SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 SUPERFAMILY SSF64182 48 465 1.09E-116 T 21-04-2016 SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 PANTHER PTHR30255 2 576 1.2E-229 T 21-04-2016 SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 PANTHER PTHR30255:SF2 2 576 1.2E-229 T 21-04-2016 SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 Pfam PF02272 DHHA1 domain 382 449 1.7E-15 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 3.2E-169 T 21-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SDY_3190 19eae05f775328fe33054eb2a1ddb4f7 577 Pfam PF01368 DHH family 74 211 5.4E-11 T 21-04-2016 IPR001667 DDH domain SDY_1494 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1494 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1494 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1494 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1494 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0096 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0096 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0096 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0096 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0096 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1297 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1297 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1297 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1297 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1297 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4618 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4618 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4618 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4618 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4618 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3811 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3811 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3811 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3811 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3811 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2963 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2963 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2963 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2963 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2963 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4029 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4029 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4029 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4029 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4029 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1336 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1336 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1336 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1336 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1336 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3280 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3280 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3280 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3280 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3280 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2466 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2466 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2466 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2466 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2466 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1430 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1430 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1430 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1430 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1430 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3540 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3540 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3540 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3540 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3540 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2445 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2445 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2445 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2445 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2445 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2871 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2871 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2871 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2871 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2871 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3322 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3322 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3322 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3322 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3322 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1591 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1591 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1591 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1591 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1591 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4234 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4234 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4234 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4234 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4234 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0043 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0043 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0043 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0043 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0043 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0024 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0024 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0024 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0024 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0024 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0888 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0888 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0888 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0888 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0888 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1501 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1501 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1501 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1501 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1501 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3194 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3194 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3194 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3194 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3194 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1347 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1347 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1347 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1347 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1347 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0085 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0085 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0085 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0085 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0085 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0993 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0993 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0993 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0993 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0993 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4407 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4407 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4407 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4407 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4407 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3072 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3072 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3072 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3072 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3072 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1412 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1412 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1412 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1412 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1412 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4536 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4536 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4536 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4536 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4536 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1439 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1439 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1439 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1439 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1439 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0543 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0543 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0543 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0543 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0543 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3225 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3225 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3225 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3225 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3225 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1323 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1323 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1323 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1323 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1323 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4095 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4095 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4095 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4095 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4095 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1381 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1381 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1381 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1381 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1381 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4387 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4387 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4387 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4387 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4387 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4245 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4245 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4245 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4245 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4245 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1620 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1620 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1620 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1620 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1620 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0150 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0150 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0150 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0150 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0150 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3854 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3854 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3854 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3854 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3854 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3609 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3609 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3609 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3609 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3609 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4501 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4501 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4501 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4501 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4501 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4104 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4104 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4104 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4104 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4104 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0237 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0237 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0237 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0237 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0237 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3928 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3928 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3928 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3928 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3928 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4513 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4513 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4513 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4513 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4513 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0466 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0466 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0466 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0466 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0466 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0517 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0517 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0517 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0517 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0517 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2956 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2956 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2956 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2956 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2956 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3925 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3925 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3925 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3925 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3925 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3828 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3828 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3828 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3828 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3828 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4139 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4139 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4139 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4139 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4139 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3315 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3315 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3315 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3315 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3315 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1906 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1906 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1906 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1906 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1906 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1823 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1823 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1823 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1823 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1823 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2850 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2850 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2850 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2850 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2850 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4374 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4374 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4374 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4374 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4374 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0657 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0657 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0657 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0657 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0657 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0282 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0282 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0282 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0282 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0282 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4558 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4558 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4558 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4558 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4558 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2568 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2568 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2568 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2568 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2568 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3868 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3868 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3868 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3868 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3868 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4321 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4321 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4321 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4321 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4321 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0668 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0668 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0668 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0668 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0668 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3295 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3295 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3295 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3295 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3295 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0670 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0670 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0670 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0670 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0670 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4338 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4338 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4338 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4338 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4338 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2289 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2289 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2289 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2289 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2289 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3884 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3884 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3884 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3884 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3884 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1482 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1482 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1482 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1482 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1482 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4438 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4438 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4438 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4438 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4438 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2554 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2554 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2554 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2554 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2554 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4272 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4272 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4272 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4272 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4272 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0570 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0570 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0570 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0570 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0570 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1156 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1156 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1156 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1156 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1156 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0273 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0273 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0273 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0273 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0273 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1771 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1771 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1771 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1771 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1771 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3584 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3584 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3584 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3584 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3584 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3231 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3231 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3231 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3231 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3231 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4332 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4332 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4332 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4332 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4332 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1056 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1056 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1056 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1056 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1056 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4193 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4193 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4193 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4193 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4193 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0394 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0394 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0394 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0394 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0394 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0401 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0401 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0401 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0401 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0401 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2935 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2935 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2935 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2935 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2935 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1469 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1469 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1469 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1469 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1469 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2251 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2251 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2251 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2251 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2251 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1753 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1753 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1753 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1753 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1753 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0202 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0202 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0202 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0202 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0202 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1721 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1721 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1721 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1721 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1721 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2136 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2136 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2136 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2136 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2136 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3444 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3444 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3444 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3444 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3444 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1396 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1396 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1396 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1396 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1396 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2549 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2549 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2549 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2549 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2549 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1745 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1745 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1745 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1745 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1745 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4164 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4164 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4164 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4164 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4164 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0430 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0430 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0430 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0430 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0430 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1364 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1364 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1364 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1364 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1364 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1360 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1360 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1360 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1360 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1360 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1214 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1214 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1214 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1214 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1214 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2994 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2994 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2994 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2994 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2994 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0375 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0375 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0375 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0375 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0375 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0734 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0734 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0734 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0734 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0734 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0475 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0475 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0475 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0475 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0475 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2540 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2540 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2540 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2540 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2540 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3644 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3644 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3644 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3644 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3644 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3104 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3104 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3104 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3104 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3104 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1267 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1267 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1267 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1267 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1267 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0257 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0257 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0257 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0257 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0257 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0031 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0031 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0031 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0031 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0031 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1958 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1958 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1958 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1958 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1958 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0499 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_0499 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0499 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0499 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0499 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4108 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4108 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4108 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4108 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4108 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4215 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4215 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4215 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4215 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4215 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1164 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1164 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1164 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1164 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1164 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1544 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1544 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1544 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1544 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1544 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1714 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1714 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1714 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1714 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1714 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2307 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_2307 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2307 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2307 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2307 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1094 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1094 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1094 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1094 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1094 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1479 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1479 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1479 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1479 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1479 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1293 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1293 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1293 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1293 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1293 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1934 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1934 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1934 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1934 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1934 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3628 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_3628 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3628 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3628 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3628 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1199 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_1199 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1199 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1199 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1199 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4483 a58409f058031541dfe23aacc0983ed9 91 PANTHER PTHR33293 2 91 8.7E-34 T 21-04-2016 SDY_4483 a58409f058031541dfe23aacc0983ed9 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4483 a58409f058031541dfe23aacc0983ed9 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4483 a58409f058031541dfe23aacc0983ed9 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4483 a58409f058031541dfe23aacc0983ed9 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1978 4fffe865878617820231a428f644009a 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 6.1E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_1978 4fffe865878617820231a428f644009a 682 SMART SM00228 246 323 5.3E-10 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_1978 4fffe865878617820231a428f644009a 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 2.0E-39 T 21-04-2016 IPR020992 Tail specific protease, C-terminal SDY_1978 4fffe865878617820231a428f644009a 682 Gene3D G3DSA:2.30.42.10 252 334 6.7E-23 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_1978 4fffe865878617820231a428f644009a 682 SUPERFAMILY SSF52096 194 264 2.49E-68 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1978 4fffe865878617820231a428f644009a 682 SUPERFAMILY SSF52096 350 537 2.49E-68 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1978 4fffe865878617820231a428f644009a 682 SUPERFAMILY SSF50156 219 345 4.63E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_1978 4fffe865878617820231a428f644009a 682 SMART SM00245 326 531 3.6E-82 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SDY_1978 4fffe865878617820231a428f644009a 682 PANTHER PTHR32060 1 604 0.0 T 21-04-2016 SDY_1978 4fffe865878617820231a428f644009a 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 5.4E-131 T 21-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SDY_1978 4fffe865878617820231a428f644009a 682 Pfam PF03572 Peptidase family S41 356 529 2.2E-53 T 21-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SDY_1978 4fffe865878617820231a428f644009a 682 Gene3D G3DSA:3.90.226.10 335 533 1.4E-67 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1978 4fffe865878617820231a428f644009a 682 Gene3D G3DSA:3.90.226.10 646 675 1.4E-67 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1978 4fffe865878617820231a428f644009a 682 Gene3D G3DSA:3.30.750.44 199 251 7.3E-4 T 21-04-2016 SDY_1978 4fffe865878617820231a428f644009a 682 PANTHER PTHR32060:SF11 1 604 0.0 T 21-04-2016 SDY_2947 bee8a9d02e03015c15fe1ba853b07055 103 PANTHER PTHR37485 2 103 1.4E-50 T 21-04-2016 SDY_2947 bee8a9d02e03015c15fe1ba853b07055 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.875 T 21-04-2016 IPR023081 Cell division protein FtsB SDY_2947 bee8a9d02e03015c15fe1ba853b07055 103 Pfam PF04977 Septum formation initiator 11 89 4.1E-30 T 21-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SDY_2947 bee8a9d02e03015c15fe1ba853b07055 103 PANTHER PTHR37485:SF1 2 103 1.4E-50 T 21-04-2016 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 SUPERFAMILY SSF103515 568 864 4.45E-51 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 751 774 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 732 749 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 641 665 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 580 598 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 780 801 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 600 620 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PRINTS PR01484 Pertactin virulence factor family signature 844 864 2.9E-15 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 169 220 7.0E-9 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 234 294 1.7E-19 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 104 166 5.8E-20 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 48 92 1.9E-6 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PANTHER PTHR12338:SF7 22 864 0.0 T 21-04-2016 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF03212 Pertactin 405 523 3.2E-45 T 21-04-2016 IPR004899 Pertactin, central region SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 SUPERFAMILY SSF51126 241 524 2.35E-30 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 427 864 1.5E-98 T 21-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Gene3D G3DSA:2.160.20.20 24 542 1.5E-62 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 249 278 1.1E-4 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 157 189 9.7E-8 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 SMART SM00869 600 853 1.5E-43 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 PANTHER PTHR12338 22 864 0.0 T 21-04-2016 SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Pfam PF03797 Autotransporter beta-domain 598 848 3.9E-49 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_1204 ce311b1d5020f01a83ed4f99af46f7e6 864 Gene3D G3DSA:2.40.128.130 546 864 9.0E-79 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_3588 f4a6803a27766f39277835db390a8cd3 175 PANTHER PTHR11603:SF154 1 173 1.2E-149 T 21-04-2016 SDY_3588 f4a6803a27766f39277835db390a8cd3 175 PANTHER PTHR11603 1 173 1.2E-149 T 21-04-2016 SDY_3588 f4a6803a27766f39277835db390a8cd3 175 Pfam PF01202 Shikimate kinase 17 171 2.5E-12 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3588 f4a6803a27766f39277835db390a8cd3 175 SUPERFAMILY SSF52540 4 172 7.11E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3588 f4a6803a27766f39277835db390a8cd3 175 Gene3D G3DSA:3.40.50.300 4 172 8.9E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3588 f4a6803a27766f39277835db390a8cd3 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 173 8.4E-73 T 21-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 SDY_1690 4162ad80e539529228fbdcae0c8ac720 122 PANTHER PTHR36849 7 122 1.6E-58 T 21-04-2016 SDY_1690 4162ad80e539529228fbdcae0c8ac720 122 Pfam PF04343 Protein of unknown function, DUF488 12 119 2.4E-32 T 21-04-2016 IPR007438 Protein of unknown function DUF488 SDY_1690 4162ad80e539529228fbdcae0c8ac720 122 PANTHER PTHR36849:SF1 7 122 1.6E-58 T 21-04-2016 SDY_2961 94db7832062f3b1e87c4678f0511369b 270 Pfam PF13276 HTH-like domain 5 47 4.6E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_2961 94db7832062f3b1e87c4678f0511369b 270 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2961 94db7832062f3b1e87c4678f0511369b 270 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_2961 94db7832062f3b1e87c4678f0511369b 270 SUPERFAMILY SSF53098 65 229 1.82E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2961 94db7832062f3b1e87c4678f0511369b 270 Pfam PF00665 Integrase core domain 72 186 2.8E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 Gene3D G3DSA:3.90.80.10 5 175 4.4E-62 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.1E-54 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 PANTHER PTHR10286 5 175 8.1E-80 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.626 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_4462 108cc7936765946bc5b79ea261151b2d 176 SUPERFAMILY SSF50324 4 174 9.81E-68 T 21-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 PANTHER PTHR26402:SF555 7 209 9.8E-138 T 21-04-2016 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00448 7 120 3.8E-37 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.4E-22 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF52172 6 135 1.42E-36 T 21-04-2016 IPR011006 CheY-like superfamily SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:3.40.50.2300 5 154 5.4E-41 T 21-04-2016 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00072 Response regulator receiver domain 9 120 8.2E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 PANTHER PTHR26402 7 209 9.8E-138 T 21-04-2016 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF46894 146 213 1.36E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:1.10.10.10 155 214 1.2E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1275 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00421 153 210 1.0E-25 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 21-04-2016 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-30 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.2E-65 T 21-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 PANTHER PTHR11661 1 142 1.6E-75 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:3.30.1550.10 2 72 9.8E-38 T 21-04-2016 IPR020784 Ribosomal protein L11, N-terminal SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 21-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.1E-24 T 21-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3745 8db149aa24ca533fb58ad37447a8e174 142 SMART SM00649 9 141 4.6E-84 T 21-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 Gene3D G3DSA:3.40.50.720 414 548 1.4E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 PANTHER PTHR16254:SF17 1 551 0.0 T 21-04-2016 SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 SUPERFAMILY SSF51735 418 549 1.32E-29 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 PANTHER PTHR16254 1 551 0.0 T 21-04-2016 SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.2E-76 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 6.9E-77 T 21-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SDY_0441 230fe365cdfbf25329140bd24cb9558b 558 Pfam PF02254 TrkA-N domain 421 534 2.0E-25 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-149 T 21-04-2016 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 PANTHER PTHR20919:SF0 2 309 1.4E-163 T 21-04-2016 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.481 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 PANTHER PTHR20919 2 309 1.4E-163 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 7.1E-169 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.3E-131 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 Gene3D G3DSA:3.40.50.880 34 301 3.1E-122 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 PIRSF PIRSF000450 1 308 3.8E-148 T 21-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SDY_4330 aaf0e06f6bfe6c5512005a61f18a8af2 309 SUPERFAMILY SSF52317 17 297 3.71E-100 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 21-04-2016 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 21-04-2016 IPR004087 K Homology domain GO:0003676 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760:SF19 2 233 1.3E-149 T 21-04-2016 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 21-04-2016 IPR018280 Ribosomal protein S3, conserved site SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 9.5E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 21-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 21-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760 2 233 1.3E-149 T 21-04-2016 SDY_3490 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 21-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Gene3D G3DSA:3.40.47.10 15 134 2.7E-49 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Gene3D G3DSA:3.40.47.10 221 299 2.7E-49 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 21-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 PANTHER PTHR18919 10 436 8.0E-195 T 21-04-2016 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 8.5E-59 T 21-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 PIRSF PIRSF000429 9 436 7.0E-124 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 21-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 1.9E-36 T 21-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 SUPERFAMILY SSF53901 15 295 1.43E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 74.551 T 21-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.9E-133 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 SUPERFAMILY SSF53901 297 434 4.17E-32 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 PANTHER PTHR18919:SF5 10 436 8.0E-195 T 21-04-2016 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Gene3D G3DSA:3.40.47.10 302 435 1.5E-48 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 Gene3D G3DSA:3.40.47.10 175 220 1.5E-48 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2543 b9cf16ad7e4a932e514e298ee84aaedc 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 4.9E-269 T 21-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 SUPERFAMILY SSF51161 2 262 7.54E-81 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.0E-113 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.7E-8 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.0E-9 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 PANTHER PTHR23416 1 254 2.8E-144 T 21-04-2016 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.046 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:1.20.1180.10 197 262 6.1E-28 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 PIRSF PIRSF000456 5 262 1.5E-107 T 21-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:2.160.10.10 4 194 5.4E-51 T 21-04-2016 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 PANTHER PTHR23416:SF8 1 254 2.8E-144 T 21-04-2016 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0197 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.5E-29 T 21-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SDY_2419 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2419 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_2419 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2419 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0585 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0585 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_0585 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0585 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1785 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1785 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_1785 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1785 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0931 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0931 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_0931 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0931 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2361 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2361 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_2361 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2361 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0723 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0723 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_0723 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0723 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0849 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0849 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_0849 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0849 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4341 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4341 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_4341 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4341 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0868 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0868 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_0868 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0868 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3195 7ebc979a0f0ead6b307daf7d818e62d5 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3195 7ebc979a0f0ead6b307daf7d818e62d5 100 PANTHER PTHR33215 3 100 3.5E-20 T 21-04-2016 SDY_3195 7ebc979a0f0ead6b307daf7d818e62d5 100 SUPERFAMILY SSF46689 4 94 7.17E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3195 7ebc979a0f0ead6b307daf7d818e62d5 100 Gene3D G3DSA:1.10.10.60 9 90 6.0E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3966 e130092e41361244e8362f098cdd0a85 419 SMART SM00959 5 47 6.9E-18 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SDY_3966 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184:SF34 160 416 1.9E-199 T 21-04-2016 SDY_3966 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184:SF34 19 141 1.9E-199 T 21-04-2016 SDY_3966 e130092e41361244e8362f098cdd0a85 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.2E-223 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:3.40.50.300 132 418 2.7E-106 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3966 e130092e41361244e8362f098cdd0a85 419 SMART SM00357 52 118 9.6E-19 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.3E-17 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SDY_3966 e130092e41361244e8362f098cdd0a85 419 SMART SM00382 170 355 5.0E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3966 e130092e41361244e8362f098cdd0a85 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.259 T 21-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SDY_3966 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF52540 90 371 1.49E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3966 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184 160 416 1.9E-199 T 21-04-2016 SDY_3966 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184 19 141 1.9E-199 T 21-04-2016 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-22 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.6E-32 T 21-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:1.10.720.10 1 47 1.4E-22 T 21-04-2016 SDY_3966 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 21-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SDY_3966 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3966 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 PRINTS PR01438 Universal stress protein signature 120 142 1.9E-14 T 21-04-2016 IPR006015 Universal stress protein A SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-14 T 21-04-2016 IPR006015 Universal stress protein A SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 PRINTS PR01438 Universal stress protein signature 103 115 1.9E-14 T 21-04-2016 IPR006015 Universal stress protein A SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 PANTHER PTHR31964 1 142 1.0E-101 T 21-04-2016 SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 Gene3D G3DSA:3.40.50.620 2 142 2.7E-29 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 PANTHER PTHR31964:SF48 1 142 1.0E-101 T 21-04-2016 SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 Pfam PF00582 Universal stress protein family 1 142 1.1E-27 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_0542 b68986c8c5488d7fd0405968ee0758aa 142 SUPERFAMILY SSF52402 1 142 3.6E-27 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 PANTHER PTHR33619:SF3 1 377 2.4E-94 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 PANTHER PTHR33619 1 377 2.4E-94 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Gene3D G3DSA:1.20.5.70 345 379 4.2E-19 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Gene3D G3DSA:3.30.1950.10 90 164 1.9E-32 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 3.4E-27 T 21-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Gene3D G3DSA:3.10.560.10 245 344 1.7E-34 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Gene3D G3DSA:3.10.560.10 165 244 1.3E-28 T 21-04-2016 SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Pfam PF10531 SLBB domain 256 305 9.9E-5 T 21-04-2016 IPR019554 Soluble ligand binding domain SDY_0959 d2f6d78de260ce18ce0eebec0dec8b6b 379 Pfam PF10531 SLBB domain 173 220 1.5E-8 T 21-04-2016 IPR019554 Soluble ligand binding domain SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 3.6E-96 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.3E-62 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.21 T 21-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 PANTHER PTHR10196 1 502 6.1E-275 T 21-04-2016 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 SUPERFAMILY SSF53067 256 498 1.73E-87 T 21-04-2016 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 Gene3D G3DSA:3.30.420.40 2 254 1.7E-108 T 21-04-2016 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 PANTHER PTHR10196:SF9 1 502 6.1E-275 T 21-04-2016 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 SUPERFAMILY SSF53067 5 256 3.61E-96 T 21-04-2016 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 PIRSF PIRSF000538 4 502 5.5E-178 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.4E-231 T 21-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3818 2e791a7095f52c740ff9440e463cbbe0 502 Gene3D G3DSA:3.30.420.40 256 498 4.5E-105 T 21-04-2016 SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 Pfam PF00106 short chain dehydrogenase 2 187 5.0E-54 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 Gene3D G3DSA:3.40.50.720 2 232 2.1E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 SUPERFAMILY SSF51735 2 231 3.7E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PANTHER PTHR24322 5 131 2.6E-97 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PANTHER PTHR24322 147 179 2.6E-97 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.5E-20 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-20 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.5E-20 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.5E-20 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-20 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PANTHER PTHR24322:SF392 5 131 2.6E-97 T 21-04-2016 SDY_1586 10aaf0c683e37ad929e363f1d7471787 248 PANTHER PTHR24322:SF392 147 179 2.6E-97 T 21-04-2016 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PANTHER PTHR39083 482 779 3.6E-207 T 21-04-2016 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PANTHER PTHR39083 32 466 3.6E-207 T 21-04-2016 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 232 255 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 529 548 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 396 417 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 100 121 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 190 211 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 313 334 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PRINTS PR01440 Cellulose synthase subunit B signature 566 586 1.835261E-32 T 21-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 Pfam PF03170 Bacterial cellulose synthase subunit 71 680 1.2E-219 T 21-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PANTHER PTHR39083:SF1 482 779 3.6E-207 T 21-04-2016 SDY_4552 1930cff394645dbb5da56dd49d25110d 779 PANTHER PTHR39083:SF1 32 466 3.6E-207 T 21-04-2016 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 39 241 67.795 T 21-04-2016 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 SUPERFAMILY SSF53955 75 232 9.57E-26 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 Pfam PF01464 Transglycosylase SLT domain 81 206 3.1E-28 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 98 126 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 Gene3D G3DSA:1.10.530.10 72 236 2.5E-29 T 21-04-2016 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 PANTHER PTHR21666:SF216 60 241 1.2E-120 T 21-04-2016 SDY_1231 d5320d826ac96068cbae8ef76ffad688 241 PANTHER PTHR21666 60 241 1.2E-120 T 21-04-2016 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 PANTHER PTHR30055:SF19 1 179 3.7E-56 T 21-04-2016 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-11 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-11 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF46689 1 79 1.8E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 Gene3D G3DSA:1.10.357.10 5 192 1.7E-35 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF48498 84 168 9.93E-12 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 PANTHER PTHR30055 1 179 3.7E-56 T 21-04-2016 SDY_1837 b2c1e30af19fa40e5767bc8668149a38 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.1E-18 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_3539 19349f690b43752c16ed6785354c51fd 175 Gene3D G3DSA:1.10.10.10 108 169 2.2E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3539 19349f690b43752c16ed6785354c51fd 175 SUPERFAMILY SSF46894 109 169 1.5E-7 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_3539 19349f690b43752c16ed6785354c51fd 175 Pfam PF00196 Bacterial regulatory proteins, luxR family 117 167 1.3E-5 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3539 19349f690b43752c16ed6785354c51fd 175 Gene3D G3DSA:3.20.20.150 21 71 1.5E-10 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 PANTHER PTHR10887 152 319 1.7E-93 T 21-04-2016 SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 1.0E-14 T 21-04-2016 IPR027785 UvrD-like helicase C-terminal domain SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 SMART SM00382 163 320 0.008 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 15 604 57.218 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Gene3D G3DSA:3.40.50.300 525 584 6.6E-12 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 1.7E-197 T 21-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 SUPERFAMILY SSF52540 281 378 1.29E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 SUPERFAMILY SSF52540 434 602 1.29E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 SUPERFAMILY SSF52540 6 360 2.75E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 PANTHER PTHR10887:SF351 152 319 1.7E-93 T 21-04-2016 SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Pfam PF13604 AAA domain 155 318 1.7E-32 T 21-04-2016 SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Gene3D G3DSA:3.40.50.300 112 318 