P60_RS06375	COG3384	dioxygenase
C1P60_RS06395	COG2960	long-chain fatty acid transporting porin activity
C1P60_RS06400	COG3539	Fimbrial protein
C1P60_RS06410	COG2268	Band 7 protein
C1P60_RS06435	COG3025	triphosphatase activity
C1P60_RS06455	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C1P60_RS06475	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P60_RS06485	COG0471	metal ion transport
C1P60_RS06495	COG0828	Belongs to the bacterial ribosomal protein bS21 family
C1P60_RS06500	COG0358	DNA primase activity
C1P60_RS06505	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1P60_RS06510	COG3385	transposase activity
C1P60_RS06525	COG2375	cellular response to nickel ion
C1P60_RS06530	COG1695	Transcriptional regulator
C1P60_RS06535	COG0840	transmembrane signaling receptor activity
C1P60_RS06565	COG3408	Glycogen debranching enzyme
C1P60_RS06565	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
C1P60_RS06575	COG0446	pyridine nucleotide-disulphide oxidoreductase
C1P60_RS06575	COG1902	pentaerythritol trinitrate reductase activity
C1P60_RS06580	COG5499	transcription regulator containing HTH domain
C1P60_RS06585	COG4680	protein conserved in bacteria
C1P60_RS06595	COG1451	nucleotide metabolic process
C1P60_RS06600	COG2949	membrane
C1P60_RS06605	COG0673	inositol 2-dehydrogenase activity
C1P60_RS06610	COG0861	Integral membrane protein TerC family
C1P60_RS06625	COG2721	sulfolactate sulfo-lyase activity
C1P60_RS06635	COG2271	Major facilitator Superfamily
C1P60_RS06665	COG2732	(Barnase) inhibitor
C1P60_RS06685	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P60_RS06690	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P60_RS06695	COG3105	Protein conserved in bacteria
C1P60_RS06700	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
C1P60_RS06715	COG0625	glutathione transferase activity
C1P60_RS06720	COG2969	positive regulation of protein catabolic process
C1P60_RS06755	COG2731	YhcH YjgK YiaL family protein
C1P60_RS06765	COG4804	nuclease activity
C1P60_RS06770	COG0493	'glutamate synthase
C1P60_RS06775	COG0067	glutamate synthase
C1P60_RS06775	COG0070	glutamate synthase
C1P60_RS06775	COG0069	glutamate synthase activity
C1P60_RS06780	COG1242	4 iron, 4 sulfur cluster binding
C1P60_RS06785	COG0784	Response regulator, receiver
C1P60_RS06785	COG2198	Histidine kinase
C1P60_RS06785	COG5002	protein histidine kinase activity
C1P60_RS06790	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
C1P60_RS06800	COG0515	serine threonine protein kinase
C1P60_RS06805	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS06820	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C1P60_RS06825	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
C1P60_RS06830	COG1137	ATPase activity
C1P60_RS06835	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
C1P60_RS06840	COG3117	lipopolysaccharide transmembrane transporter activity
C1P60_RS06845	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
C1P60_RS06850	COG0517	IMP dehydrogenase activity
C1P60_RS06850	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
C1P60_RS06855	COG0530	calcium, potassium:sodium antiporter activity
C1P60_RS06860	COG1127	ABC transporter
C1P60_RS06865	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C1P60_RS06870	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C1P60_RS06875	COG2854	intermembrane phospholipid transfer
C1P60_RS06880	COG3113	response to antibiotic
C1P60_RS06885	COG5007	Belongs to the BolA IbaG family
C1P60_RS06895	COG3423	Transcriptional regulator
C1P60_RS06900	COG0142	geranyltranstransferase activity
C1P60_RS06915	COG0697	spore germination
C1P60_RS06925	COG2027	D-alanyl-D-alanine carboxypeptidase
C1P60_RS06930	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1P60_RS06935	COG1534	Rna-binding protein
C1P60_RS06945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C1P60_RS06950	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C1P60_RS06960	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C1P60_RS06970	COG2194	sulfuric ester hydrolase activity
C1P60_RS07010	COG0195	Participates in both transcription termination and antitermination
C1P60_RS07050	COG0513	Belongs to the DEAD box helicase family
C1P60_RS07055	COG0814	amino acid
C1P60_RS07060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1P60_RS07065	COG0826	peptidase U32
C1P60_RS07070	COG0826	peptidase U32
C1P60_RS07075	COG3154	lipid carrier protein
C1P60_RS07080	COG3153	acetyltransferase
C1P60_RS07095	COG0693	protein deglycase activity
C1P60_RS07100	COG0702	epimerase
C1P60_RS07105	COG0701	Predicted permease
C1P60_RS07110	COG2823	Periplasmic or secreted lipoprotein
C1P60_RS07130	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
C1P60_RS07185	COG1349	DNA-binding transcription factor activity
C1P60_RS07190	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS07195	COG3924	membrane
C1P60_RS07200	COG4145	pantothenate transmembrane transporter activity
C1P60_RS07210	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C1P60_RS07220	COG2189	Belongs to the N(4) N(6)-methyltransferase family
C1P60_RS07230	COG1309	transcriptional regulator
C1P60_RS07235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P60_RS07250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS07290	COG0765	amino acid transport
C1P60_RS07295	COG1126	abc transporter atp-binding protein
C1P60_RS07335	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C1P60_RS07355	COG0551	DNA topoisomerase type I activity
C1P60_RS07365	COG0758	DNA mediated transformation
C1P60_RS07385	COG0569	domain protein
C1P60_RS07395	COG3036	rescue of stalled ribosome
C1P60_RS07400	COG0789	Transcriptional regulator
C1P60_RS07440	COG0201	protein transport
C1P60_RS07530	COG0089	rRNA binding
C1P60_RS07565	COG4372	Transposase
C1P60_RS07570	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS07585	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS07645	COG2964	Protein conserved in bacteria
C1P60_RS07650	COG0545	Peptidyl-prolyl cis-trans isomerase
C1P60_RS07660	COG1047	Peptidyl-prolyl cis-trans
C1P60_RS07665	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
C1P60_RS07680	COG0488	(ABC) transporter
C1P60_RS07685	COG0429	hydrolase of the alpha beta-hydrolase fold
C1P60_RS07695	COG3954	Phosphoribulokinase
C1P60_RS07700	COG1765	OsmC-like protein
C1P60_RS07710	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P60_RS07715	COG1289	transmembrane transporter activity
C1P60_RS07725	COG0512	Glutamine amidotransferase of anthranilate synthase
C1P60_RS07730	COG2184	nucleotidyltransferase activity
C1P60_RS07740	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C1P60_RS07755	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C1P60_RS07760	COG2146	nitrite reductase [NAD(P)H] activity
C1P60_RS07765	COG2116	formate transmembrane transporter activity
C1P60_RS07785	COG0531	amino acid
C1P60_RS07795	COG1082	Xylose isomerase domain protein TIM barrel
C1P60_RS07800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS07805	COG2188	Transcriptional regulator
C1P60_RS07810	COG0626	cystathionine gamma-synthase activity
C1P60_RS07820	COG3385	transposase activity
C1P60_RS07835	COG1735	metal-dependent hydrolase with the TIM-barrel fold
C1P60_RS07840	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
C1P60_RS07845	COG3457	Alanine racemase
C1P60_RS07855	COG2188	Transcriptional regulator
C1P60_RS07860	COG0180	Tryptophanyl-tRNA synthetase
C1P60_RS07870	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C1P60_RS07875	COG0338	D12 class N6 adenine-specific DNA methyltransferase
C1P60_RS07880	COG3266	domain, Protein
C1P60_RS07895	COG4796	Type ii and iii secretion system protein
C1P60_RS07910	COG3166	PFAM Fimbrial assembly family protein
C1P60_RS07915	COG4972	Pilus assembly protein
C1P60_RS07920	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
C1P60_RS07925	COG0494	nUDIX hydrolase
C1P60_RS07935	COG1011	Hydrolase
C1P60_RS07940	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
C1P60_RS07950	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C1P60_RS07970	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1P60_RS07975	COG2183	response to ionizing radiation
C1P60_RS07985	COG1918	ferrous iron import across plasma membrane
C1P60_RS07990	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
C1P60_RS08000	COG5464	transposase or invertase
C1P60_RS08010	COG1040	competence protein
C1P60_RS08020	COG2610	gluconate transmembrane transporter activity
C1P60_RS08025	COG1640	4-alpha-glucanotransferase
C1P60_RS08030	COG0058	SHG alpha-glucan phosphorylase activity
C1P60_RS08045	COG1690	Belongs to the RtcB family
C1P60_RS08055	COG4650	regulator
C1P60_RS08060	COG1349	DNA-binding transcription factor activity
C1P60_RS08075	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1P60_RS08115	COG1393	Belongs to the ArsC family
C1P60_RS08120	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
C1P60_RS08125	COG0640	Transcriptional regulator
C1P60_RS08135	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C1P60_RS08140	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
C1P60_RS08145	COG0339	signal peptide processing
C1P60_RS08155	COG3104	oligopeptide transport
C1P60_RS08165	COG0589	response to stress
C1P60_RS08175	COG0306	phosphate transporter
C1P60_RS08180	COG2081	HI0933 family
C1P60_RS08200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P60_RS08205	COG1129	ABC transporter
C1P60_RS08205	COG0842	Transport permease protein
C1P60_RS08210	COG0842	Transport permease protein
C1P60_RS08235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P60_RS08240	COG0601	transmembrane transport
C1P60_RS08245	COG0747	negative chemotaxis
C1P60_RS08255	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS08260	COG2091	lysine biosynthetic process via aminoadipic acid
C1P60_RS08265	COG0628	permease
C1P60_RS08280	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
C1P60_RS08295	COG3714	YhhN family
C1P60_RS08305	COG3776	membrane
C1P60_RS08310	COG0742	ribosomal rna small subunit methyltransferase
C1P60_RS08315	COG0552	protein localization to endoplasmic reticulum
C1P60_RS08320	COG2884	Cell division ATP-binding protein ftsE
C1P60_RS08325	COG2177	Part of the ABC transporter FtsEX involved in
C1P60_RS08330	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1P60_RS08335	COG0683	leucine binding
C1P60_RS08340	COG0456	acetyltransferase
C1P60_RS08345	COG0683	leucine binding
C1P60_RS08350	COG0559	Belongs to the binding-protein-dependent transport system permease family
C1P60_RS08355	COG4177	L-phenylalanine transmembrane transporter activity
C1P60_RS08360	COG0411	ABC transporter
C1P60_RS08365	COG0410	ABC transporter
C1P60_RS08370	COG1653	transport
C1P60_RS08375	COG1175	transmembrane transport
C1P60_RS08390	COG0584	glycerophosphoryl diester phosphodiesterase
C1P60_RS08400	COG0405	Gamma-glutamyltransferase
C1P60_RS08435	COG3157	Type VI secretion system effector, Hcp
C1P60_RS08440	COG1247	-acetyltransferase
C1P60_RS08445	COG0673	inositol 2-dehydrogenase activity
C1P60_RS08450	COG1741	Belongs to the pirin family
C1P60_RS08455	COG1609	Transcriptional regulator
C1P60_RS08460	COG3265	gluconokinase activity
C1P60_RS08465	COG2610	gluconate transmembrane transporter activity
C1P60_RS08470	COG2095	MarC family integral membrane protein
C1P60_RS08475	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
C1P60_RS08500	COG0058	SHG alpha-glucan phosphorylase activity
C1P60_RS08515	COG4372	Transposase
C1P60_RS08520	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS08530	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS08535	COG4372	Transposase
C1P60_RS08560	COG3065	identical protein binding
C1P60_RS08565	COG2197	response regulator
C1P60_RS08570	COG1285	pathogenesis
C1P60_RS08585	COG3247	response to pH
C1P60_RS08590	COG2771	luxR family