5.1E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3036 46cace8cfb8fa75338fb4c029da057f1 608 Gene3D G3DSA:3.40.50.300 350 382 5.1E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 Gene3D G3DSA:3.40.630.30 294 440 2.5E-40 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 Pfam PF00583 Acetyltransferase (GNAT) family 342 414 2.4E-7 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 233.657 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 PANTHER PTHR30602:SF3 1 442 0.0 T 21-04-2016 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 8.2E-197 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 SUPERFAMILY SSF53633 6 291 1.82E-69 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 Gene3D G3DSA:3.40.1160.10 24 291 2.7E-69 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 SUPERFAMILY SSF55729 256 418 2.27E-18 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 PIRSF PIRSF000423 1 442 2.2E-209 T 21-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 PANTHER PTHR30602 1 442 0.0 T 21-04-2016 SDY_3035 0e7552fa94dc438175c4ca86400fc3ba 443 Pfam PF00696 Amino acid kinase family 26 268 1.8E-32 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 SUPERFAMILY SSF48498 89 190 1.08E-13 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 Gene3D G3DSA:1.10.357.10 81 192 7.6E-13 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 Gene3D G3DSA:1.10.10.60 9 72 3.2E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 PANTHER PTHR30055:SF88 4 195 1.8E-119 T 21-04-2016 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 PANTHER PTHR30055 4 195 1.8E-119 T 21-04-2016 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 SUPERFAMILY SSF46689 9 89 5.49E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4269 6f5d2de563be6173073c4a45672dda5a 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 2.7E-12 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_3458 590f8829e167563339dd23da319f5983 272 SUPERFAMILY SSF51735 102 269 1.15E-46 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3458 590f8829e167563339dd23da319f5983 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 1.2E-9 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SDY_3458 590f8829e167563339dd23da319f5983 272 Gene3D G3DSA:3.40.192.10 2 107 4.5E-38 T 21-04-2016 SDY_3458 590f8829e167563339dd23da319f5983 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 7.0E-111 T 21-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3458 590f8829e167563339dd23da319f5983 272 Gene3D G3DSA:3.40.50.720 108 244 9.8E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3458 590f8829e167563339dd23da319f5983 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 33.18 T 21-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3458 590f8829e167563339dd23da319f5983 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.3E-23 T 21-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3458 590f8829e167563339dd23da319f5983 272 PANTHER PTHR21089:SF2 1 270 8.2E-161 T 21-04-2016 SDY_3458 590f8829e167563339dd23da319f5983 272 SUPERFAMILY SSF53223 2 101 1.61E-32 T 21-04-2016 SDY_3458 590f8829e167563339dd23da319f5983 272 PANTHER PTHR21089 1 270 8.2E-161 T 21-04-2016 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 SUPERFAMILY SSF54211 252 342 1.39E-32 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Gene3D G3DSA:3.30.230.40 258 355 5.5E-32 T 21-04-2016 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 5.1E-65 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Gene3D G3DSA:3.30.230.40 171 253 1.5E-38 T 21-04-2016 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 PANTHER PTHR23133:SF2 10 97 1.5E-187 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 PANTHER PTHR23133:SF2 163 355 1.5E-187 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 8.6E-83 T 21-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 58.153 T 21-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 PANTHER PTHR23133 10 97 1.5E-187 T 21-04-2016 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 PANTHER PTHR23133 163 355 1.5E-187 T 21-04-2016 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 145 5.4E-26 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 SUPERFAMILY SSF54211 167 251 6.7E-32 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 8 134 4.3E-6 T 21-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 21-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.777 T 21-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 SUPERFAMILY SSF56784 1 156 6.51E-40 T 21-04-2016 IPR023214 HAD-like domain SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 4.0E-46 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SDY_2219 b6b94f3cff329a8252e5e354b8cc05a2 355 Gene3D G3DSA:3.40.50.1000 1 170 4.6E-42 T 21-04-2016 IPR023214 HAD-like domain SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 PANTHER PTHR30294 1 368 0.0 T 21-04-2016 SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 Pfam PF12698 ABC-2 family transporter protein 25 358 7.1E-49 T 21-04-2016 SDY_0811 c652370d64ed50cd5041f900e24a46ed 368 PANTHER PTHR30294:SF15 1 368 0.0 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.7E-41 T 21-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 249 366 4.9E-39 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 1 121 1.3E-32 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 1 121 5.84E-26 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 125 244 5.5E-30 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 122 248 1.2E-38 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 PANTHER PTHR30478 2 366 1.1E-152 T 21-04-2016 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 SMART SM00480 17 362 8.4E-176 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-41 T 21-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-45 T 21-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 PIRSF PIRSF000804 1 366 7.2E-119 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-114 T 21-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4183 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 245 366 6.77E-38 T 21-04-2016 SDY_1920 600865687a642257996c1ac6ee25e12a 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1920 600865687a642257996c1ac6ee25e12a 100 PANTHER PTHR33215 3 100 2.5E-18 T 21-04-2016 SDY_1920 600865687a642257996c1ac6ee25e12a 100 SUPERFAMILY SSF46689 4 94 1.42E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1920 600865687a642257996c1ac6ee25e12a 100 Gene3D G3DSA:1.10.10.60 9 89 1.1E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2987 600865687a642257996c1ac6ee25e12a 100 Pfam PF01527 Transposase 3 74 2.1E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2987 600865687a642257996c1ac6ee25e12a 100 PANTHER PTHR33215 3 100 2.5E-18 T 21-04-2016 SDY_2987 600865687a642257996c1ac6ee25e12a 100 SUPERFAMILY SSF46689 4 94 1.42E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2987 600865687a642257996c1ac6ee25e12a 100 Gene3D G3DSA:1.10.10.60 9 89 1.1E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PIRSF PIRSF000350 1 468 2.9E-87 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 SUPERFAMILY SSF55424 343 466 1.07E-38 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-69 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 5.2E-151 T 21-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PANTHER PTHR22912 1 459 5.4E-275 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.7E-63 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 SUPERFAMILY SSF51905 2 338 6.17E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Gene3D G3DSA:3.30.390.30 336 462 2.4E-44 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 PANTHER PTHR22912:SF160 1 459 5.4E-275 T 21-04-2016 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 4.2E-35 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Gene3D G3DSA:3.50.50.60 152 271 7.6E-36 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Gene3D G3DSA:3.50.50.60 272 335 3.6E-68 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0146 56a3ce511395aa0faf1920a577bc27e6 474 Gene3D G3DSA:3.50.50.60 6 149 3.6E-68 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4648 2dcd53ec791bc71fda51f36648b55184 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 3.4E-67 T 21-04-2016 IPR019305 Uncharacterised protein family Smp SDY_2469 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2469 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2469 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3166 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3166 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3166 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1185 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1185 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1185 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3823 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3823 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3823 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4243 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4243 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4243 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4464 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4464 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4464 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4623 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4623 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4623 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0965 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0965 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0965 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3799 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3799 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3799 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4384 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4384 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4384 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0084 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0084 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0084 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4435 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4435 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4435 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3317 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3317 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3317 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4167 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4167 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4167 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4559 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4559 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4559 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1442 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1442 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1442 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1115 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1115 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1115 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1473 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1473 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1473 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3809 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3809 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3809 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0427 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0427 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0427 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1176 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1176 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1176 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1216 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1216 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1216 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1174 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1174 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1174 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1843 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1843 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1843 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1208 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1208 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1208 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0538 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0538 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0538 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3182 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3182 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3182 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2360 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2360 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2360 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1407 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1407 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1407 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4135 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4135 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4135 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1704 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1704 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1704 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2693 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2693 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2693 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0177 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0177 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0177 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4489 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4489 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4489 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0157 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0157 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0157 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2238 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2238 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2238 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2739 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2739 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2739 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2267 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2267 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2267 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1083 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1083 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1083 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0022 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0022 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0022 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3639 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3639 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3639 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4325 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4325 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4325 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1296 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1296 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1296 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0242 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0242 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0242 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4388 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4388 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4388 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1371 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1371 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1371 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3019 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3019 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3019 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1405 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1405 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1405 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0301 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0886 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0886 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0886 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1680 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_1680 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_1680 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2847 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2847 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2847 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4446 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4446 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4446 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4235 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4235 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4235 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2175 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2175 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2175 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4281 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4281 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4281 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0152 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0152 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0152 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4279 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4279 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4279 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4604 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4604 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4604 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4223 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4223 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4223 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4422 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4422 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4422 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2986 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2986 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2986 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2232 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2232 d8c362d6cb7643f06fd6e88d75ad1c5b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2232 d8c362d6cb7643f06fd6e88d75ad1c5b 131 Pfam PF03400 IS1 transposase 2 131 7.0E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 PANTHER PTHR11082 1 320 1.4E-152 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 PANTHER PTHR11082:SF25 1 320 1.4E-152 T 21-04-2016 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:1.10.1200.80 252 319 2.6E-17 T 21-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 SUPERFAMILY SSF51395 10 319 1.83E-87 T 21-04-2016 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 5.2E-143 T 21-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 PIRSF PIRSF006621 1 321 1.6E-99 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:3.20.20.70 7 244 7.4E-82 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.407 T 21-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 SDY_3437 b4444db13d93a430c75b1f22d9459e45 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 6.5E-117 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 PANTHER PTHR11938 149 181 5.1E-33 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 PANTHER PTHR11938 13 114 5.1E-33 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Pfam PF00037 4Fe-4S binding domain 89 111 3.7E-9 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Pfam PF12800 4Fe-4S binding domain 24 36 0.057 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Gene3D G3DSA:3.30.70.20 77 101 1.2E-17 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Pfam PF12798 4Fe-4S binding domain 64 80 0.0082 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Gene3D G3DSA:3.30.70.20 102 114 2.3E-15 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Gene3D G3DSA:3.30.70.20 24 76 1.9E-9 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 Gene3D G3DSA:3.30.70.20 150 196 2.3E-15 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 SUPERFAMILY SSF54862 152 198 4.37E-37 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 SUPERFAMILY SSF54862 14 114 4.37E-37 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 PANTHER PTHR11938:SF111 149 181 5.1E-33 T 21-04-2016 SDY_2670 e58e86e53dc9d3806b006dd41942e556 218 PANTHER PTHR11938:SF111 13 114 5.1E-33 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Gene3D G3DSA:3.90.199.10 330 395 4.9E-105 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Gene3D G3DSA:3.90.199.10 27 234 4.9E-105 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 SUPERFAMILY SSF56719 28 479 2.35E-153 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Gene3D G3DSA:2.120.10.90 493 726 3.4E-27 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.295 T 21-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 1.1E-133 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 PANTHER PTHR10169 6 520 0.0 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 PANTHER PTHR10169:SF30 6 520 0.0 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Gene3D G3DSA:3.30.1360.40 235 328 8.1E-25 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 SMART SM00434 8 458 3.4E-240 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 SUPERFAMILY SSF101904 494 736 1.96E-50 T 21-04-2016 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 5.3E-4 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_3218 5051c9981abb5a9c06a7ad067ac8ac44 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.8E-8 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Pfam PF02780 Transketolase, C-terminal domain 495 610 2.9E-27 T 21-04-2016 IPR033248 Transketolase, C-terminal domain SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.622 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 SUPERFAMILY SSF52518 10 199 3.76E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 SUPERFAMILY SSF52518 243 381 3.76E-75 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 PANTHER PTHR11624 24 218 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 PANTHER PTHR11624 241 619 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Gene3D G3DSA:3.40.50.970 26 201 3.5E-74 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Gene3D G3DSA:3.40.50.970 242 334 3.5E-74 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 PANTHER PTHR11624:SF20 24 218 0.0 T 21-04-2016 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 PANTHER PTHR11624:SF20 241 619 0.0 T 21-04-2016 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 SMART SM00861 319 484 8.7E-69 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 SUPERFAMILY SSF52922 491 619 3.93E-32 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 5.1E-40 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Gene3D G3DSA:3.40.50.970 335 495 1.9E-34 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Gene3D G3DSA:3.40.50.920 496 619 1.1E-35 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 SUPERFAMILY SSF52518 317 504 1.55E-57 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0310 a6d31085290c3176dc7fcf935b44c76d 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 1.3E-116 T 21-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 PANTHER PTHR10617:SF101 1 312 2.3E-75 T 21-04-2016 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 PANTHER PTHR10617 1 312 2.3E-75 T 21-04-2016 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 Pfam PF01494 FAD binding domain 135 165 3.1E-5 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 SUPERFAMILY SSF51905 3 168 2.68E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 SUPERFAMILY SSF51905 251 301 2.68E-29 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.3E-11 T 21-04-2016 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 5.3E-11 T 21-04-2016 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 5.3E-11 T 21-04-2016 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 Gene3D G3DSA:3.50.50.60 1 171 1.7E-20 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4176 9b8e13cf20f44855fd04067df119fcc3 354 Gene3D G3DSA:3.50.50.60 263 297 1.7E-20 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 PANTHER PTHR10996 1 330 1.4E-192 T 21-04-2016 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 281 4.9E-18 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 8.2E-28 T 21-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 SUPERFAMILY SSF51735 91 257 3.84E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Gene3D G3DSA:3.40.50.720 113 259 1.0E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 SUPERFAMILY SSF52283 4 110 1.47E-18 T 21-04-2016 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 PANTHER PTHR10996:SF111 1 330 1.4E-192 T 21-04-2016 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Gene3D G3DSA:3.40.50.720 2 112 1.1E-24 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 1.3E-32 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SDY_2519 47c66b423e69ed174dd8a4467fd36e83 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.907 T 21-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 SDY_2434 dbf4191b6d36d0e3e09ff99fb1652822 359 Gene3D G3DSA:3.20.20.190 32 355 4.7E-95 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SDY_2434 dbf4191b6d36d0e3e09ff99fb1652822 359 PANTHER PTHR23344 8 355 5.6E-118 T 21-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SDY_2434 dbf4191b6d36d0e3e09ff99fb1652822 359 SUPERFAMILY SSF51695 32 355 2.09E-93 T 21-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SDY_2434 dbf4191b6d36d0e3e09ff99fb1652822 359 PANTHER PTHR23344:SF7 8 355 5.6E-118 T 21-04-2016 SDY_2434 dbf4191b6d36d0e3e09ff99fb1652822 359 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 350 2.6E-78 T 21-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 Gene3D G3DSA:3.40.50.300 5 227 2.6E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 SMART SM00382 35 225 1.5E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 PANTHER PTHR24220:SF509 8 227 7.0E-117 T 21-04-2016 SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 PANTHER PTHR24220 8 227 7.0E-117 T 21-04-2016 SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 SUPERFAMILY SSF52540 6 226 2.83E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0405 439931bf72e4619606a2aaf8cd3a2bb1 228 Pfam PF00005 ABC transporter 27 174 4.6E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 19 55 6.3E-7 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 38 70 1.5E-5 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PRINTS PR01484 Pertactin virulence factor family signature 571 594 2.8E-7 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PRINTS PR01484 Pertactin virulence factor family signature 461 485 2.8E-7 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PRINTS PR01484 Pertactin virulence factor family signature 664 684 2.8E-7 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PRINTS PR01484 Pertactin virulence factor family signature 600 621 2.8E-7 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PRINTS PR01484 Pertactin virulence factor family signature 639 664 2.8E-7 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Pfam PF03212 Pertactin 252 376 3.2E-46 T 21-04-2016 IPR004899 Pertactin, central region SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PANTHER PTHR12338 6 684 3.7E-129 T 21-04-2016 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 SMART SM00869 420 673 5.1E-40 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 PANTHER PTHR12338:SF7 6 684 3.7E-129 T 21-04-2016 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 SUPERFAMILY SSF51126 16 375 3.45E-38 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 5 66 2.4E-24 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 78 135 5.6E-20 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Gene3D G3DSA:2.40.128.130 381 684 1.2E-73 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 SUPERFAMILY SSF103515 389 684 1.57E-46 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Gene3D G3DSA:2.160.20.20 10 377 3.4E-55 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 277 684 4.1E-112 T 21-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SDY_0889 b304ef5f5d3d9a52c4223531a82e83fe 684 Pfam PF03797 Autotransporter beta-domain 419 667 1.4E-49 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_2981 be27e644b13994f36f3bfab71de706cc 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.1E-13 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 PANTHER PTHR11228:SF6 1 54 4.1E-64 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 PANTHER PTHR11228:SF6 73 222 4.1E-64 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.7E-111 T 21-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 PANTHER PTHR11228 1 54 4.1E-64 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 PANTHER PTHR11228 73 222 4.1E-64 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 PIRSF PIRSF000370 1 223 2.5E-72 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 SUPERFAMILY SSF102114 24 119 3.79E-7 T 21-04-2016 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 Pfam PF04055 Radical SAM superfamily 27 132 3.1E-8 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 Gene3D G3DSA:3.20.20.70 29 136 1.3E-7 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2981 be27e644b13994f36f3bfab71de706cc 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.34 T 21-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 233 827 1.1E-192 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF55008 2 67 2.09E-13 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:3.30.70.100 101 165 4.9E-24 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:2.70.150.10 265 420 4.1E-26 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Pfam PF00403 Heavy-metal-associated domain 8 62 3.4E-11 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Pfam PF00403 Heavy-metal-associated domain 105 159 3.0E-15 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 718 740 - T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF81665 420 515 2.22E-13 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF81665 286 323 2.22E-13 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF81665 767 786 2.22E-13 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 690 706 6.5E-9 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 749 774 6.5E-9 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 718 734 6.5E-9 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF56784 519 539 1.35E-58 T 21-04-2016 IPR023214 HAD-like domain SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF56784 576 824 1.35E-58 T 21-04-2016 IPR023214 HAD-like domain SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF55008 101 166 3.8E-19 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 518 732 6.2E-50 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 2.3E-26 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:3.30.70.100 1 65 2.1E-18 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 795 7.8E-88 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:3.40.50.1000 494 534 1.4E-55 T 21-04-2016 IPR023214 HAD-like domain SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:3.40.50.1000 646 786 1.4E-55 T 21-04-2016 IPR023214 HAD-like domain SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 SUPERFAMILY SSF81653 322 419 2.62E-23 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PANTHER PTHR24093 91 829 0.0 T 21-04-2016 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Pfam PF00122 E1-E2 ATPase 290 511 7.2E-63 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 Gene3D G3DSA:3.40.1110.10 535 645 2.6E-17 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 105 134 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 827 3.0E-183 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SDY_0434 621380b4a3818c4cdd6066ce9fdc9220 834 PANTHER PTHR24093:SF319 91 829 0.0 T 21-04-2016 SDY_1564 de58233992608b88fb738a576b851709 445 Gene3D G3DSA:1.10.3080.10 73 441 6.8E-70 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 SUPERFAMILY SSF81340 72 442 3.01E-81 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 PANTHER PTHR11689 112 440 5.3E-75 T 21-04-2016 SDY_1564 de58233992608b88fb738a576b851709 445 PRINTS PR00762 Chloride channel signature 180 199 4.9E-21 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 PRINTS PR00762 Chloride channel signature 130 149 4.9E-21 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 PRINTS PR00762 Chloride channel signature 344 364 4.9E-21 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 PRINTS PR00762 Chloride channel signature 379 395 4.9E-21 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 PRINTS PR00762 Chloride channel signature 397 416 4.9E-21 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_1564 de58233992608b88fb738a576b851709 445 Pfam PF00654 Voltage gated chloride channel 91 429 3.0E-75 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 SUPERFAMILY SSF52540 268 484 9.87E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 SUPERFAMILY SSF52540 9 231 2.39E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 PANTHER PTHR24220:SF440 11 385 5.1E-268 T 21-04-2016 SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 Pfam PF00005 ABC transporter 25 174 5.1E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 Pfam PF00005 ABC transporter 279 430 7.1E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 Gene3D G3DSA:3.40.50.300 7 234 6.1E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 Gene3D G3DSA:3.40.50.300 268 484 4.0E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 SMART SM00382 34 222 1.3E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 SMART SM00382 285 479 0.33 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 PANTHER PTHR24220 11 385 5.1E-268 T 21-04-2016 SDY_4247 7dd95f91d96319d16126a76f85b7da23 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 Gene3D G3DSA:3.40.1190.20 18 276 5.5E-68 T 21-04-2016 IPR029056 Ribokinase-like SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 Hamap MF_01638 Pyridoxine kinase [pdxK]. 1 283 55.643 T 21-04-2016 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 Pfam PF08543 Phosphomethylpyrimidine kinase 88 265 8.3E-25 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 PANTHER PTHR10534 6 276 1.2E-165 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 SUPERFAMILY SSF53613 18 274 6.55E-59 T 21-04-2016 IPR029056 Ribokinase-like SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 16 275 2.9E-51 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_2615 fa9d9b01e098a9d972afcacceff46800 283 PANTHER PTHR10534:SF6 6 276 1.2E-165 T 21-04-2016 SDY_1502 ae8ceacb9ffbf8ae11d670da6341e064 125 PANTHER PTHR33293 1 124 1.8E-42 T 21-04-2016 SDY_1502 ae8ceacb9ffbf8ae11d670da6341e064 125 Pfam PF03400 IS1 transposase 1 125 1.3E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2184 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2184 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2184 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2184 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1678 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1678 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1678 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1678 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1326 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1326 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1326 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1326 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1444 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1444 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1444 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1444 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2291 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2291 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2291 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2291 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2755 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2755 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2755 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2755 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2770 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2770 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2770 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2770 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2819 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2819 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2819 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2819 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1481 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1481 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1481 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1481 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2411 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2411 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2411 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2411 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2843 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2843 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2843 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2843 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1452 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1452 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1452 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1452 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4195 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_4195 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4195 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4195 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1901 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1901 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1901 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1901 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2008 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2008 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2008 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2008 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2990 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_2990 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2990 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2990 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1352 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1352 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1352 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1352 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0770 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_0770 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0770 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0770 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1789 e16926f913791a55a42aac2df861e505 100 PANTHER PTHR33215 3 100 3.7E-19 T 21-04-2016 SDY_1789 e16926f913791a55a42aac2df861e505 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1789 e16926f913791a55a42aac2df861e505 100 SUPERFAMILY SSF46689 4 94 3.23E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1789 e16926f913791a55a42aac2df861e505 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 Pfam PF00294 pfkB family carbohydrate kinase 79 293 5.4E-9 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584:SF202 17 293 1.1E-219 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584:SF202 332 376 1.1E-219 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584:SF202 393 434 1.1E-219 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 SUPERFAMILY SSF53613 36 305 3.12E-45 T 21-04-2016 IPR029056 Ribokinase-like SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 SUPERFAMILY SSF53613 338 416 3.12E-45 T 21-04-2016 IPR029056 Ribokinase-like SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 Gene3D G3DSA:3.40.1190.20 95 298 2.2E-48 T 21-04-2016 IPR029056 Ribokinase-like SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 Gene3D G3DSA:3.40.1190.20 337 433 2.2E-48 T 21-04-2016 IPR029056 Ribokinase-like SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 Gene3D G3DSA:3.30.1110.10 45 94 8.2E-8 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584 17 293 1.1E-219 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584 332 376 1.1E-219 T 21-04-2016 SDY_0442 d0a0724a380ce7dc319c7afa847faa90 434 PANTHER PTHR10584 393 434 1.1E-219 T 21-04-2016 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.6E-15 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 78 2.6E-15 T 21-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 PANTHER PTHR34476 2 91 7.5E-33 T 21-04-2016 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 21-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_4081 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 21-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_1469a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1469a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_1469a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_1469a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4810 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4810 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_4810 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_4810 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1537a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1537a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_1537a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_1537a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4803 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4803 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_4803 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_4803 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0303a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0303a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_0303a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_0303a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0470a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0470a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_0470a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_0470a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1695a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1695a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293:SF2 1 89 6.6E-20 T 21-04-2016 SDY_1695a 21729b92b714997e951c2e1d323b3b2c 90 PANTHER PTHR33293 1 89 6.6E-20 T 21-04-2016 SDY_1695a 21729b92b714997e951c2e1d323b3b2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1103 33fb3d053aad10fe4b94b1aac17a4bd1 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 2.1E-36 T 21-04-2016 IPR019705 Protein of unknown function DUF2594 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 2.0E-46 T 21-04-2016 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 SUPERFAMILY SSF53850 21 326 1.09E-93 T 21-04-2016 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 Gene3D G3DSA:3.40.190.10 170 295 1.2E-33 T 21-04-2016 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 Gene3D G3DSA:3.40.190.10 21 164 2.5E-51 T 21-04-2016 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 21-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 5.0E-192 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 21-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 PANTHER PTHR30368:SF2 4 329 2.9E-198 T 21-04-2016 SDY_3830 2497ca89c3acb99739c5aaa3e0bb238d 329 PANTHER PTHR30368 4 329 2.9E-198 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 SDY_4681 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4681 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4681 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4681 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0350a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0350a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0350a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0350a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4679 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4679 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4679 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4679 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0314a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0314a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0314a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0314a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4781 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4781 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4781 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4781 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1290a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1290a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1290a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1290a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1053a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1053a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1053a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1053a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1176a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1176a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1176a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1176a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1430a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1430a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1430a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1430a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4720 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4720 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4720 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4720 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1101a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1101a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1101a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1101a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4747 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4747 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4747 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4747 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1244a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1244a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1244a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1244a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4673 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4673 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4673 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4673 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4812 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4812 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4812 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4812 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4807 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4807 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4807 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4807 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1238a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1238a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1238a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1238a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4676 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4676 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4676 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4676 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4692 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4692 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4692 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4692 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1057a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1057a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1057a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1057a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4797 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4797 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4797 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4797 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4804 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4804 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4804 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4804 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1203a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1203a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1203a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1203a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1682a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1682a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1682a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1682a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4704 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4704 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4704 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4704 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4770 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4770 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4770 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4770 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4768 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4768 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4768 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4768 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4707 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4707 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4707 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4707 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4765 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4765 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4765 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4765 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4736 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4736 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4736 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4736 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4773 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4773 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4773 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4773 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4712 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4712 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4712 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4712 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4739 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4739 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4739 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4739 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4684 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4684 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4684 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4684 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4801 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4801 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4801 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4801 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4744 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4744 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4744 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4744 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_803a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_803a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_803a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_803a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4687 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4687 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4687 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4687 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0375a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0375a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0375a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0375a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1580a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1580a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1580a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1580a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1466a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1466a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1466a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1466a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4754 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4754 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4754 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4754 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0562a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0562a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0562a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0562a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4757 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4757 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4757 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4757 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4691 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4691 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4691 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4691 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4783 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4783 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4783 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4783 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY0152a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY0152a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY0152a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY0152a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4725 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4725 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4725 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4725 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1476a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1476a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1476a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1476a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4683 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4683 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4683 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4683 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4701 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4701 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4701 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4701 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0022a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0022a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0022a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0022a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4728 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4728 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4728 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4728 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4814 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4814 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4814 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4814 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4733 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4733 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4733 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4733 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4791 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4791 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4791 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4791 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4670 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4670 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4670 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4670 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4743 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4743 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4743 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4743 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4775 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4775 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4775 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4775 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1084a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1084a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1084a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1084a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4668 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4668 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4668 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4668 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0999a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0999a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0999a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0999a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4714 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4714 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4714 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4714 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4811 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4811 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4811 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4811 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0886a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0886a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0886a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0886a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1440a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1440a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1440a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1440a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0767a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0767a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0767a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0767a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0637a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0637a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0637a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0637a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1661a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1661a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1661a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1661a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4749 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4749 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4749 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4749 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4780 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4780 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4780 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4780 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4778 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4778 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4778 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4778 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4732 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4732 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4732 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4732 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4759 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4759 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4759 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4759 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0676a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0676a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0676a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0676a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4761 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4761 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4761 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4761 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1061a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1061a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1061a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1061a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0254a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0254a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0254a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0254a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1324a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1324a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1324a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1324a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4735 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4735 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4735 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4735 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1370a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1370a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1370a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1370a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4764 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4764 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4764 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4764 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4703 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4703 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4703 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4703 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4800 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4800 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4800 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4800 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4667 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4667 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4667 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4667 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4793 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4793 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4793 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4793 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4688 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4688 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4688 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4688 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4690 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4690 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4690 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4690 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0995a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0995a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0995a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0995a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0485a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0485a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0485a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0485a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4711 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4711 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4711 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4711 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4709 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4709 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4709 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4709 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4693 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4693 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4693 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4693 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4738 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4738 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4738 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4738 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0017a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0017a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0017a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0017a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4740 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4740 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4740 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4740 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4719 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4719 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4719 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4719 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4721 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4721 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4721 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4721 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0084a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0084a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0084a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0084a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4678 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4678 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4678 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4678 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0288a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0288a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0288a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0288a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4680 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4680 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4680 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4680 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4724 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4724 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4724 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4724 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1556a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1556a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1556a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1556a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4816 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4816 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4816 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4816 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1699a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1699a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1699a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1699a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4782 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4782 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4782 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4782 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0801a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0801a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0801a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0801a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1541a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1541a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1541a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1541a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1031a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1031a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1031a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1031a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4756 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4756 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4756 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4756 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4699 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4699 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4699 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4699 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4672 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4672 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4672 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4672 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4788 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4788 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4788 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4788 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0260a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0260a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0260a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0260a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4790 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4790 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4790 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4790 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1216a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1216a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1216a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1216a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0347a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0347a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0347a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0347a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4700 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4700 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4700 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4700 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1500a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1500a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1500a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1500a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1407a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1407a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1407a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1407a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4785 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4785 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4785 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4785 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0102a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0102a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0102a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0102a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4727 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4727 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4727 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4727 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4769 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4769 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4769 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4769 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0263a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0263a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0263a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0263a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4710 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4710 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4710 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4710 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4708 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4708 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4708 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4708 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1599a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1599a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1599a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1599a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1042a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1042a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1042a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1042a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4808 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4808 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4808 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4808 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1572a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1572a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1572a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1572a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4737 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4737 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4737 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4737 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0572a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0572a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0572a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0572a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1667a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1667a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1667a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1667a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4805 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4805 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4805 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4805 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4742 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4742 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4742 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4742 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0311a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0311a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0311a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0311a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4798 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4798 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4798 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4798 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1215a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1215a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1215a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1215a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4771 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4771 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4771 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4771 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4745 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4745 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4745 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4745 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0371a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0371a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0371a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0371a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1468a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1468a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1468a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1468a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1301a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1301a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1301a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1301a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4671 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4671 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4671 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4671 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4774 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4774 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4774 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4774 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0241a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0241a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0241a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0241a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0177a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0177a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0177a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0177a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4669 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4669 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4669 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4669 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1200a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1200a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1200a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1200a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4698 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4698 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4698 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4698 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4726 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4726 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4726 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4726 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0413a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0413a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0413a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0413a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4729 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4729 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4729 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4729 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4702 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4702 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4702 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4702 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1021a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1021a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1021a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1021a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1414a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1414a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1414a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1414a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4787 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4787 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4787 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4787 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4758 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4758 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4758 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4758 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4677 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4677 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4677 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4677 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1408a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1408a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1408a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1408a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4734 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4734 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4734 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4734 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1069a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1069a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1069a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1069a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_0537a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0537a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_0537a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0537a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4763 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4763 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4763 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4763 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_4766 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4766 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_4766 ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4766 ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1512a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1512a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1512a ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1512a ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_1682b ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1682b ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293:SF2 1 89 1.5E-20 T 21-04-2016 SDY_1682b ad2284ef4cdd785d88c8863faf04cde9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1682b ad2284ef4cdd785d88c8863faf04cde9 90 PANTHER PTHR33293 1 89 1.5E-20 T 21-04-2016 SDY_2802 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2802 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2802 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3626 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3626 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3626 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1662 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1662 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1662 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3546 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3546 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3546 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1874 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1874 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1874 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4496 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4496 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4496 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1036 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1036 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1036 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2695 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2695 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2695 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4452 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4452 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4452 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1061 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1061 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1061 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2148 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2148 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2148 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0801 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0801 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0801 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0261 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0261 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0261 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0653 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0653 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0653 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1468 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1468 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1468 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0470 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0470 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0470 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1542 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1542 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1542 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2660 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2660 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2660 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3229 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3229 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3229 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2975 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2975 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2975 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1070 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1070 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1070 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2874 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2874 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2874 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1574 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1574 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1574 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2314 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2314 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2314 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4473 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4473 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4473 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0260 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0260 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0260 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2202 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2202 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2202 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2002 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2002 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2002 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0805 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0805 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0805 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2063 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2063 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2063 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0255 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0255 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0255 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0766 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0766 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0766 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2797 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2797 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2797 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3583 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3583 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3583 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0347 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0347 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0347 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2100 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2100 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2100 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4190 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4190 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4190 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1119 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1119 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1119 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1081 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1081 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1081 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2141 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2141 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2141 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1102 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1102 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1102 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1635 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1635 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1635 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2138 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2138 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2138 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1832 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1832 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1832 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1815 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1815 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1815 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1031 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1031 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1031 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0617 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0617 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0617 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4645 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4645 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4645 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1418 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1418 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1418 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1503 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1503 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1503 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1299 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1299 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1299 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2567 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2567 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2567 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2761 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2761 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2761 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2776 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2776 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2776 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0640 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0640 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0640 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1238 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1238 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1238 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3270 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3270 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3270 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1203 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1203 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1203 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1369 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1369 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1369 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4356 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4356 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4356 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2565 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2565 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2565 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2098 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2098 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2098 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2648 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2648 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2648 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4151 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4151 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4151 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4373 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4373 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4373 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1054 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1054 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1054 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1446 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1446 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1446 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0637 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_0637 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_0637 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3293 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3293 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3293 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3535 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_3535 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_3535 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4506 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_4506 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_4506 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1484 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1484 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1484 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1983 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1983 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1983 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2402 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_2402 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_2402 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1738 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1738 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1738 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1512 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1512 e56af170483e22bce2be7cec244156d9 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1512 e56af170483e22bce2be7cec244156d9 131 Pfam PF03400 IS1 transposase 2 131 3.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 Pfam PF00005 ABC transporter 23 170 3.1E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 SMART SM00382 32 248 2.5E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 SUPERFAMILY SSF52540 6 233 3.89E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 PANTHER PTHR24220 8 273 2.9E-152 T 21-04-2016 SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 Gene3D G3DSA:3.40.50.300 3 235 2.6E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1456 e85e58d1705c098765bfea005fb5a6e3 275 PANTHER PTHR24220:SF533 8 273 2.9E-152 T 21-04-2016 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 Gene3D G3DSA:3.40.50.140 135 171 0.001 T 21-04-2016 IPR006171 Toprim domain SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 PANTHER PTHR30446:SF0 1 201 1.8E-119 T 21-04-2016 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 SMART SM00493 81 166 2.1E-20 T 21-04-2016 IPR006171 Toprim domain SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 21-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 SUPERFAMILY SSF111304 2 199 1.83E-71 T 21-04-2016 IPR023627 Recombination protein RecR SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 PANTHER PTHR30446 1 201 1.8E-119 T 21-04-2016 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 Pfam PF02132 RecR protein 41 77 2.0E-15 T 21-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.1E-83 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.302 T 21-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SDY_0447 f2617ac4f618c10cded24974cd88fb9a 201 Pfam PF13662 Toprim domain 82 172 1.7E-24 T 21-04-2016 IPR006171 Toprim domain SDY_0111 74377fab52a236b0e0824f8383c6292c 152 PANTHER PTHR34701 2 151 2.9E-64 T 21-04-2016 SDY_0111 74377fab52a236b0e0824f8383c6292c 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 3.0E-78 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SDY_0111 74377fab52a236b0e0824f8383c6292c 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.157 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SDY_0111 74377fab52a236b0e0824f8383c6292c 152 SUPERFAMILY SSF89447 1 135 9.0E-46 T 21-04-2016 SDY_0111 74377fab52a236b0e0824f8383c6292c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.2E-24 T 21-04-2016 IPR020603 MraZ domain SDY_0111 74377fab52a236b0e0824f8383c6292c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 2.7E-21 T 21-04-2016 IPR020603 MraZ domain SDY_0111 74377fab52a236b0e0824f8383c6292c 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 2.1E-67 T 21-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-14 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-14 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-14 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.1E-14 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Gene3D G3DSA:3.50.50.60 2 105 2.2E-23 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 6.2E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.3E-5 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.3E-5 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PANTHER PTHR11493:SF52 419 834 0.0 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PANTHER PTHR11493:SF52 2 256 0.0 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 SUPERFAMILY SSF51905 2 189 2.46E-39 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 7.1E-15 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 21-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PIRSF PIRSF037149 1 835 0.0 T 21-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 SUPERFAMILY SSF56014 633 808 1.57E-46 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PANTHER PTHR11493 419 834 0.0 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PANTHER PTHR11493 2 256 0.0 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.8E-11 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.8E-11 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.8E-11 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.8E-11 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Gene3D G3DSA:3.50.50.60 106 309 3.9E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Gene3D G3DSA:3.30.413.10 634 768 1.7E-30 T 21-04-2016 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 SUPERFAMILY SSF51905 144 310 5.7E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 SUPERFAMILY SSF55124 502 627 5.72E-31 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.3E-15 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SDY_3527 5a6e0647aaa287f520e5f27f02eb8b26 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.0E-11 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PANTHER PTHR30620 35 471 0.0 T 21-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PANTHER PTHR30620 487 765 0.0 T 21-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 Gene3D G3DSA:3.40.50.1700 383 651 2.2E-80 T 21-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 Gene3D G3DSA:3.20.20.300 35 366 6.1E-104 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 5.3E-22 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 5.3E-22 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 5.3E-22 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 5.3E-22 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 5.3E-22 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 3.1E-101 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 5.3E-61 T 21-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 SUPERFAMILY SSF52279 395 464 2.75E-58 T 21-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 SUPERFAMILY SSF52279 495 651 2.75E-58 T 21-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 SUPERFAMILY SSF51445 34 394 2.32E-98 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 Pfam PF14310 Fibronectin type III-like domain 686 754 3.1E-23 T 21-04-2016 IPR026891 Fibronectin type III-like domain SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 SMART SM01217 685 754 8.0E-32 T 21-04-2016 IPR026891 Fibronectin type III-like domain SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PANTHER PTHR30620:SF5 35 471 0.0 T 21-04-2016 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 PANTHER PTHR30620:SF5 487 765 0.0 T 21-04-2016 SDY_2156 018b1873c7d31ae072af74323c3dfffa 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 21-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SDY_3137 6c6e3e53355e04042d9a108c9463917c 131 PANTHER PTHR33293 6 126 6.5E-24 T 21-04-2016 SDY_3137 6c6e3e53355e04042d9a108c9463917c 131 PANTHER PTHR33293:SF1 6 126 6.5E-24 T 21-04-2016 SDY_3137 6c6e3e53355e04042d9a108c9463917c 131 Pfam PF03400 IS1 transposase 2 131 6.2E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 PANTHER PTHR34606 29 201 5.4E-66 T 21-04-2016 SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 Pfam PF04972 BON domain 135 199 2.0E-19 T 21-04-2016 IPR007055 BON domain SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 Pfam PF04972 BON domain 55 122 4.3E-19 T 21-04-2016 IPR007055 BON domain SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 SMART SM00749 60 123 1.6E-12 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 SMART SM00749 139 201 1.7E-10 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SDY_4636 c6bc79204fdb3ac8562ac4909c75fe92 201 PANTHER PTHR34606:SF3 29 201 5.4E-66 T 21-04-2016 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:3.40.50.300 550 637 7.3E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:3.40.50.300 280 382 7.3E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.6E-73 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.491 T 21-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.4E-70 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 SUPERFAMILY SSF52540 2 636 2.03E-162 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 PANTHER PTHR11070:SF19 1 667 0.0 T 21-04-2016 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:3.40.50.300 2 104 4.0E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:3.40.50.300 182 279 4.0E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:1.10.10.160 108 181 3.1E-25 T 21-04-2016 IPR013986 DExx box DNA helicase domain SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 Gene3D G3DSA:1.10.486.10 383 525 6.3E-41 T 21-04-2016 SDY_3971 134832aade2c77d157b40b2f06fb21d6 673 PANTHER PTHR11070 1 667 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_0858 a90a80db035fe220e4522294001109e2 890 Gene3D G3DSA:1.20.120.160 776 889 5.3E-36 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_0858 a90a80db035fe220e4522294001109e2 890 PANTHER PTHR26402:SF603 145 272 2.9E-92 T 21-04-2016 SDY_0858 a90a80db035fe220e4522294001109e2 890 PANTHER PTHR26402:SF603 94 110 2.9E-92 T 21-04-2016 SDY_0858 a90a80db035fe220e4522294001109e2 890 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 890 24.743 T 21-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 SDY_0858 a90a80db035fe220e4522294001109e2 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 675 6.8E-10 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0858 a90a80db035fe220e4522294001109e2 890 Pfam PF01627 Hpt domain 811 868 1.3E-10 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_0858 a90a80db035fe220e4522294001109e2 890 PANTHER PTHR26402 145 272 2.9E-92 T 21-04-2016 SDY_0858 a90a80db035fe220e4522294001109e2 890 PANTHER PTHR26402 94 110 2.9E-92 T 21-04-2016 SDY_0858 a90a80db035fe220e4522294001109e2 890 SUPERFAMILY SSF47226 803 889 1.1E-21 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_0858 a90a80db035fe220e4522294001109e2 890 SUPERFAMILY SSF55874 517 677 6.3E-14 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0858 a90a80db035fe220e4522294001109e2 890 Gene3D G3DSA:3.30.565.10 523 677 2.1E-16 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0858 a90a80db035fe220e4522294001109e2 890 SMART SM00387 565 678 6.6E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0858 a90a80db035fe220e4522294001109e2 890 Pfam PF16359 RcsD-ABL domain 688 789 2.3E-39 T 21-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain SDY_3212 1bcdf687e7f0ab8cbd342cf47b203ccf 193 PANTHER PTHR10204 1 192 8.4E-135 T 21-04-2016 SDY_3212 1bcdf687e7f0ab8cbd342cf47b203ccf 193 Gene3D G3DSA:3.40.50.360 1 192 7.2E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3212 1bcdf687e7f0ab8cbd342cf47b203ccf 193 PANTHER PTHR10204:SF36 1 192 8.4E-135 T 21-04-2016 SDY_3212 1bcdf687e7f0ab8cbd342cf47b203ccf 193 Pfam PF02525 Flavodoxin-like fold 3 188 9.7E-38 T 21-04-2016 IPR003680 Flavodoxin-like fold SDY_3212 1bcdf687e7f0ab8cbd342cf47b203ccf 193 SUPERFAMILY SSF52218 1 192 3.35E-43 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 1.3E-143 T 21-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 Pfam PF00107 Zinc-binding dehydrogenase 158 282 1.6E-17 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 SUPERFAMILY SSF51735 116 284 2.18E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 Gene3D G3DSA:3.40.50.720 125 289 2.2E-80 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 SUPERFAMILY SSF50129 1 144 7.55E-47 T 21-04-2016 IPR011032 GroES-like SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 SMART SM00829 12 321 1.1E-4 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 Gene3D G3DSA:3.90.180.10 1 85 1.1E-6 T 21-04-2016 IPR011032 GroES-like SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 PANTHER PTHR11695:SF13 15 324 4.7E-184 T 21-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 PANTHER PTHR11695 15 324 4.7E-184 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_3428 ff21eb0b5efd19d8ed555a80397226ab 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.8E-4 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 PIRSF PIRSF006223 2 109 1.9E-47 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 Gene3D G3DSA:3.30.1420.10 1 39 4.1E-13 T 21-04-2016 SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 PANTHER PTHR37010:SF1 1 109 1.4E-62 T 21-04-2016 SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 Gene3D G3DSA:1.10.10.370 40 109 1.8E-38 T 21-04-2016 SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 Pfam PF04358 DsrC like protein 4 109 4.8E-46 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 SUPERFAMILY SSF69721 2 109 4.58E-42 T 21-04-2016 IPR025526 DsrC-like domain SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-50 T 21-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE SDY_0944 3fe8afd9055f2057e406fc4b6e0b1ae9 109 PANTHER PTHR37010 1 109 1.4E-62 T 21-04-2016 SDY_1632 44a26782e612d818176e112843c24200 470 Pfam PF00171 Aldehyde dehydrogenase family 18 465 3.8E-140 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_1632 44a26782e612d818176e112843c24200 470 Gene3D G3DSA:3.40.605.10 19 255 4.4E-71 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_1632 44a26782e612d818176e112843c24200 470 Gene3D G3DSA:3.40.309.10 256 440 4.6E-64 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1632 44a26782e612d818176e112843c24200 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SDY_1632 44a26782e612d818176e112843c24200 470 PANTHER PTHR11699 19 470 1.5E-270 T 21-04-2016 SDY_1632 44a26782e612d818176e112843c24200 470 PANTHER PTHR11699:SF28 19 470 1.5E-270 T 21-04-2016 SDY_1632 44a26782e612d818176e112843c24200 470 SUPERFAMILY SSF53720 16 468 6.54E-143 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 PANTHER PTHR30055 1 194 1.1E-96 T 21-04-2016 SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 Gene3D G3DSA:1.10.357.10 8 194 4.5E-36 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 54 8.0E-10 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 SUPERFAMILY SSF48498 81 194 6.5E-23 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 189 3.0E-10 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 PANTHER PTHR30055:SF20 1 194 1.1E-96 T 21-04-2016 SDY_1872 bd7dd7d898e41e832f796ea34f8e317b 199 SUPERFAMILY SSF46689 7 78 3.23E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.4E-14 T 21-04-2016 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.4E-14 T 21-04-2016 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 3.4E-14 T 21-04-2016 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.4E-14 T 21-04-2016 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 Pfam PF01494 FAD binding domain 2 336 1.7E-21 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 1.1E-136 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 SUPERFAMILY SSF51905 2 175 1.81E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 SUPERFAMILY SSF51905 265 381 1.81E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PANTHER PTHR13789 1 392 1.8E-213 T 21-04-2016 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 Gene3D G3DSA:3.50.50.60 266 354 3.5E-36 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 Gene3D G3DSA:3.50.50.60 2 180 3.5E-36 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 1.8E-142 T 21-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 SDY_3174 f6527df02312e0f42b8ac302b6e10cfa 392 PANTHER PTHR13789:SF214 1 392 1.8E-213 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 308.083 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Gene3D G3DSA:3.40.50.300 2 192 9.3E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 8.2E-302 T 21-04-2016 IPR006297 Elongation factor 4 GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 SUPERFAMILY SSF54980 292 370 2.01E-18 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Gene3D G3DSA:3.30.70.240 401 489 3.8E-20 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 SUPERFAMILY SSF54980 399 493 3.93E-24 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 8.3E-50 T 21-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Pfam PF00679 Elongation factor G C-terminus 399 482 3.6E-19 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PANTHER PTHR23115:SF175 401 595 1.9E-279 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PANTHER PTHR23115:SF175 2 373 1.9E-279 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PANTHER PTHR23115 401 595 1.9E-279 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 PANTHER PTHR23115 2 373 1.9E-279 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 SUPERFAMILY SSF52540 2 235 4.65E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.1E-16 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.9E-12 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Gene3D G3DSA:2.40.30.10 193 289 2.3E-25 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 Gene3D G3DSA:3.30.70.870 291 369 7.8E-26 T 21-04-2016 SDY_2810 f722d7f2873c35eb5994f358612a46ff 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 65.714 T 21-04-2016 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961|UniPathway: UPA00263 SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 SUPERFAMILY SSF53639 2 219 1.14E-69 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 Gene3D G3DSA:3.40.225.10 2 227 6.9E-72 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 SMART SM01007 6 194 3.3E-68 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 9.2E-48 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 PANTHER PTHR22789:SF2 1 227 1.2E-138 T 21-04-2016 SDY_4367 33fe997bd100ba17b809febec4af4ff2 228 PANTHER PTHR22789 1 227 1.2E-138 T 21-04-2016 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:3.40.50.300 201 247 3.3E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:1.20.120.430 122 182 9.5E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:1.20.120.430 248 271 9.5E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:1.20.120.430 384 454 9.5E-60 T 21-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 4.9E-24 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 7.7E-25 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 SUPERFAMILY SSF116878 379 454 2.48E-51 T 21-04-2016 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 SUPERFAMILY SSF116878 121 220 2.48E-51 T 21-04-2016 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 7.1E-101 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Pfam PF12631 MnmE helical domain 123 451 6.2E-61 T 21-04-2016 IPR025867 MnmE, helical domain SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:3.30.1360.120 1 121 2.3E-42 T 21-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 SUPERFAMILY SSF52540 72 152 2.31E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 SUPERFAMILY SSF52540 188 372 2.31E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Gene3D G3DSA:3.40.50.300 286 376 1.5E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 PANTHER PTHR11649:SF56 8 454 2.5E-180 T 21-04-2016 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 PANTHER PTHR11649 8 454 2.5E-180 T 21-04-2016 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.374 T 21-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SDY_4189 cdcb7d2b08b617fabbdcf2e1e119ea5f 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 4.4E-34 T 21-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.808773E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.808773E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.808773E-43 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-53 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 PIRSF PIRSF002191 1 115 1.1E-50 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 SUPERFAMILY SSF50104 2 114 5.52E-48 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.739 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 Pfam PF01245 Ribosomal protein L19 3 113 3.7E-50 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 21-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2780 f5a64710e99eaf586d30566f0129af5e 115 PANTHER PTHR15680 1 114 3.3E-59 T 21-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 SUPERFAMILY SSF90123 2 245 2.49E-44 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 PANTHER PTHR24221:SF260 1 508 1.9E-213 T 21-04-2016 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 SMART SM00382 289 475 8.6E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0417 9c207db9c11439c4127b81bf722dd318 508 SUPERFAMILY SSF52540 253 490 2.19E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0417 9c207db9c11439c4127b81bf722dd318 508 PANTHER PTHR24221 1 508 1.9E-213 T 21-04-2016 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 Pfam PF00664 ABC transporter transmembrane region 4 210 8.1E-26 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 Gene3D G3DSA:1.20.1560.10 2 247 2.2E-46 T 21-04-2016 SDY_0417 9c207db9c11439c4127b81bf722dd318 508 Gene3D G3DSA:3.40.50.300 264 493 1.8E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0417 9c207db9c11439c4127b81bf722dd318 508 Pfam PF00005 ABC transporter 285 429 4.5E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 PANTHER PTHR10108:SF864 1 251 9.1E-189 T 21-04-2016 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 21-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 Gene3D G3DSA:3.40.50.150 23 247 1.6E-60 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.3E-89 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.601 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 1.2E-113 T 21-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 PANTHER PTHR10108 1 251 9.1E-189 T 21-04-2016 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 21-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3910 2689b905d6a0de9bb235c08cee857bf8 251 SUPERFAMILY SSF53335 18 249 3.87E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 SUPERFAMILY SSF51998 8 762 5.95E-285 T 21-04-2016 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 PANTHER PTHR30191 1 764 0.0 T 21-04-2016 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 2.3E-194 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 PANTHER PTHR30191:SF7 1 764 0.0 T 21-04-2016 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 Gene3D G3DSA:3.20.70.20 9 762 0.0 T 21-04-2016 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 PIRSF PIRSF000379 12 764 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_3306 4347165820f5f58b7c8a323934c6b95f 764 Pfam PF01228 Glycine radical 634 745 4.6E-42 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 PANTHER PTHR17224:SF1 2 194 1.4E-86 T 21-04-2016 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 SUPERFAMILY SSF53178 3 192 3.01E-71 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 3.9E-75 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 21-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.637 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 Gene3D G3DSA:3.40.50.1470 3 192 8.8E-73 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 PANTHER PTHR17224 2 194 1.4E-86 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 1.8E-54 T 21-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SDY_1253 2d189a4b4d16918bc4f3ba611b6a6c99 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 21-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 PANTHER PTHR10314 3 318 3.5E-158 T 21-04-2016 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 PANTHER PTHR10314:SF110 3 318 3.5E-158 T 21-04-2016 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 Gene3D G3DSA:3.40.50.1100 133 314 4.9E-72 T 21-04-2016 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 6.6E-146 T 21-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 Gene3D G3DSA:3.40.50.1100 36 132 1.4E-38 T 21-04-2016 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 4.9E-137 T 21-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SDY_2611 0ccca99d116a45e42df18e4203003f72 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.1E-68 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_2611 0ccca99d116a45e42df18e4203003f72 323 SUPERFAMILY SSF53686 3 317 4.85E-97 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_2611 0ccca99d116a45e42df18e4203003f72 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 21-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 PANTHER PTHR11938:SF104 18 215 1.4E-116 T 21-04-2016 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 Gene3D G3DSA:3.30.70.20 168 204 2.7E-25 T 21-04-2016 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 Gene3D G3DSA:3.30.70.20 53 116 2.7E-25 T 21-04-2016 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 Gene3D G3DSA:3.30.70.20 117 167 1.2E-24 T 21-04-2016 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 PANTHER PTHR11938 18 215 1.4E-116 T 21-04-2016 SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 Pfam PF13247 4Fe-4S dicluster domain 101 197 3.2E-22 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1899 cc08b2c65cfb6a8eefda0965ca4220d2 239 SUPERFAMILY SSF54862 51 236 3.24E-52 T 21-04-2016 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 PANTHER PTHR10978:SF4 3 129 5.3E-81 T 21-04-2016 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 3.9E-31 T 21-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 3.5E-40 T 21-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 SUPERFAMILY SSF81343 2 129 4.14E-37 T 21-04-2016 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 21-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 Gene3D G3DSA:1.20.1300.10 3 129 7.8E-44 T 21-04-2016 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 PIRSF PIRSF000178 1 129 1.5E-33 T 21-04-2016 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 21-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 SDY_0659 2ff14aaa99058c88cf57dad6b75d557a 129 PANTHER PTHR10978 3 129 5.3E-81 T 21-04-2016 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 3.7E-112 T 21-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 Gene3D G3DSA:1.10.3720.10 19 273 1.4E-54 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 1.9E-114 T 21-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 PANTHER PTHR30406:SF7 7 277 6.4E-211 T 21-04-2016 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 PANTHER PTHR30406 7 277 6.4E-211 T 21-04-2016 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 1.1E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2620 842d09d858d0593ac7bed20f2e0fe9c5 277 SUPERFAMILY SSF161098 16 264 7.76E-58 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2472 ccc704c7dfc858f4d68deddc1fca31c9 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 5.3E-149 T 21-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SDY_2472 ccc704c7dfc858f4d68deddc1fca31c9 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.799 T 21-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SDY_2472 ccc704c7dfc858f4d68deddc1fca31c9 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.2E-90 