C1P60_RS08600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P60_RS08605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P60_RS08610	COG2207	Transcriptional regulator
C1P60_RS08635	COG1858	cytochrome C peroxidase
C1P60_RS08660	COG3385	transposase activity
C1P60_RS08665	COG2197	response regulator
C1P60_RS08670	COG0583	DNA-binding transcription factor activity
C1P60_RS08675	COG1295	ribonuclease BN
C1P60_RS08680	COG0477	Major facilitator Superfamily
C1P60_RS08695	COG2982	Protein involved in outer membrane biogenesis
C1P60_RS08700	COG2200	EAL domain
C1P60_RS08710	COG0612	Peptidase, M16
C1P60_RS08720	COG2200	EAL domain
C1P60_RS08720	COG2199	diguanylate cyclase activity
C1P60_RS08735	COG1215	transferase activity, transferring glycosyl groups
C1P60_RS08740	COG1215	transferase activity, transferring glycosyl groups
C1P60_RS08765	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
C1P60_RS08780	COG1414	Transcriptional regulator
C1P60_RS08785	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS08790	COG3977	Valine--pyruvate aminotransferase
C1P60_RS08795	COG0366	Alpha amylase catalytic
C1P60_RS08800	COG2992	FlgJ-related protein
C1P60_RS08805	COG2207	Transcriptional regulator
C1P60_RS08805	COG1609	Transcriptional regulator
C1P60_RS08810	COG4214	carbohydrate transport
C1P60_RS08820	COG4213	ABC transporter substrate-binding protein
C1P60_RS08835	COG1070	Carbohydrate kinase
C1P60_RS08840	COG1070	Carbohydrate kinase
C1P60_RS08880	COG1278	Cold shock
C1P60_RS08885	COG2944	sequence-specific DNA binding
C1P60_RS08900	COG2885	chlorophyll binding
C1P60_RS08905	COG0243	molybdopterin cofactor binding
C1P60_RS08910	COG0456	acetyltransferase
C1P60_RS08915	COG2818	Glycosylase
C1P60_RS08920	COG5571	outer membrane autotransporter
C1P60_RS08925	COG2223	nitrite transmembrane transporter activity
C1P60_RS08945	COG2194	sulfuric ester hydrolase activity
C1P60_RS08955	COG0747	negative chemotaxis
C1P60_RS08960	COG0747	negative chemotaxis
C1P60_RS08970	COG0601	transmembrane transport
C1P60_RS08975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P60_RS08980	COG0444	Belongs to the ABC transporter superfamily
C1P60_RS08985	COG4608	Belongs to the ABC transporter superfamily
C1P60_RS08990	COG0814	amino acid
C1P60_RS09015	COG3385	transposase activity
C1P60_RS09045	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS09050	COG1454	alcohol dehydrogenase
C1P60_RS09055	COG3276	selenocysteine insertion sequence binding
C1P60_RS09065	COG0625	glutathione transferase activity
C1P60_RS09070	COG3209	COG3209 Rhs family protein
C1P60_RS09080	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
C1P60_RS09105	COG1566	PFAM secretion protein HlyD family protein
C1P60_RS09115	COG2213	PTS system mannitol-specific
C1P60_RS09115	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS09125	COG3722	fumarate hydratase activity
C1P60_RS09155	COG5295	Hep Hag repeat protein
C1P60_RS09165	COG5295	Hep Hag repeat protein
C1P60_RS09170	COG1620	l-lactate permease
C1P60_RS09175	COG2186	Transcriptional regulator
C1P60_RS09185	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS09190	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
C1P60_RS09195	COG1045	serine acetyltransferase
C1P60_RS09210	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P60_RS09215	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P60_RS09230	COG4942	peptidase
C1P60_RS09235	COG2861	carbohydrate metabolic process
C1P60_RS09240	COG1216	Glycosyl transferase, family 2
C1P60_RS09250	COG0156	8-amino-7-oxononanoate synthase activity
C1P60_RS09260	COG0859	PFAM glycosyl transferase family 9
C1P60_RS09265	COG0859	PFAM glycosyl transferase family 9
C1P60_RS09270	COG3307	-O-antigen
C1P60_RS09275	COG1216	Glycosyl transferase, family 2
C1P60_RS09280	COG1442	glycosyl transferase family 8
C1P60_RS09285	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C1P60_RS09300	COG0515	serine threonine protein kinase
C1P60_RS09305	COG0438	transferase activity, transferring glycosyl groups
C1P60_RS09310	COG0859	PFAM glycosyl transferase family 9
C1P60_RS09315	COG1519	Transferase
C1P60_RS09345	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C1P60_RS09370	COG1561	YicC-like family, N-terminal region
C1P60_RS09495	COG3645	SOS response
C1P60_RS09500	COG2860	membrane
C1P60_RS09510	COG0194	GDP metabolic process
C1P60_RS09520	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1P60_RS09525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P60_RS09530	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
C1P60_RS09535	COG0786	glutamate:sodium symporter activity
C1P60_RS09540	COG2233	PERMEase
C1P60_RS09545	COG2982	Protein involved in outer membrane biogenesis
C1P60_RS09550	COG1501	Belongs to the glycosyl hydrolase 31 family
C1P60_RS09555	COG2211	Major facilitator Superfamily
C1P60_RS09580	COG3385	transposase activity
C1P60_RS09585	COG2814	Major facilitator Superfamily
C1P60_RS09590	COG0697	spore germination
C1P60_RS09595	COG1464	Belongs to the NlpA lipoprotein family
C1P60_RS09610	COG0641	radical SAM
C1P60_RS09635	COG1113	amino acid transport
C1P60_RS09655	COG2244	polysaccharide biosynthetic process
C1P60_RS09660	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C1P60_RS09665	COG0456	acetyltransferase
C1P60_RS09670	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
C1P60_RS09675	COG1088	dTDP-glucose 4,6-dehydratase activity
C1P60_RS09680	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
C1P60_RS09685	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C1P60_RS09690	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
C1P60_RS09695	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C1P60_RS09700	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
C1P60_RS09710	COG3118	belongs to the thioredoxin family
C1P60_RS09725	COG0210	DNA helicase
C1P60_RS09735	COG3692	DNA binding
C1P60_RS09740	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P60_RS09750	COG0583	DNA-binding transcription factor activity
C1P60_RS09755	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1P60_RS09765	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C1P60_RS09770	COG3978	acetolactate synthase activity
C1P60_RS09790	COG0606	chelatase, subunit chli
C1P60_RS09795	COG3085	chromosome segregation
C1P60_RS09835	COG2186	Transcriptional regulator
C1P60_RS09840	COG0477	Major facilitator Superfamily
C1P60_RS09845	COG1609	Transcriptional regulator
C1P60_RS09850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS09880	COG3385	transposase activity
C1P60_RS09900	COG1522	sequence-specific DNA binding
C1P60_RS09905	COG0716	FMN binding
C1P60_RS09920	COG3312	ion transport
C1P60_RS10000	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS10005	COG4372	Transposase
C1P60_RS10020	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C1P60_RS10025	COG0573	inorganic phosphate transmembrane transporter activity
C1P60_RS10030	COG0581	inorganic phosphate transmembrane transporter activity
C1P60_RS10035	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C1P60_RS10040	COG0704	Plays a role in the regulation of phosphate uptake
C1P60_RS10055	COG2252	PERMEase
C1P60_RS10060	COG0431	NADPH-dependent FMN reductase
C1P60_RS10065	COG2091	lysine biosynthetic process via aminoadipic acid
C1P60_RS10080	COG0814	amino acid
C1P60_RS10145	COG0592	DNA-directed DNA polymerase activity
C1P60_RS10155	COG0187	DNA topoisomerase II activity
C1P60_RS10160	COG3753	Protein conserved in bacteria
C1P60_RS10175	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS10180	COG4372	Transposase
C1P60_RS10195	COG0823	Involved in the tonB-independent uptake of proteins
C1P60_RS10200	COG5645	(Lipo)protein
C1P60_RS10220	COG2188	Transcriptional regulator
C1P60_RS10245	COG0675	Transposase, IS605 OrfB family
C1P60_RS10255	COG2149	membrane
C1P60_RS10265	COG0641	radical SAM
C1P60_RS10270	COG2814	Major facilitator Superfamily
C1P60_RS10285	COG0028	Belongs to the TPP enzyme family
C1P60_RS10290	COG0440	acetolactate synthase activity
C1P60_RS10295	COG2197	response regulator
C1P60_RS10300	COG3851	Histidine kinase
C1P60_RS10305	COG2271	Major facilitator Superfamily
C1P60_RS10310	COG2271	Major facilitator Superfamily
C1P60_RS10320	COG2252	PERMEase
C1P60_RS10340	COG3071	HemY protein
C1P60_RS10345	COG2959	enzyme of heme biosynthesis
C1P60_RS10350	COG1587	Uroporphyrinogen-III synthase
C1P60_RS10360	COG3072	Adenylate cyclase
C1P60_RS10375	COG5567	small periplasmic lipoprotein
C1P60_RS10385	COG3159	Protein conserved in bacteria
C1P60_RS10395	COG1011	Hydrolase
C1P60_RS10400	COG0210	DNA helicase
C1P60_RS10405	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
C1P60_RS10415	COG3698	Phosphodiester glycosidase
C1P60_RS10420	COG0598	Magnesium transport protein CorA
C1P60_RS10435	COG2962	Rard protein
C1P60_RS10440	COG2050	protein possibly involved in aromatic compounds catabolism
C1P60_RS10445	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
C1P60_RS10450	COG0514	ATP-dependent DNA helicase (RecQ)
C1P60_RS10455	COG1280	lysine exporter protein (LysE YggA)
C1P60_RS10460	COG1280	lysine exporter protein (LysE YggA)
C1P60_RS10465	COG2267	carboxylic ester hydrolase activity
C1P60_RS10470	COG0561	phosphatase activity
C1P60_RS10475	COG0697	spore germination
C1P60_RS10480	COG0583	DNA-binding transcription factor activity
C1P60_RS10520	COG0412	Dienelactone hydrolase
C1P60_RS10525	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
C1P60_RS10530	COG1322	Protein conserved in bacteria
C1P60_RS10540	COG3165	ubiquinone biosynthetic process from chorismate
C1P60_RS10550	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P60_RS10555	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P60_RS10560	COG0805	protein transport
C1P60_RS10570	COG0250	Participates in transcription elongation, termination and antitermination
C1P60_RS10580	COG0543	2 iron, 2 sulfur cluster binding
C1P60_RS10600	COG1739	Uncharacterized protein family UPF0029
C1P60_RS10605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C1P60_RS10610	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
C1P60_RS10640	COG1763	Mo-molybdopterin cofactor biosynthetic process
C1P60_RS10645	COG0746	molybdenum cofactor guanylyltransferase activity
C1P60_RS10650	COG3084	Protein conserved in bacteria
C1P60_RS10655	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
C1P60_RS10660	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1P60_RS10665	COG5339	Protein conserved in bacteria
C1P60_RS10670	COG0204	Acyl-transferase
C1P60_RS10680	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C1P60_RS10680	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C1P60_RS10695	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C1P60_RS10705	COG2204	response regulator
C1P60_RS10710	COG3852	Histidine kinase
C1P60_RS10715	COG0174	glutamine synthetase
C1P60_RS10720	COG1217	gtp-binding protein TYPA
C1P60_RS10725	COG1349	DNA-binding transcription factor activity
C1P60_RS10730	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS10740	COG3684	Belongs to the aldolase LacD family
C1P60_RS10745	COG1063	alcohol dehydrogenase
C1P60_RS10785	COG1011	Hydrolase
C1P60_RS10800	COG0456	acetyltransferase
C1P60_RS10810	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P60_RS10815	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P60_RS10825	COG2864	formate dehydrogenase
C1P60_RS10830	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS10895	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C1P60_RS10905	COG2258	MOSC domain
C1P60_RS10910	COG2205	protein histidine kinase activity
C1P60_RS10915	COG0745	RESPONSE REGULATOR receiver
C1P60_RS10920	COG3678	ATP-independent chaperone mediated protein folding
C1P60_RS10935	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C1P60_RS10955	COG3152	Membrane
C1P60_RS10965	COG3691	Protein conserved in bacteria
C1P60_RS10970	COG0589	response to stress
C1P60_RS10980	COG1494	fructose-1,6-bisphosphatase
C1P60_RS10990	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C1P60_RS11005	COG1575	Belongs to the MenA family. Type 1 subfamily
C1P60_RS11020	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
C1P60_RS11025	COG1609	Transcriptional regulator
C1P60_RS11030	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C1P60_RS11060	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
C1P60_RS11070	COG0626	cystathionine gamma-synthase activity
C1P60_RS11075	COG0460	homoserine dehydrogenase
C1P60_RS11075	COG0527	aspartate kinase activity
C1P60_RS11085	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
C1P60_RS11095	COG0697	spore germination
C1P60_RS11100	COG3738	Protein conserved in bacteria
C1P60_RS11105	COG0371	Dehydrogenase
C1P60_RS11110	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1P60_RS11115	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P60_RS11115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS11115	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS11125	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS11130	COG1882	Formate acetyltransferase
C1P60_RS11135	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P60_RS11140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS11150	COG2194	sulfuric ester hydrolase activity
C1P60_RS11165	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
C1P60_RS11180	COG0583	DNA-binding transcription factor activity
C1P60_RS11190	COG1309	transcriptional regulator
C1P60_RS11210	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C1P60_RS11240	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
C1P60_RS11240	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
C1P60_RS11275	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C1P60_RS11280	COG0250	Participates in transcription elongation, termination and antitermination
C1P60_RS11325	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
C1P60_RS11335	COG2104	thiamine diphosphate biosynthetic process
C1P60_RS11375	COG3068	Protein conserved in bacteria
C1P60_RS11390	COG3678	ATP-independent chaperone mediated protein folding
C1P60_RS11395	COG4191	Histidine kinase
C1P60_RS11400	COG2204	response regulator
C1P60_RS11405	COG0151	Belongs to the GarS family
C1P60_RS11445	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
C1P60_RS11450	COG2224	Isocitrate lyase
C1P60_RS11475	COG1283	sodium-dependent phosphate transmembrane transporter activity
C1P60_RS11540	COG0527	aspartate kinase activity
C1P60_RS11570	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P60_RS11595	COG1448	Aminotransferase
C1P60_RS11605	COG0305	Participates in initiation and elongation during chromosome replication
C1P60_RS11610	COG0604	alcohol dehydrogenase
C1P60_RS11620	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C1P60_RS11640	COG0735	belongs to the Fur family
C1P60_RS11645	COG3237	CsbD-like
C1P60_RS11650	COG0534	Mate efflux family protein
C1P60_RS11660	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
C1P60_RS11685	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS11720	COG3700	Belongs to the class B bacterial acid phosphatase family
C1P60_RS11725	COG0432	Pfam Uncharacterised protein family UPF0047
C1P60_RS11730	COG2315	Protein conserved in bacteria
C1P60_RS11735	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C1P60_RS11740	COG0629	single-stranded DNA binding
C1P60_RS11750	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C1P60_RS11765	COG2207	Transcriptional regulator
C1P60_RS11770	COG0789	Transcriptional regulator
C1P60_RS11775	COG2252	PERMEase
C1P60_RS11780	COG0025	NhaP-type Na H and K H
C1P60_RS11800	COG3162	membrane
C1P60_RS11825	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
C1P60_RS11830	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS11835	COG3301	Polysulphide reductase, NrfD
C1P60_RS11840	COG1138	Cytochrome C-type biogenesis protein
C1P60_RS11845	COG3088	subunit of a heme lyase
C1P60_RS11850	COG4235	cytochrome complex assembly
C1P60_RS11855	COG1301	dicarboxylic acid transport
C1P60_RS11875	COG3624	Phosphonate C-P lyase system protein PhnG
C1P60_RS11880	COG2188	Transcriptional regulator
C1P60_RS11885	COG3639	organic phosphonate transmembrane transporter activity
C1P60_RS11890	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
C1P60_RS11900	COG2764	glyoxalase bleomycin resistance protein dioxygenase
C1P60_RS11905	COG2824	Alkylphosphonate utilization operon protein PhnA
C1P60_RS11920	COG0531	amino acid
C1P60_RS11925	COG2207	Transcriptional regulator
C1P60_RS11930	COG1982	Orn Lys Arg decarboxylase major
C1P60_RS11935	COG2169	Transcriptional regulator
C1P60_RS11940	COG1486	melibiose metabolic process
C1P60_RS11985	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS11990	COG4372	Transposase
C1P60_RS12000	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS12010	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12015	COG4372	Transposase
C1P60_RS12020	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12035	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12085	COG4372	Transposase
C1P60_RS12090	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12150	COG3468	outer membrane autotransporter barrel domain protein
C1P60_RS12160	COG4372	Transposase
C1P60_RS12165	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12220	COG4771	TonB-dependent receptor
C1P60_RS12245	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS12255	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS12260	COG4372	Transposase
C1P60_RS12285	COG1309	transcriptional regulator
C1P60_RS12300	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
C1P60_RS12305	COG1027	Aspartate ammonia-lyase
C1P60_RS12310	COG3030	protein affecting phage T7 exclusion by the F plasmid
C1P60_RS12315	COG0531	amino acid
C1P60_RS12340	COG1509	lysine 2,3-aminomutase activity
C1P60_RS12350	COG5510	response to toxic substance
C1P60_RS12355	COG5510	response to toxic substance
C1P60_RS12360	COG2076	Multidrug Resistance protein
C1P60_RS12365	COG3040	lipid binding
C1P60_RS12370	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1P60_RS12385	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1P60_RS12390	COG1053	succinate dehydrogenase
C1P60_RS12415	COG1511	domain protein
C1P60_RS12415	COG3264	Mechanosensitive ion channel
C1P60_RS12455	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C1P60_RS12460	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C1P60_RS12460	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C1P60_RS12465	COG0802	atpase or kinase
C1P60_RS12470	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P60_RS12490	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C1P60_RS12495	COG0330	HflC and HflK could
C1P60_RS12500	COG0330	HflC and HflK could
C1P60_RS12505	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
C1P60_RS12520	COG0557	exoribonuclease II activity
C1P60_RS12525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P60_RS12535	COG3766	membrane
C1P60_RS12540	COG5463	Belongs to the UPF0441 family
C1P60_RS12545	COG0754	glutathionylspermidine amidase activity
C1P60_RS12550	COG1960	acyl-CoA dehydrogenase activity
C1P60_RS12560	COG3650	response to hydrogen peroxide
C1P60_RS12565	COG1073	alpha beta
C1P60_RS12580	COG3037	sugar-specific permease SgaT UlaA
C1P60_RS12610	COG3477	response to acidic pH
C1P60_RS12635	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
C1P60_RS12655	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
C1P60_RS12660	COG4670	ketone body catabolic process
C1P60_RS12665	COG1024	Enoyl-CoA hydratase
C1P60_RS12680	COG1309	transcriptional regulator
C1P60_RS12685	COG3061	Opacity-associated protein A
C1P60_RS12695	COG0545	Peptidyl-prolyl cis-trans isomerase
C1P60_RS12700	COG1113	amino acid transport
C1P60_RS12710	COG0697	spore germination
C1P60_RS12715	COG0702	epimerase
C1P60_RS12720	COG1733	regulation of RNA biosynthetic process
C1P60_RS12740	COG1218	3'(2'),5'-bisphosphate nucleotidase
C1P60_RS12780	COG2814	Major facilitator Superfamily
C1P60_RS12785	COG2733	membrane
C1P60_RS12795	COG1924	4 iron, 4 sulfur cluster binding
C1P60_RS12810	COG0477	Major facilitator Superfamily
C1P60_RS12820	COG3366	ferrous iron transmembrane transporter activity
C1P60_RS12830	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
C1P60_RS12835	COG0583	DNA-binding transcription factor activity
C1P60_RS12875	COG2186	Transcriptional regulator
C1P60_RS12880	COG0246	Mannitol dehydrogenase
C1P60_RS12895	COG3539	Fimbrial protein
C1P60_RS12900	COG3539	Fimbrial protein
C1P60_RS12905	COG3539	Fimbrial protein
C1P60_RS12930	COG3539	Fimbrial protein
C1P60_RS12940	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
C1P60_RS12970	COG0582	viral genome integration into host DNA
C1P60_RS12980	COG1064	alcohol dehydrogenase
C1P60_RS12985	COG0433	COG0433 Predicted ATPase
C1P60_RS12990	COG0795	lipopolysaccharide-transporting ATPase activity
C1P60_RS12995	COG0795	lipopolysaccharide-transporting ATPase activity
C1P60_RS13005	COG2927	DNA polymerase III (CHI subunit)
C1P60_RS13025	COG4269	membrane
C1P60_RS13035	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
C1P60_RS13060	COG2731	YhcH YjgK YiaL family protein
C1P60_RS13065	COG1309	transcriptional regulator
C1P60_RS13070	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS13075	COG0251	oxidation-reduction process
C1P60_RS13095	COG0251	oxidation-reduction process
C1P60_RS13100	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C1P60_RS13110	COG1609	Transcriptional regulator
C1P60_RS13115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS13115	COG1263	PTS System
C1P60_RS13120	COG0366	Alpha amylase catalytic
C1P60_RS13125	COG1328	CTP reductase activity
C1P60_RS13130	COG0602	queuosine metabolic process
C1P60_RS13135	COG3783	Cytochrome b(562)
C1P60_RS13140	COG0312	modulator of DNA gyrase
C1P60_RS13150	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C1P60_RS13160	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P60_RS13165	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P60_RS13175	COG1879	ABC-type sugar transport system periplasmic component
C1P60_RS13180	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C1P60_RS13185	COG2105	PFAM AIG2 family protein
C1P60_RS13190	COG2911	Protein conserved in bacteria
C1P60_RS13195	COG0729	surface antigen
C1P60_RS13205	COG1253	flavin adenine dinucleotide binding
C1P60_RS13215	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
C1P60_RS13260	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS13270	COG0523	cobalamin synthesis protein
C1P60_RS13275	COG2879	small protein
C1P60_RS13280	COG1966	Carbon starvation protein
C1P60_RS13285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C1P60_RS13290	COG2368	4-hydroxyphenylacetate
C1P60_RS13310	COG3971	2-oxopent-4-enoate hydratase activity
C1P60_RS13320	COG3384	dioxygenase
C1P60_RS13325	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS13330	COG0179	Fumarylacetoacetate (FAA) hydrolase
C1P60_RS13335	COG1846	Transcriptional regulator
C1P60_RS13340	COG0840	transmembrane signaling receptor activity
C1P60_RS13365	COG1063	alcohol dehydrogenase
C1P60_RS13380	COG1484	DNA-dependent DNA replication
C1P60_RS13395	COG2966	Psort location CytoplasmicMembrane, score
C1P60_RS13405	COG2197	response regulator
C1P60_RS13415	COG4114	ferric iron reductase
C1P60_RS13445	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
C1P60_RS13450	COG0456	acetyltransferase
C1P60_RS13455	COG1011	Hydrolase
C1P60_RS13465	COG2823	Periplasmic or secreted lipoprotein
C1P60_RS13475	COG4667	esterase of the alpha-beta hydrolase superfamily
C1P60_RS13480	COG0084	hydrolase, TatD family'
C1P60_RS13485	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P60_RS13530	COG3726	membrane protein affecting hemolysin expression