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SDY_2472 ccc704c7dfc858f4d68deddc1fca31c9 485 PANTHER PTHR22773 1 485 2.3E-206 T 21-04-2016 SDY_2472 ccc704c7dfc858f4d68deddc1fca31c9 485 PANTHER PTHR22773:SF41 1 485 2.3E-206 T 21-04-2016 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Pfam PF07732 Multicopper oxidase 52 166 1.2E-26 T 21-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Gene3D G3DSA:2.60.40.420 172 288 1.3E-30 T 21-04-2016 IPR008972 Cupredoxin SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Gene3D G3DSA:2.60.40.420 357 467 3.9E-12 T 21-04-2016 IPR008972 Cupredoxin SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Pfam PF07731 Multicopper oxidase 359 468 5.4E-13 T 21-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 SUPERFAMILY SSF49503 314 466 2.25E-18 T 21-04-2016 IPR008972 Cupredoxin SDY_3220 827855e4ae2f541e902500163c2a4da0 470 PANTHER PTHR11709 52 287 1.2E-182 T 21-04-2016 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Pfam PF00394 Multicopper oxidase 223 287 3.6E-4 T 21-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.742 T 21-04-2016 IPR026589 Cell division protein FtsP GO:0043093 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 0.0015 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_3220 827855e4ae2f541e902500163c2a4da0 470 PANTHER PTHR11709:SF69 52 287 1.2E-182 T 21-04-2016 SDY_3220 827855e4ae2f541e902500163c2a4da0 470 SUPERFAMILY SSF49503 172 310 1.39E-30 T 21-04-2016 IPR008972 Cupredoxin SDY_3220 827855e4ae2f541e902500163c2a4da0 470 SUPERFAMILY SSF49503 3 165 3.7E-25 T 21-04-2016 IPR008972 Cupredoxin SDY_3220 827855e4ae2f541e902500163c2a4da0 470 Gene3D G3DSA:2.60.40.420 32 171 2.3E-21 T 21-04-2016 IPR008972 Cupredoxin SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 SUPERFAMILY SSF53383 1 422 6.27E-139 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 Pfam PF00202 Aminotransferase class-III 27 420 1.7E-132 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 3.0E-185 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 PANTHER PTHR11986:SF8 4 429 2.3E-222 T 21-04-2016 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 Gene3D G3DSA:3.90.1150.10 332 423 1.9E-65 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 Gene3D G3DSA:3.90.1150.10 1 61 1.9E-65 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 52.06 T 21-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 PANTHER PTHR11986 4 429 2.3E-222 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 PIRSF PIRSF000521 29 424 7.5E-30 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 Gene3D G3DSA:3.40.640.10 62 328 1.1E-92 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_0832 66cfd381f5366c6c47ae65c5fd3f5ffb 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 Gene3D G3DSA:3.40.50.300 3 171 4.9E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3667 9be9e10add45575d98285b029d75fcd0 773 Pfam PF07670 Nucleoside recognition 512 689 8.8E-37 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 Pfam PF07670 Nucleoside recognition 353 443 6.1E-13 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 5.6E-255 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649:SF37 1 150 2.9E-289 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649:SF37 262 612 2.9E-289 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649:SF37 658 725 2.9E-289 T 21-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649 1 150 2.9E-289 T 21-04-2016 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649 262 612 2.9E-289 T 21-04-2016 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 PANTHER PTHR11649 658 725 2.9E-289 T 21-04-2016 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 SUPERFAMILY SSF52540 4 170 1.23E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3667 9be9e10add45575d98285b029d75fcd0 773 Pfam PF02421 Ferrous iron transport protein B 5 162 3.8E-64 T 21-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SDY_3667 9be9e10add45575d98285b029d75fcd0 773 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.9E-20 T 21-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 Gene3D G3DSA:3.20.20.70 2 342 4.5E-111 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 21-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 PANTHER PTHR11911 1 163 1.7E-227 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 PANTHER PTHR11911 181 347 1.7E-227 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 PANTHER PTHR11911:SF97 1 163 1.7E-227 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 PANTHER PTHR11911:SF97 181 347 1.7E-227 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.5E-77 T 21-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 SMART SM01240 7 347 4.0E-138 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 SUPERFAMILY SSF51412 6 336 2.22E-99 T 21-04-2016 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.772 T 21-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 PIRSF PIRSF000235 1 347 4.2E-199 T 21-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 SDY_0134 98191d5f50ebc1d470c5e6c5583e1038 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 8.1E-214 T 21-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 Gene3D G3DSA:3.30.420.10 2 201 3.4E-87 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 PIRSF PIRSF000977 3 475 1.9E-200 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 PANTHER PTHR11046:SF2 1 475 0.0 T 21-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 SUPERFAMILY SSF53098 9 474 6.33E-135 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 Pfam PF00929 Exonuclease 13 188 1.2E-30 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 PANTHER PTHR11046 1 475 0.0 T 21-04-2016 SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 SMART SM00479 10 203 0.0018 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_2231 90f3fe9b70ae75e4df8cfbff3f4aef88 475 Pfam PF08411 Exonuclease C-terminal 212 472 2.6E-103 T 21-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 1.8E-23 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Pfam PF14815 NUDIX domain 234 343 9.2E-24 T 21-04-2016 IPR029119 MutY, C-terminal SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.4E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 SUPERFAMILY SSF48150 3 225 2.36E-78 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 SMART SM00478 39 190 2.7E-56 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 SMART SM00525 191 211 3.5E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Gene3D G3DSA:3.90.79.10 229 345 3.4E-24 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.9E-8 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Gene3D G3DSA:1.10.340.30 22 122 1.9E-45 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 PANTHER PTHR10359 5 350 2.8E-122 T 21-04-2016 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 SUPERFAMILY SSF55811 220 344 7.54E-28 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 Gene3D G3DSA:1.10.1670.10 123 224 3.4E-39 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SDY_3111 4aa956e4db52e5365f8a4b1f19066930 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 3.7E-133 T 21-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 SUPERFAMILY SSF51971 145 401 5.89E-69 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PANTHER PTHR11938:SF93 23 472 0.0 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 4.8E-38 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 4.8E-38 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 4.8E-38 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 4.8E-38 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 4.8E-38 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 PANTHER PTHR11938 23 472 0.0 T 21-04-2016 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.8E-38 T 21-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Gene3D G3DSA:3.40.50.720 401 470 9.1E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Gene3D G3DSA:3.40.50.720 150 236 9.1E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 4.7E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.9E-269 T 21-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Gene3D G3DSA:3.50.50.60 237 400 7.3E-51 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3394 5cacadfa1ef99f7596e6348bcb408fa2 472 Gene3D G3DSA:1.10.1060.10 5 149 8.8E-48 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 Pfam PF05343 M42 glutamyl aminopeptidase 43 325 9.5E-83 T 21-04-2016 IPR008007 Peptidase M42 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 SUPERFAMILY SSF101821 67 166 8.39E-20 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 Gene3D G3DSA:3.40.630.10 157 343 1.5E-76 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 Gene3D G3DSA:3.40.630.10 3 70 1.5E-76 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 Gene3D G3DSA:2.40.30.40 71 148 1.7E-26 T 21-04-2016 IPR023367 Peptidase M42, domain 2 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 PIRSF PIRSF001123 1 344 2.2E-116 T 21-04-2016 IPR008007 Peptidase M42 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 PANTHER PTHR32481 1 344 6.5E-146 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 SUPERFAMILY SSF53187 3 77 2.77E-62 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 SUPERFAMILY SSF53187 158 340 2.77E-62 T 21-04-2016 SDY_2583 0c8e44d8fa787e202a7b2fd395ee8d38 345 PANTHER PTHR32481:SF0 1 344 6.5E-146 T 21-04-2016 SDY_3105 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3105 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3302 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3302 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4484 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4484 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2308 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2308 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1365 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1365 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4192 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4192 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0203 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0203 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0544 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0544 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2934 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2934 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0500 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0500 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0994 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0994 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0476 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0476 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1822 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1822 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1470 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1470 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1722 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1722 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1754 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1754 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2125 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2125 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0267 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0267 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1545 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1545 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3071 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3071 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1397 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1397 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2442 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2442 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1359 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1359 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0258 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0258 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1298 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1298 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4242 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4242 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0272 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0272 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0976 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0976 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1093 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1093 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1592 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1592 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0044 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0044 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3869 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3869 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1959 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1959 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3314 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3314 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0656 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0656 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2849 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2849 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0615 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0615 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4216 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4216 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3230 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3230 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2993 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2993 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4375 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4375 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1411 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1411 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4233 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4233 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2252 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2252 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0086 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0086 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0402 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0402 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3059 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3059 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3585 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3585 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1744 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1744 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0431 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0431 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1715 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1715 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1478 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1478 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4273 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4273 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3224 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3224 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3627 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3627 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0105 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0105 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1346 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1346 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0149 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0149 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2957 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2957 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1337 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1337 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2548 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2548 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3608 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3608 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0236 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0236 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0669 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0669 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0671 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0671 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2122 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2122 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0516 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0516 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2539 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2539 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3645 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3645 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1772 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1772 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3296 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3296 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_2870 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2870 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1215 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1215 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4619 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4619 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3279 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3279 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_4437 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4437 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_1200 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1200 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0735 142b2201c05dbaa82136ec32a79a695e 125 Pfam PF03400 IS1 transposase 1 125 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0735 142b2201c05dbaa82136ec32a79a695e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_0619 f2ca27847194038720d1e8164e3637e1 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0619 f2ca27847194038720d1e8164e3637e1 91 Pfam PF03811 InsA N-terminal domain 2 36 1.4E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0619 f2ca27847194038720d1e8164e3637e1 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0619 f2ca27847194038720d1e8164e3637e1 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0619 f2ca27847194038720d1e8164e3637e1 91 PANTHER PTHR33293 2 91 2.0E-33 T 21-04-2016 SDY_3060 f2ca27847194038720d1e8164e3637e1 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3060 f2ca27847194038720d1e8164e3637e1 91 Pfam PF03811 InsA N-terminal domain 2 36 1.4E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3060 f2ca27847194038720d1e8164e3637e1 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3060 f2ca27847194038720d1e8164e3637e1 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3060 f2ca27847194038720d1e8164e3637e1 91 PANTHER PTHR33293 2 91 2.0E-33 T 21-04-2016 SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 PANTHER PTHR36540:SF1 1 94 1.8E-48 T 21-04-2016 SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 SUPERFAMILY SSF51182 1 94 1.38E-32 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 2.3E-33 T 21-04-2016 IPR009664 Protein of unknown function DUF1255 SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.726 T 21-04-2016 IPR009664 Protein of unknown function DUF1255 SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 PANTHER PTHR36540 1 94 1.8E-48 T 21-04-2016 SDY_0352 bab8ce8ea14c3c46572e53d52d80ac71 94 Gene3D G3DSA:2.60.120.10 1 94 3.7E-37 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 2.4E-86 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 358 1.2E-169 T 21-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 PANTHER PTHR11835 1 359 1.3E-241 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 PANTHER PTHR11835:SF37 1 359 1.3E-241 T 21-04-2016 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 Gene3D G3DSA:3.40.718.10 5 348 5.0E-120 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 SMART SM01329 6 355 7.3E-179 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 SUPERFAMILY SSF53659 1 359 1.92E-118 T 21-04-2016 SDY_1701 4477c06eb3f6617a0b6170de423314a3 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 21-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_1821 f11f1c5addf6fff4a3cda70723959ef2 196 PANTHER PTHR35531 1 194 2.1E-69 T 21-04-2016 SDY_1821 f11f1c5addf6fff4a3cda70723959ef2 196 PIRSF PIRSF030780 1 195 1.6E-126 T 21-04-2016 IPR016956 Inner membrane protein YdjM SDY_1821 f11f1c5addf6fff4a3cda70723959ef2 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 2.9E-34 T 21-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SDY_1821 f11f1c5addf6fff4a3cda70723959ef2 196 PANTHER PTHR35531:SF1 1 194 2.1E-69 T 21-04-2016 SDY_0980 d9039b4867634d1b7f65acf32532c507 198 Gene3D G3DSA:3.40.50.360 1 197 5.2E-74 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0980 d9039b4867634d1b7f65acf32532c507 198 PANTHER PTHR30546:SF10 1 197 8.2E-140 T 21-04-2016 SDY_0980 d9039b4867634d1b7f65acf32532c507 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.301 T 21-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SDY_0980 d9039b4867634d1b7f65acf32532c507 198 SUPERFAMILY SSF52218 1 197 1.21E-62 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0980 d9039b4867634d1b7f65acf32532c507 198 Pfam PF03358 NADPH-dependent FMN reductase 3 143 3.0E-14 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SDY_0980 d9039b4867634d1b7f65acf32532c507 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 7.3E-106 T 21-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SDY_0980 d9039b4867634d1b7f65acf32532c507 198 PANTHER PTHR30546 1 197 8.2E-140 T 21-04-2016 SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 PANTHER PTHR33209 2 346 2.2E-226 T 21-04-2016 SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 Pfam PF01343 Peptidase family S49 158 307 5.4E-51 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 SUPERFAMILY SSF52096 237 296 6.64E-33 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 SUPERFAMILY SSF52096 97 206 6.64E-33 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 PANTHER PTHR33209:SF2 2 346 2.2E-226 T 21-04-2016 SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 Pfam PF08496 Peptidase family S49 N-terminal 2 155 7.7E-60 T 21-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 Gene3D G3DSA:3.90.226.10 268 303 8.5E-37 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1342 2aa605f9f44e86932bf1554a01d80fb4 346 Gene3D G3DSA:3.90.226.10 95 202 8.5E-37 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2714 54fef7552ef7599096562610b89c5009 143 SUPERFAMILY SSF54919 1 141 2.1E-58 T 21-04-2016 SDY_2714 54fef7552ef7599096562610b89c5009 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 21-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PANTHER PTHR11349 1 143 3.1E-77 T 21-04-2016 SDY_2714 54fef7552ef7599096562610b89c5009 143 Gene3D G3DSA:3.30.70.141 1 140 1.0E-58 T 21-04-2016 SDY_2714 54fef7552ef7599096562610b89c5009 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.685 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 SMART SM00562 3 140 3.0E-86 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.5E-54 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.1E-40 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.1E-40 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.1E-40 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.1E-40 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2714 54fef7552ef7599096562610b89c5009 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.1E-40 T 21-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946 240 571 0.0 T 21-04-2016 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946 614 859 0.0 T 21-04-2016 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946 1 206 0.0 T 21-04-2016 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Gene3D G3DSA:1.10.730.10 648 795 2.5E-45 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 4.0E-79 T 21-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 SUPERFAMILY SSF50677 226 415 1.15E-57 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 7.0E-17 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Gene3D G3DSA:3.90.740.10 223 424 7.8E-62 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.307 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946:SF7 240 571 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946:SF7 614 859 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 PANTHER PTHR11946:SF7 1 206 0.0 T 21-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 SUPERFAMILY SSF47323 662 859 5.05E-38 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 SUPERFAMILY SSF52374 416 668 7.65E-141 T 21-04-2016 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 SUPERFAMILY SSF52374 5 226 7.65E-141 T 21-04-2016 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 651 1.2E-6 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 6.1E-26 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 3.0E-7 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Gene3D G3DSA:3.40.50.620 618 647 2.7E-151 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Gene3D G3DSA:3.40.50.620 425 573 2.7E-151 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0564 d40536d4a63993a060fbda802c7e3ede 860 Gene3D G3DSA:3.40.50.620 4 222 2.7E-151 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0847 26be6e2a6a71b643fde00a78342295f3 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0847 26be6e2a6a71b643fde00a78342295f3 237 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_0847 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0847 26be6e2a6a71b643fde00a78342295f3 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0847 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_4469 26be6e2a6a71b643fde00a78342295f3 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4469 26be6e2a6a71b643fde00a78342295f3 237 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_4469 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4469 26be6e2a6a71b643fde00a78342295f3 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4469 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_4485 26be6e2a6a71b643fde00a78342295f3 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4485 26be6e2a6a71b643fde00a78342295f3 237 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_4485 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4485 26be6e2a6a71b643fde00a78342295f3 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4485 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0536 26be6e2a6a71b643fde00a78342295f3 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0536 26be6e2a6a71b643fde00a78342295f3 237 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_0536 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0536 26be6e2a6a71b643fde00a78342295f3 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0536 26be6e2a6a71b643fde00a78342295f3 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_3384 261ff6da90a7a3f692be0c00dde3dae7 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.9E-37 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_3384 261ff6da90a7a3f692be0c00dde3dae7 95 SUPERFAMILY SSF69754 1 95 8.11E-33 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_3384 261ff6da90a7a3f692be0c00dde3dae7 95 Gene3D G3DSA:3.30.160.100 1 95 3.7E-37 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_3384 261ff6da90a7a3f692be0c00dde3dae7 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.7E-27 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_3384 261ff6da90a7a3f692be0c00dde3dae7 95 PANTHER PTHR33231 1 95 8.8E-41 T 21-04-2016 SDY_0175 0e6003b175c65911bc68fb215270015c 232 Gene3D G3DSA:3.40.50.1580 1 229 4.2E-77 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_0175 0e6003b175c65911bc68fb215270015c 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.921 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SDY_0175 0e6003b175c65911bc68fb215270015c 232 PANTHER PTHR21234:SF16 1 229 4.5E-61 T 21-04-2016 SDY_0175 0e6003b175c65911bc68fb215270015c 232 PANTHER PTHR21234 1 229 4.5E-61 T 21-04-2016 IPR018017 Nucleoside phosphorylase SDY_0175 0e6003b175c65911bc68fb215270015c 232 SUPERFAMILY SSF53167 1 229 4.32E-75 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_0175 0e6003b175c65911bc68fb215270015c 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 9.6E-138 T 21-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SDY_0175 0e6003b175c65911bc68fb215270015c 232 Pfam PF01048 Phosphorylase superfamily 2 226 6.2E-49 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_0521 a40a5acab6b3d20f17978e2dbb45f80a 334 PANTHER PTHR30472:SF31 6 334 4.0E-173 T 21-04-2016 SDY_0521 a40a5acab6b3d20f17978e2dbb45f80a 334 Pfam PF01032 FecCD transport family 19 328 6.5E-90 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0521 a40a5acab6b3d20f17978e2dbb45f80a 334 PANTHER PTHR30472 6 334 4.0E-173 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0521 a40a5acab6b3d20f17978e2dbb45f80a 334 Gene3D G3DSA:1.10.3470.10 10 331 7.7E-97 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0521 a40a5acab6b3d20f17978e2dbb45f80a 334 SUPERFAMILY SSF81345 9 328 7.85E-75 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1884 4f582667c406ba8186742623c17d061a 341 SUPERFAMILY SSF53822 60 340 2.16E-94 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_1884 4f582667c406ba8186742623c17d061a 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1884 4f582667c406ba8186742623c17d061a 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-19 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1884 4f582667c406ba8186742623c17d061a 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1884 4f582667c406ba8186742623c17d061a 341 SMART SM00354 1 71 3.0E-37 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1884 4f582667c406ba8186742623c17d061a 341 Gene3D G3DSA:1.10.260.40 2 60 7.9E-24 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1884 4f582667c406ba8186742623c17d061a 341 Gene3D G3DSA:3.40.50.2300 61 170 1.4E-33 T 21-04-2016 SDY_1884 4f582667c406ba8186742623c17d061a 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1884 4f582667c406ba8186742623c17d061a 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1884 4f582667c406ba8186742623c17d061a 341 Gene3D G3DSA:3.40.50.2300 171 332 1.6E-62 T 21-04-2016 SDY_1884 4f582667c406ba8186742623c17d061a 341 PANTHER PTHR30146 1 340 4.4E-163 T 21-04-2016 SDY_1884 4f582667c406ba8186742623c17d061a 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.4E-40 T 21-04-2016 SDY_1884 4f582667c406ba8186742623c17d061a 341 PANTHER PTHR30146:SF30 1 340 4.4E-163 T 21-04-2016 SDY_1884 4f582667c406ba8186742623c17d061a 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.752 T 21-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 Gene3D G3DSA:3.40.50.7700 4 163 2.7E-75 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 SUPERFAMILY SSF52255 7 165 1.96E-67 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 1.4E-66 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 Pfam PF00731 AIR carboxylase 9 157 4.4E-64 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 SMART SM01001 8 159 1.3E-103 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 PANTHER PTHR23046:SF2 4 166 1.2E-90 T 21-04-2016 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 PIRSF PIRSF001338 5 166 2.0E-67 T 21-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 PANTHER PTHR23046 4 166 1.2E-90 T 21-04-2016 SDY_0275 bc597d096b584dc01ce96a347c7fd5ae 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.506 T 21-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 SMART SM00986 49 210 6.6E-42 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.9E-28 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 PANTHER PTHR11264:SF10 1 229 6.6E-179 T 21-04-2016 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 5.9E-91 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 SUPERFAMILY SSF52141 6 220 3.92E-96 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 PANTHER PTHR11264 1 229 6.6E-179 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 Gene3D G3DSA:3.40.470.10 6 221 2.7E-102 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 21-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.536 T 21-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SDY_2823 baabb07e7fc996ab91f80114230de1b3 229 SMART SM00987 49 210 6.6E-42 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 Gene3D G3DSA:3.40.50.2000 168 344 3.3E-55 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 8.7E-172 T 21-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 Gene3D G3DSA:3.40.50.2000 1 147 3.8E-59 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 PANTHER PTHR30160 1 347 1.9E-121 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 PANTHER PTHR30160:SF7 1 347 1.9E-121 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 SUPERFAMILY SSF53756 1 343 7.33E-102 T 21-04-2016 SDY_4052 c06eb074ad8381e36e1846f5c56d7b2c 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.9E-91 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SDY_3009 fa4df09a3a11214d4f2a7b6a27f7d786 109 Gene3D G3DSA:1.20.1440.40 1 104 8.3E-42 T 21-04-2016 IPR023376 YqcC-like domain SDY_3009 fa4df09a3a11214d4f2a7b6a27f7d786 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 1.8E-33 T 21-04-2016 IPR023376 YqcC-like domain SDY_3009 fa4df09a3a11214d4f2a7b6a27f7d786 109 PANTHER PTHR39586 2 109 4.5E-46 T 21-04-2016 SDY_3009 fa4df09a3a11214d4f2a7b6a27f7d786 109 PIRSF PIRSF006257 1 108 2.1E-41 T 21-04-2016 IPR007384 Protein of unknown function UCP006257 SDY_3009 fa4df09a3a11214d4f2a7b6a27f7d786 109 SUPERFAMILY SSF158452 1 107 1.83E-36 T 21-04-2016 IPR023376 YqcC-like domain SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Gene3D G3DSA:3.40.50.980 36 191 6.1E-26 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 SUPERFAMILY SSF56801 5 532 6.15E-124 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Gene3D G3DSA:2.30.38.10 360 430 1.2E-21 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Gene3D G3DSA:3.30.300.30 432 533 3.3E-26 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 1.3E-282 T 21-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Pfam PF00501 AMP-binding enzyme 37 437 1.2E-75 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 2.0E-11 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 PANTHER PTHR24095:SF123 7 533 3.2E-286 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 PANTHER PTHR24095 7 533 3.2E-286 T 21-04-2016 SDY_0525 6e5ee38ef6a34a57ffeef1fc5a18887a 536 Gene3D G3DSA:3.40.50.980 192 349 8.9E-33 T 21-04-2016 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 PANTHER PTHR13420 6 94 1.4E-28 T 21-04-2016 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.287 T 21-04-2016 IPR003746 Protein of unknown function DUF167 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 SMART SM01152 7 83 7.1E-37 T 21-04-2016 IPR003746 Protein of unknown function DUF167 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.2E-24 T 21-04-2016 IPR003746 Protein of unknown function DUF167 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 Gene3D G3DSA:3.30.1200.10 2 91 2.9E-30 T 21-04-2016 IPR003746 Protein of unknown function DUF167 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 SUPERFAMILY SSF69786 2 95 2.22E-32 T 21-04-2016 IPR003746 Protein of unknown function DUF167 SDY_3119 a3ffcf40a3b14ab620090e2227d1e56c 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 1.5E-34 T 21-04-2016 IPR005228 Conserved hypothetical protein CHP00251 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:1.10.1390.10 511 548 6.8E-23 T 21-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 21-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Pfam PF00342 Phosphoglucose isomerase 52 541 8.8E-259 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 21-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.96E-55 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.344 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PANTHER PTHR11469:SF11 1 549 0.0 T 21-04-2016 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 99 290 1.1E-92 T 21-04-2016 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 293 510 6.7E-149 T 21-04-2016 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 8 98 6.7E-149 T 21-04-2016 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 PANTHER PTHR11469 1 549 0.0 T 21-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_4226 b27dd7db316ffeb6a91464fc033cd01c 549 SUPERFAMILY SSF53697 5 548 1.33E-229 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 Gene3D G3DSA:3.40.190.10 92 188 6.0E-16 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 SMART SM00062 1 229 4.0E-57 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_3445 e4063f438e53584928945614d80579c3 305 PANTHER PTHR30085:SF5 1 274 1.6E-179 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 23 36 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_3445 e4063f438e53584928945614d80579c3 305 Gene3D G3DSA:3.40.190.10 189 215 4.8E-19 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 Gene3D G3DSA:3.40.190.10 2 91 4.8E-19 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 PANTHER PTHR30085 1 274 1.6E-179 T 21-04-2016 SDY_3445 e4063f438e53584928945614d80579c3 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 1 217 2.0E-32 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_3445 e4063f438e53584928945614d80579c3 305 SUPERFAMILY SSF53850 1 220 5.98E-46 T 21-04-2016 SDY_4088 722995158ee84b1c9e96c264943c9067 143 SUPERFAMILY SSF117125 37 143 6.41E-35 T 21-04-2016 SDY_4088 722995158ee84b1c9e96c264943c9067 143 PANTHER PTHR22762 10 55 6.0E-30 T 21-04-2016 SDY_4088 722995158ee84b1c9e96c264943c9067 143 PANTHER PTHR22762:SF88 10 55 6.0E-30 T 21-04-2016 SDY_2894 79db32659b3cb72093e59bc25d020db4 166 Gene3D G3DSA:1.10.10.10 116 165 1.0E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2894 79db32659b3cb72093e59bc25d020db4 166 Gene3D G3DSA:1.10.10.10 13 69 7.4E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2894 79db32659b3cb72093e59bc25d020db4 166 Hamap MF_01114 Regulatory protein RecX [recX]. 6 166 13.352 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SDY_2894 79db32659b3cb72093e59bc25d020db4 166 PANTHER PTHR33602 10 166 4.2E-48 T 21-04-2016 SDY_2894 79db32659b3cb72093e59bc25d020db4 166 PANTHER PTHR33602:SF1 10 166 4.2E-48 T 21-04-2016 SDY_2894 79db32659b3cb72093e59bc25d020db4 166 Pfam PF02631 RecX family 50 162 3.6E-30 T 21-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SDY_2894 79db32659b3cb72093e59bc25d020db4 166 Gene3D G3DSA:1.10.10.10 70 115 4.3E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SUPERFAMILY SSF54631 94 203 6.57E-24 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 PIRSF PIRSF000130 1 487 1.0E-196 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 PANTHER PTHR11911:SF6 1 281 1.9E-250 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 PANTHER PTHR11911:SF6 299 485 1.9E-250 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.299 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 21-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.0E-200 T 21-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 PANTHER PTHR11911 1 281 1.9E-250 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 PANTHER PTHR11911 299 485 1.9E-250 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SMART SM01240 7 473 0.0 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 Gene3D G3DSA:3.20.20.70 2 485 1.2E-193 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SMART SM00116 158 206 1.9E-8 T 21-04-2016 IPR000644 CBS domain SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SMART SM00116 96 144 4.6E-9 T 21-04-2016 IPR000644 CBS domain SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.0E-162 T 21-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SUPERFAMILY SSF51412 217 477 1.09E-127 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 SUPERFAMILY SSF51412 1 90 1.09E-127 T 21-04-2016 SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 Pfam PF00571 CBS domain 153 202 1.7E-4 T 21-04-2016 IPR000644 CBS domain SDY_2704 6e7e8f1a1d9eafa699fb5498d4b405e5 488 Pfam PF00571 CBS domain 95 140 2.3E-8 T 21-04-2016 IPR000644 CBS domain SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 Gene3D G3DSA:3.10.129.10 125 284 3.2E-56 T 21-04-2016 IPR029069 HotDog domain SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 Pfam PF13622 Thioesterase-like superfamily 32 282 8.7E-58 T 21-04-2016 SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 SUPERFAMILY SSF54637 6 114 3.54E-42 T 21-04-2016 IPR029069 HotDog domain SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 PANTHER PTHR11066:SF34 1 283 1.3E-117 T 21-04-2016 SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 Gene3D G3DSA:3.10.129.10 4 116 5.3E-50 T 21-04-2016 IPR029069 HotDog domain SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 SUPERFAMILY SSF54637 116 284 5.1E-58 T 21-04-2016 IPR029069 HotDog domain SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 5.2E-105 T 21-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SDY_0389 8001f459dfa7cb70f5e6848a388076e9 286 PANTHER PTHR11066 1 283 1.3E-117 T 21-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 SUPERFAMILY SSF51735 1 179 5.34E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.297 T 21-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.5E-54 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 Gene3D G3DSA:3.40.50.720 1 163 6.4E-67 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 7.1E-199 T 21-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PIRSF PIRSF000149 1 338 5.0E-135 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 SMART SM00846 3 155 3.5E-83 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 21-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 2.4E-54 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PANTHER PTHR10836:SF47 1 339 1.4E-255 T 21-04-2016 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 Gene3D G3DSA:3.30.360.10 164 318 2.5E-61 T 21-04-2016 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.4E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.4E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.4E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.4E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.4E-30 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 PANTHER PTHR10836 1 339 1.4E-255 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_3155 3f5aab5195eb505ddd5745cd484c6943 339 SUPERFAMILY SSF55347 155 317 1.4E-57 T 21-04-2016 SDY_1063 5d130a2446b2e1f7ede0779a3a0deaa3 261 SUPERFAMILY SSF53098 65 229 1.67E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1063 5d130a2446b2e1f7ede0779a3a0deaa3 261 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_1063 5d130a2446b2e1f7ede0779a3a0deaa3 261 Pfam PF13276 HTH-like domain 5 47 4.4E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_1063 5d130a2446b2e1f7ede0779a3a0deaa3 261 Gene3D G3DSA:3.30.420.10 66 226 1.2E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1063 5d130a2446b2e1f7ede0779a3a0deaa3 261 Pfam PF00665 Integrase core domain 72 186 2.5E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1196 c649791d260827939cd3805385b789e4 108 SUPERFAMILY SSF46689 9 101 1.36E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1196 c649791d260827939cd3805385b789e4 108 Pfam PF01527 Transposase 10 82 5.3E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1196 c649791d260827939cd3805385b789e4 108 PANTHER PTHR33215:SF4 9 108 1.5E-61 T 21-04-2016 SDY_1196 c649791d260827939cd3805385b789e4 108 Gene3D G3DSA:1.10.10.60 15 98 3.3E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1196 c649791d260827939cd3805385b789e4 108 PANTHER PTHR33215 9 108 1.5E-61 T 21-04-2016 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.1E-86 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 Gene3D G3DSA:3.20.130.10 348 537 2.6E-76 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 Pfam PF05683 Fumarase C-terminus 332 537 1.4E-94 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 PANTHER PTHR30389:SF6 2 548 0.0 T 21-04-2016 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 PANTHER PTHR30389 2 548 0.0 T 21-04-2016 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 7.9E-31 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 SUPERFAMILY SSF117457 361 536 3.14E-62 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 PIRSF PIRSF001394 30 548 1.3E-238 T 21-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.0E-62 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_1828 d17a3a6a273e0f8642b15d5a7670c1e1 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 Gene3D G3DSA:1.20.1250.20 21 224 1.1E-54 T 21-04-2016 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 PANTHER PTHR11662:SF141 1 450 2.2E-244 T 21-04-2016 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 Pfam PF07690 Major Facilitator Superfamily 34 400 1.0E-44 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 Gene3D G3DSA:1.20.1250.20 246 448 7.8E-48 T 21-04-2016 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 4.7E-170 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 PANTHER PTHR11662 1 450 2.2E-244 T 21-04-2016 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 7.1E-270 T 21-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 PIRSF PIRSF002808 5 452 6.7E-177 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 SDY_2435 0a31bd12ab28711a568dd0b514922c4c 452 SUPERFAMILY SSF103473 17 443 4.05E-84 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Gene3D G3DSA:1.20.1270.130 291 371 5.6E-38 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Gene3D G3DSA:3.80.10.10 60 288 1.9E-33 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Pfam PF12468 Type III secretion system leucine rich repeat protein 5 51 3.0E-12 T 21-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Gene3D G3DSA:1.20.58.90 506 578 3.7E-37 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 PANTHER PTHR24365 64 256 6.9E-14 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 PANTHER PTHR24365 483 495 6.9E-14 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SUPERFAMILY SSF52058 51 267 3.4E-33 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Gene3D G3DSA:1.20.58.360 372 505 6.9E-58 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 138 157 0.0051 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 158 177 4.0 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 178 197 46.0 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 78 97 15.0 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 118 137 0.0098 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 58 77 72.0 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 SMART SM00364 98 117 1.3E-4 T 21-04-2016 SDY_2003 5fcdd96604d3950c4cb035d7de960622 583 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 301 509 1.3E-71 T 21-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_3792 6b480094d31f36fb311bddca922ca912 383 SUPERFAMILY SSF55031 181 295 5.38E-21 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_3792 6b480094d31f36fb311bddca922ca912 383 PANTHER PTHR11014 7 381 3.6E-234 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 Pfam PF07687 Peptidase dimerisation domain 178 288 2.7E-25 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_3792 6b480094d31f36fb311bddca922ca912 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_3792 6b480094d31f36fb311bddca922ca912 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_3792 6b480094d31f36fb311bddca922ca912 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.2E-173 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 SDY_3792 6b480094d31f36fb311bddca922ca912 383 Gene3D G3DSA:3.30.70.360 190 290 2.8E-26 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_3792 6b480094d31f36fb311bddca922ca912 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 67.962 T 21-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 SDY_3792 6b480094d31f36fb311bddca922ca912 383 PANTHER PTHR11014:SF75 7 381 3.6E-234 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 SUPERFAMILY SSF53187 305 381 3.14E-59 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 SUPERFAMILY SSF53187 5 180 3.14E-59 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 Gene3D G3DSA:3.40.630.10 323 381 1.9E-63 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 Gene3D G3DSA:3.40.630.10 5 189 1.9E-63 T 21-04-2016 SDY_3792 6b480094d31f36fb311bddca922ca912 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 2.0E-33 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SDY_0369 7968d0737be07ef472730ce5231f8e2e 406 SUPERFAMILY SSF90123 78 389 6.77E-9 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0369 7968d0737be07ef472730ce5231f8e2e 406 PANTHER PTHR11384 71 404 2.7E-45 T 21-04-2016 SDY_0369 7968d0737be07ef472730ce5231f8e2e 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.4E-166 T 21-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 SDY_0369 7968d0737be07ef472730ce5231f8e2e 406 PANTHER PTHR11384:SF3 71 404 2.7E-45 T 21-04-2016 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Gene3D G3DSA:2.40.50.140 1 114 2.9E-50 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 21-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 SMART SM01383 42 118 1.9E-48 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 PANTHER PTHR13691 1 273 6.8E-149 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Gene3D G3DSA:2.30.30.30 119 195 2.4E-34 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 8.5E-56 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 SUPERFAMILY SSF50104 126 269 1.44E-59 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 SUPERFAMILY SSF50249 4 125 1.34E-49 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 272 5.7E-132 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 21-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.977 T 21-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 SMART SM01382 124 251 7.5E-90 T 21-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 PIRSF PIRSF002158 12 273 1.1E-100 T 21-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3493 35830da549dc43fa7a7f88b82da4f10d 273 Gene3D G3DSA:4.10.950.10 196 272 1.8E-34 T 21-04-2016 IPR014726 Ribosomal protein L2, domain 3 SDY_2405 8e58f427ca07769142149c9785f71028 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_2405 8e58f427ca07769142149c9785f71028 243 PANTHER PTHR18966 20 243 2.6E-172 T 21-04-2016 SDY_2405 8e58f427ca07769142149c9785f71028 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 1.6E-92 T 21-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 SDY_2405 8e58f427ca07769142149c9785f71028 243 Gene3D G3DSA:3.40.190.10 203 242 9.3E-45 T 21-04-2016 SDY_2405 8e58f427ca07769142149c9785f71028 243 Gene3D G3DSA:3.40.190.10 20 108 9.3E-45 T 21-04-2016 SDY_2405 8e58f427ca07769142149c9785f71028 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 2.0E-67 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2405 8e58f427ca07769142149c9785f71028 243 SMART SM00062 22 243 1.3E-85 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2405 8e58f427ca07769142149c9785f71028 243 SUPERFAMILY SSF53850 1 242 6.44E-72 T 21-04-2016 SDY_2405 8e58f427ca07769142149c9785f71028 243 PANTHER PTHR18966:SF194 20 243 2.6E-172 T 21-04-2016 SDY_2405 8e58f427ca07769142149c9785f71028 243 SMART SM00079 22 243 6.1E-4 T 21-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SDY_2405 8e58f427ca07769142149c9785f71028 243 Gene3D G3DSA:3.40.190.10 110 201 1.4E-28 T 21-04-2016 SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 SUPERFAMILY SSF55804 9 155 1.57E-42 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 Gene3D G3DSA:3.40.930.10 3 157 8.7E-48 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 8.1E-63 T 21-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 7.6E-37 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 PANTHER PTHR30505 3 163 3.1E-88 T 21-04-2016 SDY_3385 caed8afcd6ad09fad364f2d9ddded73d 163 PANTHER PTHR30505:SF6 3 163 3.1E-88 T 21-04-2016 SDY_1797 06fae8bc6a882323282c58129bdf9b9e 277 PANTHER PTHR31756:SF3 1 277 3.2E-131 T 21-04-2016 SDY_1797 06fae8bc6a882323282c58129bdf9b9e 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.949 T 21-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein SDY_1797 06fae8bc6a882323282c58129bdf9b9e 277 PANTHER PTHR31756 1 277 3.2E-131 T 21-04-2016 SDY_1797 06fae8bc6a882323282c58129bdf9b9e 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 4.7E-73 T 21-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 2.5E-37 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Pfam PF02805 Metal binding domain of Ada 11 75 1.0E-31 T 21-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 2.5E-20 T 21-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Gene3D G3DSA:3.30.160.70 175 267 2.5E-33 T 21-04-2016 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 SUPERFAMILY SSF46689 85 133 1.34E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 21-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Gene3D G3DSA:3.40.10.10 3 86 1.9E-36 T 21-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 3.9E-32 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 SUPERFAMILY SSF57884 2 92 4.18E-34 T 21-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Pfam PF12833 Helix-turn-helix domain 105 181 9.8E-16 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 PANTHER PTHR10815:SF9 157 348 5.4E-128 T 21-04-2016 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 PANTHER PTHR10815 157 348 5.4E-128 T 21-04-2016 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 SUPERFAMILY SSF46767 268 348 2.09E-30 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Gene3D G3DSA:1.10.10.60 87 139 6.6E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 SUPERFAMILY SSF53155 187 267 5.49E-20 T 21-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 Gene3D G3DSA:1.10.10.10 268 349 1.3E-33 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 PIRSF PIRSF000409 1 354 6.1E-145 T 21-04-2016 IPR016221 Bifunctional regulatory protein Ada SDY_0863 802c87c3412338ec6db53dce98f1fa93 354 SMART SM00342 99 181 8.9E-22 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 1.6E-136 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 PANTHER PTHR11265:SF0 1 313 6.2E-161 T 21-04-2016 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.463 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 Gene3D G3DSA:3.40.50.150 216 311 4.5E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 Gene3D G3DSA:3.40.50.150 7 110 4.5E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 PANTHER PTHR11265 1 313 6.2E-161 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 PIRSF PIRSF004486 1 312 2.8E-104 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 Gene3D G3DSA:1.10.150.170 112 215 1.9E-38 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 SUPERFAMILY SSF53335 7 113 3.66E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 SUPERFAMILY SSF53335 213 310 3.66E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 SUPERFAMILY SSF81799 114 213 5.62E-36 T 21-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0112 5b5295a184c424e1375f9022a0de4b92 313 Pfam PF01795 MraW methylase family 5 310 2.0E-123 T 21-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 Pfam PF00293 NUDIX domain 8 144 1.2E-17 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PANTHER PTHR22769:SF28 6 148 5.0E-67 T 21-04-2016 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 1.1E-55 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 1.1E-55 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 23 44 1.1E-55 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 1.1E-55 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PRINTS PR01404 DATP pyrophosphohydrolase signature 6 23 1.1E-55 T 21-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 SUPERFAMILY SSF55811 6 144 7.18E-23 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 PANTHER PTHR22769 6 148 5.0E-67 T 21-04-2016 SDY_1152 56999ac6c0e7aee720c54d37165e01e0 150 Gene3D G3DSA:3.90.79.10 3 146 3.0E-28 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 Pfam PF13091 PLD-like domain 214 335 1.8E-24 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 Pfam PF13091 PLD-like domain 26 142 1.5E-14 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 Gene3D G3DSA:3.30.870.10 4 166 9.6E-40 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 Gene3D G3DSA:3.30.870.10 206 361 1.5E-31 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 PANTHER PTHR21248:SF5 1 380 8.8E-121 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 SUPERFAMILY SSF56024 188 358 4.26E-36 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 SUPERFAMILY SSF56024 4 163 1.76E-39 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 SMART SM00155 285 312 10.0 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 SMART SM00155 108 135 1.8E-6 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 PANTHER PTHR21248 1 380 8.8E-121 T 21-04-2016 SDY_0814 5a3ed99f197ad3f826c452fedf5d111e 410 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.601 T 21-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 PANTHER PTHR11732:SF98 2 272 6.1E-114 T 21-04-2016 SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 SUPERFAMILY SSF51430 4 272 9.82E-74 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 Pfam PF00248 Aldo/keto reductase family 17 270 9.5E-53 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 PRINTS PR00069 Aldo-keto reductase signature 97 115 7.4E-18 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 PRINTS PR00069 Aldo-keto reductase signature 205 229 7.4E-18 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 PRINTS PR00069 Aldo-keto reductase signature 127 144 7.4E-18 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 Gene3D G3DSA:3.20.20.100 11 274 1.2E-74 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1486 3a812245fd2ef4e4dd42b95520fa0332 283 PANTHER PTHR11732 2 272 6.1E-114 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 SUPERFAMILY SSF117892 196 233 1.31E-7 T 21-04-2016 IPR001107 Band 7 domain SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 PANTHER PTHR10264 4 156 1.1E-118 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 PANTHER PTHR10264 196 329 1.1E-118 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 PIRSF PIRSF005651 1 334 1.6E-109 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 SMART SM00244 18 227 3.5E-45 T 21-04-2016 IPR001107 Band 7 domain SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 SUPERFAMILY SSF117892 56 157 8.76E-16 T 21-04-2016 IPR001107 Band 7 domain SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 9.3E-149 T 21-04-2016 IPR010200 HflC GO:0016021|GO:0052547 SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 6.1E-34 T 21-04-2016 IPR001107 Band 7 domain SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 PANTHER PTHR10264:SF80 4 156 1.1E-118 T 21-04-2016 SDY_4414 a2e1f0cc20bc4f7ce961e3030c1669c0 334 PANTHER PTHR10264:SF80 196 329 1.1E-118 T 21-04-2016 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:1.10.3500.10 78 290 8.4E-105 T 21-04-2016 IPR023323 Tex-like domain SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:1.10.3500.10 418 465 8.4E-105 T 21-04-2016 IPR023323 Tex-like domain SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Pfam PF09371 Tex-like protein N-terminal domain 1 161 4.9E-60 T 21-04-2016 IPR018974 Tex-like protein, N-terminal SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Pfam PF00575 S1 RNA binding domain 616 687 4.0E-24 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Pfam PF12836 Helix-hairpin-helix motif 458 522 1.4E-28 T 21-04-2016 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SUPERFAMILY SSF47781 437 525 4.67E-28 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:2.40.50.140 601 687 3.7E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SUPERFAMILY SSF53098 290 436 3.34E-48 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 PANTHER PTHR10724 1 699 0.0 T 21-04-2016 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SUPERFAMILY SSF50249 605 689 3.43E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SUPERFAMILY SSF47781 527 599 5.11E-20 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Pfam PF16921 Tex protein YqgF-like domain 295 418 4.6E-50 T 21-04-2016 IPR032639 Tex protein, YqgF-like domain SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:1.10.10.650 1 77 6.4E-34 T 21-04-2016 IPR023319 Tex-like protein, HTH domain SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SUPERFAMILY SSF158832 1 289 1.83E-110 T 21-04-2016 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:3.30.420.140 294 417 1.5E-49 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 Gene3D G3DSA:1.10.150.310 466 597 1.5E-48 T 21-04-2016 IPR023097 Tex RuvX-like domain SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SMART SM00732 294 391 7.1E-33 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 PANTHER PTHR10724:SF1 1 699 0.0 T 21-04-2016 SDY_3669 70cc21670378f0d88dbe5d700cfdef24 740 SMART SM00316 616 687 1.0E-26 