C1P60_RS13535	COG0560	Phosphoserine phosphatase
C1P60_RS13540	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
C1P60_RS13545	COG3172	ATPase kinase involved in NAD metabolism
C1P60_RS13545	COG1056	cytidyltransferase-related domain
C1P60_RS13550	COG0488	(ABC) transporter
C1P60_RS13555	COG0741	lytic transglycosylase activity
C1P60_RS13575	COG2207	Transcriptional regulator
C1P60_RS13575	COG3708	Transcriptional regulator
C1P60_RS13580	COG3045	CreA protein
C1P60_RS13585	COG0745	RESPONSE REGULATOR receiver
C1P60_RS13590	COG2205	protein histidine kinase activity
C1P60_RS13595	COG4452	Inner membrane protein CreD
C1P60_RS13600	COG0745	RESPONSE REGULATOR receiver
C1P60_RS13610	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
C1P60_RS13620	COG0460	homoserine dehydrogenase
C1P60_RS13620	COG0527	aspartate kinase activity
C1P60_RS13630	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C1P60_RS13645	COG1115	amino acid carrier protein
C1P60_RS13655	COG0521	Mo-molybdopterin cofactor biosynthetic process
C1P60_RS13660	COG1584	GPR1 FUN34 yaaH family protein
C1P60_RS13665	COG4735	regulation of single-species biofilm formation
C1P60_RS13710	COG0583	DNA-binding transcription factor activity
C1P60_RS13725	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS13735	COG4372	Transposase
C1P60_RS13765	COG0196	riboflavin kinase activity
C1P60_RS13780	COG1047	Peptidyl-prolyl cis-trans
C1P60_RS13800	COG0505	Belongs to the CarA family
C1P60_RS13805	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C1P60_RS13815	COG2271	Major facilitator Superfamily
C1P60_RS13830	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
C1P60_RS13855	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P60_RS13865	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
C1P60_RS13870	COG0564	pseudouridine synthase activity
C1P60_RS13880	COG0417	DNA replication proofreading
C1P60_RS13885	COG0235	Class ii aldolase
C1P60_RS13900	COG4977	sequence-specific DNA binding
C1P60_RS13905	COG0586	Pfam SNARE associated Golgi protein
C1P60_RS13915	COG1178	ABC-type Fe3 transport system permease component
C1P60_RS13920	COG4143	(ABC) transporter
C1P60_RS13935	COG2814	Major facilitator Superfamily
C1P60_RS13965	COG0583	DNA-binding transcription factor activity
C1P60_RS13975	COG0440	acetolactate synthase activity
C1P60_RS13985	COG1609	Transcriptional regulator
C1P60_RS14000	COG3116	cell division
C1P60_RS14005	COG0768	penicillin binding
C1P60_RS14010	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C1P60_RS14015	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C1P60_RS14030	COG0772	Belongs to the SEDS family
C1P60_RS14045	COG1181	Belongs to the D-alanine--D-alanine ligase family
C1P60_RS14050	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C1P60_RS14055	COG0849	cell division
C1P60_RS14060	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
C1P60_RS14080	COG0494	nUDIX hydrolase
C1P60_RS14095	COG0237	dephospho-CoA kinase activity
C1P60_RS14110	COG4372	Transposase
C1P60_RS14115	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS14150	COG0157	Belongs to the NadC ModD family
C1P60_RS14155	COG3023	N-Acetylmuramoyl-L-alanine amidase
C1P60_RS14160	COG3725	Membrane protein required for beta-lactamase induction
C1P60_RS14165	COG1113	amino acid transport
C1P60_RS14170	COG2186	Transcriptional regulator
C1P60_RS14175	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C1P60_RS14180	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1P60_RS14185	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C1P60_RS14190	COG3064	Membrane
C1P60_RS14195	COG1049	propionate catabolic process, 2-methylcitrate cycle
C1P60_RS14220	COG2132	Multicopper oxidase
C1P60_RS14225	COG4993	Dehydrogenase
C1P60_RS14230	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
C1P60_RS14235	COG0288	reversible hydration of carbon dioxide
C1P60_RS14240	COG1131	(ABC) transporter
C1P60_RS14245	COG0842	Transport permease protein
C1P60_RS14250	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS14260	COG0726	polysaccharide deacetylase
C1P60_RS14270	COG5464	transposase or invertase
C1P60_RS14315	COG3539	Fimbrial protein
C1P60_RS14320	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
C1P60_RS14325	COG0617	tRNA 3'-terminal CCA addition
C1P60_RS14335	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C1P60_RS14345	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
C1P60_RS14350	COG1643	Atp-dependent helicase
C1P60_RS14355	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1P60_RS14365	COG1120	ATPase activity
C1P60_RS14370	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C1P60_RS14375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P60_RS14400	COG2860	membrane
C1P60_RS14405	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C1P60_RS14420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P60_RS14425	COG3835	regulator
C1P60_RS14440	COG1408	metallophosphoesterase
C1P60_RS14455	COG0024	Methionine aminopeptidase
C1P60_RS14480	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
C1P60_RS14485	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C1P60_RS14490	COG0575	Belongs to the CDS family
C1P60_RS14495	COG0750	zinc metalloprotease
C1P60_RS14505	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
C1P60_RS14510	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C1P60_RS14535	COG0587	DNA-directed DNA polymerase activity
C1P60_RS14545	COG1982	Orn Lys Arg decarboxylase major
C1P60_RS14550	COG0346	lactoylglutathione lyase activity
C1P60_RS14560	COG4568	rho-dependent transcription termination
C1P60_RS14570	COG4681	YaeQ
C1P60_RS14575	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
C1P60_RS14580	COG3015	lipoprotein NlpE involved in copper resistance
C1P60_RS14585	COG0791	NLP P60 protein
C1P60_RS14595	COG1720	tRNA m6t6A37 methyltransferase activity
C1P60_RS14605	COG1464	Belongs to the NlpA lipoprotein family
C1P60_RS14610	COG2011	ABC-type metal ion transport system permease component
C1P60_RS14615	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C1P60_RS14620	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
C1P60_RS14660	COG0583	DNA-binding transcription factor activity
C1P60_RS14670	COG2226	methyltransferase
C1P60_RS14675	COG0741	lytic transglycosylase activity
C1P60_RS14675	COG1388	LysM domain
C1P60_RS14685	COG2226	methyltransferase
C1P60_RS14695	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P60_RS14710	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1P60_RS14720	COG1960	acyl-CoA dehydrogenase activity
C1P60_RS14730	COG0121	glutamine amidotransferase
C1P60_RS14735	COG3034	peptidoglycan biosynthetic process
C1P60_RS14745	COG0791	NLP P60 protein
C1P60_RS14775	COG0454	-acetyltransferase
C1P60_RS14780	COG1690	Belongs to the RtcB family
C1P60_RS14785	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS14800	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
C1P60_RS14805	COG2195	Cleaves the N-terminal amino acid of tripeptides
C1P60_RS14825	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C1P60_RS14870	COG4197	protein conserved in bacteria, prophage-related
C1P60_RS14875	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1P60_RS14905	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS14910	COG4372	Transposase
C1P60_RS14915	COG1556	Lactate utilization protein
C1P60_RS14920	COG1139	Iron-sulfur cluster binding protein
C1P60_RS14925	COG0247	lactate metabolic process
C1P60_RS14935	COG2207	Transcriptional regulator
C1P60_RS14975	COG3059	membrane
C1P60_RS14980	COG0656	L-ascorbic acid biosynthetic process
C1P60_RS14985	COG3708	Transcriptional regulator
C1P60_RS14985	COG2207	Transcriptional regulator
C1P60_RS15010	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS15030	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C1P60_RS15035	COG4521	taurine ABC transporter
C1P60_RS15045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C1P60_RS15050	COG2175	clavaminate synthase activity
C1P60_RS15065	COG0113	porphobilinogen synthase activity
C1P60_RS15090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P60_RS15095	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1P60_RS15100	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
C1P60_RS15120	COG1181	Belongs to the D-alanine--D-alanine ligase family
C1P60_RS15130	COG1785	Belongs to the alkaline phosphatase family
C1P60_RS15140	COG3706	GGDEF domain
C1P60_RS15145	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
C1P60_RS15165	COG4126	flavin adenine dinucleotide binding
C1P60_RS15190	COG1940	carbohydrate kinase activity
C1P60_RS15195	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS15205	COG2814	Major facilitator Superfamily
C1P60_RS15210	COG0419	ATPase involved in DNA repair
C1P60_RS15215	COG0420	3'-5' exonuclease activity
C1P60_RS15220	COG0745	RESPONSE REGULATOR receiver
C1P60_RS15225	COG5002	protein histidine kinase activity
C1P60_RS15230	COG1114	Component of the transport system for branched-chain amino acids
C1P60_RS15235	COG1113	amino acid transport
C1P60_RS15260	COG1862	Preprotein translocase
C1P60_RS15265	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1P60_RS15270	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1P60_RS15275	COG1403	HNH endonuclease
C1P60_RS15285	COG3248	Nucleoside-binding outer membrane protein
C1P60_RS15290	COG4238	major outer membrane lipoprotein
C1P60_RS15300	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1P60_RS15300	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1P60_RS15315	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
C1P60_RS15320	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
C1P60_RS15325	COG0667	Aldo Keto reductase
C1P60_RS15335	COG0142	geranyltranstransferase activity
C1P60_RS15350	COG0693	protein deglycase activity
C1P60_RS15355	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C1P60_RS15365	COG2814	Major facilitator Superfamily
C1P60_RS15375	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
C1P60_RS15380	COG1845	cytochrome c oxidase, subunit III
C1P60_RS15385	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C1P60_RS15390	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
C1P60_RS15395	COG2223	nitrite transmembrane transporter activity
C1P60_RS15400	COG3056	Lipoprotein
C1P60_RS15405	COG0271	Belongs to the BolA IbaG family
C1P60_RS15425	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
C1P60_RS15430	COG0776	regulation of translation
C1P60_RS15435	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P60_RS15440	COG1555	photosystem II stabilization
C1P60_RS15445	COG0824	Thioesterase
C1P60_RS15455	COG4533	DNA binding
C1P60_RS15465	COG1522	sequence-specific DNA binding
C1P60_RS15470	COG1132	(ABC) transporter
C1P60_RS15495	COG0347	Belongs to the P(II) protein family
C1P60_RS15500	COG0004	ammonium transporteR
C1P60_RS15505	COG1946	Acyl-CoA thioesterase
C1P60_RS15515	COG3385	transposase activity
C1P60_RS15520	COG3695	enzyme binding
C1P60_RS15530	COG5507	3-demethylubiquinone-9 3-methyltransferase
C1P60_RS15535	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C1P60_RS15550	COG0110	maltose O-acetyltransferase activity
C1P60_RS15565	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P60_RS15570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P60_RS15575	COG1309	transcriptional regulator
C1P60_RS15580	COG1196	nuclear chromosome segregation
C1P60_RS15580	COG3264	Mechanosensitive ion channel
C1P60_RS15590	COG3923	Primosomal replication protein n
C1P60_RS15605	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C1P60_RS15640	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS15645	COG4651	solute:proton antiporter activity
C1P60_RS15645	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1P60_RS15650	COG2223	nitrite transmembrane transporter activity
C1P60_RS15665	COG0737	Belongs to the 5'-nucleotidase family
C1P60_RS15670	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C1P60_RS15675	COG3735	TraB family
C1P60_RS15685	COG3093	addiction module antidote protein HigA
C1P60_RS15690	COG2217	Heavy metal translocating P-type atpase
C1P60_RS15700	COG0531	amino acid
C1P60_RS15705	COG0789	Transcriptional regulator
C1P60_RS15710	COG1585	Membrane protein implicated in regulation of membrane protease activity
C1P60_RS15715	COG0330	HflC and HflK could
C1P60_RS15720	COG4619	ABC transporter
C1P60_RS15725	COG0390	transport system, permease component
C1P60_RS15730	COG3118	belongs to the thioredoxin family
C1P60_RS15735	COG0300	oxidoreductase activity
C1P60_RS15740	COG2755	lipolytic protein G-D-S-L family
C1P60_RS15745	COG4181	ATPase activity
C1P60_RS15750	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
C1P60_RS15785	COG0583	DNA-binding transcription factor activity
C1P60_RS15795	COG1414	Transcriptional regulator
C1P60_RS15800	COG3960	tartronate-semialdehyde synthase activity
C1P60_RS15805	COG3622	Belongs to the hyi family
C1P60_RS15830	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
C1P60_RS15845	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
C1P60_RS15850	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
C1P60_RS15860	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C1P60_RS15870	COG1988	membrane-bound metal-dependent
C1P60_RS15875	COG2501	S4 domain
C1P60_RS15890	COG2197	response regulator
C1P60_RS15920	COG1113	amino acid transport
C1P60_RS15925	COG0668	transmembrane transport
C1P60_RS15930	COG0778	Nitroreductase
C1P60_RS15935	COG2315	Protein conserved in bacteria
C1P60_RS15945	COG3385	transposase activity
C1P60_RS15990	COG2977	Belongs to the P-Pant transferase superfamily
C1P60_RS15995	COG4771	TonB-dependent receptor
C1P60_RS16000	COG2382	esterase
C1P60_RS16005	COG3251	PFAM MbtH domain protein
C1P60_RS16010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C1P60_RS16010	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
C1P60_RS16015	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
C1P60_RS16020	COG1120	ATPase activity
C1P60_RS16025	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P60_RS16030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P60_RS16040	COG4592	Periplasmic binding protein
C1P60_RS16045	COG1169	isochorismate synthase
C1P60_RS16050	COG1021	2,3-dihydroxybenzoate-AMP ligase
C1P60_RS16055	COG1535	isochorismatase
C1P60_RS16055	COG3433	isochorismatase activity
C1P60_RS16060	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS16065	COG2050	protein possibly involved in aromatic compounds catabolism
C1P60_RS16070	COG1966	Carbon starvation protein
C1P60_RS16075	COG2879	small protein
C1P60_RS16080	COG0371	Dehydrogenase
C1P60_RS16105	COG3969	phosphoadenosine phosphosulfate
C1P60_RS16120	COG4372	Transposase
C1P60_RS16125	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS16135	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS16160	COG0450	alkyl hydroperoxide reductase
C1P60_RS16165	COG3634	alkyl hydroperoxide reductase activity
C1P60_RS16170	COG0589	response to stress
C1P60_RS16180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1P60_RS16185	COG3719	Belongs to the RNase T2 family
C1P60_RS16205	COG3051	citrate lyase alpha subunit
C1P60_RS16210	COG2301	Belongs to the HpcH HpaI aldolase family
C1P60_RS16220	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
C1P60_RS16240	COG4565	transcriptional regulatory protein
C1P60_RS16245	COG3069	C4-dicarboxylate transmembrane transporter activity
C1P60_RS16265	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1P60_RS16270	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P60_RS16300	COG1686	Belongs to the peptidase S11 family
C1P60_RS16305	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
C1P60_RS16310	COG0772	Belongs to the SEDS family
C1P60_RS16315	COG0768	penicillin binding
C1P60_RS16325	COG0799	negative regulation of ribosome biogenesis
C1P60_RS16340	COG1466	dna polymerase III delta subunit
C1P60_RS16355	COG2888	peptidyl-tyrosine sulfation
C1P60_RS16360	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
C1P60_RS16380	COG2214	Heat shock protein DnaJ domain protein
C1P60_RS16385	COG2214	Heat shock protein DnaJ domain protein
C1P60_RS16395	COG2214	Heat shock protein DnaJ domain protein
C1P60_RS16400	COG0443	Heat shock 70 kDa protein
C1P60_RS16410	COG1126	abc transporter atp-binding protein
C1P60_RS16415	COG0765	amino acid transport
C1P60_RS16420	COG0765	amino acid transport
C1P60_RS16440	COG0815	Transfers the fatty acyl group on membrane lipoproteins
C1P60_RS16445	COG4535	Mg2 and Co2 transporter CorC
C1P60_RS16455	COG1702	phosphate starvation-inducible protein PhoH
C1P60_RS16465	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P60_RS16505	COG0367	asparagine synthase
C1P60_RS16510	COG0647	UMP catabolic process
C1P60_RS16515	COG1940	carbohydrate kinase activity
C1P60_RS16515	COG1846	Transcriptional regulator
C1P60_RS16520	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
C1P60_RS16530	COG2190	(PTS) system
C1P60_RS16530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS16530	COG1263	PTS System
C1P60_RS16550	COG0735	belongs to the Fur family
C1P60_RS16560	COG0716	FMN binding
C1P60_RS16570	COG0596	Alpha beta hydrolase
C1P60_RS16575	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
C1P60_RS16580	COG0033	Phosphoglucomutase
C1P60_RS16605	COG0745	RESPONSE REGULATOR receiver
C1P60_RS16610	COG2205	protein histidine kinase activity
C1P60_RS16660	COG3209	COG3209 Rhs family protein
C1P60_RS16685	COG3272	Protein of unknown function (DUF1722)
C1P60_RS16690	COG0415	Belongs to the DNA photolyase family
C1P60_RS16700	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C1P60_RS16705	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C1P60_RS16710	COG1984	allophanate hydrolase subunit 2
C1P60_RS16725	COG3180	Ammonia monooxygenase
C1P60_RS16735	COG3121	Chaperone
C1P60_RS16740	COG3188	usher protein
C1P60_RS16755	COG0372	Belongs to the citrate synthase family
C1P60_RS16765	COG2009	succinate dehydrogenase
C1P60_RS16770	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
C1P60_RS16775	COG1053	succinate dehydrogenase
C1P60_RS16780	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1P60_RS16785	COG0567	Dehydrogenase, E1 component
C1P60_RS16790	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1P60_RS16800	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
C1P60_RS16805	COG2188	Transcriptional regulator
C1P60_RS16820	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS16860	COG1271	oxidase subunit
C1P60_RS16865	COG1294	oxidase, subunit
C1P60_RS16870	COG4890	Cyd operon protein YbgT
C1P60_RS16875	COG3790	cyd operon protein YbgE
C1P60_RS16880	COG0824	Thioesterase
C1P60_RS16885	COG0811	peptide transport
C1P60_RS16890	COG0848	biopolymer transport protein
C1P60_RS16895	COG3064	Membrane
C1P60_RS16905	COG2885	chlorophyll binding
C1P60_RS16910	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
C1P60_RS16950	COG3201	nicotinamide mononucleotide transporter
C1P60_RS16955	COG1230	cation diffusion facilitator family transporter
C1P60_RS16965	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C1P60_RS16975	COG2017	converts alpha-aldose to the beta-anomer
C1P60_RS16985	COG1085	galactose-1-phosphate uridylyltransferase
C1P60_RS16990	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C1P60_RS16995	COG1119	ATPase activity
C1P60_RS17000	COG3585	molybdate ion transport
C1P60_RS17000	COG2005	Transcriptional regulator
C1P60_RS17010	COG0725	ABC transporter, periplasmic molybdate-binding protein
C1P60_RS17015	COG4149	molybdate abc transporter
C1P60_RS17025	COG0561	phosphatase activity
C1P60_RS17030	COG0582	viral genome integration into host DNA
C1P60_RS17055	COG1396	sequence-specific DNA binding
C1P60_RS17065	COG3646	Phage regulatory protein
C1P60_RS17110	COG4372	Transposase
C1P60_RS17115	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS17125	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS17150	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS17155	COG4372	Transposase
C1P60_RS17195	COG4676	Protein conserved in bacteria
C1P60_RS17200	COG2205	protein histidine kinase activity
C1P60_RS17200	COG0784	Response regulator, receiver
C1P60_RS17205	COG2197	response regulator
C1P60_RS17210	COG2198	Histidine kinase
C1P60_RS17210	COG0642	Histidine kinase
C1P60_RS17215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C1P60_RS17220	COG1477	protein flavinylation
C1P60_RS17225	COG2169	Transcriptional regulator
C1P60_RS17225	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1P60_RS17230	COG3145	DNA-N1-methyladenine dioxygenase activity
C1P60_RS17235	COG4615	Cyclic peptide transporter
C1P60_RS17250	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS17250	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P60_RS17255	COG3062	negative regulation of establishment of protein localization
C1P60_RS17265	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS17270	COG0348	domain, Protein
C1P60_RS17275	COG3043	anaerobic respiration
C1P60_RS17280	COG3005	denitrification pathway
C1P60_RS17285	COG4133	protoheme IX ABC transporter activity
C1P60_RS17290	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P60_RS17295	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P60_RS17300	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P60_RS17310	COG1138	Cytochrome C-type biogenesis protein
C1P60_RS17315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C1P60_RS17320	COG3088	subunit of a heme lyase
C1P60_RS17320	COG4235	cytochrome complex assembly
C1P60_RS17325	COG2197	response regulator
C1P60_RS17335	COG3468	outer membrane autotransporter barrel domain protein
C1P60_RS17345	COG3083	sulfuric ester hydrolase activity
C1P60_RS17365	COG1061	Type III restriction enzyme res subunit
C1P60_RS17370	COG1187	pseudouridine synthase activity
C1P60_RS17385	COG4172	Belongs to the ABC transporter superfamily
C1P60_RS17390	COG4239	(ABC) transporter, permease
C1P60_RS17395	COG4174	ABC transporter (Permease)
C1P60_RS17400	COG4166	transmembrane transport
C1P60_RS17405	COG2200	EAL domain
C1P60_RS17410	COG0791	NLP P60 protein
C1P60_RS17415	COG0671	phosphoesterase, PA-phosphatase related
C1P60_RS17420	COG0523	cobalamin synthesis protein
C1P60_RS17450	COG2814	Major facilitator Superfamily
C1P60_RS17455	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS17455	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS17460	COG1105	Belongs to the carbohydrate kinase PfkB family
C1P60_RS17465	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
C1P60_RS17465	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS17465	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P60_RS17475	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS17480	COG2313	pseudouridylate synthase activity
C1P60_RS17485	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P60_RS17500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P60_RS17505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS17505	COG1522	sequence-specific DNA binding
C1P60_RS17515	COG2855	membrane
C1P60_RS17520	COG0583	DNA-binding transcription factor activity
C1P60_RS17525	COG0833	amino acid
C1P60_RS17550	COG2311	Membrane
C1P60_RS17560	COG1879	ABC-type sugar transport system periplasmic component
C1P60_RS17575	COG1129	ABC transporter
C1P60_RS17595	COG4211	Belongs to the binding-protein-dependent transport system permease family
C1P60_RS17600	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
C1P60_RS17600	COG0167	dihydroorotate dehydrogenase activity
C1P60_RS17615	COG2949	membrane
C1P60_RS17625	COG1346	cytolysis
C1P60_RS17650	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS17655	COG0586	Pfam SNARE associated Golgi protein