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_3548 66f700f00a04e720c4e1845bbc76dfa5 318 PANTHER PTHR30472:SF3 1 318 3.8E-137 T 21-04-2016 SDY_3548 66f700f00a04e720c4e1845bbc76dfa5 318 SUPERFAMILY SSF81345 3 314 2.35E-84 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_3548 66f700f00a04e720c4e1845bbc76dfa5 318 Gene3D G3DSA:1.10.3470.10 2 316 5.9E-105 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_3548 66f700f00a04e720c4e1845bbc76dfa5 318 PANTHER PTHR30472 1 318 3.8E-137 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_3548 66f700f00a04e720c4e1845bbc76dfa5 318 Pfam PF01032 FecCD transport family 5 313 3.1E-94 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 PANTHER PTHR11241 1 150 6.6E-58 T 21-04-2016 SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.516 T 21-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 2.2E-50 T 21-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 Pfam PF00692 dUTPase 16 149 3.5E-45 T 21-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 SUPERFAMILY SSF51283 1 150 1.31E-55 T 21-04-2016 IPR029054 dUTPase-like SDY_4070 a76987c37a122dbb4641f4d5c1679281 151 Gene3D G3DSA:2.70.40.10 5 150 3.4E-53 T 21-04-2016 IPR029054 dUTPase-like SDY_3192 64100ca9c278962469b66a09bf192882 505 Gene3D G3DSA:3.30.930.10 157 500 1.2E-123 T 21-04-2016 SDY_3192 64100ca9c278962469b66a09bf192882 505 PANTHER PTHR22594:SF4 1 503 9.6E-292 T 21-04-2016 SDY_3192 64100ca9c278962469b66a09bf192882 505 PIRSF PIRSF039101 1 505 4.8E-206 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.572 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.4E-239 T 21-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 5.3E-15 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SDY_3192 64100ca9c278962469b66a09bf192882 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.5E-82 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_3192 64100ca9c278962469b66a09bf192882 505 Gene3D G3DSA:2.40.50.140 16 154 6.7E-50 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3192 64100ca9c278962469b66a09bf192882 505 SUPERFAMILY SSF55681 162 502 2.13E-123 T 21-04-2016 SDY_3192 64100ca9c278962469b66a09bf192882 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.1E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.1E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.1E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.1E-39 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_3192 64100ca9c278962469b66a09bf192882 505 SUPERFAMILY SSF50249 13 155 2.69E-48 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3192 64100ca9c278962469b66a09bf192882 505 PANTHER PTHR22594 1 503 9.6E-292 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 PANTHER PTHR22854 2 283 1.1E-145 T 21-04-2016 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 SUPERFAMILY SSF51366 258 451 2.98E-55 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Gene3D G3DSA:3.20.20.70 260 446 9.7E-60 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Gene3D G3DSA:3.20.20.70 2 259 1.1E-104 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.673 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 SUPERFAMILY SSF51366 2 253 2.94E-85 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 28.235 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 4.1E-62 T 21-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 PANTHER PTHR22854:SF2 2 283 1.1E-145 T 21-04-2016 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 2.4E-100 T 21-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SDY_1330 02acb6322f8519df3bf8f9bf72c2fcc5 453 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 21-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.5E-93 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 Gene3D G3DSA:3.20.20.70 1 250 2.0E-102 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.72 T 21-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 21-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 SUPERFAMILY SSF51351 1 248 3.4E-91 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 PANTHER PTHR21139 1 255 7.2E-133 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_3826 37cc44e310531f01ba4bb7cee5d65c85 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.5E-108 T 21-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 Gene3D G3DSA:3.80.30.10 113 280 3.1E-43 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 282 9.7E-119 T 21-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 Gene3D G3DSA:3.30.70.20 44 96 3.4E-11 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 Pfam PF04055 Radical SAM superfamily 27 232 1.5E-24 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 PANTHER PTHR30352 7 60 2.8E-137 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 PANTHER PTHR30352 93 281 2.8E-137 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 PIRSF PIRSF000371 1 287 8.8E-95 T 21-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 SUPERFAMILY SSF54862 12 115 1.3E-12 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 SUPERFAMILY SSF102114 85 271 1.26E-13 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 PANTHER PTHR30352:SF13 7 60 2.8E-137 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 PANTHER PTHR30352:SF13 93 281 2.8E-137 T 21-04-2016 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SDY_4639 95444495ac6c3280b5ff92767dd82c56 287 Pfam PF13353 4Fe-4S single cluster domain 17 169 2.9E-9 T 21-04-2016 SDY_1269 04a2ee16744fe2b52290f8ce9c2ab392 76 SUPERFAMILY SSF140376 2 75 9.29E-29 T 21-04-2016 SDY_1269 04a2ee16744fe2b52290f8ce9c2ab392 76 Pfam PF06150 ChaB 9 75 9.6E-28 T 21-04-2016 IPR009317 ChaB SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 SMART SM00382 30 230 6.6E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 SUPERFAMILY SSF52540 4 253 8.04E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 PANTHER PTHR24220 128 254 2.3E-127 T 21-04-2016 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 PANTHER PTHR24220 7 112 2.3E-127 T 21-04-2016 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.0E-5 T 21-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 Pfam PF00005 ABC transporter 21 181 3.0E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 PANTHER PTHR24220:SF358 128 254 2.3E-127 T 21-04-2016 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 PANTHER PTHR24220:SF358 7 112 2.3E-127 T 21-04-2016 SDY_3604 ad00be0f6b6fb48ddb7e737cea6b5dbe 255 Gene3D G3DSA:3.40.50.300 2 251 3.9E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Gene3D G3DSA:1.10.8.10 157 200 7.3E-23 T 21-04-2016 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Pfam PF01330 RuvA N terminal domain 2 62 4.3E-20 T 21-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.4E-16 T 21-04-2016 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 PANTHER PTHR33796 2 201 2.1E-82 T 21-04-2016 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 2.4E-74 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Pfam PF07499 RuvA, C-terminal domain 159 201 4.1E-15 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 SUPERFAMILY SSF47781 66 137 9.18E-22 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Gene3D G3DSA:1.10.150.20 67 138 3.2E-31 T 21-04-2016 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 SUPERFAMILY SSF46929 157 201 7.85E-11 T 21-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Gene3D G3DSA:2.40.50.140 2 64 1.5E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1148 0c47888d46d278da0594cbc0431a3149 203 SMART SM00278 73 92 1.3 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 SMART SM00278 108 127 0.05 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.82 T 21-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SDY_1148 0c47888d46d278da0594cbc0431a3149 203 SUPERFAMILY SSF50249 2 63 7.42E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 PANTHER PTHR37486:SF1 2 165 3.6E-92 T 21-04-2016 SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 PANTHER PTHR37486 2 165 3.6E-92 T 21-04-2016 SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 SUPERFAMILY SSF101738 4 119 1.83E-48 T 21-04-2016 IPR007481 Stringent starvation protein B SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 Gene3D G3DSA:2.30.30.220 4 111 8.0E-52 T 21-04-2016 IPR007481 Stringent starvation protein B SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 Pfam PF04386 Stringent starvation protein B 9 165 3.9E-44 T 21-04-2016 IPR007481 Stringent starvation protein B SDY_3404 85051615dd059ba6406ba6f72e5d4556 165 PIRSF PIRSF005276 3 165 9.3E-61 T 21-04-2016 IPR007481 Stringent starvation protein B SDY_4534 3b188c398a3baedb4551e575bd27bb0b 290 Pfam PF01040 UbiA prenyltransferase family 28 271 1.9E-68 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SDY_4534 3b188c398a3baedb4551e575bd27bb0b 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 21-04-2016 IPR030470 UbiA prenyltransferase conserved site SDY_4534 3b188c398a3baedb4551e575bd27bb0b 290 PANTHER PTHR11048 9 289 2.1E-92 T 21-04-2016 SDY_4534 3b188c398a3baedb4551e575bd27bb0b 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.375 T 21-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 SDY_4534 3b188c398a3baedb4551e575bd27bb0b 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 4.1E-112 T 21-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.40.50.300 28 269 2.0E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF54752 272 327 4.58E-21 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.30.250.10 272 328 5.4E-28 T 21-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF52540 6 269 6.57E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 245 274 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 299 316 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 95 124 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 212 240 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 167 196 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 129 158 4.8E-84 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 SMART SM00382 59 230 4.5E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 Hamap MF_00268 Protein RecA [recA]. 7 331 50.992 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.0E-173 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 1.9E-142 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 ProSitePatterns PS00321 recA signature. 215 223 - T 21-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PANTHER PTHR22942:SF1 1 337 4.0E-206 T 21-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SDY_2895 ff9f96d7f45619daca23a25a01e0c64d 353 PANTHER PTHR22942 1 337 4.0E-206 T 21-04-2016 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 SUPERFAMILY SSF47240 1 154 4.06E-54 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PANTHER PTHR30295 1 154 7.1E-54 T 21-04-2016 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 107 127 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 3 22 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 23 43 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 86 106 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 128 149 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 65 85 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PRINTS PR00601 Bacterioferritin signature 44 64 6.8E-77 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.0E-80 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PANTHER PTHR30295:SF9 1 154 7.1E-54 T 21-04-2016 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 Gene3D G3DSA:1.20.1260.10 1 155 1.1E-65 T 21-04-2016 IPR012347 Ferritin-related SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 Pfam PF00210 Ferritin-like domain 8 143 3.5E-39 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SDY_3498 f3d3fd914fa434aa8872f13db3e0cfcb 158 PIRSF PIRSF002560 1 157 5.1E-71 T 21-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 1.9E-303 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.9E-60 T 21-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 Pfam PF01578 Cytochrome C assembly protein 89 296 1.6E-54 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 4.0E-121 T 21-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 9.0E-96 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PANTHER PTHR30009 1 418 0.0 T 21-04-2016 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PANTHER PTHR30009 463 647 0.0 T 21-04-2016 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PANTHER PTHR30009:SF0 1 418 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0882 89348c76cca311d1e248bfc0aee21251 647 PANTHER PTHR30009:SF0 463 647 0.0 T 21-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_1965 5be42c93fc2909647ba67fd490c516cb 286 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 14 284 3.2E-150 T 21-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 SDY_1965 5be42c93fc2909647ba67fd490c516cb 286 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 15 284 2.6E-111 T 21-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SDY_1965 5be42c93fc2909647ba67fd490c516cb 286 PANTHER PTHR32502:SF5 1 286 2.1E-184 T 21-04-2016 SDY_1965 5be42c93fc2909647ba67fd490c516cb 286 PANTHER PTHR32502 1 286 2.1E-184 T 21-04-2016 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 Pfam PF07690 Major Facilitator Superfamily 21 356 1.1E-36 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 Gene3D G3DSA:1.20.1250.20 19 199 9.6E-19 T 21-04-2016 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 Gene3D G3DSA:1.20.1250.20 213 391 6.4E-25 T 21-04-2016 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 SUPERFAMILY SSF103473 19 390 4.32E-51 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 PANTHER PTHR23535 4 392 2.2E-224 T 21-04-2016 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 5.6E-196 T 21-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 SDY_0909 e2946bc613da43c6352f798cf4c41a6a 393 PANTHER PTHR23535:SF2 4 392 2.2E-224 T 21-04-2016 SDY_0245 6452c19016eed117783c246e740e0180 256 PANTHER PTHR23088:SF28 1 256 8.2E-165 T 21-04-2016 SDY_0245 6452c19016eed117783c246e740e0180 256 SUPERFAMILY SSF56317 4 249 5.89E-60 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_0245 6452c19016eed117783c246e740e0180 256 Gene3D G3DSA:3.60.110.10 4 251 1.4E-58 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_0245 6452c19016eed117783c246e740e0180 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 7.3E-32 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_0245 6452c19016eed117783c246e740e0180 256 PANTHER PTHR23088 1 256 8.2E-165 T 21-04-2016 SDY_0245 6452c19016eed117783c246e740e0180 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 21-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site SDY_3853 75b8103c95fdbe2c3494122d80a1953c 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3853 75b8103c95fdbe2c3494122d80a1953c 125 PANTHER PTHR33293 1 124 6.3E-43 T 21-04-2016 SDY_2467 75b8103c95fdbe2c3494122d80a1953c 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2467 75b8103c95fdbe2c3494122d80a1953c 125 PANTHER PTHR33293 1 124 6.3E-43 T 21-04-2016 SDY_1934a 75b8103c95fdbe2c3494122d80a1953c 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1934a 75b8103c95fdbe2c3494122d80a1953c 125 PANTHER PTHR33293 1 124 6.3E-43 T 21-04-2016 SDY_3827 75b8103c95fdbe2c3494122d80a1953c 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3827 75b8103c95fdbe2c3494122d80a1953c 125 PANTHER PTHR33293 1 124 6.3E-43 T 21-04-2016 SDY_1182 75b8103c95fdbe2c3494122d80a1953c 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1182 75b8103c95fdbe2c3494122d80a1953c 125 PANTHER PTHR33293 1 124 6.3E-43 T 21-04-2016 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 Gene3D G3DSA:2.60.40.10 7 148 1.0E-54 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 Gene3D G3DSA:3.20.20.80 149 566 2.2E-107 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 SUPERFAMILY SSF81296 7 144 1.38E-46 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 75.963 T 21-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 PANTHER PTHR10357:SF152 1 630 0.0 T 21-04-2016 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 Pfam PF00128 Alpha amylase, catalytic domain 185 269 9.0E-7 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 SUPERFAMILY SSF51445 130 463 5.09E-126 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 SUPERFAMILY SSF51445 492 564 5.09E-126 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 629 4.2E-269 T 21-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 2.9E-20 T 21-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 PANTHER PTHR10357 1 630 0.0 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_3577 4e55b7e0bbcb517f7f980406d2baf1c2 657 SMART SM00642 130 558 7.5E-8 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF04539 Sigma-70 region 3 458 533 3.4E-29 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PANTHER PTHR30603 1 150 4.2E-255 T 21-04-2016 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PANTHER PTHR30603 326 612 4.2E-255 T 21-04-2016 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PANTHER PTHR30603:SF0 1 150 4.2E-255 T 21-04-2016 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PANTHER PTHR30603:SF0 326 612 4.2E-255 T 21-04-2016 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Gene3D G3DSA:1.10.10.10 543 612 1.3E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF04545 Sigma-70, region 4 547 600 8.9E-19 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.8E-30 T 21-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.548 T 21-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Gene3D G3DSA:1.10.601.10 110 448 2.3E-139 T 21-04-2016 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Gene3D G3DSA:1.10.10.10 452 503 1.8E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 21-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.4E-12 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF04546 Sigma-70, non-essential region 137 348 1.6E-74 T 21-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 SUPERFAMILY SSF88946 113 446 1.23E-103 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3251 e36eb7039430a52862d30ea19ffbe046 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 PANTHER PTHR22993:SF15 1 269 6.1E-142 T 21-04-2016 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Gene3D G3DSA:1.10.8.50 130 269 7.5E-52 T 21-04-2016 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 SMART SM01232 129 221 3.8E-50 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 SUPERFAMILY SSF57716 217 269 2.85E-17 T 21-04-2016 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 SMART SM00898 2 115 1.7E-54 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 SUPERFAMILY SSF46946 130 222 3.93E-31 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.626 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 PANTHER PTHR22993 1 269 6.1E-142 T 21-04-2016 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Gene3D G3DSA:3.20.190.10 2 129 2.1E-38 T 21-04-2016 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 SUPERFAMILY SSF81624 2 138 1.01E-44 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.0E-9 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.7E-32 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 21-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.6E-108 T 21-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SDY_4065 5df8fa869cca660ae36e791e8d288430 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.1E-31 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 123 5.3E-65 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 21-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PANTHER PTHR11652 1 116 3.2E-75 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 7.8E-54 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 1.8E-43 T 21-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3503 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4260 ba09508f3c62a27f5406a033d880e974 315 SMART SM00354 4 74 5.3E-33 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.3E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 PANTHER PTHR30146 4 309 1.6E-220 T 21-04-2016 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 SUPERFAMILY SSF53822 63 314 6.52E-60 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_4260 ba09508f3c62a27f5406a033d880e974 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 4.9E-178 T 21-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 SUPERFAMILY SSF47413 3 60 2.13E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 1.3E-18 T 21-04-2016 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 Gene3D G3DSA:1.10.260.40 3 53 4.3E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 Gene3D G3DSA:3.40.50.2300 54 174 2.8E-19 T 21-04-2016 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 Gene3D G3DSA:3.40.50.2300 175 279 4.5E-42 T 21-04-2016 SDY_4260 ba09508f3c62a27f5406a033d880e974 315 PANTHER PTHR30146:SF42 4 309 1.6E-220 T 21-04-2016 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 21-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SDY_2939 913104e911e618c3a8ad567a42f212f6 135 Gene3D G3DSA:1.10.10.10 2 134 1.6E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2939 913104e911e618c3a8ad567a42f212f6 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.1E-9 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.1E-9 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.1E-9 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 Pfam PF01047 MarR family 29 85 9.7E-12 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 SMART SM00347 24 122 3.8E-19 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 PANTHER PTHR33164:SF16 1 133 2.5E-25 T 21-04-2016 SDY_2939 913104e911e618c3a8ad567a42f212f6 135 SUPERFAMILY SSF46785 3 134 2.69E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2939 913104e911e618c3a8ad567a42f212f6 135 PANTHER PTHR33164 1 133 2.5E-25 T 21-04-2016 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 Pfam PF00999 Sodium/hydrogen exchanger family 11 171 2.9E-28 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 Pfam PF00999 Sodium/hydrogen exchanger family 174 309 3.6E-21 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 Pfam PF02254 TrkA-N domain 337 447 2.4E-25 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PANTHER PTHR16254:SF28 1 491 0.0 T 21-04-2016 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 Gene3D G3DSA:3.40.50.720 330 465 1.6E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 SUPERFAMILY SSF51735 336 465 4.09E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PANTHER PTHR16254 1 491 0.0 T 21-04-2016 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PRINTS PR00335 TrkA potassium uptake protein signature 393 403 8.3E-8 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PRINTS PR00335 TrkA potassium uptake protein signature 336 350 8.3E-8 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PRINTS PR00335 TrkA potassium uptake protein signature 353 367 8.3E-8 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_0070 083b436b672f7bf2cc20f576ef9c606d 555 PRINTS PR00335 TrkA potassium uptake protein signature 382 392 8.3E-8 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_1455 747fb0ac685fb9a17ab6f4cf3b550806 285 PANTHER PTHR30477:SF13 1 284 7.2E-134 T 21-04-2016 SDY_1455 747fb0ac685fb9a17ab6f4cf3b550806 285 SUPERFAMILY SSF81345 4 260 4.58E-39 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1455 747fb0ac685fb9a17ab6f4cf3b550806 285 Gene3D G3DSA:1.10.3470.10 62 242 5.8E-11 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1455 747fb0ac685fb9a17ab6f4cf3b550806 285 PANTHER PTHR30477 1 284 7.2E-134 T 21-04-2016 SDY_1455 747fb0ac685fb9a17ab6f4cf3b550806 285 Pfam PF00950 ABC 3 transport family 9 264 1.2E-82 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 PANTHER PTHR10516 86 205 1.1E-65 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 PANTHER PTHR10516 14 60 1.1E-65 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 Gene3D G3DSA:1.10.287.460 2 88 2.2E-25 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 7.5E-23 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 PANTHER PTHR10516:SF320 86 205 1.1E-65 T 21-04-2016 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 PANTHER PTHR10516:SF320 14 60 1.1E-65 T 21-04-2016 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 Gene3D G3DSA:3.10.50.40 89 205 4.3E-51 T 21-04-2016 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.5E-28 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SDY_4377 a4e8a385950b0faf38d6f5e90c2e3bd3 206 SUPERFAMILY SSF54534 8 205 2.95E-56 T 21-04-2016 SDY_0736 61f0846c0eec13f64683ee3fda483947 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site SDY_0736 61f0846c0eec13f64683ee3fda483947 375 PANTHER PTHR11061:SF36 8 374 5.1E-257 T 21-04-2016 SDY_0736 61f0846c0eec13f64683ee3fda483947 375 PANTHER PTHR11061 8 374 5.1E-257 T 21-04-2016 SDY_0736 61f0846c0eec13f64683ee3fda483947 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 368 1.1E-15 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SDY_0736 61f0846c0eec13f64683ee3fda483947 375 SUPERFAMILY SSF53335 3 371 5.28E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0736 61f0846c0eec13f64683ee3fda483947 375 Gene3D G3DSA:3.40.50.150 180 370 8.1E-48 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0736 61f0846c0eec13f64683ee3fda483947 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 78.875 T 21-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 SDY_0736 61f0846c0eec13f64683ee3fda483947 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SDY_0736 61f0846c0eec13f64683ee3fda483947 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 3.7E-219 T 21-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 Pfam PF12368 Rhodanase C-terminal 246 307 9.9E-19 T 21-04-2016 IPR022111 Rhodanase, C-terminal SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 SUPERFAMILY SSF52821 115 271 1.44E-32 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 Gene3D G3DSA:3.40.250.10 117 242 1.2E-37 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 PANTHER PTHR22778:SF21 1 322 4.7E-119 T 21-04-2016 SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 Pfam PF00581 Rhodanese-like domain 138 233 1.2E-13 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 SMART SM00450 136 237 7.5E-25 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.531 T 21-04-2016 IPR020936 Uncharacterised protein family UPF0176 SDY_2292 7e9bbd8fee6d974cae11ee4e922ca9bd 350 PANTHER PTHR22778 1 322 4.7E-119 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 25 144 1.0E-50 T 21-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 SUPERFAMILY SSF141868 402 647 4.97E-73 T 21-04-2016 IPR001633 EAL domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Gene3D G3DSA:3.20.20.450 402 646 1.0E-76 T 21-04-2016 IPR001633 EAL domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Pfam PF00672 HAMP domain 151 221 2.4E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 SMART SM00267 220 387 3.2E-39 T 21-04-2016 IPR000160 GGDEF domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 PANTHER PTHR33121 161 192 1.0E-53 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 PANTHER PTHR33121 348 646 1.0E-53 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Gene3D G3DSA:3.30.70.270 236 393 4.3E-17 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 383 2.2E-11 T 21-04-2016 IPR000160 GGDEF domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 Pfam PF00563 EAL domain 404 637 1.9E-60 T 21-04-2016 IPR001633 EAL domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 SMART SM00052 397 642 7.9E-114 T 21-04-2016 IPR001633 EAL domain SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 PANTHER PTHR33121:SF13 161 192 1.0E-53 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 PANTHER PTHR33121:SF13 348 646 1.0E-53 T 21-04-2016 SDY_4549 e39dbcd81ae9d1e1011605fe1941b123 651 SUPERFAMILY SSF55073 237 389 1.33E-17 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 312 5.9E-12 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Gene3D G3DSA:3.10.20.30 222 319 6.6E-24 T 21-04-2016 IPR012675 Beta-grasp domain SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Gene3D G3DSA:2.40.30.10 5 104 1.6E-31 T 21-04-2016 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PANTHER PTHR19370:SF113 3 245 8.2E-97 T 21-04-2016 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 1.3E-32 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 SUPERFAMILY SSF63380 3 104 4.12E-26 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Gene3D G3DSA:3.40.50.80 110 221 4.6E-29 T 21-04-2016 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 PANTHER PTHR19370 3 245 8.2E-97 T 21-04-2016 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 3.4E-6 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 SUPERFAMILY SSF52343 106 223 6.29E-27 T 21-04-2016 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 SUPERFAMILY SSF54292 218 321 2.36E-23 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SDY_1707 cf7ee7070349c89a894ce74b5019f9b6 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 207 1.9E-8 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_2771 da125b8adcdaeda4ee247555a122a5dd 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2771 da125b8adcdaeda4ee247555a122a5dd 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2771 da125b8adcdaeda4ee247555a122a5dd 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2771 da125b8adcdaeda4ee247555a122a5dd 237 PANTHER PTHR32552 2 235 5.5E-61 T 21-04-2016 SDY_2771 da125b8adcdaeda4ee247555a122a5dd 237 Pfam PF13276 HTH-like domain 5 47 3.7E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0359 da125b8adcdaeda4ee247555a122a5dd 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0359 da125b8adcdaeda4ee247555a122a5dd 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0359 da125b8adcdaeda4ee247555a122a5dd 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0359 da125b8adcdaeda4ee247555a122a5dd 237 PANTHER PTHR32552 2 235 5.5E-61 T 21-04-2016 SDY_0359 da125b8adcdaeda4ee247555a122a5dd 237 Pfam PF13276 HTH-like domain 5 47 3.7E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_2521 3c63e69e339a0809fe2f5eb63a63dcbd 150 SUPERFAMILY SSF103473 5 149 3.79E-23 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2521 3c63e69e339a0809fe2f5eb63a63dcbd 150 PANTHER PTHR23517 3 149 1.0E-97 T 21-04-2016 SDY_2521 3c63e69e339a0809fe2f5eb63a63dcbd 150 Gene3D G3DSA:1.20.1250.20 8 146 4.1E-19 T 21-04-2016 SDY_2521 3c63e69e339a0809fe2f5eb63a63dcbd 150 PANTHER PTHR23517:SF1 3 149 1.0E-97 T 21-04-2016 SDY_2521 3c63e69e339a0809fe2f5eb63a63dcbd 150 Pfam PF07690 Major Facilitator Superfamily 8 148 6.9E-16 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_0900 d37498fdaa003ca0dca43708bb2af03b 341 PANTHER PTHR30325 1 341 2.3E-207 T 21-04-2016 SDY_0900 d37498fdaa003ca0dca43708bb2af03b 341 SUPERFAMILY SSF161098 135 321 5.89E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0900 d37498fdaa003ca0dca43708bb2af03b 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 2.3E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0900 d37498fdaa003ca0dca43708bb2af03b 341 Gene3D G3DSA:1.10.3720.10 134 337 9.6E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0900 d37498fdaa003ca0dca43708bb2af03b 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 7.2E-6 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031 299 603 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031 655 690 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031 268 282 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 1.9E-18 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SUPERFAMILY SSF52540 292 342 1.27E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Gene3D G3DSA:1.10.150.20 5 37 2.7E-4 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.1E-251 T 21-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Gene3D G3DSA:3.40.50.300 454 638 7.5E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SUPERFAMILY SSF50249 9 176 1.58E-42 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Gene3D G3DSA:2.40.50.140 47 138 1.8E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SMART SM00487 265 459 7.8E-31 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SMART SM00490 505 589 4.4E-22 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SUPERFAMILY SSF52540 508 653 1.27E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Pfam PF17191 RecG wedge domain 14 171 3.9E-21 T 21-04-2016 IPR033454 RecG, wedge domain SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Gene3D G3DSA:3.40.50.300 254 453 6.2E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 SUPERFAMILY SSF52540 209 453 1.53E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031:SF249 299 603 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031:SF249 655 690 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 PANTHER PTHR24031:SF249 268 282 1.3E-127 T 21-04-2016 SDY_4084 ad53a5f57341c13703727f99a0ae4f23 693 Pfam PF00270 DEAD/DEAH box helicase 293 433 1.3E-18 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 PANTHER PTHR30182 1 453 1.7E-294 T 21-04-2016 SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 Pfam PF03315 Serine dehydratase beta chain 3 155 7.9E-53 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 SUPERFAMILY SSF143548 16 158 1.7E-42 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 4.4E-98 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 Gene3D G3DSA:3.30.1330.90 10 157 5.6E-51 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 PANTHER PTHR30182:SF5 1 453 1.7E-294 T 21-04-2016 SDY_3304 c3229aff1b235996ba97ceb8a953b85d 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.4E-216 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 3.2E-125 T 21-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 PANTHER PTHR30519:SF0 1 752 0.0 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 PIRSF PIRSF000382 2 753 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 Gene3D G3DSA:3.20.20.210 387 751 5.7E-136 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.464 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 PANTHER PTHR30519 1 752 0.0 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 3.9E-163 T 21-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 Gene3D G3DSA:3.20.20.210 5 384 1.3E-150 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 SUPERFAMILY SSF51726 5 389 3.01E-114 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 SUPERFAMILY SSF51726 391 751 1.7E-120 T 21-04-2016 SDY_3914 546abd9daf9d05f50e96969bd04fbee8 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 21-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SDY_0182 f942a83d8482814384d789489e09a3f7 274 PANTHER PTHR19136:SF52 13 273 7.7E-138 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Gene3D G3DSA:2.160.10.10 89 255 1.4E-64 T 21-04-2016 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.715 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.7E-26 T 21-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0182 f942a83d8482814384d789489e09a3f7 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0182 f942a83d8482814384d789489e09a3f7 274 PANTHER PTHR19136 13 273 7.7E-138 T 21-04-2016 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Gene3D G3DSA:1.10.166.10 1 70 8.6E-33 T 21-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SDY_0182 f942a83d8482814384d789489e09a3f7 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 3.2E-164 T 21-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SDY_0182 f942a83d8482814384d789489e09a3f7 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.4E-13 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0182 f942a83d8482814384d789489e09a3f7 274 SUPERFAMILY SSF51161 1 256 1.8E-81 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 195 0.0044 T 21-04-2016 SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PANTHER PTHR24322:SF463 159 191 4.0E-113 T 21-04-2016 SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PANTHER PTHR24322:SF463 20 143 4.0E-113 T 21-04-2016 SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 Pfam PF00106 short chain dehydrogenase 16 204 5.6E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 SUPERFAMILY SSF51735 16 266 1.32E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PANTHER PTHR24322 159 191 4.0E-113 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PANTHER PTHR24322 20 143 4.0E-113 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.65E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.65E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.65E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.65E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.65E-17 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0406 d04836ae8085c2d8fcf3e108c8378dfd 269 Gene3D G3DSA:3.40.50.720 16 264 1.4E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 PANTHER PTHR30562:SF1 1 575 8.6E-285 T 21-04-2016 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 SUPERFAMILY SSF46600 190 243 3.14E-14 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 575 27.857 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Gene3D G3DSA:3.40.1440.10 17 97 1.9E-11 T 21-04-2016 IPR027299 GIY-YIG domain SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 574 2.7E-233 T 21-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 SMART SM00465 17 98 2.2E-23 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Gene3D G3DSA:4.10.860.10 183 243 1.3E-22 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 SUPERFAMILY SSF82771 17 100 2.75E-24 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.2E-11 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 PANTHER PTHR30562 1 575 8.6E-285 T 21-04-2016 SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 3.6E-45 T 21-04-2016 IPR001162 UvrC family homology region SDY_1105 697827f9e217643d7f7f7ff15ace8036 575 Pfam PF02151 UvrB/uvrC motif 205 237 4.4E-10 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 SUPERFAMILY SSF53697 1 189 5.88E-52 T 21-04-2016 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.7E-84 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 Gene3D G3DSA:3.40.50.10490 1 190 2.1E-63 T 21-04-2016 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.716 T 21-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 PANTHER PTHR30390 2 192 5.9E-94 T 21-04-2016 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 Pfam PF13580 SIS domain 12 146 1.8E-31 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_0248 a2591d0e15d80f29e4cdbbdbcea22ee6 192 PANTHER PTHR30390:SF6 2 192 5.9E-94 T 21-04-2016 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 Gene3D G3DSA:1.10.3720.10 181 305 1.7E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 Gene3D G3DSA:1.10.3720.10 72 141 1.7E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 SUPERFAMILY SSF161098 72 138 4.45E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 SUPERFAMILY SSF161098 178 300 4.45E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.8E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 PANTHER PTHR30465:SF65 1 147 1.1E-190 T 21-04-2016 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 PANTHER PTHR30465:SF65 172 315 1.1E-190 T 21-04-2016 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 PANTHER PTHR30465 1 147 1.1E-190 T 21-04-2016 SDY_1639 12d41f2d8211ec99ea052afc3bbd4645 321 PANTHER PTHR30465 172 315 1.1E-190 T 21-04-2016 SDY_4275 712ac21c95086704f6f64b6d44cd253b 301 SUPERFAMILY SSF53098 125 291 8.73E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4275 712ac21c95086704f6f64b6d44cd253b 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4275 712ac21c95086704f6f64b6d44cd253b 301 Gene3D G3DSA:3.30.420.10 119 282 2.6E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4275 712ac21c95086704f6f64b6d44cd253b 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 SMART SM00490 259 340 4.8E-32 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 PANTHER PTHR24031:SF261 6 453 1.1E-290 T 21-04-2016 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 PANTHER PTHR24031:SF261 532 628 1.1E-290 T 21-04-2016 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 SUPERFAMILY SSF52540 75 361 1.47E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.8E-29 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Pfam PF00270 DEAD/DEAH box helicase 31 195 2.0E-51 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Pfam PF03880 DbpA RNA binding domain 489 558 2.0E-20 T 21-04-2016 IPR005580 DbpA, RNA-binding domain SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 PANTHER PTHR24031 6 453 1.1E-290 T 21-04-2016 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 PANTHER PTHR24031 532 628 1.1E-290 T 21-04-2016 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 560 47.229 T 21-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Gene3D G3DSA:3.40.50.300 208 375 1.8E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 SMART SM00487 25 223 8.2E-65 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Pfam PF12343 Cold shock protein DEAD box A 568 629 6.8E-12 T 21-04-2016 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SDY_3341 a48a692480418ca6306d0bc5edc4e183 629 Gene3D G3DSA:3.40.50.300 6 207 5.3E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4133 c77c8f056bb7d66ade8165ce6a7653bd 333 PANTHER PTHR10584:SF166 1 333 5.5E-60 T 21-04-2016 SDY_4133 c77c8f056bb7d66ade8165ce6a7653bd 333 SUPERFAMILY SSF53613 6 328 8.11E-51 T 21-04-2016 IPR029056 Ribokinase-like SDY_4133 c77c8f056bb7d66ade8165ce6a7653bd 333 Gene3D G3DSA:3.40.1190.20 1 331 7.2E-57 T 21-04-2016 IPR029056 Ribokinase-like SDY_4133 c77c8f056bb7d66ade8165ce6a7653bd 333 Pfam PF00294 pfkB family carbohydrate kinase 31 321 8.1E-34 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_4133 c77c8f056bb7d66ade8165ce6a7653bd 333 PANTHER PTHR10584 1 333 5.5E-60 T 21-04-2016 SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 PANTHER PTHR10072 1 114 5.2E-50 T 21-04-2016 SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 113 5.5E-39 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 Gene3D G3DSA:2.60.300.12 9 104 9.0E-32 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.123 T 21-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 SDY_0172 f820d44147862f2bcd9e5cf6b9f34043 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_0191 702999069b41f023f69eddaef08b19a0 285 Pfam PF01148 Cytidylyltransferase family 4 278 6.0E-71 T 21-04-2016 SDY_0191 702999069b41f023f69eddaef08b19a0 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 21-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SDY_0191 702999069b41f023f69eddaef08b19a0 285 PANTHER PTHR13773 2 279 8.1E-97 T 21-04-2016 SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 PANTHER PTHR35272 5 236 2.1E-117 T 21-04-2016 SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 Gene3D G3DSA:3.40.30.10 98 231 1.8E-53 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 SUPERFAMILY SSF52833 85 230 2.48E-44 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 PANTHER PTHR35272:SF3 5 236 2.1E-117 T 21-04-2016 SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 Gene3D G3DSA:3.10.450.70 21 81 2.2E-27 T 21-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 SUPERFAMILY SSF54423 22 80 1.44E-18 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 ProSitePatterns PS00194 Thioredoxin family active site. 110 128 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 75 6.5E-15 T 21-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SDY_3189 788d68cf6e29409ca4a37ff3dc527ee9 236 Pfam PF13098 Thioredoxin-like domain 104 226 1.2E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4025 89f4e395d961f21495741ae5f17800b1 257 PANTHER PTHR24220:SF560 12 252 3.6E-199 T 21-04-2016 SDY_4025 89f4e395d961f21495741ae5f17800b1 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4025 89f4e395d961f21495741ae5f17800b1 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 1.6E-121 T 21-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SDY_4025 89f4e395d961f21495741ae5f17800b1 257 SUPERFAMILY SSF52540 11 243 2.66E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4025 89f4e395d961f21495741ae5f17800b1 257 SMART SM00382 35 237 1.0E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4025 89f4e395d961f21495741ae5f17800b1 257 PANTHER PTHR24220 12 252 3.6E-199 T 21-04-2016 SDY_4025 89f4e395d961f21495741ae5f17800b1 257 Gene3D G3DSA:3.40.50.300 11 251 1.5E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4025 89f4e395d961f21495741ae5f17800b1 257 Pfam PF00005 ABC transporter 26 181 1.4E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1094 1171 2.7E-24 T 21-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 529 799 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 279 506 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 1 260 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 817 933 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 1024 1184 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF03527 RHS protein 1067 1104 1.5E-13 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1061 1081 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1023 1042 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1139 1158 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1092 1107 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1116 1136 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 529 799 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 279 506 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 1 260 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 817 933 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 1024 1184 0.0 T 21-04-2016 SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 575 612 2.0E-8 T 21-04-2016 IPR006530 YD repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 409 444 1.7E-4 T 21-04-2016 IPR006530 YD repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 637 678 6.6E-6 T 21-04-2016 IPR006530 YD repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 451 482 0.0022 T 21-04-2016 IPR006530 YD repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 596 627 5.9E-4 T 21-04-2016 IPR006530 YD repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 575 611 3.2E-7 T 21-04-2016 IPR031325 RHS repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 863 908 1.2E-7 T 21-04-2016 IPR031325 RHS repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 637 674 1.7E-8 T 21-04-2016 IPR031325 RHS repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 425 463 9.7E-7 T 21-04-2016 IPR031325 RHS repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 361 391 3.9E-5 T 21-04-2016 IPR031325 RHS repeat SDY_3800 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 535 568 5.6E-5 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1094 1171 2.7E-24 T 21-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 529 799 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 279 506 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 1 260 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 817 933 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305 1024 1184 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF03527 RHS protein 1067 1104 1.5E-13 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1061 1081 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1023 1042 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1139 1158 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1092 1107 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PRINTS PR00394 RHS protein signature 1116 1136 6.6E-55 T 21-04-2016 IPR001826 RHS protein SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 529 799 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 279 506 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 1 260 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 817 933 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 PANTHER PTHR32305:SF6 1024 1184 0.0 T 21-04-2016 SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 575 612 2.0E-8 T 21-04-2016 IPR006530 YD repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 409 444 1.7E-4 T 21-04-2016 IPR006530 YD repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 637 678 6.6E-6 T 21-04-2016 IPR006530 YD repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 451 482 0.0022 T 21-04-2016 IPR006530 YD repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 596 627 5.9E-4 T 21-04-2016 IPR006530 YD repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 575 611 3.2E-7 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 863 908 1.2E-7 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 637 674 1.7E-8 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 425 463 9.7E-7 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 361 391 3.9E-5 T 21-04-2016 IPR031325 RHS repeat SDY_4210 1906684facc99aec1f589ccec4841abd 1213 Pfam PF05593 RHS Repeat 535 568 5.6E-5 T 21-04-2016 IPR031325 RHS repeat SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282:SF5 672 751 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 SUPERFAMILY SSF56601 422 610 8.46E-112 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 SUPERFAMILY SSF56601 211 233 8.46E-112 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 SUPERFAMILY SSF56601 672 832 8.46E-112 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 SUPERFAMILY SSF56601 262 313 8.46E-112 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Gene3D G3DSA:1.10.3810.10 55 231 7.5E-76 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 611 2.3E-24 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 SUPERFAMILY SSF53955 43 256 1.69E-80 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 2.2E-31 T 21-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282:SF5 421 612 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282:SF5 767 839 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282 421 612 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282 767 839 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Gene3D G3DSA:2.40.50.140 347 421 6.7E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Gene3D G3DSA:3.40.710.10 232 313 5.1E-132 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Gene3D G3DSA:3.40.710.10 422 611 5.1E-132 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Gene3D G3DSA:3.40.710.10 673 831 5.1E-132 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282 672 751 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282:SF5 2 310 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 PANTHER PTHR32282 2 310 1.6E-294 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 758 9.1E-174 T 21-04-2016 SDY_3682 edc2501f7319ee81037c272b342cecf0 850 Pfam PF00912 Transglycosylase 55 229 5.6E-65 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.9E-62 T 21-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 Gene3D G3DSA:1.10.1660.10 1 55 3.1E-23 T 21-04-2016 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.6E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.6E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-7 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 PANTHER PTHR30204 1 134 3.8E-86 T 21-04-2016 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 PANTHER PTHR30204:SF16 1 134 3.8E-86 T 21-04-2016 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 SMART SM00422 1 70 4.4E-30 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 Pfam PF13411 MerR HTH family regulatory protein 1 66 6.0E-18 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 SUPERFAMILY SSF46955 1 126 2.49E-35 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_0415 e4102812c9e50e21dd0e0c43016ce742 135 Gene3D G3DSA:1.10.1660.10 56 131 3.1E-25 T 21-04-2016 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.1E-67 T 21-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 PIRSF PIRSF002181 1 142 2.7E-50 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 PANTHER PTHR11545 1 142 5.5E-80 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.102 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 Gene3D G3DSA:3.90.1180.10 3 141 1.8E-64 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 21-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 Pfam PF00572 Ribosomal protein L13 15 138 1.8E-56 T 21-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SDY_3407 b42947d9717721960970eb7b8ea108a5 142 SUPERFAMILY SSF52161 1 140 7.59E-60 T 21-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SDY_4159 f3720d0048819c06ebc0644d1e58153f 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 1.0E-29 T 21-04-2016 IPR020264 Uncharacterised protein family YidG SDY_4159 f3720d0048819c06ebc0644d1e58153f 120 Pfam PF02656 Domain of unknown function (DUF202) 12 65 7.3E-10 T 21-04-2016 IPR003807 Domain of unknown function DUF202 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 4.7E-95 T 21-04-2016 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 283 4.5E-26 T 21-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 PANTHER PTHR10000 4 321 3.0E-219 T 21-04-2016 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 SUPERFAMILY SSF56784 109 316 2.58E-48 T 21-04-2016 IPR023214 HAD-like domain SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 Gene3D G3DSA:3.40.50.1000 176 302 7.1E-41 T 21-04-2016 IPR023214 HAD-like domain SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 142 280 1.7E-18 T 21-04-2016 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 Gene3D G3DSA:1.10.150.210 126 175 1.3E-27 T 21-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SDY_4649 db2378de01400c3d3458cd125f8f2e0e 322 PANTHER PTHR10000:SF7 4 321 3.0E-219 T 21-04-2016 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 SMART SM00359 3 88 1.2E-18 T 21-04-2016 IPR002478 PUA domain GO:0003723 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.609 T 21-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 371 2.4E-30 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 PANTHER PTHR11061:SF12 7 398 7.1E-128 T 21-04-2016 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 Gene3D G3DSA:3.40.50.150 185 395 1.0E-61 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 SUPERFAMILY SSF88697 4 71 1.28E-16 T 21-04-2016 IPR015947 PUA-like domain SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 PANTHER PTHR11061 7 398 7.1E-128 T 21-04-2016 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 Gene3D G3DSA:3.30.750.80 73 180 3.0E-35 T 21-04-2016 SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 SUPERFAMILY SSF53335 79 392 2.69E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0942 f43175f9f0d34eae0b4060a45cd69b89 398 Gene3D G3DSA:2.30.130.10 4 69 5.1E-27 T 21-04-2016 IPR015947 PUA-like domain SDY_0034 83e24d1b011dea566c31f593927c9702 178 PANTHER PTHR22573 1 171 1.4E-80 T 21-04-2016 SDY_0034 83e24d1b011dea566c31f593927c9702 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.5E-23 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SDY_0034 83e24d1b011dea566c31f593927c9702 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.3E-73 T 21-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SDY_0034 83e24d1b011dea566c31f593927c9702 178 SUPERFAMILY SSF53271 3 173 1.97E-53 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0034 83e24d1b011dea566c31f593927c9702 178 PANTHER PTHR22573:SF56 1 171 1.4E-80 T 21-04-2016 SDY_0034 83e24d1b011dea566c31f593927c9702 178 Gene3D G3DSA:3.40.50.2020 2 173 2.5E-78 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_3969 defdcab86352707bf7e7f3dde02df190 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SDY_3969 defdcab86352707bf7e7f3dde02df190 421 PANTHER PTHR24031:SF173 1 421 1.5E-282 T 21-04-2016 SDY_3969 defdcab86352707bf7e7f3dde02df190 421 SMART SM00487 28 234 9.3E-54 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_3969 defdcab86352707bf7e7f3dde02df190 421 PANTHER PTHR24031 1 421 1.5E-282 T 21-04-2016 SDY_3969 defdcab86352707bf7e7f3dde02df190 421 Gene3D G3DSA:3.40.50.300 232 386 1.3E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3969 defdcab86352707bf7e7f3dde02df190 421 Gene3D G3DSA:3.40.50.300 8 231 1.1E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3969 defdcab86352707bf7e7f3dde02df190 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.957 T 21-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 SDY_3969 defdcab86352707bf7e7f3dde02df190 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 5.6E-45 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3969 defdcab86352707bf7e7f3dde02df190 421 SUPERFAMILY SSF52540 83 363 3.31E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3969 defdcab86352707bf7e7f3dde02df190 421 SMART SM00490 270 351 8.2E-31 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3969 defdcab86352707bf7e7f3dde02df190 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 3.1E-28 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0718a d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0718a d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0718a d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_1251a d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1251a d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1251a d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_4715 d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4715 d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4715 d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_4818 d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4818 d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4818 d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_1273a d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1273a d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1273a d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_1482a d87f793baa3f37c54641962807369cd4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1482a d87f793baa3f37c54641962807369cd4 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1482a d87f793baa3f37c54641962807369cd4 90 PANTHER PTHR33293 1 89 1.0E-20 T 21-04-2016 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 SUPERFAMILY SSF51735 3 164 6.76E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 1.0E-50 T 21-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PANTHER PTHR32092 1 440 2.9E-300 T 21-04-2016 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 Gene3D G3DSA:3.40.50.720 1 165 7.8E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 9.2E-66 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 Gene3D G3DSA:3.90.110.10 167 439 9.5E-101 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 21-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PANTHER PTHR32092:SF7 1 440 2.9E-300 T 21-04-2016 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 SUPERFAMILY SSF56327 168 439 4.86E-91 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4168 179ccf2a4a4ec55a6bd7c1f785da5f47 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 6.6E-60 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_3324 4be5768ea4f3b1b3318616127ec2cc34 363 SUPERFAMILY SSF49401 219 360 1.18E-14 T 21-04-2016 IPR008966 Adhesion domain SDY_3324 4be5768ea4f3b1b3318616127ec2cc34 363 Pfam PF00419 Fimbrial protein 216 362 4.0E-22 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 SUPERFAMILY SSF52518 2 179 4.53E-63 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 SUPERFAMILY SSF52467 189 362 2.95E-63 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 3.1E-49 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 PANTHER PTHR18968:SF116 2 574 0.0 T 21-04-2016 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.4E-283 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.2E-46 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 PANTHER PTHR18968 2 574 0.0 T 21-04-2016 SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Gene3D G3DSA:3.40.50.970 358 558 2.4E-76 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Gene3D G3DSA:3.40.50.1220 190 357 2.0E-68 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 SUPERFAMILY SSF52518 371 567 1.73E-68 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Gene3D G3DSA:3.40.50.970 2 173 1.6E-72 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0107 5e9d6a791f266a3625a7969779bff4f4 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 6.5E-57 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.926 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 PIRSF PIRSF001554 1 388 3.9E-152 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 21-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 PANTHER PTHR11815 1 388 5.6E-232 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Gene3D G3DSA:3.30.470.20 96 239 4.7E-57 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 SUPERFAMILY SSF52210 239 385 9.81E-53 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Pfam PF00549 CoA-ligase 262 382 2.1E-24 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Pfam PF08442 ATP-grasp domain 2 203 1.3E-81 T 21-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Gene3D G3DSA:3.30.1490.20 22 95 1.1E-33 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 Gene3D G3DSA:3.40.50.261 240 383 3.4E-64 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.3E-182 T 21-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SDY_0666 550c7fe853b2c4c2340be6337f9f4f50 388 SUPERFAMILY SSF56059 1 238 3.93E-79 T 21-04-2016 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 Gene3D G3DSA:3.90.1170.10 22 133 8.3E-53 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.4E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.4E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.4E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.4E-40 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.9E-59 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 6.4E-47 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 SUPERFAMILY SSF54686 3 133 9.16E-55 T 