C1P60_RS17665	COG1686	Belongs to the peptidase S11 family
C1P60_RS17670	COG0277	FAD linked oxidase domain protein
C1P60_RS17675	COG1472	Belongs to the glycosyl hydrolase 3 family
C1P60_RS17685	COG1174	glycine betaine transport
C1P60_RS17690	COG1125	glycine betaine transport
C1P60_RS17695	COG1174	glycine betaine transport
C1P60_RS17710	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS17715	COG4372	Transposase
C1P60_RS17730	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS17740	COG5455	response to cobalt ion
C1P60_RS17755	COG3539	Fimbrial protein
C1P60_RS17765	COG0489	protein tyrosine kinase activity
C1P60_RS17810	COG4807	Protein conserved in bacteria
C1P60_RS17815	COG3279	Response regulator of the LytR AlgR family
C1P60_RS17820	COG3275	phosphorelay sensor kinase activity
C1P60_RS17850	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
C1P60_RS17855	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P60_RS18005	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS18010	COG4372	Transposase
C1P60_RS18025	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS18045	COG3443	Belongs to the bacterial solute-binding protein 9 family
C1P60_RS18060	COG2351	hydroxyisourate hydrolase activity
C1P60_RS18065	COG0745	RESPONSE REGULATOR receiver
C1P60_RS18070	COG2205	protein histidine kinase activity
C1P60_RS18090	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C1P60_RS18110	COG1418	mRNA catabolic process
C1P60_RS18115	COG0270	DNA (cytosine-5-)-methyltransferase activity
C1P60_RS18120	COG3727	T/G mismatch-specific endonuclease activity
C1P60_RS18125	COG0697	spore germination
C1P60_RS18220	COG3772	lysozyme
C1P60_RS18260	COG1560	Kdo2-lipid A biosynthetic process
C1P60_RS18265	COG0739	heme binding
C1P60_RS18270	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
C1P60_RS18280	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1P60_RS18320	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
C1P60_RS18335	COG1376	ErfK ybiS ycfS ynhG family protein
C1P60_RS18345	COG0583	DNA-binding transcription factor activity
C1P60_RS18350	COG0583	DNA-binding transcription factor activity
C1P60_RS18370	COG3209	COG3209 Rhs family protein
C1P60_RS18395	COG0582	viral genome integration into host DNA
C1P60_RS18415	COG0217	transcriptional regulatory protein
C1P60_RS18420	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C1P60_RS18435	COG0477	Major facilitator Superfamily
C1P60_RS18500	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS18510	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS18515	COG1403	HNH endonuclease
C1P60_RS18555	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS18560	COG4372	Transposase
C1P60_RS18590	COG3778	Protein conserved in bacteria
C1P60_RS18625	COG0500	methyltransferase
C1P60_RS18650	COG1877	trehalose-phosphatase activity
C1P60_RS18655	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P60_RS18665	COG1879	ABC-type sugar transport system periplasmic component
C1P60_RS18670	COG1528	Iron-storage protein
C1P60_RS18695	COG1528	Iron-storage protein
C1P60_RS18705	COG0814	amino acid
C1P60_RS18710	COG3318	Belongs to the UPF0149 family
C1P60_RS18710	COG3012	SEC-C Motif Domain Protein
C1P60_RS18740	COG2197	response regulator
C1P60_RS18755	COG2197	response regulator
C1P60_RS18760	COG1126	abc transporter atp-binding protein
C1P60_RS18765	COG0765	amino acid transport
C1P60_RS18775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P60_RS18795	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
C1P60_RS18800	COG1516	flagellar protein fliS
C1P60_RS18810	COG0366	Alpha amylase catalytic
C1P60_RS18820	COG2391	methyltransferase activity
C1P60_RS18825	COG0425	Belongs to the sulfur carrier protein TusA family
C1P60_RS18830	COG2135	peptidase activity
C1P60_RS18835	COG0675	Transposase, IS605 OrfB family
C1P60_RS18850	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C1P60_RS18855	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C1P60_RS18860	COG3190	flagellar
C1P60_RS18865	COG1338	Plays a role in the flagellum-specific transport system
C1P60_RS18870	COG1987	bacterial-type flagellum assembly
C1P60_RS18875	COG1684	flagellar biosynthetic protein fliR
C1P60_RS18880	COG2197	response regulator
C1P60_RS18910	COG5475	Uncharacterized small protein (DUF2158)
C1P60_RS18915	COG2354	Protein conserved in bacteria
C1P60_RS18945	COG2433	Pfam Transposase IS66
C1P60_RS18995	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P60_RS19040	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19045	COG1335	isochorismatase
C1P60_RS19055	COG0494	nUDIX hydrolase
C1P60_RS19060	COG0217	transcriptional regulatory protein
C1P60_RS19080	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19090	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS19095	COG4372	Transposase
C1P60_RS19105	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19130	COG2003	Belongs to the UPF0758 family
C1P60_RS19160	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19180	COG0351	phosphomethylpyrimidine kinase
C1P60_RS19185	COG3757	hydrolase, family 25
C1P60_RS19190	COG2188	Transcriptional regulator
C1P60_RS19195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P60_RS19200	COG1397	ADP-ribosylglycohydrolase
C1P60_RS19205	COG2211	Major facilitator Superfamily
C1P60_RS19210	COG1830	Aldolase
C1P60_RS19225	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS19230	COG3414	Phosphotransferase system galactitol-specific IIB component
C1P60_RS19235	COG3775	system Galactitol-specific IIC component
C1P60_RS19240	COG1063	alcohol dehydrogenase
C1P60_RS19265	COG0826	peptidase U32
C1P60_RS19275	COG3609	addiction module antidote protein, CC2985 family
C1P60_RS19285	COG0745	RESPONSE REGULATOR receiver
C1P60_RS19290	COG2205	protein histidine kinase activity
C1P60_RS19330	COG4245	von Willebrand factor, type A
C1P60_RS19335	COG0631	protein serine/threonine phosphatase activity
C1P60_RS19340	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
C1P60_RS19345	COG0443	Heat shock 70 kDa protein
C1P60_RS19350	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
C1P60_RS19355	COG5001	Diguanylate cyclase
C1P60_RS19355	COG5002	protein histidine kinase activity
C1P60_RS19355	COG3447	MASE1 domain protein
C1P60_RS19360	COG0572	uridine kinase
C1P60_RS19370	COG2982	Protein involved in outer membrane biogenesis
C1P60_RS19375	COG1253	flavin adenine dinucleotide binding
C1P60_RS19380	COG1596	polysaccharide export
C1P60_RS19385	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1P60_RS19390	COG3206	protein involved in exopolysaccharide biosynthesis
C1P60_RS19390	COG0489	protein tyrosine kinase activity
C1P60_RS19395	COG0463	Glycosyl transferase, family 2
C1P60_RS19400	COG1045	serine acetyltransferase
C1P60_RS19405	COG0438	transferase activity, transferring glycosyl groups
C1P60_RS19415	COG1216	Glycosyl transferase, family 2
C1P60_RS19420	COG0110	maltose O-acetyltransferase activity
C1P60_RS19425	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
C1P60_RS19430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P60_RS19435	COG1051	belongs to the nudix hydrolase family
C1P60_RS19440	COG0297	glycogen (starch) synthase activity
C1P60_RS19445	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
C1P60_RS19445	COG0662	Cupin 2, conserved barrel domain protein
C1P60_RS19450	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C1P60_RS19460	COG2244	polysaccharide biosynthetic process
C1P60_RS19465	COG2327	Polysaccharide pyruvyl transferase
C1P60_RS19470	COG0438	transferase activity, transferring glycosyl groups
C1P60_RS19480	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C1P60_RS19490	COG1215	transferase activity, transferring glycosyl groups
C1P60_RS19500	COG0438	transferase activity, transferring glycosyl groups
C1P60_RS19510	COG0438	transferase activity, transferring glycosyl groups
C1P60_RS19515	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
C1P60_RS19540	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
C1P60_RS19540	COG0140	phosphoribosyl-ATP diphosphatase activity
C1P60_RS19555	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
C1P60_RS19560	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
C1P60_RS19560	COG0131	Imidazoleglycerol-phosphate dehydratase
C1P60_RS19570	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
C1P60_RS19585	COG2161	toxin-antitoxin pair type II binding
C1P60_RS19590	COG4115	mRNA cleavage
C1P60_RS19595	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P60_RS19600	COG0583	DNA-binding transcription factor activity
C1P60_RS19610	COG0531	amino acid
C1P60_RS19615	COG2391	methyltransferase activity
C1P60_RS19620	COG0425	Belongs to the sulfur carrier protein TusA family
C1P60_RS19625	COG2925	Exonuclease
C1P60_RS19660	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19685	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS19740	COG3772	lysozyme
C1P60_RS19800	COG0484	heat shock protein binding
C1P60_RS19805	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
C1P60_RS19825	COG1484	DNA-dependent DNA replication
C1P60_RS19850	COG3646	Phage regulatory protein
C1P60_RS19865	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1P60_RS19960	COG0789	Transcriptional regulator
C1P60_RS19965	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS20010	COG2850	peptidyl-arginine hydroxylation
C1P60_RS20015	COG2205	protein histidine kinase activity
C1P60_RS20025	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1P60_RS20045	COG1187	pseudouridine synthase activity
C1P60_RS20050	COG0538	isocitrate dehydrogenase activity
C1P60_RS20065	COG5562	phage envelope protein
C1P60_RS20070	COG0789	Transcriptional regulator
C1P60_RS20075	COG2200	EAL domain
C1P60_RS20155	COG2894	cell division
C1P60_RS20185	COG0179	Fumarylacetoacetate (FAA) hydrolase
C1P60_RS20200	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1P60_RS20225	COG2719	SpoVR family
C1P60_RS20235	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C1P60_RS20245	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS20255	COG1619	proteins homologs of microcin C7 resistance protein MccF
C1P60_RS20265	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
C1P60_RS20290	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P60_RS20290	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS20290	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
C1P60_RS20295	COG1461	Dihydroxyacetone kinase
C1P60_RS20300	COG2376	Dihydroxyacetone kinase
C1P60_RS20305	COG3284	Transcriptional regulator
C1P60_RS20325	COG0012	GTP binding
C1P60_RS20340	COG0659	secondary active sulfate transmembrane transporter activity
C1P60_RS20345	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C1P60_RS20370	COG2890	protein-(glutamine-N5) methyltransferase activity
C1P60_RS20375	COG3094	Invasion gene expression up-regulator, SirB
C1P60_RS20380	COG2912	Transglutaminase-like superfamily
C1P60_RS20405	COG0387	Pfam Sodium calcium exchanger
C1P60_RS20410	COG4572	Cation transport regulator
C1P60_RS20415	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
C1P60_RS20420	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
C1P60_RS20425	COG4932	domain protein
C1P60_RS20430	COG2197	response regulator
C1P60_RS20435	COG3850	Histidine kinase
C1P60_RS20440	COG2223	nitrite transmembrane transporter activity
C1P60_RS20445	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
C1P60_RS20450	COG1140	nitrate reductase beta subunit
C1P60_RS20455	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
C1P60_RS20460	COG2181	nitrate reductase activity
C1P60_RS20480	COG0788	formyltetrahydrofolate deformylase activity
C1P60_RS20490	COG1752	Esterase of the alpha-beta hydrolase superfamily
C1P60_RS20495	COG0745	RESPONSE REGULATOR receiver
C1P60_RS20500	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C1P60_RS20510	COG1435	thymidine kinase activity