21-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 21-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 PANTHER PTHR12220 1 136 5.1E-76 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.018 T 21-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SDY_3489 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 21-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 PANTHER PTHR24220 7 257 1.1E-189 T 21-04-2016 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 PIRSF PIRSF039085 2 257 2.8E-122 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 Gene3D G3DSA:3.40.50.300 6 252 1.8E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2505 87794e917e4321d5bd3d895fded469a5 257 SMART SM00382 30 229 7.6E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2505 87794e917e4321d5bd3d895fded469a5 257 Pfam PF00005 ABC transporter 21 181 1.3E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 PANTHER PTHR24220:SF347 7 257 1.1E-189 T 21-04-2016 SDY_2505 87794e917e4321d5bd3d895fded469a5 257 SUPERFAMILY SSF52540 6 251 3.24E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0114 ca864650b3b215c619e7ca7958675e39 588 Gene3D G3DSA:3.40.710.10 242 560 7.5E-85 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0114 ca864650b3b215c619e7ca7958675e39 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 2.4E-21 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SDY_0114 ca864650b3b215c619e7ca7958675e39 588 PANTHER PTHR30627 8 587 5.3E-255 T 21-04-2016 SDY_0114 ca864650b3b215c619e7ca7958675e39 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 3.4E-82 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SDY_0114 ca864650b3b215c619e7ca7958675e39 588 Gene3D G3DSA:3.90.1310.10 142 241 4.6E-33 T 21-04-2016 SDY_0114 ca864650b3b215c619e7ca7958675e39 588 PANTHER PTHR30627:SF1 8 587 5.3E-255 T 21-04-2016 SDY_0114 ca864650b3b215c619e7ca7958675e39 588 SUPERFAMILY SSF56601 235 563 1.93E-86 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0114 ca864650b3b215c619e7ca7958675e39 588 SUPERFAMILY SSF56519 63 233 1.18E-46 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 Gene3D G3DSA:1.10.3370.10 17 437 7.1E-167 T 21-04-2016 IPR023201 SecY subunit domain SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 Pfam PF00344 SecY translocase 76 417 7.5E-120 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PANTHER PTHR10906 18 443 5.2E-236 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 21-04-2016 IPR030659 SecY conserved site SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PIRSF PIRSF004557 11 441 2.1E-123 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.977 T 21-04-2016 IPR026593 Protein translocase subunit SecY SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.4E-141 T 21-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.7E-99 T 21-04-2016 SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 21-04-2016 IPR023201 SecY subunit domain SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 21-04-2016 IPR030659 SecY conserved site SDY_3476 a2ec1c58e9e1bb33bc27f003f590db97 443 PANTHER PTHR10906:SF2 18 443 5.2E-236 T 21-04-2016 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 SUPERFAMILY SSF55021 248 343 1.49E-26 T 21-04-2016 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 SMART SM00930 265 340 9.8E-25 T 21-04-2016 IPR018449 NIL domain SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 PANTHER PTHR24220 3 316 3.6E-194 T 21-04-2016 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 SUPERFAMILY SSF52540 1 240 9.44E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 Gene3D G3DSA:3.30.70.260 238 343 5.7E-32 T 21-04-2016 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 Pfam PF00005 ABC transporter 21 169 4.1E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 8.3E-212 T 21-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 SMART SM00382 30 218 2.3E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 PANTHER PTHR24220:SF455 3 316 3.6E-194 T 21-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 Gene3D G3DSA:3.40.50.300 1 237 6.1E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0218 4730a62430d498a2f4b0d28477773f8c 343 Pfam PF09383 NIL domain 268 339 3.8E-20 T 21-04-2016 IPR018449 NIL domain SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 SUPERFAMILY SSF46946 2 114 4.71E-45 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 PANTHER PTHR10871 2 118 1.4E-68 T 21-04-2016 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 PIRSF PIRSF002134 1 118 5.0E-41 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:4.10.910.10 72 118 8.3E-28 T 21-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:1.10.8.50 2 71 8.9E-27 T 21-04-2016 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-52 T 21-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.2E-34 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.319 T 21-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3474 664a2e56c1e17b694a7b948bb241b549 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 21-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_1654a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_1654a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_1654a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1654a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4697 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_4697 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_4697 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4697 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0427a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_0427a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_0427a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0427a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0360a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_0360a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_0360a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0360a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1503a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_1503a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_1503a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1503a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1294a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_1294a 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_1294a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1294a 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4705 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_4705 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_4705 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4705 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4767 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_4767 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_4767 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4767 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4789 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293 1 89 1.2E-18 T 21-04-2016 SDY_4789 4207af7ba4812de6ed7e2ba21dffbac4 90 PANTHER PTHR33293:SF2 1 89 1.2E-18 T 21-04-2016 SDY_4789 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4789 4207af7ba4812de6ed7e2ba21dffbac4 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2698 a284db14ac16d7329b56d534ed92ef23 131 PANTHER PTHR33293:SF1 6 126 1.1E-25 T 21-04-2016 SDY_2698 a284db14ac16d7329b56d534ed92ef23 131 PANTHER PTHR33293 6 126 1.1E-25 T 21-04-2016 SDY_2698 a284db14ac16d7329b56d534ed92ef23 131 Pfam PF03400 IS1 transposase 2 131 1.6E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0410 cec17c589c380d4309f015b97fee478c 305 Pfam PF01145 SPFH domain / Band 7 family 22 203 3.1E-33 T 21-04-2016 IPR001107 Band 7 domain SDY_0410 cec17c589c380d4309f015b97fee478c 305 Pfam PF16200 C-terminal region of band_7 238 297 3.7E-7 T 21-04-2016 IPR032435 Band 7, C-terminal extension SDY_0410 cec17c589c380d4309f015b97fee478c 305 SMART SM00244 18 176 1.0E-58 T 21-04-2016 IPR001107 Band 7 domain SDY_0410 cec17c589c380d4309f015b97fee478c 305 PANTHER PTHR10264 1 304 2.7E-127 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 SUPERFAMILY SSF117892 49 183 6.02E-41 T 21-04-2016 IPR001107 Band 7 domain SDY_0410 cec17c589c380d4309f015b97fee478c 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 21-04-2016 IPR018080 Band 7/stomatin-like, conserved site SDY_0410 cec17c589c380d4309f015b97fee478c 305 PRINTS PR00721 Stomatin signature 108 125 1.0E-26 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 PRINTS PR00721 Stomatin signature 128 151 1.0E-26 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 PRINTS PR00721 Stomatin signature 152 170 1.0E-26 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 PRINTS PR00721 Stomatin signature 171 192 1.0E-26 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 PRINTS PR00721 Stomatin signature 73 94 1.0E-26 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_0410 cec17c589c380d4309f015b97fee478c 305 PANTHER PTHR10264:SF27 1 304 2.7E-127 T 21-04-2016 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 PANTHER PTHR30537:SF26 1 305 3.8E-161 T 21-04-2016 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 Pfam PF03466 LysR substrate binding domain 91 292 7.6E-41 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-21 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 Gene3D G3DSA:3.40.190.10 94 179 1.1E-35 T 21-04-2016 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 PANTHER PTHR30537 1 305 3.8E-161 T 21-04-2016 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 SUPERFAMILY SSF53850 93 295 1.01E-40 T 21-04-2016 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 Gene3D G3DSA:1.10.10.10 2 88 2.0E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3026 ccd22a5bbe770dddd6385e4997951c49 305 Gene3D G3DSA:3.40.190.10 180 258 2.4E-17 T 21-04-2016 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 SUPERFAMILY SSF100950 75 234 1.67E-23 T 21-04-2016 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.1E-37 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.3E-20 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 SMART SM01134 74 232 6.7E-38 T 21-04-2016 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 SUPERFAMILY SSF46785 5 60 2.11E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 70.212 T 21-04-2016 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 SMART SM00420 6 58 4.8E-23 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 Gene3D G3DSA:3.40.50.1360 76 215 1.1E-4 T 21-04-2016 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 Gene3D G3DSA:1.10.10.10 1 55 6.0E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 PANTHER PTHR30363:SF4 1 251 7.2E-113 T 21-04-2016 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.4E-6 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.4E-6 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_4360 b99f4be448fb9371ee5f04d6b621b880 251 PANTHER PTHR30363 1 251 7.2E-113 T 21-04-2016 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 PANTHER PTHR26402:SF524 7 122 3.0E-34 T 21-04-2016 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 Gene3D G3DSA:2.20.25.10 219 244 3.3E-7 T 21-04-2016 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 SMART SM00448 7 117 4.2E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 SMART SM00850 148 243 4.5E-27 T 21-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 PANTHER PTHR26402 7 122 3.0E-34 T 21-04-2016 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 Gene3D G3DSA:3.40.50.2300 5 127 4.3E-32 T 21-04-2016 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 Pfam PF00072 Response regulator receiver domain 9 117 2.2E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 Pfam PF04397 LytTr DNA-binding domain 149 242 1.7E-24 T 21-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 SUPERFAMILY SSF52172 5 128 9.11E-32 T 21-04-2016 IPR011006 CheY-like superfamily SDY_2164 5b67e427902cf8610b2d201e05cf3a90 244 Gene3D G3DSA:2.40.50.40 140 206 1.2E-10 T 21-04-2016 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 21-04-2016 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:3.40.50.300 3 208 5.3E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 21-04-2016 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PANTHER PTHR23115:SF151 1 392 0.0 T 21-04-2016 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 PANTHER PTHR23115 1 392 0.0 T 21-04-2016 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-239 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.095 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_3500 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 21-04-2016 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 Gene3D G3DSA:3.40.640.10 58 278 7.8E-96 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 SUPERFAMILY SSF53383 5 396 1.2E-126 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 Gene3D G3DSA:3.90.1150.10 279 393 9.9E-36 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 PANTHER PTHR13693:SF60 1 397 4.7E-264 T 21-04-2016 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 54.037 T 21-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 PANTHER PTHR13693 1 397 4.7E-264 T 21-04-2016 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 Pfam PF00155 Aminotransferase class I and II 43 387 4.4E-79 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SDY_4050 97862032edf3dfbb6a29d70ead99d560 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 5.1E-225 T 21-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 Gene3D G3DSA:3.40.190.10 181 267 5.1E-10 T 21-04-2016 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 SUPERFAMILY SSF53850 93 291 9.96E-22 T 21-04-2016 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 PANTHER PTHR30126:SF22 6 298 1.4E-213 T 21-04-2016 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 Gene3D G3DSA:3.40.190.10 94 180 9.3E-7 T 21-04-2016 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 Pfam PF03466 LysR substrate binding domain 133 283 1.4E-17 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 PANTHER PTHR30126 6 298 1.4E-213 T 21-04-2016 SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 SUPERFAMILY SSF46785 8 91 1.74E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3297 38d7e9513013f14fcc622e201df9bb84 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.1E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-51 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PANTHER PTHR33449 1 109 3.6E-56 T 21-04-2016 SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.7E-35 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 SUPERFAMILY SSF82607 11 103 1.44E-36 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PANTHER PTHR33449:SF1 1 109 3.6E-56 T 21-04-2016 SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-42 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0448 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PIRSF PIRSF004555 3 109 1.5E-39 T 21-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SDY_0694 047903dd95407ad047ceb98057c5e5fc 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 22 341 2.4E-128 T 21-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SDY_0694 047903dd95407ad047ceb98057c5e5fc 347 PANTHER PTHR30573 1 346 4.9E-168 T 21-04-2016 SDY_0694 047903dd95407ad047ceb98057c5e5fc 347 SUPERFAMILY SSF142754 29 341 7.06E-107 T 21-04-2016 SDY_0694 047903dd95407ad047ceb98057c5e5fc 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.437 T 21-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SDY_0694 047903dd95407ad047ceb98057c5e5fc 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 2.6E-102 T 21-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Gene3D G3DSA:1.10.8.50 127 263 1.7E-31 T 21-04-2016 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 21-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 SMART SM00898 2 110 1.2E-13 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Gene3D G3DSA:3.20.190.10 2 105 1.6E-17 T 21-04-2016 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 1.5E-10 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 SUPERFAMILY SSF46946 126 214 1.7E-17 T 21-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 SUPERFAMILY SSF81624 2 127 1.14E-26 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 68.188 T 21-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 SUPERFAMILY SSF57716 226 262 3.01E-10 T 21-04-2016 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 SMART SM01232 126 221 3.2E-16 T 21-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 PANTHER PTHR22993:SF14 1 262 6.3E-205 T 21-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 4.4E-11 T 21-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 PANTHER PTHR22993 1 262 6.3E-205 T 21-04-2016 SDY_0649 3199f8ab96baf8d7e8994d0ac0430e9c 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.0E-7 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 4.7E-44 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 21-04-2016 IPR020895 Frataxin conserved site SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 SMART SM01219 1 106 1.7E-57 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.262 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 Pfam PF01491 Frataxin-like domain 1 102 1.3E-30 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 PANTHER PTHR16821 1 105 6.6E-43 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 SUPERFAMILY SSF55387 1 105 1.29E-40 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3938 361a48ee9873e2216b08d9cc6b57f9e9 106 Gene3D G3DSA:3.30.920.10 1 105 3.5E-37 T 21-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 21-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 PANTHER PTHR12899 1 117 3.3E-49 T 21-04-2016 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.5E-44 T 21-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 24 117 6.9E-37 T 21-04-2016 SDY_3480 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 21-04-2016 SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 Pfam PF07690 Major Facilitator Superfamily 14 336 9.7E-40 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 PANTHER PTHR23501:SF29 1 373 1.9E-99 T 21-04-2016 SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 SUPERFAMILY SSF103473 1 384 1.57E-58 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 Gene3D G3DSA:1.20.1250.20 207 379 4.9E-19 T 21-04-2016 SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 PANTHER PTHR23501 1 373 1.9E-99 T 21-04-2016 SDY_2432 c762ee0f828e2a3e4c7d307465b59232 396 Gene3D G3DSA:1.20.1250.20 1 184 2.6E-30 T 21-04-2016 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Gene3D G3DSA:1.10.940.10 2 147 6.5E-49 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Gene3D G3DSA:1.10.287.730 148 172 5.9E-18 T 21-04-2016 SDY_3465 b22e20d2e72b18d50725465c36099920 429 SUPERFAMILY SSF48013 5 149 3.43E-36 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Pfam PF01029 NusB family 6 127 1.1E-25 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_3465 b22e20d2e72b18d50725465c36099920 429 SUPERFAMILY SSF53335 142 429 1.52E-76 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3465 b22e20d2e72b18d50725465c36099920 429 PANTHER PTHR22807:SF30 37 429 1.5E-142 T 21-04-2016 SDY_3465 b22e20d2e72b18d50725465c36099920 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 9.6E-196 T 21-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.5E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.5E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.5E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.5E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.5E-31 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 426 8.2E-80 T 21-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Gene3D G3DSA:3.40.50.150 233 429 6.2E-56 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3465 b22e20d2e72b18d50725465c36099920 429 Gene3D G3DSA:3.30.70.1170 173 230 2.6E-28 T 21-04-2016 SDY_3465 b22e20d2e72b18d50725465c36099920 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 21-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3465 b22e20d2e72b18d50725465c36099920 429 PANTHER PTHR22807 37 429 1.5E-142 T 21-04-2016 SDY_3465 b22e20d2e72b18d50725465c36099920 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 74.33 T 21-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 Gene3D G3DSA:3.40.930.10 5 141 1.7E-40 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 SUPERFAMILY SSF55594 287 375 5.5E-24 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 Gene3D G3DSA:3.30.1340.10 287 374 3.4E-31 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 PANTHER PTHR30181:SF3 2 376 4.8E-191 T 21-04-2016 SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 3.7E-29 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 SUPERFAMILY SSF55804 2 140 1.96E-39 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.1E-24 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 SUPERFAMILY SSF55804 150 276 2.79E-12 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 1.6E-21 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 PANTHER PTHR30181 2 376 4.8E-191 T 21-04-2016 SDY_2317 5dc45dda14e75c5a8b70a2c51aa78dc9 376 Gene3D G3DSA:3.40.930.10 150 278 2.0E-11 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 3.6E-52 T 21-04-2016 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PANTHER PTHR24322 10 128 6.1E-106 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PANTHER PTHR24322 144 176 6.1E-106 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 Gene3D G3DSA:3.40.50.720 2 246 1.9E-69 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 247 2.5E-108 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 94 114 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 198 217 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 224 243 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 159 182 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 74 91 3.9E-67 T 21-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.7E-7 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 1.7E-7 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 1.7E-7 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 177 5.9E-4 T 21-04-2016 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PANTHER PTHR24322:SF336 10 128 6.1E-106 T 21-04-2016 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 PANTHER PTHR24322:SF336 144 176 6.1E-106 T 21-04-2016 SDY_0527 4e9c27f5ae6ef15930dec6d1fac9a6f4 248 SUPERFAMILY SSF51735 1 246 1.01E-66 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1514 ec84ef5780011d663c596ec9530861b3 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PANTHER PTHR11606:SF4 1 447 2.0E-250 T 21-04-2016 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.5E-33 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.5E-33 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.5E-33 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.5E-33 T 21-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Gene3D G3DSA:3.40.50.720 209 372 7.7E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PANTHER PTHR11606 1 447 2.0E-250 T 21-04-2016 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Gene3D G3DSA:1.10.285.10 373 446 2.0E-26 T 21-04-2016 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Gene3D G3DSA:1.10.285.10 7 67 5.2E-28 T 21-04-2016 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 PIRSF PIRSF000185 22 447 1.0E-114 T 21-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 SMART SM00839 204 445 1.4E-93 T 21-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 SUPERFAMILY SSF51735 202 446 2.22E-77 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1514 ec84ef5780011d663c596ec9530861b3 447 SUPERFAMILY SSF53223 6 196 6.4E-74 T 21-04-2016 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 7.1E-49 T 21-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.6E-87 T 21-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SDY_1514 ec84ef5780011d663c596ec9530861b3 447 Gene3D G3DSA:3.40.192.10 68 188 8.2E-61 T 21-04-2016 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 SUPERFAMILY SSF52016 419 600 7.3E-58 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 PANTHER PTHR21000:SF9 1 603 0.0 T 21-04-2016 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 SUPERFAMILY SSF143975 1 418 2.88E-146 T 21-04-2016 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 PANTHER PTHR21000 1 603 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 Pfam PF00920 Dehydratase family 66 598 3.2E-158 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_1137 c234e568525b10b5bc7dfffd4ec0d1f6 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 602 0.0 T 21-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 7.2E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.2E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 7.2E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 7.2E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 7.2E-9 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 SUPERFAMILY SSF55486 204 450 1.19E-75 T 21-04-2016 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PANTHER PTHR11533 609 869 0.0 T 21-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PANTHER PTHR11533 10 586 0.0 T 21-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 Gene3D G3DSA:1.25.50.10 547 870 7.3E-125 T 21-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PANTHER PTHR11533:SF152 609 869 0.0 T 21-04-2016 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 PANTHER PTHR11533:SF152 10 586 0.0 T 21-04-2016 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 1.4E-136 T 21-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 SUPERFAMILY SSF63737 1 193 1.83E-44 T 21-04-2016 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 21-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 Gene3D G3DSA:1.10.390.10 308 451 6.5E-36 T 21-04-2016 SDY_2325 1eace7136703b59b3bde5b71c6be689e 870 Pfam PF01433 Peptidase family M1 50 384 7.8E-70 T 21-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 PANTHER PTHR21047:SF2 1 177 4.3E-77 T 21-04-2016 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 1.0E-103 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 177 1.6E-76 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 Gene3D G3DSA:2.60.120.10 1 178 3.3E-85 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 PANTHER PTHR21047 1 177 4.3E-77 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 9.4E-83 T 21-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SDY_2207 8496d67dd670bfdce31cbb192a793e4d 185 SUPERFAMILY SSF51182 1 178 3.56E-80 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_4018 291e20c6cb5291db88314059d59d6463 456 PANTHER PTHR22572:SF115 7 449 1.6E-234 T 21-04-2016 SDY_4018 291e20c6cb5291db88314059d59d6463 456 SUPERFAMILY SSF53448 5 252 7.3E-67 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4018 291e20c6cb5291db88314059d59d6463 456 Gene3D G3DSA:2.160.10.10 325 455 6.8E-34 T 21-04-2016 SDY_4018 291e20c6cb5291db88314059d59d6463 456 Pfam PF12804 MobA-like NTP transferase domain 8 124 2.1E-20 T 21-04-2016 IPR025877 MobA-like NTP transferase SDY_4018 291e20c6cb5291db88314059d59d6463 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.132 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SDY_4018 291e20c6cb5291db88314059d59d6463 456 Gene3D G3DSA:3.90.550.10 3 244 2.5E-71 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4018 291e20c6cb5291db88314059d59d6463 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_4018 291e20c6cb5291db88314059d59d6463 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_4018 291e20c6cb5291db88314059d59d6463 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 5.9E-6 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_4018 291e20c6cb5291db88314059d59d6463 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.2E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_4018 291e20c6cb5291db88314059d59d6463 456 Gene3D G3DSA:2.160.10.10 245 324 8.1E-19 T 21-04-2016 SDY_4018 291e20c6cb5291db88314059d59d6463 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 7.7E-208 T 21-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SDY_4018 291e20c6cb5291db88314059d59d6463 456 SUPERFAMILY SSF51161 255 438 2.62E-51 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_4018 291e20c6cb5291db88314059d59d6463 456 PANTHER PTHR22572 7 449 1.6E-234 T 21-04-2016 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 SMART SM00342 187 270 4.4E-34 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Gene3D G3DSA:2.60.120.280 15 159 6.4E-10 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 SUPERFAMILY SSF51215 11 158 3.53E-13 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 SUPERFAMILY SSF46689 171 221 3.31E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Gene3D G3DSA:1.10.10.60 224 272 1.2E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Pfam PF02311 AraC-like ligand binding domain 17 154 2.7E-22 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 SUPERFAMILY SSF46689 223 272 5.38E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 52.607 T 21-04-2016 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Pfam PF12833 Helix-turn-helix domain 194 271 8.5E-26 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 PANTHER PTHR11019 1 278 1.1E-182 T 21-04-2016 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 PANTHER PTHR11019:SF86 1 278 1.1E-182 T 21-04-2016 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 Gene3D G3DSA:1.10.10.60 168 223 2.5E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.3E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3841 24624aeb585b6d5bd2f39d98d169c2ee 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.3E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 Pfam PF00593 TonB dependent receptor 456 723 6.5E-34 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 164 4.7E-30 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 SUPERFAMILY SSF56935 33 725 3.5E-132 T 21-04-2016 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 Gene3D G3DSA:2.170.130.10 50 167 2.3E-39 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 PANTHER PTHR30069:SF8 1 273 0.0 T 21-04-2016 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 PANTHER PTHR30069:SF8 330 618 0.0 T 21-04-2016 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 PANTHER PTHR30069 1 273 0.0 T 21-04-2016 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 PANTHER PTHR30069 330 618 0.0 T 21-04-2016 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 51 725 1.9E-73 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 Gene3D G3DSA:2.40.170.20 168 725 5.7E-112 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1022 9ba017e0a4599cf4fbe00f62104e1ff9 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 SMART SM00433 34 624 1.6E-213 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-58 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF54211 217 382 2.85E-47 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.30.565.10 15 215 4.6E-78 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF56719 388 621 3.4E-78 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.30.230.10 217 390 3.4E-47 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.40.50.670 398 611 3.9E-77 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.6E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF00204 DNA gyrase B 218 384 4.7E-39 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 21-04-2016 IPR006171 Toprim domain SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 SMART SM00387 27 173 3.0E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PANTHER PTHR10169:SF45 1 629 0.0 T 21-04-2016 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.4E-25 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF55874 5 215 9.47E-70 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.3E-159 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.262 T 21-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_3210 f083252015fa5ddebc10990a5dbf94e7 630 PANTHER PTHR10169 1 629 0.0 T 21-04-2016 SDY_0316 28bc7f267c74f8588cf8726f3d350e2b 171 SUPERFAMILY SSF101307 15 162 6.67E-48 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SDY_0316 28bc7f267c74f8588cf8726f3d350e2b 171 Pfam PF04608 Phosphatidylglycerophosphatase A 22 162 1.0E-50 T 21-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SDY_0316 28bc7f267c74f8588cf8726f3d350e2b 171 PANTHER PTHR36305 7 168 7.9E-78 T 21-04-2016 SDY_0316 28bc7f267c74f8588cf8726f3d350e2b 171 PIRSF PIRSF006162 11 169 1.3E-57 T 21-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_0316 28bc7f267c74f8588cf8726f3d350e2b 171 Gene3D G3DSA:1.10.3760.10 77 156 1.7E-4 T 21-04-2016 IPR027416 YutG-like domain SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Gene3D G3DSA:3.40.120.10 226 316 9.4E-45 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Gene3D G3DSA:3.40.120.10 30 225 7.0E-61 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 PANTHER PTHR22573:SF52 18 546 2.4E-293 T 21-04-2016 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 PANTHER PTHR22573 18 546 2.4E-293 T 21-04-2016 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 SUPERFAMILY SSF55957 433 544 5.93E-20 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 SUPERFAMILY SSF53738 26 235 5.89E-49 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.7E-8 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Gene3D G3DSA:3.30.310.50 466 545 9.9E-31 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 21-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.8E-19 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 1.9E-35 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 SUPERFAMILY SSF53738 305 446 2.24E-32 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 6.2E-31 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 SUPERFAMILY SSF53738 209 317 3.3E-8 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_0628 7f6d1e0d3abba8a5186914c8d4492456 546 Gene3D G3DSA:3.40.120.10 318 441 1.0E-35 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_2024 b1dc092a863bfb358bfb5c1404fdaeb9 376 Gene3D G3DSA:2.60.120.650 10 209 5.2E-43 T 21-04-2016 SDY_2024 b1dc092a863bfb358bfb5c1404fdaeb9 376 Pfam PF08007 Cupin superfamily protein 13 313 1.6E-102 T 21-04-2016 IPR003347 JmjC domain SDY_2024 b1dc092a863bfb358bfb5c1404fdaeb9 376 SUPERFAMILY SSF51197 10 295 3.71E-73 T 21-04-2016 SDY_2024 b1dc092a863bfb358bfb5c1404fdaeb9 376 PANTHER PTHR13096 10 340 5.8E-79 T 21-04-2016 SDY_2024 b1dc092a863bfb358bfb5c1404fdaeb9 376 SMART SM00558 95 218 8.0E-9 T 21-04-2016 IPR003347 JmjC domain SDY_3755 88695c786a249fdf871be093ee90d405 321 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.2E-11 T 21-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SDY_3755 88695c786a249fdf871be093ee90d405 321 Pfam PF08279 HTH domain 9 58 9.0E-13 T 21-04-2016 IPR013196 Helix-turn-helix, type 11 SDY_3755 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:2.30.30.100 271 320 2.8E-24 T 21-04-2016 SDY_3755 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:3.30.930.10 71 269 5.6E-59 T 21-04-2016 SDY_3755 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF55681 69 268 3.85E-59 T 21-04-2016 SDY_3755 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF50037 271 317 7.32E-11 T 21-04-2016 IPR008988 Transcriptional repressor, C-terminal SDY_3755 88695c786a249fdf871be093ee90d405 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.4E-26 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SDY_3755 88695c786a249fdf871be093ee90d405 321 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 3.3E-31 T 21-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 SDY_3755 88695c786a249fdf871be093ee90d405 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 2.2E-87 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SDY_3755 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF46785 3 60 5.56E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3755 88695c786a249fdf871be093ee90d405 321 PANTHER PTHR12835 8 317 2.0E-100 T 21-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SDY_3755 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:1.10.10.10 1 63 9.3E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3755 88695c786a249fdf871be093ee90d405 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.072 T 21-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SDY_2422 0360924c3028eedcfa86cfc844d7ca02 158 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 46 155 4.5E-46 T 21-04-2016 IPR018671 Protein of unknown function DUF2138 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 SUPERFAMILY SSF52954 329 423 3.11E-25 T 21-04-2016 IPR004154 Anticodon-binding SDY_2710 2c93b2232c7098f025006749d049c5d4 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 2.8E-156 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 SUPERFAMILY SSF55681 5 318 1.49E-104 T 21-04-2016 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.593 T 21-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Pfam PF03129 Anticodon binding domain 340 420 4.2E-10 T 21-04-2016 IPR004154 Anticodon-binding SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-46 T 21-04-2016 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 PANTHER PTHR11476 2 424 7.4E-239 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Gene3D G3DSA:3.30.930.10 4 185 8.0E-99 T 21-04-2016 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Gene3D G3DSA:3.30.930.10 221 320 8.0E-99 T 21-04-2016 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 PANTHER PTHR11476:SF9 2 424 7.4E-239 T 21-04-2016 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 PIRSF PIRSF001549 2 423 4.3E-130 T 21-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SDY_2710 2c93b2232c7098f025006749d049c5d4 424 Gene3D G3DSA:3.40.50.800 328 422 1.2E-32 T 21-04-2016 IPR004154 Anticodon-binding SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.3E-68 T 21-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 4.1E-22 T 21-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 PANTHER PTHR30239 1 162 2.8E-96 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 Gene3D G3DSA:3.30.70.1150 83 162 3.9E-26 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 Gene3D G3DSA:3.30.70.260 1 76 8.3E-36 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 SUPERFAMILY SSF55021 79 162 4.27E-24 T 21-04-2016 SDY_0108 b7b1dbede79542485fbae1a5745d196a 163 Pfam PF13710 ACT domain 12 73 2.7E-15 T 21-04-2016 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 SUPERFAMILY SSF55120 28 206 2.72E-43 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 PANTHER PTHR21600 150 207 1.5E-100 T 21-04-2016 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 PANTHER PTHR21600 1 132 1.5E-100 T 21-04-2016 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 PANTHER PTHR21600:SF23 150 207 1.5E-100 T 21-04-2016 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 PANTHER PTHR21600:SF23 1 132 1.5E-100 T 21-04-2016 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 8.5E-61 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_2017 e51a5ea08e95e15cbe647a91d1c12ecd 207 Pfam PF00849 RNA pseudouridylate synthase 31 176 4.9E-13 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Gene3D G3DSA:1.20.1560.10 16 323 6.5E-53 T 21-04-2016 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Gene3D G3DSA:1.20.1560.10 637 946 6.9E-67 T 21-04-2016 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Gene3D G3DSA:3.40.50.300 962 1195 7.1E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Gene3D G3DSA:3.40.50.300 341 570 6.5E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SUPERFAMILY SSF90123 636 946 1.26E-65 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SUPERFAMILY SSF90123 16 322 4.84E-54 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SUPERFAMILY SSF52540 337 579 6.57E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SUPERFAMILY SSF52540 956 1199 1.81E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 PANTHER PTHR24221 478 1216 4.1E-190 T 21-04-2016 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Pfam PF00005 ABC transporter 358 511 8.2E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Pfam PF00005 ABC transporter 980 1129 1.2E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Pfam PF00664 ABC transporter transmembrane region 650 919 1.2E-37 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 Pfam PF00664 ABC transporter transmembrane region 30 296 1.4E-30 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SMART SM00382 367 558 4.9E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1025 8a4e2c76296a971a3f277c6c7d089be1 1219 SMART SM00382 989 1192 9.0E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 PRINTS PR00163 Rubredoxin signature 425 441 5.8E-7 T 21-04-2016 IPR024935 Rubredoxin domain GO:0005506 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 PRINTS PR00163 Rubredoxin signature 455 471 5.8E-7 T 21-04-2016 IPR024935 Rubredoxin domain GO:0005506 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 475 93.631 T 21-04-2016 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 UniPathway: UPA00638 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Gene3D G3DSA:3.60.15.10 4 246 9.6E-91 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 PANTHER PTHR32145:SF2 1 469 1.2E-242 T 21-04-2016 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 PIRSF PIRSF005243 1 399 6.5E-163 T 21-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Gene3D G3DSA:2.20.28.10 425 474 1.4E-21 T 21-04-2016 IPR004039 Rubredoxin-type fold SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Gene3D G3DSA:3.40.50.360 249 394 3.5E-51 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 SUPERFAMILY SSF56281 8 285 2.1E-51 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 SUPERFAMILY SSF52218 251 396 1.08E-34 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 SMART SM00849 34 210 1.7E-28 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Pfam PF00301 Rubredoxin 425 471 7.9E-21 T 21-04-2016 IPR024935 Rubredoxin domain GO:0005506 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Pfam PF00258 Flavodoxin 256 388 1.8E-12 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 SUPERFAMILY SSF57802 425 475 1.36E-18 T 21-04-2016 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 PANTHER PTHR32145 1 469 1.2E-242 T 21-04-2016 SDY_2907 9b30b09daccaa2243b96b7b722239bf1 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 172 3.4E-11 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_0929 5e6a0c788d0c833da07e1ed249e16d3e 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 31.214 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 SDY_0929 5e6a0c788d0c833da07e1ed249e16d3e 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 3.0E-72 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 SDY_0929 5e6a0c788d0c833da07e1ed249e16d3e 150 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 4.9E-75 T 21-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 SUPERFAMILY SSF55120 77 323 2.26E-79 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 3.3E-111 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 3.6E-32 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 SMART SM00363 18 83 1.1E-11 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 Gene3D G3DSA:3.10.290.10 18 68 4.1E-12 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 PANTHER PTHR11079:SF73 6 323 3.2E-162 T 21-04-2016 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 Pfam PF01479 S4 domain 18 65 2.5E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 SUPERFAMILY SSF55174 17 69 9.92E-11 T 21-04-2016 SDY_2837 3fd5211b93262040d627b76a8eb895cd 326 PANTHER PTHR11079 6 323 3.2E-162 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Pfam PF04348 LppC putative lipoprotein 346 672 1.9E-86 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 672 36.313 T 21-04-2016 IPR007443 Penicillin-binding protein activator LpoA SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:3.40.50.2300 354 424 1.4E-75 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:3.40.50.2300 601 665 1.4E-75 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:3.40.50.2300 256 289 1.4E-75 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:3.40.50.2300 425 485 2.1E-55 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:3.40.50.2300 525 600 2.1E-55 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 PANTHER PTHR38038:SF1 316 678 1.9E-235 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 PANTHER PTHR38038:SF1 2 287 1.9E-235 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 SUPERFAMILY SSF48435 50 148 1.01E-5 T 21-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 PANTHER PTHR38038 316 678 1.9E-235 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 PANTHER PTHR38038 2 287 1.9E-235 T 21-04-2016 SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 SUPERFAMILY SSF53822 258 287 8.95E-72 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 SUPERFAMILY SSF53822 523 676 8.95E-72 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 SUPERFAMILY SSF53822 352 484 8.95E-72 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3326 b0794eb59186382dae5e19fbf3ec22f1 678 Gene3D G3DSA:1.25.40.10 69 141 1.1E-4 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 7.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 3.3E-10 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 8.3E-22 T 21-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.2E-131 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Gene3D G3DSA:2.160.10.10 141 309 1.6E-41 T 21-04-2016 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Gene3D G3DSA:2.160.10.10 99 140 5.9E-12 T 21-04-2016 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.84 T 21-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 SUPERFAMILY SSF51161 32 316 1.33E-86 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_0195 741fa666fa9fd650190bc1458057cfdf 341 PANTHER PTHR22572 79 295 2.6E-63 T 21-04-2016 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 SUPERFAMILY SSF81342 9 226 4.71E-40 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 Pfam PF01292 Prokaryotic cytochrome b561 14 220 3.8E-36 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 225 7.9E-79 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 Gene3D G3DSA:1.20.950.20 11 226 4.9E-27 T 21-04-2016 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 19 36 - T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PANTHER PTHR30485:SF0 1 235 3.3E-130 T 21-04-2016 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 4.0E-47 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 4.0E-47 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 4.0E-47 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 132 151 4.0E-47 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 212 225 4.0E-47 T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 PANTHER PTHR30485 1 235 3.3E-130 T 21-04-2016 SDY_0949 ab1cbcd0eedf4d4c97cc1238f46674f4 235 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 181 198 - T 21-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 SUPERFAMILY SSF64288 63 240 4.87E-37 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 Pfam PF07702 UTRA domain 96 235 3.7E-31 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.9E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PANTHER PTHR11751 9 78 5.7E-48 T 21-04-2016 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PANTHER PTHR11751 125 148 5.7E-48 T 21-04-2016 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 1.2E-104 T 21-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-8 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-8 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PANTHER PTHR11751:SF292 9 78 5.7E-48 T 21-04-2016 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 PANTHER PTHR11751:SF292 125 148 5.7E-48 T 21-04-2016 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 Gene3D G3DSA:3.40.1410.10 83 241 4.9E-47 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 SUPERFAMILY SSF46785 8 79 3.82E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 SMART SM00345 17 75 1.6E-24 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 Gene3D G3DSA:1.10.10.10 9 82 4.2E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4114 2e5d7652ae632ba557c790a00a2a6d41 241 SMART SM00866 96 236 8.0E-25 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 SUPERFAMILY SSF56014 265 350 9.81E-10 T 21-04-2016 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 Gene3D G3DSA:3.20.20.70 30 132 9.2E-10 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.714 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 6.7E-126 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 PANTHER PTHR30454 1 371 3.4E-228 T 21-04-2016 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 PIRSF PIRSF004640 1 363 3.1E-148 T 21-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 SUPERFAMILY SSF51717 15 208 1.49E-10 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SDY_2711 2dc721d497574c6f2ecc02aeb166170b 372 Pfam PF04551 GcpE protein 14 353 9.8E-132 T 21-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 PANTHER PTHR11063 1 417 7.3E-190 T 21-04-2016 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 SUPERFAMILY SSF53720 3 416 1.83E-116 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 PIRSF PIRSF000151 1 417 2.4E-179 T 21-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 Gene3D G3DSA:3.40.605.10 375 416 2.3E-103 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 Gene3D G3DSA:3.40.605.10 2 220 2.3E-103 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 1.8E-202 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 21-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 PANTHER PTHR11063:SF8 1 417 7.3E-190 T 21-04-2016 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 Pfam PF00171 Aldehyde dehydrogenase family 8 282 4.7E-17 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.83 T 21-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0473 ef83f591e52b8f06cd26fd860b498b23 417 Gene3D G3DSA:3.40.309.10 223 374 8.8E-43 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1006 f30f1bc31e719fe96f1c52e030425a15 280 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 1.9E-59 T 21-04-2016 IPR031339 Domain of unknown function DUF4942 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Gene3D G3DSA:3.40.50.300 201 382 3.2E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Gene3D G3DSA:3.40.50.300 3 159 2.3E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 PANTHER PTHR11649 1 459 7.2E-167 T 21-04-2016 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.5E-21 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 368 3.3E-24 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.752 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.4E-29 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 8.4E-25 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 PANTHER PTHR11649:SF5 1 459 7.2E-167 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 5.9E-179 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Gene3D G3DSA:3.30.300.20 383 459 5.5E-23 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 7.0E-26 T 21-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 SUPERFAMILY SSF52540 137 167 3.9E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 SUPERFAMILY SSF52540 200 464 3.9E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 PIRSF PIRSF006485 1 466 4.5E-179 T 21-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SDY_2707 13292bcd5bddf2af73fa0d130898f4eb 490 SUPERFAMILY SSF52540 4 168 9.85E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Gene3D G3DSA:3.40.50.880 1040 1263 1.6E-12 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Gene3D G3DSA:3.30.1330.10 211 421 1.3E-39 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Gene3D G3DSA:3.30.1330.10 645 810 2.2E-16 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF52317 1035 1293 2.87E-100 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF56042 432 615 6.73E-52 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF55326 221 428 1.15E-64 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 21-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.794 T 21-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF56042 818 1033 4.64E-58 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 8.3E-26 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 966 9.8E-14 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 PANTHER PTHR10099:SF5 1 1295 0.0 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF55326 618 816 1.67E-66 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF82697 1 152 4.29E-54 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SUPERFAMILY SSF109736 155 220 7.45E-22 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 SMART SM01211 1039 1294 2.0E-161 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 PANTHER PTHR10099 1 1295 0.0 T 21-04-2016 SDY_2747 2babe8d264fb722e1200ce75b85346b1 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 3.9E-105 T 21-04-2016 SDY_0616 410a76889d7afbbc1f5356a9df0008ea 101 PANTHER PTHR33293 50 101 1.0E-15 T 21-04-2016 SDY_0616 410a76889d7afbbc1f5356a9df0008ea 101 Pfam PF12759 InsA C-terminal domain 53 98 1.5E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0616 410a76889d7afbbc1f5356a9df0008ea 101 SUPERFAMILY SSF46689 62 96 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0616 410a76889d7afbbc1f5356a9df0008ea 101 Gene3D G3DSA:1.10.10.60 63 96 6.3E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3730 17f9507d7498452f8d146a23c5456364 257 SUPERFAMILY SSF55811 80 241 7.18E-40 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3730 17f9507d7498452f8d146a23c5456364 257 Pfam PF00293 NUDIX domain 132 232 1.5E-16 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_3730 17f9507d7498452f8d146a23c5456364 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.9E-10 T 21-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 SDY_3730 17f9507d7498452f8d146a23c5456364 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.275 T 21-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 SDY_3730 17f9507d7498452f8d146a23c5456364 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_3730 17f9507d7498452f8d146a23c5456364 257 PANTHER PTHR22769:SF7 85 257 1.7E-59 T 21-04-2016 SDY_3730 17f9507d7498452f8d146a23c5456364 257 SUPERFAMILY SSF55811 3 96 1.95E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3730 17f9507d7498452f8d146a23c5456364 257 Gene3D G3DSA:3.90.79.10 93 235 4.1E-41 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3730 17f9507d7498452f8d146a23c5456364 257 PANTHER PTHR22769 85 257 1.7E-59 T 21-04-2016 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 PANTHER PTHR10578 7 377 6.2E-166 T 21-04-2016 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 SUPERFAMILY SSF51395 6 375 9.77E-100 T 21-04-2016 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 PANTHER PTHR10578:SF65 7 377 6.2E-166 T 21-04-2016 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.0E-125 T 21-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.607 T 21-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 21-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 Gene3D G3DSA:3.20.20.70 6 376 1.2E-134 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4038 233b7d2f973bb8e759d4c812aff12c6b 396 PIRSF PIRSF000138 2 379 6.1E-121 T 21-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 PANTHER PTHR12029 3 343 8.3E-216 T 21-04-2016 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 SMART SM00967 109 184 7.4E-9 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 SUPERFAMILY SSF75217 185 343 6.8E-36 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 PIRSF PIRSF006280 1 345 1.9E-176 T 21-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 Gene3D G3DSA:3.30.1330.30 102 178 6.3E-9 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 Pfam PF00588 SpoU rRNA Methylase family 199 336 6.5E-28 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 SUPERFAMILY SSF55315 103 179 3.3E-10 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 PANTHER PTHR12029:SF57 3 343 8.3E-216 T 21-04-2016 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 1.4E-12 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SDY_2824 0daba42f9cb1b20c55ca742c40e802af 345 Gene3D G3DSA:3.40.1280.10 191 343 4.8E-35 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 SMART SM00257 97 142 4.4E-6 T 21-04-2016 IPR018392 LysM domain SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 Pfam PF01476 LysM domain 98 141 2.3E-7 T 21-04-2016 IPR018392 LysM domain SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.4E-9 T 21-04-2016 IPR013731 Opacity-associated protein A, N-terminal SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 SUPERFAMILY SSF54106 96 139 9.42E-5 T 21-04-2016 IPR018392 LysM domain SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 Gene3D G3DSA:2.70.70.10 266 409 2.3E-50 T 21-04-2016 SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 Gene3D G3DSA:3.10.350.10 97 139 8.5E-7 T 21-04-2016 IPR018392 LysM domain SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 Pfam PF01551 Peptidase family M23 313 407 1.0E-32 T 21-04-2016 IPR016047 Peptidase M23 SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 SUPERFAMILY SSF51261 169 408 5.75E-69 T 21-04-2016 IPR011055 Duplicated hybrid motif SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 PANTHER PTHR21666:SF207 1 434 3.1E-282 T 21-04-2016 SDY_1143 a3572d1d852ddec1a29937297a97f76f 440 PANTHER PTHR21666 1 434 3.1E-282 T 21-04-2016 SDY_3156 94863f747d5f2779263bd21a101a069a 387 Gene3D G3DSA:3.40.50.1270 175 371 5.6E-81 T 21-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PANTHER PTHR11406 1 387 2.6E-201 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 21-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 SUPERFAMILY SSF53748 3 383 1.3E-144 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PIRSF PIRSF000724 1 387 1.5E-134 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.202 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 Gene3D G3DSA:3.40.50.1260 5 174 2.1E-64 T 21-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.8E-82 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_3156 94863f747d5f2779263bd21a101a069a 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.1E-138 T 21-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SDY_2165 354ab63b41dba23df9aec162e9e69519 156 PANTHER PTHR37805 1 156 7.1E-88 T 21-04-2016 SDY_2165 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.2E-25 T 21-04-2016 IPR009921 Domain of unknown function DUF1456 SDY_2165 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 150 1.1E-20 T 21-04-2016 IPR009921 Domain of unknown function DUF1456 SDY_2165 354ab63b41dba23df9aec162e9e69519 156 PANTHER PTHR37805:SF1 1 156 7.1E-88 T 21-04-2016 SDY_1252 9339111df5a57673af88135502921e3c 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.8E-179 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 Gene3D G3DSA:3.40.50.300 4 130 6.8E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1252 9339111df5a57673af88135502921e3c 363 Gene3D G3DSA:3.40.50.300 201 267 6.8E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1252 9339111df5a57673af88135502921e3c 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 3.4E-21 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 PIRSF PIRSF006641 1 363 5.5E-159 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 21-04-2016 IPR013029 Domain of unknown function DUF933 SDY_1252 9339111df5a57673af88135502921e3c 363 SUPERFAMILY SSF52540 3 301 2.56E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1252 9339111df5a57673af88135502921e3c 363 Gene3D G3DSA:1.10.150.300 131 200 5.5E-28 T 21-04-2016 IPR023192 TGS-like domain SDY_1252 9339111df5a57673af88135502921e3c 363 SUPERFAMILY SSF81271 279 359 4.14E-36 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SDY_1252 9339111df5a57673af88135502921e3c 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 47.077 T 21-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 Gene3D G3DSA:3.10.20.30 268 363 2.5E-50 T 21-04-2016 IPR012675 Beta-grasp domain SDY_1252 9339111df5a57673af88135502921e3c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_1252 9339111df5a57673af88135502921e3c 363 PANTHER PTHR23305 1 363 5.4E-216 T 21-04-2016 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.5E-27 T 21-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 PANTHER PTHR11538 92 327 5.9E-120 T 21-04-2016 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-107 T 21-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 SUPERFAMILY SSF55681 92 327 7.96E-82 T 21-04-2016 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 8.9E-119 T 21-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 Gene3D G3DSA:3.30.930.10 9 327 8.2E-135 T 21-04-2016 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 SUPERFAMILY SSF46589 14 99 2.51E-22 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SDY_1809 e60dfb245105b8249cec3e1809d90b1c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.022 T 21-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SDY_1065 157e795ae6bc657e9ef5ca7ef0aca5d2 349 PANTHER PTHR35191 2 168 4.9E-13 T 21-04-2016 SDY_1065 157e795ae6bc657e9ef5ca7ef0aca5d2 349 Pfam PF08400 Prophage tail fibre N-terminal 1 132 3.3E-71 T 21-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 PIRSF PIRSF002854 2 272 3.0E-94 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 PANTHER PTHR30429:SF1 3 272 7.4E-140 T 21-04-2016 SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 Pfam PF03180 NLPA lipoprotein 34 272 9.8E-92 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 272 5.4E-149 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 SUPERFAMILY SSF53850 34 272 1.0E-75 T 21-04-2016 SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 Gene3D G3DSA:3.40.190.10 31 162 3.3E-53 T 21-04-2016 SDY_4499 f35282b02ea003a2068200567eb2d1cc 272 PANTHER PTHR30429 3 272 7.4E-140 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_4109 871bc0247fd44481964047fde32973d0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 7.3E-64 T 21-04-2016 IPR004624 PhnA protein SDY_4109 871bc0247fd44481964047fde32973d0 111 Pfam PF03831 PhnA domain 44 111 5.2E-35 T 21-04-2016 IPR013988 PhnA protein, C-terminal SDY_4109 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.20.25.10 1 40 1.2E-20 T 21-04-2016 SDY_4109 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.30.30.40 42 110 3.7E-39 T 21-04-2016 SDY_4109 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF57783 1 36 4.76E-14 T 21-04-2016 SDY_4109 871bc0247fd44481964047fde32973d0 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 2.0E-15 T 21-04-2016 IPR013987 PhnA protein, N-terminal SDY_4109 871bc0247fd44481964047fde32973d0 111 PANTHER PTHR30305 1 111 4.1E-89 T 21-04-2016 SDY_4109 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF82057 39 110 7.78E-30 T 21-04-2016 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 Gene3D G3DSA:3.40.718.10 3 327 3.7E-138 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 1.3E-108 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 PANTHER PTHR30004:SF5 1 327 5.8E-225 T 21-04-2016 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.3E-130 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 PANTHER PTHR30004 1 327 5.8E-225 T 21-04-2016 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.324 T 21-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SDY_0077 36ecf62e93c0d1b414eefffb2d4472a9 329 SUPERFAMILY SSF53659 5 327 4.64E-116 T 21-04-2016 SDY_0280 3535721a08017d4c29dac9000cb4fc0b 129 Gene3D G3DSA:3.10.290.10 3 76 3.7E-28 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_0280 3535721a08017d4c29dac9000cb4fc0b 129 PANTHER PTHR32319 15 78 1.0E-27 T 21-04-2016 SDY_0280 3535721a08017d4c29dac9000cb4fc0b 129 SUPERFAMILY SSF55174 4 76 9.29E-20 T 21-04-2016 SDY_0280 3535721a08017d4c29dac9000cb4fc0b 129 Pfam PF13275 S4 domain 16 76 2.5E-23 T 21-04-2016 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 Pfam PF00294 pfkB family carbohydrate kinase 12 296 8.1E-65 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 Gene3D G3DSA:3.40.1190.20 35 305 1.7E-75 T 21-04-2016 IPR029056 Ribokinase-like SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 SUPERFAMILY SSF53613 4 297 1.17E-63 T 21-04-2016 IPR029056 Ribokinase-like SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 PANTHER PTHR10584:SF54 13 309 6.0E-143 T 21-04-2016 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 4.5E-97 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 PANTHER PTHR10584 13 309 6.0E-143 T 21-04-2016 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_1816 9cb20c99adef702b28d37e00f2fa912d 309 PIRSF PIRSF000535 1 309 5.7E-112 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 Gene3D G3DSA:1.10.10.10 1 77 3.2E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.3E-29 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 PANTHER PTHR30514:SF5 1 275 6.6E-191 T 21-04-2016 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 Gene3D G3DSA:3.40.50.10490 103 262 1.1E-31 T 21-04-2016 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 PANTHER PTHR30514 1 275 6.6E-191 T 21-04-2016 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 SUPERFAMILY SSF46689 1 77 3.4E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 Pfam PF01380 SIS domain 128 258 1.2E-31 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_2751 2a9b1088a0e26eae242a6f46c15254b2 282 SUPERFAMILY SSF53697 105 278 1.32E-30 T 21-04-2016 SDY_3235 1b603043e814c418d81310d040e54c83 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 2.1E-64 T 21-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SDY_3235 1b603043e814c418d81310d040e54c83 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.5E-15 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_3235 1b603043e814c418d81310d040e54c83 477 Gene3D G3DSA:3.40.1190.20 13 313 6.0E-69 T 21-04-2016 IPR029056 Ribokinase-like SDY_3235 1b603043e814c418d81310d040e54c83 477 SUPERFAMILY SSF52374 340 471 7.32E-22 T 21-04-2016 SDY_3235 1b603043e814c418d81310d040e54c83 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_3235 1b603043e814c418d81310d040e54c83 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.498 T 21-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SDY_3235 1b603043e814c418d81310d040e54c83 477 Gene3D G3DSA:3.40.50.620 340 461 6.5E-36 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3235 1b603043e814c418d81310d040e54c83 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 6.4E-130 T 21-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SDY_3235 1b603043e814c418d81310d040e54c83 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_3235 1b603043e814c418d81310d040e54c83 477 PANTHER PTHR10584:SF159 1 338 5.2E-158 T 21-04-2016 SDY_3235 1b603043e814c418d81310d040e54c83 477 Pfam PF00294 pfkB family carbohydrate kinase 12 305 3.5E-59 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_3235 1b603043e814c418d81310d040e54c83 477 SUPERFAMILY SSF53613 12 309 2.03E-59 T 21-04-2016 IPR029056 Ribokinase-like SDY_3235 1b603043e814c418d81310d040e54c83 477 PANTHER PTHR10584 1 338 5.2E-158 T 21-04-2016 SDY_0722 4e33049601d576a599f787c6ebfa730b 119 Pfam PF01527 Transposase 21 93 7.