C1P60_RS20520	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS20520	COG1454	alcohol dehydrogenase
C1P60_RS20525	COG2095	MarC family integral membrane protein
C1P60_RS20540	COG4166	transmembrane transport
C1P60_RS20545	COG0601	transmembrane transport
C1P60_RS20550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P60_RS20555	COG0444	Belongs to the ABC transporter superfamily
C1P60_RS20560	COG4608	Belongs to the ABC transporter superfamily
C1P60_RS20580	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1P60_RS20585	COG2350	Protein conserved in bacteria
C1P60_RS20595	COG1607	acyl-coa hydrolase
C1P60_RS20615	COG3047	cAMP biosynthetic process
C1P60_RS20635	COG0135	phosphoribosylanthranilate isomerase activity
C1P60_RS20635	COG0134	indole-3-glycerol-phosphate synthase activity
C1P60_RS20640	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1P60_RS20640	COG0512	Glutamine amidotransferase of anthranilate synthase
C1P60_RS20655	COG0613	PHP domain protein
C1P60_RS20660	COG0009	L-threonylcarbamoyladenylate synthase
C1P60_RS20665	COG4907	membrane protein (DUF2207)
C1P60_RS20670	COG1187	pseudouridine synthase activity
C1P60_RS20680	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS20685	COG0616	signal peptide processing
C1P60_RS20695	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C1P60_RS20705	COG0583	DNA-binding transcription factor activity
C1P60_RS20740	COG0671	phosphoesterase, PA-phosphatase related
C1P60_RS20745	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
C1P60_RS20750	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
C1P60_RS20760	COG0023	Translation Initiation Factor
C1P60_RS20775	COG1349	DNA-binding transcription factor activity
C1P60_RS20785	COG5001	Diguanylate cyclase
C1P60_RS20805	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P60_RS20805	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P60_RS20810	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
C1P60_RS20815	COG2852	Protein conserved in bacteria
C1P60_RS20820	COG4172	Belongs to the ABC transporter superfamily
C1P60_RS20825	COG4172	Belongs to the ABC transporter superfamily
C1P60_RS20830	COG4171	peptide transport system, permease
C1P60_RS20835	COG4168	peptide transport system, permease
C1P60_RS20840	COG4166	transmembrane transport
C1P60_RS20850	COG0531	amino acid
C1P60_RS20860	COG0174	glutamine synthetase
C1P60_RS20870	COG1917	Cupin 2, conserved barrel domain protein
C1P60_RS20870	COG1396	sequence-specific DNA binding
C1P60_RS20875	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS20880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1P60_RS20885	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C1P60_RS20890	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
C1P60_RS20895	COG1842	Phage shock protein A
C1P60_RS20905	COG1983	PspC domain protein
C1P60_RS20915	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P60_RS20920	COG0366	Alpha amylase catalytic
C1P60_RS20940	COG3842	ATPase activity
C1P60_RS20950	COG1609	Transcriptional regulator
C1P60_RS20955	COG3106	COG3106 Predicted ATPase
C1P60_RS20965	COG3283	Transcriptional regulator of aromatic amino acids metabolism
C1P60_RS20970	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
C1P60_RS20975	COG4948	Mandelate Racemase Muconate Lactonizing
C1P60_RS20980	COG2866	Carboxypeptidase
C1P60_RS21005	COG1073	alpha beta
C1P60_RS21015	COG0583	DNA-binding transcription factor activity
C1P60_RS21020	COG4166	transmembrane transport
C1P60_RS21025	COG0668	transmembrane transport
C1P60_RS21035	COG3182	Iron-regulated membrane protein
C1P60_RS21040	COG0589	response to stress
C1P60_RS21045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P60_RS21050	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1P60_RS21070	COG1473	amidohydrolase
C1P60_RS21080	COG0583	DNA-binding transcription factor activity
C1P60_RS21085	COG2840	Smr protein MutS2
C1P60_RS21090	COG3706	GGDEF domain
C1P60_RS21100	COG0513	Belongs to the DEAD box helicase family
C1P60_RS21110	COG0582	viral genome integration into host DNA
C1P60_RS21135	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C1P60_RS21195	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS21215	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1P60_RS21220	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1P60_RS21225	COG1121	(ABC) transporter
C1P60_RS21235	COG0589	response to stress
C1P60_RS21240	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C1P60_RS21245	COG0674	pyruvate-flavodoxin oxidoreductase activity
C1P60_RS21245	COG1013	pyruvate-flavodoxin oxidoreductase activity
C1P60_RS21245	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
C1P60_RS21245	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P60_RS21250	COG3042	response to heat
C1P60_RS21255	COG3187	Heat shock protein
C1P60_RS21260	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C1P60_RS21265	COG2911	Protein conserved in bacteria
C1P60_RS21275	COG3784	Protein of unknown function (DUF1318)
C1P60_RS21285	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C1P60_RS21305	COG2453	phosphatase
C1P60_RS21305	COG0671	phosphoesterase, PA-phosphatase related
C1P60_RS21315	COG1643	Atp-dependent helicase
C1P60_RS21320	COG1434	Gram-negative-bacterium-type cell wall biogenesis
C1P60_RS21325	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS21340	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C1P60_RS21345	COG3038	cytochrome b561
C1P60_RS21370	COG4372	Transposase
C1P60_RS21375	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS21385	COG0840	transmembrane signaling receptor activity
C1P60_RS21390	COG0583	DNA-binding transcription factor activity
C1P60_RS21395	COG5383	Protein conserved in bacteria
C1P60_RS21405	COG2841	Protein conserved in bacteria
C1P60_RS21410	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P60_RS21415	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C1P60_RS21420	COG4372	Transposase
C1P60_RS21425	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS21440	COG1275	C4-dicarboxylate transporter malic acid transport protein
C1P60_RS21445	COG0500	methyltransferase
C1P60_RS21485	COG4372	Transposase
C1P60_RS21505	COG2723	6-phospho-beta-galactosidase activity
C1P60_RS21525	COG4977	sequence-specific DNA binding
C1P60_RS21530	COG1846	Transcriptional regulator
C1P60_RS21535	COG2095	MarC family integral membrane protein
C1P60_RS21555	COG0583	DNA-binding transcription factor activity
C1P60_RS21560	COG1012	belongs to the aldehyde dehydrogenase family
C1P60_RS21565	COG2066	Belongs to the glutaminase family
C1P60_RS21575	COG2199	diguanylate cyclase activity
C1P60_RS21595	COG3781	membrane
C1P60_RS21650	COG1802	Transcriptional regulator
C1P60_RS21655	COG4221	oxidoreductase activity
C1P60_RS21660	COG0339	signal peptide processing
C1P60_RS21665	COG1546	Belongs to the CinA family
C1P60_RS21670	COG3111	PFAM Bacterial OB fold (BOF) protein
C1P60_RS21675	COG3706	GGDEF domain
C1P60_RS21735	COG3238	Protein conserved in bacteria
C1P60_RS21740	COG1247	-acetyltransferase
C1P60_RS21745	COG2130	NADP-dependent
C1P60_RS21760	COG4772	TonB-dependent receptor
C1P60_RS21765	COG3391	amine dehydrogenase activity
C1P60_RS21770	COG1113	amino acid transport
C1P60_RS21775	COG0625	glutathione transferase activity
C1P60_RS21795	COG3209	COG3209 Rhs family protein
C1P60_RS21820	COG0243	molybdopterin cofactor binding
C1P60_RS21820	COG3383	formate dehydrogenase (NAD+) activity
C1P60_RS21825	COG3383	formate dehydrogenase (NAD+) activity
C1P60_RS21825	COG0243	molybdopterin cofactor binding
C1P60_RS21830	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS21835	COG2864	formate dehydrogenase
C1P60_RS21840	COG3093	addiction module antidote protein HigA
C1P60_RS21865	COG1764	response to oxidative stress
C1P60_RS21870	COG4608	Belongs to the ABC transporter superfamily
C1P60_RS21875	COG0444	Belongs to the ABC transporter superfamily
C1P60_RS21895	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
C1P60_RS21900	COG2202	Pas domain
C1P60_RS21900	COG2200	EAL domain
C1P60_RS21900	COG2199	diguanylate cyclase activity
C1P60_RS21910	COG1649	PFAM Uncharacterised BCR, COG1649
C1P60_RS21915	COG0531	amino acid
C1P60_RS21920	COG0076	glutamate decarboxylase activity
C1P60_RS21925	COG0612	Peptidase, M16
C1P60_RS21930	COG4771	TonB-dependent receptor
C1P60_RS21935	COG4178	(ABC) transporter
C1P60_RS21950	COG2207	Transcriptional regulator
C1P60_RS21960	COG0243	molybdopterin cofactor binding
C1P60_RS21975	COG3550	peptidyl-serine autophosphorylation
C1P60_RS22015	COG0243	molybdopterin cofactor binding
C1P60_RS22030	COG3302	dmso reductase anchor subunit
C1P60_RS22035	COG3381	protein complex oligomerization
C1P60_RS22045	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1P60_RS22050	COG1940	carbohydrate kinase activity
C1P60_RS22055	COG0583	DNA-binding transcription factor activity
C1P60_RS22075	COG3591	Belongs to the peptidase S1B family
C1P60_RS22095	COG0628	permease
C1P60_RS22100	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
C1P60_RS22105	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
C1P60_RS22115	COG0531	amino acid
C1P60_RS22125	COG3136	membrane protein required for alginate biosynthesis
C1P60_RS22130	COG0745	RESPONSE REGULATOR receiver
C1P60_RS22135	COG2205	protein histidine kinase activity
C1P60_RS22145	COG0114	fumarate hydratase activity
C1P60_RS22150	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P60_RS22150	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P60_RS22155	COG1482	cell wall glycoprotein biosynthetic process
C1P60_RS22160	COG5339	Protein conserved in bacteria
C1P60_RS22175	COG3250	beta-galactosidase activity
C1P60_RS22180	COG1309	transcriptional regulator
C1P60_RS22185	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS22190	COG3385	transposase activity
C1P60_RS22195	COG1609	Transcriptional regulator
C1P60_RS22205	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
C1P60_RS22215	COG0673	inositol 2-dehydrogenase activity
C1P60_RS22255	COG4659	FMN binding
C1P60_RS22265	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
C1P60_RS22270	COG3104	oligopeptide transport
C1P60_RS22275	COG0625	glutathione transferase activity
C1P60_RS22280	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
C1P60_RS22300	COG3895	Periplasmic Protein
C1P60_RS22310	COG3133	Outer membrane lipoprotein
C1P60_RS22325	COG1566	PFAM secretion protein HlyD family protein
C1P60_RS22330	COG1289	transmembrane transporter activity
C1P60_RS22340	COG4989	oxidoreductase activity
C1P60_RS22345	COG3313	Fe-S protein
C1P60_RS22350	COG1309	transcriptional regulator
C1P60_RS22355	COG1902	pentaerythritol trinitrate reductase activity
C1P60_RS22360	COG0346	lactoylglutathione lyase activity
C1P60_RS22385	COG4372	Transposase
C1P60_RS22395	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS22405	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
C1P60_RS22410	COG0791	NLP P60 protein
C1P60_RS22415	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C1P60_RS22420	COG2814	Major facilitator Superfamily
C1P60_RS22435	COG0583	DNA-binding transcription factor activity
C1P60_RS22440	COG2814	Major facilitator Superfamily
C1P60_RS22445	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C1P60_RS22450	COG0307	riboflavin synthase, alpha
C1P60_RS22460	COG3468	outer membrane autotransporter barrel domain protein
C1P60_RS22485	COG4372	Transposase
C1P60_RS22490	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS22510	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
C1P60_RS22515	COG0437	4 iron, 4 sulfur cluster binding
C1P60_RS22540	COG0469	pyruvate kinase activity
C1P60_RS22545	COG4238	major outer membrane lipoprotein
C1P60_RS22565	COG0719	Fe-S assembly protein
C1P60_RS22570	COG0396	ATPase activity
C1P60_RS22580	COG0316	Belongs to the HesB IscA family
C1P60_RS22590	COG2050	protein possibly involved in aromatic compounds catabolism
C1P60_RS22595	COG0277	FAD linked oxidase domain protein
C1P60_RS22595	COG0247	lactate metabolic process
C1P60_RS22600	COG0628	permease
C1P60_RS22625	COG2271	Major facilitator Superfamily
C1P60_RS22645	COG1960	acyl-CoA dehydrogenase activity
C1P60_RS22650	COG1917	Cupin 2, conserved barrel domain protein
C1P60_RS22650	COG2207	Transcriptional regulator
C1P60_RS22655	COG2086	electron transfer activity
C1P60_RS22660	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
C1P60_RS22665	COG0644	oxidoreductase
C1P60_RS22670	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C1P60_RS22675	COG0318	PFAM AMP-dependent synthetase and ligase
C1P60_RS22680	COG0574	Belongs to the PEP-utilizing enzyme family
C1P60_RS22680	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P60_RS22695	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C1P60_RS22700	COG4256	Hemin uptake protein
C1P60_RS22715	COG0791	NLP P60 protein
C1P60_RS22725	COG0386	Belongs to the glutathione peroxidase family
C1P60_RS22905	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C1P60_RS23025	COG3137	Salt-induced outer membrane protein
C1P60_RS23030	COG1105	Belongs to the carbohydrate kinase PfkB family
C1P60_RS23040	COG3001	Fructosamine kinase
C1P60_RS23050	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P60_RS23055	COG1988	membrane-bound metal-dependent
C1P60_RS23060	COG1823	symporter activity
C1P60_RS23085	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
C1P60_RS23095	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P60_RS23105	COG0322	excinuclease ABC activity
C1P60_RS23115	COG3678	ATP-independent chaperone mediated protein folding
C1P60_RS23130	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS23155	COG0708	Exodeoxyribonuclease III
C1P60_RS23160	COG0398	Pfam SNARE associated Golgi protein
C1P60_RS23180	COG0398	Pfam SNARE associated Golgi protein
C1P60_RS23185	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P60_RS23190	COG4134	Bacterial extracellular solute-binding protein
C1P60_RS23195	COG4135	transport system, permease component
C1P60_RS23200	COG4136	ATPase activity
C1P60_RS23205	COG2897	thiosulfate sulfurtransferase activity
C1P60_RS23215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C1P60_RS23235	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C1P60_RS23255	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C1P60_RS23260	COG0709	Synthesizes selenophosphate from selenide and ATP
C1P60_RS23265	COG0778	Nitroreductase
C1P60_RS23270	COG0616	signal peptide processing
C1P60_RS23275	COG0252	asparaginase activity
C1P60_RS23280	COG1335	isochorismatase
C1P60_RS23285	COG3139	Protein of unknown function (DUF1315)
C1P60_RS23295	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C1P60_RS23300	COG3385	transposase activity
C1P60_RS23305	COG0676	glucose-6-phosphate 1-epimerase activity
C1P60_RS23310	COG0656	L-ascorbic acid biosynthetic process
C1P60_RS23315	COG3713	MltA-interacting MipA family protein
C1P60_RS23330	COG2199	diguanylate cyclase activity
C1P60_RS23350	COG2199	diguanylate cyclase activity
C1P60_RS23365	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C1P60_RS23385	COG2807	transmembrane transport
C1P60_RS23390	COG3189	MarR family transcriptional regulator
C1P60_RS23395	COG3042	response to heat
C1P60_RS23415	COG2261	transglycosylase associated protein
C1P60_RS23445	COG3385	transposase activity
C1P60_RS23455	COG0473	3-isopropylmalate dehydrogenase activity
C1P60_RS23475	COG4638	Rieske (2fe-2S)
C1P60_RS23480	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P60_RS23485	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
C1P60_RS23490	COG0318	PFAM AMP-dependent synthetase and ligase
C1P60_RS23495	COG3065	identical protein binding
C1P60_RS23500	COG1214	PFAM Peptidase M22, glycoprotease
C1P60_RS23505	COG1199	ATP-dependent helicase activity
C1P60_RS23510	COG0251	oxidation-reduction process
C1P60_RS23530	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C1P60_RS23540	COG1760	l-serine dehydratase
C1P60_RS23545	COG2200	EAL domain
C1P60_RS23555	COG2200	EAL domain
C1P60_RS23560	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS23565	COG1253	flavin adenine dinucleotide binding
C1P60_RS23570	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P60_RS23570	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS23575	COG3715	PTS system
C1P60_RS23580	COG3716	PTS system mannose fructose sorbose family IID component
C1P60_RS23595	COG2226	methyltransferase
C1P60_RS23630	COG1414	Transcriptional regulator
C1P60_RS23635	COG2814	Major facilitator Superfamily
C1P60_RS23645	COG0793	Belongs to the peptidase S41A family
C1P60_RS23655	COG1956	GAF domain-containing protein
C1P60_RS23660	COG2995	paraquat-inducible protein a
C1P60_RS23665	COG3008	intermembrane lipid transfer
C1P60_RS23695	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS23705	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS23735	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
C1P60_RS23745	COG0582	viral genome integration into host DNA
C1P60_RS23755	COG1276	copper resistance
C1P60_RS23760	COG2372	response to copper ion
C1P60_RS23770	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1P60_RS23775	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P60_RS23785	COG2979	Protein of unknown function (DUF533)
C1P60_RS23805	COG0800	Aldolase
C1P60_RS23810	COG0129	dihydroxy-acid dehydratase activity
C1P60_RS23815	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
C1P60_RS23825	COG0469	pyruvate kinase activity
C1P60_RS23880	COG1175	transmembrane transport
C1P60_RS23885	COG2182	Extracellular solute-binding protein
C1P60_RS23895	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C1P60_RS23920	COG3436	PFAM IS66 Orf2 family protein
C1P60_RS23925	COG4372	Transposase
C1P60_RS23935	COG3547	Transposase (IS116 IS110 IS902 family)
C1P60_RS23995	COG1403	HNH endonuclease
C1P60_RS24005	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
C1P60_RS24010	COG4725	Belongs to the MT-A70-like family
C1P60_RS24020	COG1846	Transcriptional regulator
C1P60_RS24040	COG3788	relative of glutathione S-transferase, MAPEG superfamily
C1P60_RS24055	COG0243	molybdopterin cofactor binding
C1P60_RS24060	COG3005	denitrification pathway
C1P60_RS24070	COG3102	Protein conserved in bacteria
C1P60_RS24100	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
C1P60_RS24105	COG0745	RESPONSE REGULATOR receiver
C1P60_RS24115	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
C1P60_RS24120	COG0840	transmembrane signaling receptor activity
C1P60_RS24125	COG0840	transmembrane signaling receptor activity
C1P60_RS24130	COG0835	chemotaxis
C1P60_RS24135	COG0643	Histidine kinase
C1P60_RS24135	COG2198	Histidine kinase
C1P60_RS24225	COG0582	viral genome integration into host DNA
C1P60_RS24230	COG1177	transmembrane transport
C1P60_RS24235	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
C1P60_RS24245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C1P60_RS24255	COG4591	ABC-type transport system involved in lipoprotein release permease component
C1P60_RS24265	COG4591	ABC-type transport system involved in lipoprotein release permease component
C1P60_RS24270	COG4763	Acyl-transferase
C1P60_RS24275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
C1P60_RS24280	COG1376	ErfK ybiS ycfS ynhG family protein
C1P60_RS24280	COG1388	LysM domain
C1P60_RS24290	COG1309	transcriptional regulator
C1P60_RS24295	COG3134	Outer membrane lipoprotein
C1P60_RS24300	COG1252	NADH dehydrogenase
C1P60_RS24325	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
C1P60_RS24330	COG5633	Lipoprotein
C1P60_RS24335	COG0537	adenosine 5'-monophosphoramidase activity
C1P60_RS24340	COG4773	Receptor
C1P60_RS24345	COG1263	PTS System
C1P60_RS24345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P60_RS24350	COG0084	hydrolase, TatD family'
C1P60_RS24355	COG0470	DNA polymerase III
C1P60_RS24365	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
C1P60_RS24370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C1P60_RS24375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1P60_RS24385	COG1028	Short-chain dehydrogenase reductase Sdr
C1P60_RS24390	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
C1P60_RS24410	COG1399	metal-binding, possibly nucleic acid-binding protein
C1P60_RS24415	COG0424	maF-like protein
C1P60_RS24420	COG0564	pseudouridine synthase activity
C1P60_RS24435	COG1530	ribonuclease E activity
C1P60_RS24440	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
C1P60_RS24445	COG1256	bacterial-type flagellum assembly
C1P60_RS24470	COG4787	bacterial-type flagellum-dependent cell motility
C1P60_RS24475	COG1749	Flagellar hook protein flgE
C1P60_RS24480	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
C1P60_RS24485	COG1558	bacterial-type flagellum-dependent cell motility
C1P60_RS24490	COG1815	bacterial-type flagellum-dependent cell motility
C1P60_RS24495	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
C1P60_RS24500	COG2747	anti-sigma28 factor FlgM
C1P60_RS24505	COG3418	PFAM FlgN family protein
C1P60_RS24510	COG0728	peptidoglycan biosynthetic process
C1P60_RS24515	COG0673	inositol 2-dehydrogenase activity
C1P60_RS24525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P60_RS24535	COG2999	glutathione oxidoreductase activity
C1P60_RS24570	COG3038	cytochrome b561
C1P60_RS24575	COG2353	YceI-like domain
C1P60_RS24595	COG1560	Kdo2-lipid A biosynthetic process
C1P60_RS24610	COG5645	(Lipo)protein
C1P60_RS24615	COG3385	transposase activity
C1P60_RS24620	COG2943	transferase activity, transferring hexosyl groups
C1P60_RS24635	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C1P60_RS24640	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
C1P60_RS24685	COG3381	protein complex oligomerization
C1P60_RS24725	COG1702	phosphate starvation-inducible protein PhoH
C1P60_RS24730	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1P60_RS24740	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P60_RS24740	COG0506	proline dehydrogenase activity
C1P60_RS24740	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P60_RS24745	COG1309	transcriptional regulator
C1P60_RS24810	COG0745	RESPONSE REGULATOR receiver
C1P60_RS24820	COG2198	Histidine kinase
C1P60_RS24820	COG0784	Response regulator, receiver
C1P60_RS24820	COG2205	protein histidine kinase activity
C1P60_RS24825	COG0348	domain, Protein
C1P60_RS24840	COG3385	transposase activity
C1P60_RS24855	COG1278	Cold shock
C1P60_RS24860	COG1278	Cold shock
C1P60_RS24880	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P60_RS24885	COG1596	polysaccharide export
C1P60_RS24890	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1P60_RS24895	COG3206	protein involved in exopolysaccharide biosynthesis
C1P60_RS24895	COG0489	protein tyrosine kinase activity
C1P60_RS24910	COG1294	oxidase, subunit
C1P60_RS24915	COG1271	oxidase subunit
C1P60_RS24920	COG1773	rubredoxin
C1P60_RS24925	COG1999	signal sequence binding
C1P60_RS24930	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P60_RS24935	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
C1P60_RS24940	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
C1P60_RS24945	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
C1P60_RS24955	COG0670	Belongs to the BI1 family
C1P60_RS24960	COG2920	part of a sulfur-relay system
C1P60_RS24965	COG1254	Belongs to the acylphosphatase family
C1P60_RS24980	COG1832	CoA-binding protein
C1P60_RS24995	COG0210	DNA helicase
C1P60_RS25000	COG3304	Inner membrane component domain
C1P60_RS25005	COG1289	transmembrane transporter activity
C1P60_RS25030	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C1P60_RS25030	COG2885	chlorophyll binding
C1P60_RS25040	COG1067	ATP-dependent peptidase activity