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0722 4e33049601d576a599f787c6ebfa730b 119 SUPERFAMILY SSF46689 20 112 1.97E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0722 4e33049601d576a599f787c6ebfa730b 119 PANTHER PTHR33215:SF4 20 119 1.5E-61 T 21-04-2016 SDY_0722 4e33049601d576a599f787c6ebfa730b 119 Gene3D G3DSA:1.10.10.60 26 109 4.6E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0722 4e33049601d576a599f787c6ebfa730b 119 PANTHER PTHR33215 20 119 1.5E-61 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Gene3D G3DSA:3.50.50.60 146 246 7.9E-31 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 8.1E-65 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 SUPERFAMILY SSF55424 336 450 5.84E-37 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-35 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PANTHER PTHR22912:SF106 1 450 2.2E-257 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Gene3D G3DSA:3.50.50.60 247 333 3.9E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Gene3D G3DSA:3.30.390.30 338 450 2.5E-45 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 6.5E-69 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 Gene3D G3DSA:3.50.50.60 3 143 4.2E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PIRSF PIRSF000350 1 447 4.7E-87 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 7.4E-218 T 21-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PANTHER PTHR22912 1 450 2.2E-257 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.5E-27 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.5E-27 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.5E-27 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-27 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.5E-27 T 21-04-2016 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 SUPERFAMILY SSF51905 1 365 2.88E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3562 692ca7dc7b05f4aacd0053af08b9561d 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 21-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 217 231 2.2E-15 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 88 104 2.2E-15 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 271 284 2.2E-15 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 169 181 - T 21-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 PANTHER PTHR10629 1 471 1.2E-122 T 21-04-2016 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 Gene3D G3DSA:3.90.120.10 311 438 6.8E-29 T 21-04-2016 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 Pfam PF00145 C-5 cytosine-specific DNA methylase 87 448 7.1E-76 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 89 450 2.5E-104 T 21-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 SUPERFAMILY SSF53335 87 450 4.29E-79 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 PANTHER PTHR10629:SF31 1 471 1.2E-122 T 21-04-2016 SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 Gene3D G3DSA:3.40.50.150 87 310 2.8E-52 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1045 e646e40fad75d9b19b5f9100089e2e51 472 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 432 450 - T 21-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 Gene3D G3DSA:2.40.440.10 90 231 3.0E-36 T 21-04-2016 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 SUPERFAMILY SSF141523 174 231 8.5E-29 T 21-04-2016 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 SUPERFAMILY SSF141523 95 146 8.5E-29 T 21-04-2016 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 PANTHER PTHR30582 32 309 1.8E-138 T 21-04-2016 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 3.5E-20 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_2243 c1ad5b8dbcc95a1a86a0187bc88d6f9e 310 PANTHER PTHR30582:SF8 32 309 1.8E-138 T 21-04-2016 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 151 2.5E-26 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 Pfam PF00107 Zinc-binding dehydrogenase 193 315 8.0E-22 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 PANTHER PTHR11695:SF582 30 349 2.6E-110 T 21-04-2016 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 186 213 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 Gene3D G3DSA:3.40.50.720 190 298 2.5E-18 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4288 fc51c0639671ca3b7ca233550d873890 353 Gene3D G3DSA:3.90.180.10 10 189 8.3E-58 T 21-04-2016 IPR011032 GroES-like SDY_4288 fc51c0639671ca3b7ca233550d873890 353 PANTHER PTHR11695 30 349 2.6E-110 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 SUPERFAMILY SSF50129 14 198 7.46E-45 T 21-04-2016 IPR011032 GroES-like SDY_4288 fc51c0639671ca3b7ca233550d873890 353 SUPERFAMILY SSF51735 156 319 2.36E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4288 fc51c0639671ca3b7ca233550d873890 353 SMART SM00829 27 349 6.1E-6 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_4288 fc51c0639671ca3b7ca233550d873890 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 76 90 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 PANTHER PTHR12715 3 292 4.3E-151 T 21-04-2016 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 PANTHER PTHR12715:SF7 3 292 4.3E-151 T 21-04-2016 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 SUPERFAMILY SSF103481 48 140 1.18E-7 T 21-04-2016 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 Pfam PF00892 EamA-like transporter family 158 285 6.5E-7 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 Pfam PF00892 EamA-like transporter family 6 137 1.1E-7 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1603 fbbcbdfbe1cefaa5bb637562ab1e2f06 293 SUPERFAMILY SSF103481 191 291 4.58E-5 T 21-04-2016 SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 32.79 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 Gene3D G3DSA:3.40.50.10330 1 149 8.1E-42 T 21-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 Pfam PF01513 ATP-NAD kinase 8 271 2.5E-80 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 SUPERFAMILY SSF111331 7 289 1.14E-91 T 21-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 Gene3D G3DSA:2.60.200.30 150 261 7.9E-42 T 21-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SDY_2788 5f88543a46bc3dea58f73dc46fc59064 292 PANTHER PTHR20275 5 291 6.7E-112 T 21-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SDY_0563 a820be70b72c542eebaa0005e17a31f8 193 Pfam PF04390 Lipopolysaccharide-assembly 11 159 5.7E-22 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SDY_0563 a820be70b72c542eebaa0005e17a31f8 193 Gene3D G3DSA:3.30.160.150 19 171 1.6E-58 T 21-04-2016 SDY_0563 a820be70b72c542eebaa0005e17a31f8 193 PANTHER PTHR38098:SF1 1 189 9.3E-70 T 21-04-2016 SDY_0563 a820be70b72c542eebaa0005e17a31f8 193 PANTHER PTHR38098 1 189 9.3E-70 T 21-04-2016 SDY_0563 a820be70b72c542eebaa0005e17a31f8 193 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 26.176 T 21-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SDY_2650 45c06b97dca8ec910472e97dafc9c130 191 Pfam PF00293 NUDIX domain 45 163 1.5E-9 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_2650 45c06b97dca8ec910472e97dafc9c130 191 SUPERFAMILY SSF55811 8 188 2.71E-50 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_2650 45c06b97dca8ec910472e97dafc9c130 191 PANTHER PTHR11839 12 189 6.2E-44 T 21-04-2016 SDY_2650 45c06b97dca8ec910472e97dafc9c130 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 2 186 2.2E-81 T 21-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 SDY_2650 45c06b97dca8ec910472e97dafc9c130 191 Gene3D G3DSA:3.90.79.10 4 186 1.7E-58 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 Gene3D G3DSA:3.50.50.60 110 308 1.5E-35 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.5E-78 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 SUPERFAMILY SSF51905 2 315 2.39E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 21-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.3E-41 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.3E-41 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.3E-41 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.3E-41 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.3E-41 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 Gene3D G3DSA:3.50.50.60 4 109 2.5E-35 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PANTHER PTHR22912:SF48 1 315 3.7E-168 T 21-04-2016 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.1E-125 T 21-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 3.4E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2373 7adccd89b1dd7e60f54a814b65b92b41 321 PANTHER PTHR22912 1 315 3.7E-168 T 21-04-2016 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 PANTHER PTHR11587 1 224 1.1E-107 T 21-04-2016 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 PANTHER PTHR11587:SF3 1 224 1.1E-107 T 21-04-2016 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.361 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 PIRSF PIRSF006293 1 226 1.3E-88 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 Gene3D G3DSA:3.40.50.620 1 222 3.3E-86 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 SUPERFAMILY SSF52402 1 221 1.39E-71 T 21-04-2016 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 5.4E-89 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_0286 95ec019aecd147838bc1b88c5b3057b2 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 3.2E-85 T 21-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 Gene3D G3DSA:3.90.1550.10 4 202 8.9E-71 T 21-04-2016 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 6.2E-7 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.651 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 2.8E-84 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 21-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-24 T 21-04-2016 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 SUPERFAMILY SSF55681 4 204 1.41E-68 T 21-04-2016 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 PIRSF PIRSF016262 2 210 4.5E-57 T 21-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0552 ee87fe2b237539e2d51ffc7a7dce4e35 213 PANTHER PTHR10993 1 204 1.6E-82 T 21-04-2016 SDY_3582 9b33e43b9794092fbdc9e904db3cce71 162 Gene3D G3DSA:1.10.10.10 61 108 1.0E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3377 1872ae3efe3ef0741725f2783ac4bb05 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 308 7.6E-106 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SDY_3377 1872ae3efe3ef0741725f2783ac4bb05 321 PANTHER PTHR10846 19 312 1.1E-79 T 21-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SDY_3377 1872ae3efe3ef0741725f2783ac4bb05 321 Pfam PF01699 Sodium/calcium exchanger protein 4 143 3.8E-28 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SDY_3377 1872ae3efe3ef0741725f2783ac4bb05 321 Pfam PF01699 Sodium/calcium exchanger protein 171 313 8.3E-26 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:3.40.50.300 5 110 1.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:3.40.50.300 191 285 1.5E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:1.10.10.160 114 190 1.0E-26 T 21-04-2016 IPR013986 DExx box DNA helicase domain SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:1.10.486.10 388 541 1.5E-52 T 21-04-2016 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 21-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.8E-76 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.0E-75 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 SUPERFAMILY SSF52540 7 642 1.88E-182 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:3.40.50.300 552 642 5.6E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 Gene3D G3DSA:3.40.50.300 286 387 5.6E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 PANTHER PTHR11070 6 718 1.3E-263 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_3932 8257deef855a5c5ae3f4a6a6f6be6a69 720 PANTHER PTHR11070:SF7 6 718 1.3E-263 T 21-04-2016 SDY_1802 1ae487297596f10ae941cb22d293fbd0 237 PANTHER PTHR33121 1 237 6.6E-159 T 21-04-2016 SDY_1802 1ae487297596f10ae941cb22d293fbd0 237 Pfam PF00563 EAL domain 13 222 1.6E-8 T 21-04-2016 IPR001633 EAL domain SDY_1802 1ae487297596f10ae941cb22d293fbd0 237 Gene3D G3DSA:3.20.20.450 13 236 3.9E-7 T 21-04-2016 IPR001633 EAL domain SDY_1802 1ae487297596f10ae941cb22d293fbd0 237 SUPERFAMILY SSF141868 13 230 4.58E-11 T 21-04-2016 IPR001633 EAL domain SDY_1802 1ae487297596f10ae941cb22d293fbd0 237 PANTHER PTHR33121:SF2 1 237 6.6E-159 T 21-04-2016 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 Gene3D G3DSA:2.40.40.10 76 163 1.7E-14 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 Gene3D G3DSA:2.40.40.10 166 353 3.8E-47 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 SMART SM00925 125 257 2.4E-70 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 Pfam PF03562 MltA specific insert domain 93 257 5.4E-41 T 21-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 PANTHER PTHR30124 1 356 1.8E-150 T 21-04-2016 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 PANTHER PTHR30124:SF0 1 356 1.8E-150 T 21-04-2016 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 Pfam PF06725 3D domain 277 354 3.5E-25 T 21-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SDY_3031 a9905b7d21691c9609b5387fdbe6ecc9 365 SUPERFAMILY SSF50685 25 353 1.85E-116 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SDY_0071 e516a34832711cfcefe429a166a09792 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.3E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 1.3E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.3E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.3E-14 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 Gene3D G3DSA:3.40.430.10 1 159 6.4E-58 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain SDY_0071 e516a34832711cfcefe429a166a09792 159 SUPERFAMILY SSF53597 1 159 1.7E-54 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain SDY_0071 e516a34832711cfcefe429a166a09792 159 PIRSF PIRSF000194 1 159 9.0E-56 T 21-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 Pfam PF00186 Dihydrofolate reductase 1 158 3.2E-57 T 21-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 PANTHER PTHR22778:SF16 1 159 3.1E-47 T 21-04-2016 SDY_0071 e516a34832711cfcefe429a166a09792 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 21-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_0071 e516a34832711cfcefe429a166a09792 159 PANTHER PTHR22778 1 159 3.1E-47 T 21-04-2016 SDY_P154 be7649092fc4752b46ba59caf88ca03f 80 SUPERFAMILY SSF53756 2 79 3.27E-24 T 21-04-2016 SDY_P154 be7649092fc4752b46ba59caf88ca03f 80 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 1 79 6.3E-20 T 21-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_P154 be7649092fc4752b46ba59caf88ca03f 80 PANTHER PTHR21015:SF22 1 80 3.8E-24 T 21-04-2016 SDY_P154 be7649092fc4752b46ba59caf88ca03f 80 Gene3D G3DSA:3.40.50.2000 1 80 1.8E-27 T 21-04-2016 SDY_P154 be7649092fc4752b46ba59caf88ca03f 80 PANTHER PTHR21015 1 80 3.8E-24 T 21-04-2016 SDY_1208a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1208a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_1208a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1208a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_4694 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4694 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_4694 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4694 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY0156a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY0156a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY0156a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY0156a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_4741 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4741 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_4741 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4741 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_4686 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4686 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_4686 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4686 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_1083a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1083a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_1083a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1083a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_1513a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1513a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_1513a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1513a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_1178a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1178a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_1178a 036a7602ed755ed074b62b196fc6e206 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1178a 036a7602ed755ed074b62b196fc6e206 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 Gene3D G3DSA:3.20.20.30 8 326 1.0E-88 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 PANTHER PTHR30137:SF2 1 334 8.2E-154 T 21-04-2016 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 PANTHER PTHR30137 1 334 8.2E-154 T 21-04-2016 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 327 2.5E-131 T 21-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 SUPERFAMILY SSF51679 7 328 5.89E-85 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_3339 a6cbd90006cdf8386b419ce97c5e73d2 335 Pfam PF00296 Luciferase-like monooxygenase 20 299 1.4E-33 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_1211 993ee3ca2015ea3baabdd938b2342a33 108 PANTHER PTHR38109 13 106 3.9E-42 T 21-04-2016 SDY_1211 993ee3ca2015ea3baabdd938b2342a33 108 Pfam PF05166 YcgL domain 14 86 1.8E-33 T 21-04-2016 IPR027354 YcgL domain SDY_1211 993ee3ca2015ea3baabdd938b2342a33 108 SUPERFAMILY SSF160191 6 106 1.07E-42 T 21-04-2016 SDY_1211 993ee3ca2015ea3baabdd938b2342a33 108 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 12 93 3.0E-42 T 21-04-2016 IPR027354 YcgL domain SDY_1211 993ee3ca2015ea3baabdd938b2342a33 108 Hamap MF_01866 Protein YcgL [ycgL]. 12 99 27.448 T 21-04-2016 IPR027354 YcgL domain SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Gene3D G3DSA:3.30.70.610 269 342 2.3E-25 T 21-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Gene3D G3DSA:3.30.70.610 377 434 6.7E-21 T 21-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Gene3D G3DSA:3.30.465.10 107 268 6.1E-84 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Gene3D G3DSA:3.30.43.10 4 101 3.1E-8 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 PIRSF PIRSF000101 4 569 0.0 T 21-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Gene3D G3DSA:3.30.1370.20 435 519 3.4E-47 T 21-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Pfam PF01565 FAD binding domain 47 166 5.3E-8 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 SUPERFAMILY SSF55103 275 567 1.68E-118 T 21-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 7.1E-148 T 21-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 PANTHER PTHR11748:SF82 1 191 3.0E-60 T 21-04-2016 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 PANTHER PTHR11748:SF82 242 327 3.0E-60 T 21-04-2016 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 PANTHER PTHR11748 1 191 3.0E-60 T 21-04-2016 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 PANTHER PTHR11748 242 327 3.0E-60 T 21-04-2016 SDY_2155 ea5eff09af8cff5d0445ec2af9b33709 571 SUPERFAMILY SSF56176 10 271 2.52E-73 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_4434 1648efd4fa5fc6df08e6f9b560748622 493 PIRSF PIRSF006060 1 491 3.7E-62 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4434 1648efd4fa5fc6df08e6f9b560748622 493 Pfam PF13520 Amino acid permease 2 461 2.3E-28 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4434 1648efd4fa5fc6df08e6f9b560748622 493 PANTHER PTHR11785:SF322 1 469 9.2E-128 T 21-04-2016 SDY_4434 1648efd4fa5fc6df08e6f9b560748622 493 PANTHER PTHR11785 1 469 9.2E-128 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 4.7E-120 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 Gene3D G3DSA:3.40.50.300 10 193 2.4E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 SUPERFAMILY SSF52540 11 205 4.53E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.237 T 21-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 Gene3D G3DSA:3.30.300.20 194 294 2.7E-40 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 PANTHER PTHR11649 5 300 1.9E-121 T 21-04-2016 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 8.0E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 PANTHER PTHR11649:SF3 5 300 1.9E-121 T 21-04-2016 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 SUPERFAMILY SSF54814 182 297 1.96E-40 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 1.1E-41 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_2807 a1943c1130dc559111af1b268ff6aa9b 301 Pfam PF07650 KH domain 209 285 2.0E-19 T 21-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 SUPERFAMILY SSF54862 59 204 9.0E-26 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 155 196 1.5E-9 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 42 69 1.5E-9 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0873 ca994a507e551f1af2be17e8723917e9 231 PANTHER PTHR30176:SF3 3 230 1.2E-128 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.033 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 70 105 3.4E-10 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 3.5E-71 T 21-04-2016 IPR004494 MauM/NapG ferredoxin-type protein SDY_0873 ca994a507e551f1af2be17e8723917e9 231 PANTHER PTHR30176 3 230 1.2E-128 T 21-04-2016 SDY_0873 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 106 154 3.5E-8 T 21-04-2016 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 Gene3D G3DSA:3.90.226.10 59 278 4.9E-49 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.4E-62 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.8E-173 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.9E-50 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 SUPERFAMILY SSF52096 5 318 3.45E-103 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.552 T 21-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_0201 ecad122ea2e955a8f798d20bffccbf20 319 PANTHER PTHR22855 1 317 3.7E-136 T 21-04-2016 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 PANTHER PTHR34156 2 314 2.9E-259 T 21-04-2016 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 239 314 1.96E-18 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 2.0E-20 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.7E-17 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 119 174 1.1E-17 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 PANTHER PTHR34156:SF2 2 314 2.9E-259 T 21-04-2016 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 PIRSF PIRSF014774 1 314 2.1E-185 T 21-04-2016 IPR025539 YdgH protein SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 3 93 7.46E-22 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 107 177 8.5E-17 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 109 175 1.1E-24 T 21-04-2016 IPR025543 Dodecin-like SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 249 314 8.0E-23 T 21-04-2016 IPR025543 Dodecin-like SDY_1549 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 25 90 2.3E-23 T 21-04-2016 IPR025543 Dodecin-like SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 Pfam PF01979 Amidohydrolase family 50 379 2.4E-48 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 PIRSF PIRSF038994 1 382 6.0E-114 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.0E-183 T 21-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 PANTHER PTHR11113 1 382 4.5E-177 T 21-04-2016 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 SUPERFAMILY SSF51556 54 350 5.83E-101 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 Gene3D G3DSA:3.20.20.140 55 349 8.2E-97 T 21-04-2016 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 PANTHER PTHR11113:SF7 1 382 4.5E-177 T 21-04-2016 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 SUPERFAMILY SSF51338 1 53 5.76E-18 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 Gene3D G3DSA:2.30.40.10 350 366 8.1E-9 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_0611 4b985d456b31e2d9ee86d641bed7dd83 382 Gene3D G3DSA:2.30.40.10 2 54 8.1E-9 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.527 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Gene3D G3DSA:2.130.10.10 154 428 6.9E-75 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 21-04-2016 IPR011659 WD40-like Beta Propeller SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.2E-5 T 21-04-2016 IPR011659 WD40-like Beta Propeller SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0031 T 21-04-2016 IPR011659 WD40-like Beta Propeller SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.3E-10 T 21-04-2016 IPR011659 WD40-like Beta Propeller SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Gene3D G3DSA:3.40.50.10070 22 153 6.2E-51 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 PANTHER PTHR11731 160 428 3.1E-137 T 21-04-2016 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 PANTHER PTHR11731 1 121 3.1E-137 T 21-04-2016 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 PANTHER PTHR11731:SF123 160 428 3.1E-137 T 21-04-2016 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 PANTHER PTHR11731:SF123 1 121 3.1E-137 T 21-04-2016 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 SUPERFAMILY SSF69304 155 428 7.98E-56 T 21-04-2016 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 Pfam PF04052 TolB amino-terminal domain 23 121 4.5E-31 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 1.0E-156 T 21-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 SDY_0688 afc2516f7966b8e8e734a0263b1e3c45 430 SUPERFAMILY SSF52964 29 161 8.24E-40 T 21-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 PANTHER PTHR23508 6 228 0.0 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 PANTHER PTHR23508 266 478 0.0 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 Gene3D G3DSA:1.20.1250.20 17 202 2.4E-32 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 Gene3D G3DSA:1.20.1250.20 274 452 1.2E-15 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 56.061 T 21-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 PANTHER PTHR23508:SF3 6 228 0.0 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 PANTHER PTHR23508:SF3 266 478 0.0 T 21-04-2016 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 SUPERFAMILY SSF103473 267 452 5.75E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 SUPERFAMILY SSF103473 8 203 5.75E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 5.4E-195 T 21-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 SDY_3399 02271a4a98aa3eee8905f48dd3b3a47e 496 Pfam PF07690 Major Facilitator Superfamily 26 287 1.4E-24 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2410 22f1533ae602136109835e8942de9c67 269 Pfam PF00665 Integrase core domain 72 186 2.7E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2410 22f1533ae602136109835e8942de9c67 269 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2410 22f1533ae602136109835e8942de9c67 269 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_2410 22f1533ae602136109835e8942de9c67 269 SUPERFAMILY SSF53098 65 229 1.82E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2410 22f1533ae602136109835e8942de9c67 269 Pfam PF13276 HTH-like domain 5 47 4.6E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 5.3E-28 T 21-04-2016 IPR000362 Fumarate lyase family SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00149 Fumarate lyase superfamily signature 198 216 5.3E-28 T 21-04-2016 IPR000362 Fumarate lyase family SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00149 Fumarate lyase superfamily signature 289 316 5.3E-28 T 21-04-2016 IPR000362 Fumarate lyase family SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00149 Fumarate lyase superfamily signature 335 351 5.3E-28 T 21-04-2016 IPR000362 Fumarate lyase family SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00145 Argininosuccinate lyase family signature 193 213 1.6E-5 T 21-04-2016 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00145 Argininosuccinate lyase family signature 335 351 1.6E-5 T 21-04-2016 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PRINTS PR00145 Argininosuccinate lyase family signature 152 174 1.6E-5 T 21-04-2016 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 Pfam PF00206 Lyase 28 360 1.4E-117 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 Pfam PF10415 Fumarase C C-terminus 426 479 4.3E-17 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 ProSitePatterns PS00163 Fumarate lyases signature. 335 344 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 SUPERFAMILY SSF48557 17 473 5.3E-147 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PANTHER PTHR11444 8 492 0.0 T 21-04-2016 IPR000362 Fumarate lyase family SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 Gene3D G3DSA:1.20.200.10 158 420 7.3E-91 T 21-04-2016 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 Gene3D G3DSA:1.10.275.10 19 157 3.2E-57 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 Gene3D G3DSA:1.10.40.30 426 477 6.2E-19 T 21-04-2016 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 21 489 2.3E-276 T 21-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 SDY_4444 06c61206e9e18bea2adf2b39ae300d60 493 PANTHER PTHR11444:SF25 8 492 0.0 T 21-04-2016 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 SUPERFAMILY SSF109755 13 229 1.26E-69 T 21-04-2016 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 PIRSF PIRSF003107 7 226 5.6E-67 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 Gene3D G3DSA:1.20.58.220 127 233 1.9E-31 T 21-04-2016 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.1E-71 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 Gene3D G3DSA:1.20.58.220 9 114 2.0E-36 T 21-04-2016 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 Pfam PF01895 PhoU domain 128 212 1.7E-17 T 21-04-2016 IPR026022 PhoU domain SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 Pfam PF01895 PhoU domain 27 111 6.5E-20 T 21-04-2016 IPR026022 PhoU domain SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 PANTHER PTHR10010 1 224 1.2E-93 T 21-04-2016 SDY_4026 3d3dcd63ee65af0c988b14d340bd2b25 241 PANTHER PTHR10010:SF14 1 224 1.2E-93 T 21-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 PANTHER PTHR33941 3 164 3.3E-55 T 21-04-2016 SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 SMART SM00877 5 81 1.4E-26 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 111 164 3.9E-35 T 21-04-2016 IPR032298 Ethanolamine utilization protein EutK, C-terminal UniPathway: UPA00560 SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 PANTHER PTHR33941:SF3 3 164 3.3E-55 T 21-04-2016 SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 Pfam PF00936 BMC domain 6 81 2.0E-21 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 Gene3D G3DSA:1.10.10.10 110 167 2.6E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 23 42 - T 21-04-2016 IPR020808 Bacterial microcompartments protein, conserved site SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 6.0E-9 T 21-04-2016 SDY_2636 dd3f70aab06a5356b74e1e67cf5bf7c6 168 SUPERFAMILY SSF143414 5 94 1.05E-23 T 21-04-2016 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 Pfam PF07730 Histidine kinase 361 425 5.8E-19 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 Gene3D G3DSA:3.30.565.10 425 558 4.3E-13 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 SUPERFAMILY SSF158472 176 225 3.66E-7 T 21-04-2016 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 6.1E-22 T 21-04-2016 IPR029095 NarX-like, N-terminal SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 SMART SM00387 465 559 8.6E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 8.5E-10 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 PANTHER PTHR24421:SF25 2 286 3.1E-288 T 21-04-2016 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 PANTHER PTHR24421 2 286 3.1E-288 T 21-04-2016 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 PANTHER PTHR24421 356 559 3.1E-288 T 21-04-2016 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 SUPERFAMILY SSF55874 424 555 3.41E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 SMART SM00304 174 227 2.5E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 Pfam PF00672 HAMP domain 156 223 3.0E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_2653 2ab832bd0452dc90c4d490ed98bcbe6f 566 PANTHER PTHR24421:SF25 356 559 3.1E-288 T 21-04-2016 SDY_2873 66d13382ccde5b1cb8e0c11f6634b262 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 2.0E-26 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2873 66d13382ccde5b1cb8e0c11f6634b262 354 PANTHER PTHR30177:SF2 60 344 7.8E-140 T 21-04-2016 SDY_2873 66d13382ccde5b1cb8e0c11f6634b262 354 Gene3D G3DSA:1.10.3720.10 140 325 6.1E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2873 66d13382ccde5b1cb8e0c11f6634b262 354 SUPERFAMILY SSF161098 142 324 2.22E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2873 66d13382ccde5b1cb8e0c11f6634b262 354 PANTHER PTHR30177 60 344 7.8E-140 T 21-04-2016 SDY_3308 a707b0c5da3908506490c474861a7150 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 8.5E-173 T 21-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 SDY_3308 a707b0c5da3908506490c474861a7150 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 4.0E-8 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SDY_3308 a707b0c5da3908506490c474861a7150 443 PANTHER PTHR35334 1 443 0.0 T 21-04-2016 SDY_3308 a707b0c5da3908506490c474861a7150 443 PANTHER PTHR35334:SF1 1 443 0.0 T 21-04-2016 SDY_3308 a707b0c5da3908506490c474861a7150 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 55.757 T 21-04-2016 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.583 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 3.4E-139 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 PANTHER PTHR11835:SF35 1 361 1.3E-205 T 21-04-2016 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 21-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 Gene3D G3DSA:3.40.718.10 1 357 3.9E-130 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 SMART SM01329 6 355 4.7E-199 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 PANTHER PTHR11835 1 361 1.3E-205 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 SUPERFAMILY SSF53659 2 360 9.54E-122 T 21-04-2016 SDY_0100 bb48dc5a7064dc3d28dacba7b07cad55 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 4.9E-172 T 21-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 Gene3D G3DSA:1.10.3720.10 203 332 8.3E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 Gene3D G3DSA:1.10.3720.10 87 162 8.3E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465:SF0 194 337 3.8E-153 T 21-04-2016 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465:SF0 1 169 3.8E-153 T 21-04-2016 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.3E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465 194 337 3.8E-153 T 21-04-2016 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465 1 169 3.8E-153 T 21-04-2016 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 89 160 1.49E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4566 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 200 322 1.49E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3615 9bad97e2643758edef134df2967d5e56 498 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 223 494 1.9E-116 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SDY_3615 9bad97e2643758edef134df2967d5e56 498 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 468 481 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_3615 9bad97e2643758edef134df2967d5e56 498 SMART SM00382 293 484 1.2E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3615 9bad97e2643758edef134df2967d5e56 498 Gene3D G3DSA:1.20.120.140 185 276 5.2E-36 T 21-04-2016 SDY_3615 9bad97e2643758edef134df2967d5e56 498 Gene3D G3DSA:3.40.50.300 288 494 4.3E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3615 9bad97e2643758edef134df2967d5e56 498 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 223 495 66.017 T 21-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SDY_3615 9bad97e2643758edef134df2967d5e56 498 SUPERFAMILY SSF47364 195 274 1.7E-22 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_3615 9bad97e2643758edef134df2967d5e56 498 PANTHER PTHR11564:SF16 190 498 1.7E-156 T 21-04-2016 SDY_3615 9bad97e2643758edef134df2967d5e56 498 Pfam PF02881 SRP54-type protein, helical bundle domain 211 276 1.9E-13 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_3615 9bad97e2643758edef134df2967d5e56 498 Pfam PF00448 SRP54-type protein, GTPase domain 294 494 9.4E-80 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_3615 9bad97e2643758edef134df2967d5e56 498 SUPERFAMILY SSF52540 287 494 1.42E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3615 9bad97e2643758edef134df2967d5e56 498 PANTHER PTHR11564 190 498 1.7E-156 T 21-04-2016 SDY_3615 9bad97e2643758edef134df2967d5e56 498 SMART SM00963 200 280 3.3E-24 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_3615 9bad97e2643758edef134df2967d5e56 498 SMART SM00962 294 495 4.7E-125 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 PANTHER PTHR11695 12 346 1.2E-126 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 Gene3D G3DSA:3.90.180.10 2 164 4.1E-45 T 21-04-2016 IPR011032 GroES-like SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 2.4E-27 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 SMART SM00829 6 344 0.002 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 Gene3D G3DSA:3.40.50.720 165 286 1.1E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 SUPERFAMILY SSF50129 1 170 8.13E-43 T 21-04-2016 IPR011032 GroES-like SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 SUPERFAMILY SSF51735 138 314 3.36E-29 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 Pfam PF00107 Zinc-binding dehydrogenase 172 305 4.5E-21 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_2263 b09219ae960ab0f9d8f275705f9befff 346 PANTHER PTHR11695:SF559 12 346 1.2E-126 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SUPERFAMILY SSF55021 705 761 5.83E-9 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Pfam PF01842 ACT domain 819 874 3.0E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Pfam PF01842 ACT domain 709 758 4.7E-7 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SMART SM00471 464 611 2.5E-12 T 21-04-2016 IPR003607 HD/PDEase domain SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Gene3D G3DSA:3.30.460.10 87 181 4.3E-7 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Pfam PF01966 HD domain 468 601 2.7E-15 T 21-04-2016 IPR006674 HD domain SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Gene3D G3DSA:3.30.70.260 817 867 4.7E-7 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Gene3D G3DSA:3.30.70.260 708 769 4.1E-4 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 PIRSF PIRSF006288 27 889 0.0 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SUPERFAMILY SSF55021 816 874 1.68E-8 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.9E-36 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 884 6.4E-303 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 PANTHER PTHR13734:SF45 109 704 1.8E-165 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Pfam PF01909 Nucleotidyltransferase domain 86 137 9.7E-7 T 21-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Gene3D G3DSA:1.10.3210.10 438 630 1.5E-28 T 21-04-2016 IPR006674 HD domain SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SUPERFAMILY SSF81593 213 328 1.18E-9 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 349.571 T 21-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SUPERFAMILY SSF109604 446 628 2.98E-13 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 PANTHER PTHR13734 109 704 1.8E-165 T 21-04-2016 SDY_0183 53a0856b9d5f24221c55ce627203a17e 890 SUPERFAMILY SSF81301 49 189 2.62E-21 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 SUPERFAMILY SSF50692 612 785 9.49E-41 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 SMART SM00926 27 87 1.8E-9 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 1 785 0.0 T 21-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Pfam PF01568 Molydopterin dinucleotide binding domain 666 777 4.4E-28 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 PANTHER PTHR11615:SF128 323 785 0.0 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 PANTHER PTHR11615:SF128 1 291 0.0 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 27 87 1.0E-17 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Gene3D G3DSA:2.20.25.90 25 91 6.0E-18 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 32 50 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 488 505 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Gene3D G3DSA:3.40.228.10 178 381 9.8E-76 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Pfam PF00384 Molybdopterin oxidoreductase 90 547 3.7E-112 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 PANTHER PTHR11615 323 785 0.0 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 PANTHER PTHR11615 1 291 0.0 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 SUPERFAMILY SSF53706 28 668 5.89E-182 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Gene3D G3DSA:3.40.50.740 382 625 6.1E-80 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Gene3D G3DSA:3.40.50.740 92 177 6.1E-80 T 21-04-2016 SDY_2367 ea654cd404e30f0d08d9ebb58821218c 785 Gene3D G3DSA:2.40.40.20 641 785 9.6E-59 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-10 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 Pfam PF03466 LysR substrate binding domain 87 270 2.5E-13 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 PANTHER PTHR30579 1 272 1.5E-100 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 SUPERFAMILY SSF53850 89 270 4.16E-15 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 Gene3D G3DSA:3.40.190.10 89 177 1.1E-7 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 Gene3D G3DSA:3.40.190.10 211 222 1.1E-7 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 SUPERFAMILY SSF46785 2 85 1.62E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 PANTHER PTHR30579:SF0 1 272 1.5E-100 T 21-04-2016 SDY_3985 062fe530f9514d44e783a6fc760d7fb5 279 Gene3D G3DSA:1.10.10.10 2 82 1.6E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2679 be69e38604d606bbdab513a4709f2058 158 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 28 156 5.6E-49 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH SDY_2679 be69e38604d606bbdab513a4709f2058 158 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 27 157 1.0E-73 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH SDY_0696 9ed734d2db599900373bfc93276f57e3 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 2.3E-102 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 SUPERFAMILY SSF160240 227 292 1.05E-9 T 21-04-2016 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 PANTHER PTHR11562 3 301 3.6E-119 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 Pfam PF01545 Cation efflux family 22 213 1.1E-51 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 Gene3D G3DSA:3.30.70.1350 227 290 7.8E-4 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SDY_0696 9ed734d2db599900373bfc93276f57e3 313 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 66.892 T 21-04-2016 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 SUPERFAMILY SSF161111 16 214 9.55E-61 T 21-04-2016 SDY_0696 9ed734d2db599900373bfc93276f57e3 313 Gene3D G3DSA:1.20.1510.10 18 213 1.3E-67 T 21-04-2016 IPR027469 Cation efflux protein transmembrane domain SDY_0696 9ed734d2db599900373bfc93276f57e3 313 PANTHER PTHR11562:SF17 3 301 3.6E-119 T 21-04-2016 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF52540 779 987 5.78E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.779 T 21-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF52540 351 463 1.27E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF52540 520 780 5.6E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Gene3D G3DSA:3.30.2060.10 130 207 1.8E-13 T 21-04-2016 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 PANTHER PTHR14025:SF21 383 1145 0.0 T 21-04-2016 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SMART SM00982 1005 1105 1.9E-49 T 21-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 PANTHER PTHR14025 383 1145 0.0 T 21-04-2016 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Gene3D G3DSA:3.40.50.300 795 960 9.8E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF141259 467 545 6.67E-23 T 21-04-2016 IPR003711 CarD-like/TRCF domain SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF143517 992 1144 1.7E-44 T 21-04-2016 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SMART SM01058 476 573 4.8E-49 T 21-04-2016 IPR003711 CarD-like/TRCF domain SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 21-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.7E-18 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SUPERFAMILY SSF52540 10 343 7.21E-100 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Gene3D G3DSA:3.40.50.300 586 783 1.7E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.1E-20 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 5.4E-24 T 21-04-2016 IPR003711 CarD-like/TRCF domain SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SMART SM00487 597 787 3.4E-36 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 Pfam PF03461 TRCF domain 1006 1098 2.4E-28 T 21-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SDY_2036 421bf888f385bc06e693ccdc04c784d9 1148 SMART SM00490 823 907 1.6E-19 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0075 10af8e029d2976e91ee59bcb09e86b15 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 1.9E-33 T 21-04-2016 IPR007474 ApaG domain SDY_0075 10af8e029d2976e91ee59bcb09e86b15 125 Gene3D G3DSA:2.60.40.1470 6 125 4.6E-46 T 21-04-2016 IPR007474 ApaG domain SDY_0075 10af8e029d2976e91ee59bcb09e86b15 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.655 T 21-04-2016 IPR023065 Uncharacterised protein family ApaG SDY_0075 10af8e029d2976e91ee59bcb09e86b15 125 PANTHER PTHR14289 5 122 1.1E-60 T 21-04-2016 SDY_0075 10af8e029d2976e91ee59bcb09e86b15 125 SUPERFAMILY SSF110069 5 125 2.09E-48 T 21-04-2016 IPR007474 ApaG domain SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PANTHER PTHR30302 1 164 2.4E-68 T 21-04-2016 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 Pfam PF01750 Hydrogenase maturation protease 20 147 9.8E-37 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 Gene3D G3DSA:3.40.50.1450 1 158 4.8E-53 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PANTHER PTHR30302:SF1 1 164 2.4E-68 T 21-04-2016 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 1.1E-54 T 21-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 6.7E-23 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 6.7E-23 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 6.7E-23 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 6.7E-23 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 6.7E-23 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 1.1E-45 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_3080 eb7639649ad9d8b0e8946740ea4ae01b 164 SUPERFAMILY SSF53163 1 159 1.96E-46 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_0173 a06bb3d27ac8c21e64bfaea58fb7d35e 207 PANTHER PTHR30506 1 207 4.5E-98 T 21-04-2016 SDY_0173 a06bb3d27ac8c21e64bfaea58fb7d35e 207 PANTHER PTHR30506:SF3 1 207 4.5E-98 T 21-04-2016 SDY_0173 a06bb3d27ac8c21e64bfaea58fb7d35e 207 Pfam PF03458 UPF0126 domain 92 163 3.9E-18 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 SDY_0173 a06bb3d27ac8c21e64bfaea58fb7d35e 207 Pfam PF03458 UPF0126 domain 4 78 4.3E-23 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 SDY_0446 266ecd87190fe998d0189275870c3158 624 PANTHER PTHR11528 5 623 0.0 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SDY_0446 266ecd87190fe998d0189275870c3158 624 PIRSF PIRSF002583 1 624 3.0E-219 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SDY_0446 266ecd87190fe998d0189275870c3158 624 PANTHER PTHR11528:SF44 5 623 0.0 T 21-04-2016 SDY_0446 266ecd87190fe998d0189275870c3158 624 SMART SM00387 27 184 6.0E-13 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0446 266ecd87190fe998d0189275870c3158 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 21-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 SDY_0446 266ecd87190fe998d0189275870c3158 624 Gene3D G3DSA:3.30.565.10 5 238 2.9E-84 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0446 266ecd87190fe998d0189275870c3158 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.1 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SDY_0446 266ecd87190fe998d0189275870c3158 624 SUPERFAMILY SSF110942 510 623 1.7E-34 T 21-04-2016 SDY_0446 266ecd87190fe998d0189275870c3158 624 Pfam PF00183 Hsp90 protein 214 622 2.1E-123 T 21-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SDY_0446 266ecd87190fe998d0189275870c3158 624 SUPERFAMILY SSF54211 230 485 9.86E-103 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_0446 266ecd87190fe998d0189275870c3158 624 SUPERFAMILY SSF55874 4 210 1.7E-67 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.3E-64 T 21-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SDY_0446 266ecd87190fe998d0189275870c3158 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.3E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 8.5E-20 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 SUPERFAMILY SSF52540 17 198 3.42E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 PANTHER PTHR11649 2 206 4.5E-59 T 21-04-2016 SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 Gene3D G3DSA:3.40.50.300 6 198 1.8E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.758 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SDY_3878 3480cd573d47a9957acf9fa3fe3f7b3c 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 7.1E-76 T 21-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 Pfam PF01047 MarR family 29 87 1.3E-18 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PANTHER PTHR33164 9 141 8.1E-27 T 21-04-2016 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 46.12 T 21-04-2016 IPR023071 Transcriptional regulator, SlyA SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.3E-28 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.3E-28 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.3E-28 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.3E-28 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 PANTHER PTHR33164:SF16 9 141 8.1E-27 T 21-04-2016 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 21-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 SMART SM00347 22 123 4.0E-32 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 Gene3D G3DSA:1.10.10.10 3 137 3.0E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1865 e5515a1baee1dd14ef6d2b4f35b2c1b0 144 SUPERFAMILY SSF46785 4 139 1.43E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1725 673d5929fb0bc0b8f918ae2b8d7718e2 172 Gene3D G3DSA:3.40.630.30 1 166 1.4E-42 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1725 673d5929fb0bc0b8f918ae2b8d7718e2 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.3E-18 T 21-04-2016 SDY_1725 673d5929fb0bc0b8f918ae2b8d7718e2 172 SUPERFAMILY SSF55729 3 165 2.4E-35 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1725 673d5929fb0bc0b8f918ae2b8d7718e2 172 PANTHER PTHR23091 1 168 6.1E-97 T 21-04-2016 SDY_1725 673d5929fb0bc0b8f918ae2b8d7718e2 172 PANTHER PTHR23091:SF187 1 168 6.1E-97 T 21-04-2016 SDY_3729 34b767cf45470d638df251396a2f31a6 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 6.8E-137 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3729 34b767cf45470d638df251396a2f31a6 354 Gene3D G3DSA:3.20.20.210 2 352 1.5E-157 T 21-04-2016 SDY_3729 34b767cf45470d638df251396a2f31a6 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3729 34b767cf45470d638df251396a2f31a6 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.623 T 21-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3729 34b767cf45470d638df251396a2f31a6 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3729 34b767cf45470d638df251396a2f31a6 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.1E-142 T 21-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3729 34b767cf45470d638df251396a2f31a6 354 PANTHER PTHR21091 1 351 3.8E-165 T 21-04-2016 SDY_3729 34b767cf45470d638df251396a2f31a6 354 SUPERFAMILY SSF51726 1 352 1.83E-122 T 21-04-2016 SDY_3729 34b767cf45470d638df251396a2f31a6 354 PANTHER PTHR21091:SF2 1 351 3.8E-165 T 21-04-2016 SDY_1636 a3f880ac2d6e19d13ec9acc28d9d3d27 163 PANTHER PTHR11785 1 157 1.7E-109 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1636 a3f880ac2d6e19d13ec9acc28d9d3d27 163 PANTHER PTHR11785:SF55 1 157 1.7E-109 T 21-04-2016 SDY_1636 a3f880ac2d6e19d13ec9acc28d9d3d27 163 Pfam PF13520 Amino acid permease 5 118 7.9E-9 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0322 2b779024f3a834546f99334abe4c506a 179 Gene3D G3DSA:2.60.40.1620 43 177 5.0E-68 T 21-04-2016 IPR021658 Domain of unknown function DUF3251 SDY_0322 2b779024f3a834546f99334abe4c506a 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 176 1.7E-77 T 21-04-2016 IPR021658 Domain of unknown function DUF3251 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 369 518 3.8E-40 T 21-04-2016 IPR027413 GroEL-like equatorial domain SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 3 188 1.4E-47 T 21-04-2016 IPR027413 GroEL-like equatorial domain SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF52029 185 376 3.14E-83 T 21-04-2016 IPR027409 GroEL-like apical domain SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 21-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:3.50.7.10 189 368 6.0E-99 T 21-04-2016 IPR027409 GroEL-like apical domain SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.2E-257 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 406 521 5.88E-78 T 21-04-2016 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 7 134 5.88E-78 T 21-04-2016 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.2E-94 T 21-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 21-04-2016 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PANTHER PTHR11353 2 548 8.3E-257 T 21-04-2016 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.614 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_4449 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 21-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 SUPERFAMILY SSF55124 346 422 1.8E-21 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.662 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 PANTHER PTHR11493 1 559 7.5E-278 T 21-04-2016 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 SUPERFAMILY SSF56014 150 344 1.57E-61 T 21-04-2016 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Gene3D G3DSA:3.90.480.10 342 422 1.2E-62 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Gene3D G3DSA:3.90.480.10 74 146 1.2E-62 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 SUPERFAMILY SSF55124 13 142 9.16E-26 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 1.8E-302 T 21-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 21-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 PANTHER PTHR11493:SF47 1 559 7.5E-278 T 21-04-2016 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Gene3D G3DSA:3.30.413.10 430 557 7.3E-35 T 21-04-2016 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Gene3D G3DSA:3.30.413.10 150 340 4.0E-73 T 21-04-2016 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 550 0.073 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 9.6E-48 T 21-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 417 9.9E-15 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.5E-12 T 21-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2965 d3809044d2d99ba85b175ba99d9e76ee 570 SUPERFAMILY SSF56014 428 559 6.28E-35 T 21-04-2016 SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 PANTHER PTHR10804:SF110 83 300 6.0E-76 T 21-04-2016 SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 Gene3D G3DSA:3.90.230.10 84 298 5.3E-76 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 SUPERFAMILY SSF53092 7 68 1.74E-8 T 21-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 PANTHER PTHR10804 83 300 6.0E-76 T 21-04-2016 SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 Pfam PF00557 Metallopeptidase family M24 84 285 2.3E-62 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 79 1.5E-6 T 21-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 265 4.4E-5 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 PRINTS PR00599 Methionine aminopeptidase-1 signature 150 166 4.4E-5 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 Gene3D G3DSA:3.40.350.10 4 73 9.8E-10 T 21-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SDY_2584 8a743390dc9d5c73bc6e6e7ae5435f02 304 SUPERFAMILY SSF55920 84 299 2.88E-70 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Gene3D G3DSA:1.10.10.60 255 306 5.4E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 SUPERFAMILY SSF53098 65 229 2.43E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 SUPERFAMILY SSF46689 306 358 3.58E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Gene3D G3DSA:1.10.10.60 307 357 7.4E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 SMART SM00342 270 353 1.2E-27 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Pfam PF13276 HTH-like domain 5 47 1.4E-8 T 21-04-2016 IPR025948 HTH-like domain SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Pfam PF00665 Integrase core domain 72 186 1.2E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Gene3D G3DSA:3.30.420.10 66 226 1.2E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 PANTHER PTHR11019 254 361 1.3E-73 T 21-04-2016 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 Pfam PF12833 Helix-turn-helix domain 276 355 2.5E-18 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 PANTHER PTHR11019:SF127 254 361 1.3E-73 T 21-04-2016 SDY_1784 86327935bed92d5ad5fd6dd2c47e503d 377 SUPERFAMILY SSF46689 255 304 7.17E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3290 486f6b4a87a29fb45e57c580e78a1821 130 Pfam PF07681 DoxX 9 87 1.4E-16 T 21-04-2016 IPR032808 DoxX family SDY_3290 486f6b4a87a29fb45e57c580e78a1821 130 PANTHER PTHR33452 1 130 2.6E-95 T 21-04-2016 SDY_3290 486f6b4a87a29fb45e57c580e78a1821 130 PANTHER PTHR33452:SF8 1 130 2.6E-95 T 21-04-2016 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 SMART SM00421 151 208 3.4E-24 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 SUPERFAMILY SSF52172 7 137 2.7E-34 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 Gene3D G3DSA:1.10.10.10 155 211 4.9E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 PANTHER PTHR26402 7 213 2.9E-105 T 21-04-2016 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.3E-24 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 Gene3D G3DSA:3.40.50.2300 6 154 2.4E-38 T 21-04-2016 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 SUPERFAMILY SSF46894 137 210 7.48E-22 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 PANTHER PTHR26402:SF458 7 213 2.9E-105 T 21-04-2016 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 Pfam PF00072 Response regulator receiver domain 9 121 5.2E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0885 157a1dffc1c88c9cf3998d3a1bc58475 215 SMART SM00448 7 120 1.6E-33 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 SMART SM00411 1 90 7.6E-43 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.2E-33 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-36 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.0E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.0E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.0E-20 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 SUPERFAMILY SSF47729 1 90 4.27E-32 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_0292 f6fe331eede1004b86965d42acd8bb28 90 PANTHER PTHR33175 1 90 1.6E-44 T 21-04-2016 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 PANTHER PTHR13326 1 340 1.4E-93 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 21-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.834 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 3.4E-40 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 1.5E-18 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 SUPERFAMILY SSF55120 2 340 1.44E-101 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2944 4b9f3bb3d9f4586d2755111c99bafecc 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 7.0E-107 T 21-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3420 43bd7d928291e434b0d8218648b9d18f 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 2.0E-63 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3420 43bd7d928291e434b0d8218648b9d18f 481 PIRSF PIRSF004919 14 481 5.2E-158 T 21-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3420 43bd7d928291e434b0d8218648b9d18f 481 SUPERFAMILY SSF111283 22 480 2.75E-132 T 21-04-2016 SDY_3420 43bd7d928291e434b0d8218648b9d18f 481 PANTHER PTHR30624 9 481 1.5E-264 T 21-04-2016 SDY_3420 43bd7d928291e434b0d8218648b9d18f 481 PANTHER PTHR30624:SF4 9 481 1.5E-264 T 21-04-2016 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 SUPERFAMILY SSF47598 1 35 4.45E-14 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 Pfam PF03925 SeqA protein C-terminal domain 71 179 3.2E-49 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 46.383 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 SUPERFAMILY SSF82808 65 181 4.05E-49 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 Gene3D G3DSA:1.10.1220.10 1 40 5.6E-27 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 PIRSF PIRSF019401 1 181 1.3E-50 T 21-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 SDY_0627 51700f27c9e8def73a4899e0f4ef57c7 181 Gene3D G3DSA:1.20.1380.10 68 181 1.1E-54 T 21-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.8.60 187 258 7.3E-33 T 21-04-2016 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:3.40.50.300 23 178 2.9E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.752 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF52540 23 255 1.06E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.8E-147 T 21-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 PANTHER PTHR13779 1 336 3.1E-190 T 21-04-2016 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 PANTHER PTHR13779:SF25 1 336 3.1E-190 T 21-04-2016 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 1.9E-115 T 21-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 4.3E-33 T 21-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.10.10 260 330 1.4E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 SMART SM00382 54 181 1.3E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1147 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF46785 260 333 3.59E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 SMART SM00829 12 338 2.0E-5 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 PANTHER PTHR11695:SF285 13 341 1.5E-160 T 21-04-2016 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 SUPERFAMILY SSF50129 1 173 1.02E-53 T 21-04-2016 IPR011032 GroES-like SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 Gene3D G3DSA:3.40.50.720 173 287 1.4E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.4E-190 T 21-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.947 T 21-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 PANTHER PTHR11695 13 341 1.5E-160 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.2E-31 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 SUPERFAMILY SSF51735 141 305 1.71E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.4E-26 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_4049 dfb4b3d6df42805a4855bd01c899fb23 341 Gene3D G3DSA:3.90.180.10 1 172 1.0E-50 T 21-04-2016 IPR011032 GroES-like SDY_0596 bf23401583b410850baf2635b1fd0b12 359 Gene3D G3DSA:3.40.50.300 131 334 1.3E-89 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0596 bf23401583b410850baf2635b1fd0b12 359 PANTHER PTHR30473 5 357 7.7E-214 T 21-04-2016 SDY_0596 bf23401583b410850baf2635b1fd0b12 359 PANTHER PTHR30473:SF1 5 357 7.7E-214 T 21-04-2016 SDY_0596 bf23401583b410850baf2635b1fd0b12 359 SUPERFAMILY SSF52540 130 331 2.67E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0596 bf23401583b410850baf2635b1fd0b12 359 Pfam PF02562 PhoH-like protein 131 334 9.1E-96 T 21-04-2016 IPR003714 PhoH-like protein GO:0005524 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:1.10.8.60 316 413 2.1E-38 T 21-04-2016 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 21-04-2016 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF52540 64 403 1.78E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.3E-49 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 PANTHER PTHR11262 10 413 1.7E-257 T 21-04-2016 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 3.7E-217 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 SMART SM00994 12 51 1.0E-24 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.718 T 21-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 SMART SM01086 317 412 4.8E-36 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 1.7E-17 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_0294 a012cfd0e4de441348271c672b888a8a 424 SMART SM00382 111 333 1.3E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 21-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 294 311 6.5E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0294 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 66 253 6.5E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 PANTHER PTHR30368 13 338 5.3E-258 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 332 2.4E-183 T 21-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 5.6E-40 T 21-04-2016 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 Gene3D G3DSA:3.40.190.10 26 170 4.2E-44 T 21-04-2016 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 Gene3D G3DSA:3.40.190.10 177 301 1.1E-27 T 21-04-2016 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 PANTHER PTHR30368:SF1 13 338 5.3E-258 T 21-04-2016 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 21-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 21-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 SDY_2621 a606e8cd4fb86d5b3e2e3554a690d0b4 338 SUPERFAMILY SSF53850 24 332 1.77E-80 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF81653 236 333 2.62E-21 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PANTHER PTHR24093:SF126 20 704 2.2E-263 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 3.9E-78 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 639 6.6E-35 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 1.6E-163 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Gene3D G3DSA:3.40.1110.10 453 554 2.5E-20 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Gene3D G3DSA:3.40.50.1000 555 695 1.0E-37 T 21-04-2016 IPR023214 HAD-like domain SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF55008 49 111 3.01E-16 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 21-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Gene3D G3DSA:3.40.1110.10 424 452 8.2E-5 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Gene3D G3DSA:3.30.70.100 49 112 3.6E-20 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 4.3E-28 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Pfam PF00122 E1-E2 ATPase 204 425 1.8E-59 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF81665 675 714 2.62E-18 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF81665 334 428 2.62E-18 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF81665 186 237 2.62E-18 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Pfam PF00403 Heavy-metal-associated domain 53 109 8.3E-12 T 21-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PANTHER PTHR24093 20 704 2.2E-263 T 21-04-2016 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 1.4E-179 T 21-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF56784 491 726 2.97E-51 T 21-04-2016 IPR023214 HAD-like domain SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 SUPERFAMILY SSF56784 433 452 2.97E-51 T 21-04-2016 IPR023214 HAD-like domain SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 Gene3D G3DSA:2.70.150.10 186 334 8.6E-25 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 1.4E-5 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 1.4E-5 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_3620 6a398e413a8d0b06ef28857c050c1641 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 1.4E-5 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 PIRSF PIRSF005461 1 209 6.1E-82 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.524 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 Gene3D G3DSA:3.40.50.150 1 208 7.5E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 PANTHER PTHR10920 1 209 1.8E-143 T 21-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 2.3E-57 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 SUPERFAMILY SSF53335 31 208 5.01E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 PANTHER PTHR10920:SF20 1 209 1.8E-143 T 21-04-2016 SDY_3360 d5fcfe6e9fe01215a41a0ba0f3d9115b 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.9E-96 T 21-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 SDY_4077 848afda318e002d4fa04726eabcb67f1 223 PANTHER PTHR30506:SF2 15 223 2.9E-137 T 21-04-2016 SDY_4077 848afda318e002d4fa04726eabcb67f1 223 Pfam PF03458 UPF0126 domain 23 97 1.9E-18 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 SDY_4077 848afda318e002d4fa04726eabcb67f1 223 Pfam PF03458 UPF0126 domain 109 182 8.6E-22 T 21-04-2016 IPR005115 Uncharacterised domain UPF0126 SDY_4077 848afda318e002d4fa04726eabcb67f1 223 PANTHER PTHR30506 15 223 2.9E-137 T 21-04-2016 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 21-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 PANTHER PTHR11780 5 425 8.0E-224 T 21-04-2016 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 SUPERFAMILY SSF140490 333 429 4.84E-32 T 21-04-2016 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.8E-26 T 21-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 21-04-2016 IPR019554 Soluble ligand binding domain SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 SMART SM00928 336 381 4.3E-22 T 21-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 SUPERFAMILY SSF142019 16 246 1.83E-85 T 21-04-2016 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 21-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 21-04-2016 SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.3E-49 T 21-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SDY_2480 8e3a7a12de0eea1970dd81e9f4ab2ff7 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 6.5E-205 T 21-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 4.2E-16 T 21-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 Gene3D G3DSA:3.30.360.10 146 336 1.2E-27 T 21-04-2016 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 1.5E-27 T 21-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 PANTHER PTHR22604 1 336 6.0E-224 T 21-04-2016 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 PANTHER PTHR22604:SF116 1 336 6.0E-224 T 21-04-2016 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 SUPERFAMILY SSF55347 130 271 1.46E-20 T 21-04-2016 SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 Gene3D G3DSA:3.40.50.720 3 145 1.6E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3591 6d3bc5c06bfbb4336b1b1196e85d8787 345 SUPERFAMILY SSF51735 3 158 4.93E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4591a 6f441e610d8c9fa18f088a1c84357af5 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 4.2E-51 T 21-04-2016 IPR009320 YagB/YeeU/YfjZ SDY_4591a 6f441e610d8c9fa18f088a1c84357af5 122 SUPERFAMILY SSF143737 7 118 1.44E-55 T 21-04-2016 SDY_4591a 6f441e610d8c9fa18f088a1c84357af5 122 Gene3D G3DSA:3.30.450.20 27 120 6.0E-58 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 Gene3D G3DSA:1.10.260.40 4 64 3.8E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.3E-32 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 SMART SM00354 3 73 2.3E-34 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 Gene3D G3DSA:3.40.50.2300 65 176 4.9E-42 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 Gene3D G3DSA:3.40.50.2300 177 311 3.3E-45 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 PANTHER PTHR30146:SF34 2 357 1.7E-186 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 SUPERFAMILY SSF47413 2 61 2.04E-18 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 3.3E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 3.3E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 SUPERFAMILY SSF53822 61 326 5.69E-55 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 PANTHER PTHR30146 2 357 1.7E-186 T 21-04-2016 SDY_0379 7556a41cfb625c6f552c8ccd92f393ad 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.8E-22 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2842 62f9cc5ec68bc6a1a09460c7ec676cbe 276 Pfam PF00665 Integrase core domain 72 186 2.9E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2842 62f9cc5ec68bc6a1a09460c7ec676cbe 276 Pfam PF13276 HTH-like domain 5 47 4.8E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_2842 62f9cc5ec68bc6a1a09460c7ec676cbe 276 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_2842 62f9cc5ec68bc6a1a09460c7ec676cbe 276 Gene3D G3DSA:3.30.420.10 66 226 1.4E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2842 62f9cc5ec68bc6a1a09460c7ec676cbe 276 SUPERFAMILY SSF53098 65 229 1.97E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 93 136 1.02E-12 T 21-04-2016 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:1.10.287.1050 1 58 4.4E-32 T 21-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 PANTHER PTHR38097:SF1 2 137 1.1E-109 T 21-04-2016 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 PIRSF PIRSF002096 1 135 4.2E-58 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:4.10.430.10 91 136 6.3E-27 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 Pfam PF00816 H-NS histone family 32 127 1.4E-20 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 SMART SM00528 87 135 1.0E-26 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 PANTHER PTHR38097 2 137 1.1E-109 T 21-04-2016 SDY_1289 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 21-04-2016 SDY_0796 71a004242fcd228f7df5e22728baad96 88 PANTHER PTHR38777:SF1 2 88 3.0E-35 T 21-04-2016 SDY_0796 71a004242fcd228f7df5e22728baad96 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 21-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SDY_0796 71a004242fcd228f7df5e22728baad96 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 1.7E-12 T 21-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SDY_0796 71a004242fcd228f7df5e22728baad96 88 PANTHER PTHR38777 2 88 3.0E-35 T 21-04-2016 SDY_0796 71a004242fcd228f7df5e22728baad96 88 SUPERFAMILY SSF57716 39 72 2.71E-8 T 21-04-2016 SDY_0796 71a004242fcd228f7df5e22728baad96 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 9.4E-18 T 21-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type SDY_0796 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 1.5E-6 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SDY_0796 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 1.5E-6 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-24 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-24 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-24 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-24 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 Gene3D G3DSA:1.10.10.10 16 167 8.1E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PANTHER PTHR18964:SF141 44 175 1.4E-60 T 21-04-2016 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 SUPERFAMILY SSF46785 22 166 3.42E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 PANTHER PTHR18964 44 175 1.4E-60 T 21-04-2016 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 SMART SM00347 46 148 3.0E-31 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 21-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SDY_2879 d958565851eb6d8e670e9e1eb5fcc3b7 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 PANTHER PTHR26402 2 194 6.7E-159 T 21-04-2016 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 Gene3D G3DSA:1.10.10.10 142 192 1.9E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 Gene3D G3DSA:3.40.50.2300 1 141 1.5E-30 T 21-04-2016 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 190 2.4E-23 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 SUPERFAMILY SSF52172 1 125 2.28E-26 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 SUPERFAMILY SSF46894 130 193 4.08E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 SMART SM00421 135 192 1.7E-25 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.8E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.8E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.8E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 SMART SM00448 2 112 4.5E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 PANTHER PTHR26402:SF500 2 194 6.7E-159 T 21-04-2016 SDY_4150 d39a4564adaa696572b6be7c1d92da03 196 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 1.7E-4 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.37 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 PANTHER PTHR24220 7 411 4.1E-218 T 21-04-2016 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Pfam PF00005 ABC transporter 302 454 2.0E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Pfam PF00005 ABC transporter 26 184 3.1E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 SUPERFAMILY SSF52540 276 525 5.54E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 PANTHER PTHR24220:SF574 7 411 4.1E-218 T 21-04-2016 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Gene3D G3DSA:3.40.50.300 275 526 1.8E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 Gene3D G3DSA:3.40.50.300 4 258 1.2E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 SUPERFAMILY SSF52540 5 256 1.3E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 SMART SM00382 34 306 3.2E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0899 454fe978ad15a3c70900b13ae94f4c0a 529 SMART SM00382 311 502 1.4E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 Gene3D G3DSA:2.40.30.10 282 363 1.2E-33 T 21-04-2016 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 PANTHER PTHR11933:SF10 3 365 3.2E-220 T 21-04-2016 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 SUPERFAMILY SSF52402 5 295 1.04E-57 T 21-04-2016 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 PANTHER PTHR11933 3 365 3.2E-220 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 41.043 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 Gene3D G3DSA:2.30.30.280 213 280 3.9E-35 T 21-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 4.5E-161 T 21-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 Gene3D G3DSA:3.40.50.620 3 211 4.0E-98 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2019 9fb24457896ba63d722f4fe4daefddc6 368 Pfam PF03054 tRNA methyl transferase 6 360 6.8E-145 T 21-04-2016 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 PANTHER PTHR30347 1 1103 0.0 T 21-04-2016 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 SUPERFAMILY SSF82689 985 1083 3.4E-16 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 31 256 2.7E-54 T 21-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 Gene3D G3DSA:2.30.30.60 933 982 1.3E-16 T 21-04-2016 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 Pfam PF00924 Mechanosensitive ion channel 875 1074 8.8E-54 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 PANTHER PTHR30347:SF0 1 1103 0.0 T 21-04-2016 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 Gene3D G3DSA:3.30.70.100 989 1072 6.6E-8 T 21-04-2016 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 SUPERFAMILY SSF50182 918 983 7.52E-17 T 21-04-2016 IPR010920 LSM domain SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 7.0E-117 T 21-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 SDY_4433 20ff6b0bf0798d07887b9763d269e202 1107 SUPERFAMILY SSF82861 834 916 1.7E-8 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SDY_4675 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293 1 89 3.0E-19 T 21-04-2016 SDY_4675 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293:SF2 1 89 3.0E-19 T 21-04-2016 SDY_4675 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF12759 InsA C-terminal domain 42 87 1.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4675 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4748 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293 1 89 3.0E-19 T 21-04-2016 SDY_4748 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293:SF2 1 89 3.0E-19 T 21-04-2016 SDY_4748 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF12759 InsA C-terminal domain 42 87 1.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4748 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4666 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293 1 89 3.0E-19 T 21-04-2016 SDY_4666 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293:SF2 1 89 3.0E-19 T 21-04-2016 SDY_4666 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF12759 InsA C-terminal domain 42 87 1.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4666 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4746 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293 1 89 3.0E-19 T 21-04-2016 SDY_4746 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293:SF2 1 89 3.0E-19 T 21-04-2016 SDY_4746 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF12759 InsA C-terminal domain 42 87 1.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4746 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4794 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293 1 89 3.0E-19 T 21-04-2016 SDY_4794 db5c7cbf52b627051ea67af60b45fe2c 90 PANTHER PTHR33293:SF2 1 89 3.0E-19 T 21-04-2016 SDY_4794 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF12759 InsA C-terminal domain 42 87 1.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4794 db5c7cbf52b627051ea67af60b45fe2c 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 PANTHER PTHR34699:SF3 1 170 2.6E-106 T 21-04-2016 SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 170 29.736 T 21-04-2016 IPR002786 Non-canonical purine NTP phosphatase SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 1.3E-71 T 21-04-2016 IPR002786 Non-canonical purine NTP phosphatase SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 PANTHER PTHR34699 1 170 2.6E-106 T 21-04-2016 SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 SUPERFAMILY SSF52972 1 167 8.28E-58 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 Pfam PF01931 Protein of unknown function DUF84 7 166 6.0E-53 T 21-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 SDY_4655 5c03d686a3ad34e5cedcb1f94224455e 170 Gene3D G3DSA:3.90.950.10 2 168 3.7E-63 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 78 127 4.2 T 21-04-2016 IPR000644 CBS domain SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 141 189 1.6 T 21-04-2016 IPR000644 CBS domain SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.30.465.10 197 283 4.7E-31 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 PANTHER PTHR22777:SF17 18 292 3.2E-130 T 21-04-2016 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 141 189 5.8E-5 T 21-04-2016 IPR000644 CBS domain SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 69 124 6.1E-8 T 21-04-2016 IPR000644 CBS domain SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM01091 205 283 1.1E-31 T 21-04-2016 IPR005170 Transporter-associated domain SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 PANTHER PTHR22777 18 292 3.2E-130 T 21-04-2016 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.10.580.10 55 196 1.1E-22 T 21-04-2016 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF56176 204 289 2.73E-24 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF54631 66 202 4.67E-32 T 21-04-2016 SDY_0594 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF03471 Transporter associated domain 206 281 2.1E-23 T 21-04-2016 IPR005170 Transporter-associated domain SDY_1488 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.30.360.10 159 314 1.4E-87 T 21-04-2016 SDY_1488 adec9c8c296a076912033969d932bc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.7E-59 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.6E-48 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.6E-48 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.6E-48 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.6E-48 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.6E-48 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.1E-72 T 21-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF55347 149 312 2.43E-82 T 21-04-2016 SDY_1488 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF51735 3 166 1.04E-66 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1488 adec9c8c296a076912033969d932bc85 331 PIRSF PIRSF000149 1 331 7.9E-137 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 SMART SM00846 3 150 4.8E-95 T 21-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.8E-134 T 21-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SDY_1488 adec9c8c296a076912033969d932bc85 331 PANTHER PTHR10836 1 331 1.2E-249 T 21-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SDY_1488 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.40.50.720 1 158 5.1E-78 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1488 adec9c8c296a076912033969d932bc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 21-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 Gene3D G3DSA:3.30.1360.60 390 466 6.3E-25 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 PANTHER PTHR30009:SF4 4 477 1.6E-253 T 21-04-2016 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 7.0E-27 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 PANTHER PTHR30009 4 477 1.6E-253 T 21-04-2016 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 SUPERFAMILY SSF55604 392 465 5.89E-18 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 SUPERFAMILY SSF51261 497 646 2.44E-50 T 21-04-2016 IPR011055 Duplicated hybrid motif SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 500 624 1.5E-46 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 501 621 1.8E-47 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 8.9E-215 T 21-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 Pfam PF00367 phosphotransferase system, EIIB 396 427 4.1E-12 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 Pfam PF02378 Phosphotransferase system, EIIC 12 300 1.2E-74 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 563 575 - T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 Gene3D G3DSA:2.70.70.10 499 643 8.5E-56 T 21-04-2016 SDY_0613 38deb9da66fe7a52f4d889a617b25ff5 648 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 PANTHER PTHR23115 367 717 4.1E-213 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 PANTHER PTHR23115 742 889 4.1E-213 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 PANTHER PTHR23115:SF184 367 717 4.1E-213 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 PANTHER PTHR23115:SF184 742 889 4.1E-213 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 SUPERFAMILY SSF50447 791 887 3.73E-34 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Gene3D G3DSA:3.40.50.300 389 549 6.4E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Gene3D G3DSA:2.40.30.10 791 887 3.4E-39 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 SUPERFAMILY SSF50447 563 644 7.9E-23 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Gene3D G3DSA:3.40.50.10050 690 768 4.1E-24 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Pfam PF11987 Translation-initiation factor 2 674 779 3.1E-36 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 393 548 4.8E-33 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Gene3D G3DSA:2.40.30.10 563 653 5.7E-21 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 889 4.5E-298 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 SUPERFAMILY SSF46955 3 50 9.89E-12 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Gene3D G3DSA:3.30.56.50 2 50 9.8E-23 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 SUPERFAMILY SSF52540 389 557 4.21E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 6.9E-15 T 21-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 2.5E-7 T 21-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 887 17.631 T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Pfam PF00009 Elongation factor Tu GTP binding domain 394 550 3.4E-35 T 21-04-2016 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 SUPERFAMILY SSF52156 667 796 3.53E-37 T 21-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 56 94 5.7E-16 T 21-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial SDY_3347 8c167e3e07cf9b5ec11697469bac1e48 890 ProSitePatterns PS01176 Initiation factor 2 signature. 840 862 - T 21-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 PANTHER PTHR33799:SF3 3 323 2.4E-239 T 21-04-2016 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 Gene3D G3DSA:3.40.50.510 3 133 4.6E-49 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 6.5E-52 T 21-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 3.2E-55 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 8.2E-57 T 21-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 PANTHER PTHR33799 3 323 2.4E-239 T 21-04-2016 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 SUPERFAMILY SSF53062 3 128 2.35E-37 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 Pfam PF03610 PTS system fructose IIA component 5 116 4.3E-35 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 Gene3D G3DSA:3.40.35.10 162 322 1.8E-67 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_1963 19500d14f9809b752c7f62a187f5aac4 323 SUPERFAMILY SSF52728 162 321 1.11E-54 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 PANTHER PTHR16254 14 404 1.1E-87 T 21-04-2016 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 Pfam PF07885 Ion channel 149 221 2.8E-15 T 21-04-2016 IPR013099 Potassium channel domain SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 Pfam PF02254 TrkA-N domain 246 365 7.2E-20 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 SUPERFAMILY SSF51735 242 384 8.18E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 Gene3D G3DSA:3.40.50.720 242 384 8.3E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 SUPERFAMILY SSF81324 166 260 1.96E-18 T 21-04-2016 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 SUPERFAMILY SSF81324 79 119 1.96E-18 T 21-04-2016 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 PANTHER PTHR16254:SF27 14 404 1.1E-87 T 21-04-2016 SDY_1308 1b3164a6d7d2b1a8315d2c3d1e4c18fe 417 Gene3D G3DSA:1.10.287.70 141 221 3.7E-15 T 21-04-2016 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 PANTHER PTHR12992 8 192 6.8E-58 T 21-04-2016 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 SUPERFAMILY SSF55811 8 181 4.87E-35 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 49.972 T 21-04-2016 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 Pfam PF00293 NUDIX domain 30 143 9.3E-15 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 Gene3D G3DSA:3.90.79.10 25 185 7.2E-40 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1719 f97d034ad242225fd981caebaf749e6a 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 21-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 SDY_0078 af6154adb800296037af3a5c4d874469 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SDY_0078 af6154adb800296037af3a5c4d874469 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SDY_0078 af6154adb800296037af3a5c4d874469 428 Pfam PF09312 SurA N-terminal domain 25 142 4.7E-45 T 21-04-2016 IPR015391 SurA N-terminal SDY_0078 af6154adb800296037af3a5c4d874469 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.9E-20 T 21-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SDY_0078 af6154adb800296037af3a5c4d874469 428 SUPERFAMILY SSF54534 283 385 2.29E-32 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.223 T 21-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 SDY_0078 af6154adb800296037af3a5c4d874469 428 Gene3D G3DSA:1.10.3120.10 37 115 4.8E-4 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SDY_0078 af6154adb800296037af3a5c4d874469 428 SUPERFAMILY SSF109998 25 201 9.61E-43 T 21-04-2016 IPR027304 Trigger factor/SurA domain SDY_0078 af6154adb800296037af3a5c4d874469 428 PANTHER PTHR10657 1 428 1.6E-175 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 Pfam PF13616 PPIC-type PPIASE domain 282 383 2.8E-26 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 SUPERFAMILY SSF54534 173 275 3.86E-28 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 PANTHER PTHR10657:SF15 1 428 1.6E-175 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 Gene3D G3DSA:3.10.50.40 166 277 1.1E-32 T 21-04-2016 SDY_0078 af6154adb800296037af3a5c4d874469 428 Gene3D G3DSA:3.10.50.40 282 406 6.8E-37 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 PANTHER PTHR11938:SF111 1 145 4.4E-82 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 Pfam PF13247 4Fe-4S dicluster domain 56 141 1.0E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 PANTHER PTHR11938 1 145 4.4E-82 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 Gene3D G3DSA:3.30.70.20 6 67 1.4E-9 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 Gene3D G3DSA:3.30.70.20 96 150 2.5E-16 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 Gene3D G3DSA:3.30.70.20 68 95 8.2E-14 T 21-04-2016 SDY_3706 4aad4ef899e1f5025975ab8b4d925d6e 157 SUPERFAMILY SSF54862 1 145 8.69E-42 T 21-04-2016 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 Gene3D G3DSA:3.40.50.10220 26 136 4.9E-45 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 5.0E-46 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 2.1E-62 T 21-04-2016 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 3.3E-44 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 SUPERFAMILY SSF102220 27 135 1.44E-34 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4631 fe779cca003951f77a0456c4d85668d2 137 PIRSF PIRSF029225 2 131 1.1E-49 T 21-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 SUPERFAMILY SSF82657 2 87 7.85E-29 T 21-04-2016 IPR002634 BolA protein SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 Pfam PF01722 BolA-like protein 22 79 1.0E-13 T 21-04-2016 IPR002634 BolA protein SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 PIRSF PIRSF003113 1 88 2.2E-21 T 21-04-2016 IPR002634 BolA protein SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 PANTHER PTHR12735:SF24 1 89 3.4E-32 T 21-04-2016 SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 PANTHER PTHR12735 1 89 3.4E-32 T 21-04-2016 SDY_3371 f21cb57a3d3d711536a24e3e3d00287e 89 Gene3D G3DSA:3.30.300.90 4 85 1.0E-27 T 21-04-2016 IPR002634 BolA protein SDY_3722 5bca88a229e57631f3854767e42169b5 441 Gene3D G3DSA:1.10.8.60 314 389 3.0E-28 T 21-04-2016 SDY_3722 5bca88a229e57631f3854767e42169b5 441 PANTHER PTHR32071:SF18 1 441 3.4E-228 T 21-04-2016 SDY_3722 5bca88a229e57631f3854767e42169b5 441 SUPERFAMILY SSF52540 141 385 1.08E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3722 5bca88a229e57631f3854767e42169b5 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.6E-15 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3722 5bca88a229e57631f3854767e42169b5 441 SUPERFAMILY SSF52172 4 185 1.57E-46 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3722 5bca88a229e57631f3854767e42169b5 441 Gene3D G3DSA:1.10.10.60 398 440 7.7E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3722 5bca88a229e57631f3854767e42169b5 441 SMART SM00382 161 304 1.0E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3722 5bca88a229e57631f3854767e42169b5 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SDY_3722 5bca88a229e57631f3854767e42169b5 441 Gene3D G3DSA:3.40.50.2300 2 126 2.6E-38 T 21-04-2016 SDY_3722 5bca88a229e57631f3854767e42169b5 441 Pfam PF00158 Sigma-54 interaction domain 141 307 2.7E-71 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_3722 5bca88a229e57631f3854767e42169b5 441 Gene3D G3DSA:3.40.50.300 139 313 1.3E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3722 5bca88a229e57631f3854767e42169b5 441 Pfam PF00072 Response regulator receiver domain 8 117 1.7E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3722 5bca88a229e57631f3854767e42169b5 441 SUPERFAMILY SSF46689 399 440 1.49E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3722 5bca88a229e57631f3854767e42169b5 441 SMART SM00448 6 117 4.5E-36 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3722 5bca88a229e57631f3854767e42169b5 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_3722 5bca88a229e57631f3854767e42169b5 441 PANTHER PTHR32071 1 441 3.4E-228 T 21-04-2016 SDY_3722 5bca88a229e57631f3854767e42169b5 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_3722 5bca88a229e57631f3854767e42169b5 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.9E-12 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3722 5bca88a229e57631f3854767e42169b5 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 2.9E-12 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 PANTHER PTHR11943 3 345 1.1E-215 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 7.4E-73 T 21-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 2.1E-69 T 21-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 21-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 SUPERFAMILY SSF54197 179 345 2.38E-59 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 Gene3D G3DSA:3.30.428.10 45 175 2.0E-56 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 PIRSF PIRSF000808 1 341 1.9E-128 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 Gene3D G3DSA:3.30.428.10 176 345 2.3E-80 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 4.5E-214 T 21-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 PANTHER PTHR11943:SF2 3 345 1.1E-215 T 21-04-2016 SDY_0705 c0e389cf9b0a78a56ed5e2490926d89a 348 SUPERFAMILY SSF54197 3 177 2.72E-72 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 6.6E-18 T 21-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF47794 355 414 3.61E-17 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Pfam PF13184 NusA-like KH domain 230 297 2.1E-27 T 21-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 PANTHER PTHR22648:SF0 1 448 1.6E-190 T 21-04-2016 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-34 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.272 T 21-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:1.10.150.20 357 414 4.1E-23 T 21-04-2016 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-130 T 21-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-37 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Pfam PF00575 S1 RNA binding domain 134 195 1.6E-4 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF50249 132 199 2.03E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 21-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 PANTHER PTHR22648 1 448 1.6E-190 T 21-04-2016 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:1.10.150.20 431 492 5.7E-24 T 21-04-2016 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:3.30.1480.10 1 124 1.0E-46 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF47794 429 492 3.92E-17 T 21-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SMART SM00316 133 200 7.7E-9 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:3.30.300.20 278 346 5.3E-26 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 21-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Gene3D G3DSA:2.40.50.140 128 197 3.0E-24 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3348 2cbca3a02818451e8906d50b842ed5ae 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.7E-8 T 21-04-2016 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 PANTHER PTHR11374:SF17 1 375 2.8E-245 T 21-04-2016 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 SUPERFAMILY SSF52413 283 387 8.37E-28 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 PANTHER PTHR11374 1 375 2.8E-245 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 SMART SM00984 300 387 2.2E-13 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Gene3D G3DSA:1.10.1040.10 198 284 5.3E-36 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.9E-8 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Gene3D G3DSA:3.40.50.720 1 197 7.7E-66 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 SUPERFAMILY SSF51735 1 194 1.17E-46 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.0E-31 T 21-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 SUPERFAMILY SSF48179 191 287 1.29E-30 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 PIRSF PIRSF000124 1 388 1.0E-141 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Gene3D G3DSA:3.40.50.720 285 388 1.6E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 PIRSF PIRSF500134 1 343 1.4E-119 T 21-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.1E-27 T 21-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SDY_2213 4f1ad5da76c7c73451a3d5d52e0940dc 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 9.3E-102 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 SUPERFAMILY SSF52540 1 216 1.86E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 PANTHER PTHR24220 3 216 2.5E-128 T 21-04-2016 SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 6.3E-94 T 21-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 SMART SM00382 27 214 2.6E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 Gene3D G3DSA:3.40.50.300 1 215 8.9E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 Pfam PF00005 ABC transporter 18 165 1.6E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3614 37921dab3e2edc0b45927b528e3c125e 222 PANTHER PTHR24220:SF470 3 216 2.5E-128 T 21-04-2016 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Pfam PF12848 ABC transporter 224 294 1.1E-11 T 21-04-2016 IPR032781 ABC-transporter extension domain SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Gene3D G3DSA:3.40.50.300 2 270 1.7E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Gene3D G3DSA:3.40.50.300 318 556 1.2E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 SUPERFAMILY SSF52540 9 239 2.04E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 SUPERFAMILY SSF52540 311 501 5.08E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 SMART SM00382 344 514 4.3E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 SMART SM00382 28 230 7.5E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Pfam PF00005 ABC transporter 19 185 1.9E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Pfam PF00005 ABC transporter 336 469 1.7E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 Pfam PF16326 ABC transporter C-terminal domain 561 630 3.1E-21 T 21-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 PANTHER PTHR19211 1 571 3.0E-247 T 21-04-2016 SDY_0922 27218fabb9dc8e0618f62998b2f6ec83 635 PANTHER PTHR19211:SF45 1 571 3.0E-247 T 21-04-2016 SDY_2038 73b02d4ad99a424c0b72a434a130c16e 85 SUPERFAMILY SSF159871 3 85 2.62E-24 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_2038 73b02d4ad99a424c0b72a434a130c16e 85 PANTHER PTHR34156:SF10 2 85 1.8E-62 T 21-04-2016 SDY_2038 73b02d4ad99a424c0b72a434a130c16e 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.5E-19 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_2038 73b02d4ad99a424c0b72a434a130c16e 85 Gene3D G3DSA:3.30.1660.10 18 85 1.5E-26 T 21-04-2016 IPR025543 Dodecin-like SDY_2038 73b02d4ad99a424c0b72a434a130c16e 85 PANTHER PTHR34156 2 85 1.8E-62 T 21-04-2016 SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 PANTHER PTHR21021 1 169 1.3E-57 T 21-04-2016 SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 SUPERFAMILY SSF55781 19 166 3.05E-42 T 21-04-2016 IPR029016 GAF domain-like SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 108 125 - T 21-04-2016 IPR000614 Free Met sulfoxide reductase conserved site SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 Pfam PF13185 GAF domain 52 169 4.0E-12 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 Gene3D G3DSA:3.30.450.40 19 169 1.1E-50 T 21-04-2016 IPR029016 GAF domain-like SDY_1980 e0f709571ff28e02f6bd9bb62f6140b1 183 SMART SM00065 27 179 1.4E-14 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 SUPERFAMILY SSF102705 1 246 3.92E-84 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 Gene3D G3DSA:3.40.1390.30 108 214 5.8E-29 T 21-04-2016 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 4.6E-57 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 Gene3D G3DSA:3.40.1390.30 1 107 5.2E-40 T 21-04-2016 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 PANTHER PTHR13799 1 243 1.1E-92 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SDY_0645 fdf2a5072b17e905a3a7e370c322b21e 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 1.7E-82 T 21-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SDY_3365 529c485d0990637ae91c5c21571c396c 321 SUPERFAMILY SSF103481 41 143 4.84E-12 T 21-04-2016 SDY_3365 529c485d0990637ae91c5c21571c396c 321 PANTHER PTHR22911 1 316 3.4E-162 T 21-04-2016 SDY_3365 529c485d0990637ae91c5c21571c396c 321 PANTHER PTHR22911:SF55 1 316 3.4E-162 T 21-04-2016 SDY_3365 529c485d0990637ae91c5c21571c396c 321 Pfam PF00892 EamA-like transporter family 159 291 1.4E-16 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3365 529c485d0990637ae91c5c21571c396c 321 Pfam PF00892 EamA-like transporter family 7 142 1.8E-27 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_4196 2f9c102f59ebb371182bbca905672a7b 91 Pfam PF03811 InsA N-terminal domain 2 36 1.0E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4196 2f9c102f59ebb371182bbca905672a7b 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4196 2f9c102f59ebb371182bbca905672a7b 91 PANTHER PTHR33293 2 91 1.2E-33 T 21-04-2016 SDY_4196 2f9c102f59ebb371182bbca905672a7b 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2272 265527f3fde7600c7ba69ae658644317 334 PANTHER PTHR16222:SF12 1 331 6.0E-73 T 21-04-2016 SDY_2272 265527f3fde7600c7ba69ae658644317 334 SUPERFAMILY SSF101478 3 326 1.7E-67 T 21-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SDY_2272 265527f3fde7600c7ba69ae658644317 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 1.5E-59 T 21-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SDY_2272 265527f3fde7600c7ba69ae658644317 334 PANTHER PTHR16222 1 331 6.0E-73 T 21-04-2016 SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 SUPERFAMILY SSF54637 3 129 8.33E-38 T 21-04-2016 IPR029069 HotDog domain SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 PIRSF PIRSF003230 1 132 3.2E-21 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 Gene3D G3DSA:3.10.129.10 2 131 6.1E-44 T 21-04-2016 IPR029069 HotDog domain SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 PANTHER PTHR31793:SF8 1 132 1.7E-100 T 21-04-2016 SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 7.4E-37 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 Pfam PF13279 Thioesterase-like superfamily 11 118 8.9E-16 T 21-04-2016 SDY_0287 fe2d12e1b26b75295d643472d0f15724 132 PANTHER PTHR31793 1 132 1.7E-100 T 21-04-2016 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.884 T 21-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 PANTHER PTHR21235:SF15 1 244 6.7E-117 T 21-04-2016 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 Gene3D G3DSA:3.20.20.70 1 243 1.5E-78 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 Pfam PF00977 Histidine biosynthesis protein 1 234 7.8E-76 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.4E-80 T 21-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 SUPERFAMILY SSF51366 1 242 1.08E-65 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_2217 a7fce8d19aab51eab99e00dc61b7ddde 245 PANTHER PTHR21235 1 244 6.7E-117 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 PIRSF PIRSF000112 1 360 7.1E-97 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 5.7E-62 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 PANTHER PTHR11496:SF57 1 361 8.2E-204 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 SUPERFAMILY SSF56796 3 355 1.57E-86 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 Gene3D G3DSA:3.40.50.1970 2 158 1.8E-42 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 PANTHER PTHR11496 1 361 8.2E-204 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 Gene3D G3DSA:1.20.1090.10 160 364 3.5E-70 T 21-04-2016 SDY_3780 57f3af550b8faaea717b02ce8e1a061d 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_2302 7e311482a6b78463178c1da4c455806d 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 64.034 T 21-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 SDY_2302 7e311482a6b78463178c1da4c455806d 511 PANTHER PTHR30504:SF4 1 511 0.0 T 21-04-2016 SDY_2302 7e311482a6b78463178c1da4c455806d 511 Gene3D G3DSA:2.70.98.10 22 395 3.9E-177 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SDY_2302 7e311482a6b78463178c1da4c455806d 511 SUPERFAMILY SSF74650 23 393 3.77E-166 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_2302 7e311482a6b78463178c1da4c455806d 511 PIRSF PIRSF006281 1 511 4.7E-243 T 21-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 SDY_2302 7e311482a6b78463178c1da4c455806d 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 4.5E-201 T 21-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 SDY_2302 7e311482a6b78463178c1da4c455806d 511 SUPERFAMILY SSF81296 397 510 5.32E-34 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_2302 7e311482a6b78463178c1da4c455806d 511 Gene3D G3DSA:2.60.40.10 399 510 1.2E-43 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_2302 7e311482a6b78463178c1da4c455806d 511 PANTHER PTHR30504 1 511 0.0 T 21-04-2016 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 SUPERFAMILY SSF55040 11 155 4.84E-62 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 Gene3D G3DSA:3.30.70.640 3 158 3.5E-70 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.996 T 21-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.5E-74 T 21-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 PANTHER PTHR22960 1 158 1.2E-113 T 21-04-2016 SDY_0823 96aaeda2e4331957aa280da4475fd18d 161 Pfam PF01967 MoaC family 15 150 4.7E-55 T 21-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SDY_1999 d5ce57102754798c46919e133f71a50c 100 PANTHER PTHR33215 3 100 1.5E-16 T 21-04-2016 SDY_1999 d5ce57102754798c46919e133f71a50c 100 SUPERFAMILY SSF46689 4 94 1.79E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1999 d5ce57102754798c46919e133f71a50c 100 Gene3D G3DSA:1.10.10.60 9 90 5.5E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1999 d5ce57102754798c46919e133f71a50c 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.534 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 5.1E-128 T 21-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 SUPERFAMILY SSF53167 3 234 2.36E-94 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 PANTHER PTHR21234:SF8 3 234 7.5E-84 T 21-04-2016 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 Gene3D G3DSA:3.40.50.1580 10 233 1.2E-83 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SDY_4644 de7d83064454fca9fc7f155d8f846931 239 PANTHER PTHR21234 3 234 7.5E-84 T 21-04-2016 IPR018017 Nucleoside phosphorylase SDY_4644 de7d83064454fca9fc7f155d8f846931 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.1E-39 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 SUPERFAMILY SSF53850 149 344 1.09E-28 T 21-04-2016 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 SUPERFAMILY SSF46785 57 168 4.36E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 96 107 1.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 75 86 1.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 86 96 1.9E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 Gene3D G3DSA:1.10.10.10 57 138 4.3E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 PANTHER PTHR30419:SF10 53 346 3.1E-166 T 21-04-2016 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 Gene3D G3DSA:3.40.190.10 150 232 1.7E-17 T 21-04-2016 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 Pfam PF03466 LysR substrate binding domain 147 344 3.0E-29 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 60 119 5.0E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 Gene3D G3DSA:3.40.190.10 233 313 1.1E-6 T 21-04-2016 SDY_1758 1223afbaddddf6a7762565286cad9fb0 351 PANTHER PTHR30419 53 346 3.1E-166 T 21-04-2016 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 PANTHER PTHR21098 1 208 1.1E-140 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 105 199 1.9E-27 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 5 104 2.3E-32 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 PIRSF PIRSF000498 1 212 1.6E-77 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 PANTHER PTHR21098:SF4 1 208 1.1E-140 T 21-04-2016 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 100 185 1.0E-19 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 3 87 2.7E-21 T 21-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 1 93 6.04E-28 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 94 201 3.66E-32 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_1888 ba36ec06b78cd67ac2924910795c560c 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 6.6E-92 T 21-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402 5 235 1.0E-115 T 21-04-2016 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402:SF292 5 235 1.0E-115 T 21-04-2016 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 21-04-2016 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3671 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 Pfam PF03466 LysR substrate binding domain 102 302 5.2E-42 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 SUPERFAMILY SSF53850 102 305 1.09E-37 T 21-04-2016 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 PANTHER PTHR30126:SF5 16 305 2.4E-147 T 21-04-2016 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 PANTHER PTHR30126 16 305 2.4E-147 T 21-04-2016 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 SUPERFAMILY SSF46785 15 96 2.2E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 Gene3D G3DSA:3.40.190.10 95 210 4.6E-18 T 21-04-2016 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 Gene3D G3DSA:3.40.190.10 211 273 5.5E-12 T 21-04-2016 SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 Gene3D G3DSA:1.10.10.10 16 94 7.7E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2818 695ab23e39765e5e1d1bbefefe443b10 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 4.5E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 SUPERFAMILY SSF82866 219 452 1.06E-44 T 21-04-2016 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 Gene3D G3DSA:1.10.3850.10 228 451 1.5E-49 T 21-04-2016 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 Gene3D G3DSA:3.30.2090.10 137 220 3.5E-17 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 PANTHER PTHR32063 1 460 2.8E-281 T 21-04-2016 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 PANTHER PTHR32063:SF19 1 460 2.8E-281 T 21-04-2016 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 Pfam PF00873 AcrB/AcrD/AcrF family 2 450 8.4E-86 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0488 d4207ead321ee2a80681daa8f7012c15 460 SUPERFAMILY SSF82714 136 221 1.57E-16 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_3599 3c14d094252a9ac6c76302764623b163 281 PANTHER PTHR32243 1 279 1.4E-139 T 21-04-2016 SDY_3599 3c14d094252a9ac6c76302764623b163 281 PANTHER PTHR32243:SF31 1 279 1.4E-139 T 21-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 SDY_3599 3c14d094252a9ac6c76302764623b163 281 SUPERFAMILY SSF161098 4 277 5.89E-55 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3599 3c14d094252a9ac6c76302764623b163 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 2.4E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3599 3c14d094252a9ac6c76302764623b163 281 Gene3D G3DSA:1.10.3720.10 4 270 4.2E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4116 09cf87932ef602cab80bb651e3547021 194 SUPERFAMILY SSF159709 13 193 5.36E-59 T 21-04-2016 SDY_4116 09cf87932ef602cab80bb651e3547021 194 PIRSF PIRSF020680 1 194 3.7E-67 T 21-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 SDY_4116 09cf87932ef602cab80bb651e3547021 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 2.0E-61 T 21-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 SDY_4116 09cf87932ef602cab80bb651e3547021 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 3.9E-63 T 21-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-140 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 SMART SM01230 102 379 5.2E-152 T 21-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852:SF15 1 138 8.7E-280 T 21-04-2016 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852:SF15 160 469 8.7E-280 T 21-04-2016 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 SUPERFAMILY SSF55931 102 468 3.83E-139 T 21-04-2016 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 Gene3D G3DSA:3.30.590.10 106 455 1.4E-140 T 21-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852 1 138 8.7E-280 T 21-04-2016 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852 160 469 8.7E-280 T 21-04-2016 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 SUPERFAMILY SSF54368 3 99 3.01E-36 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 Gene3D G3DSA:3.10.20.70 3 105 5.0E-40 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.8E-32 T 21-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 6.1E-221 T 21-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 21-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 21-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3873 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 21-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 PANTHER PTHR11096 1 329 9.4E-105 T 21-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 PIRSF PIRSF005378 2 341 1.0E-113 T 21-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Gene3D G3DSA:3.30.360.20 186 274 2.2E-36 T 21-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 6 325 4.0E-119 T 21-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 SUPERFAMILY SSF55205 5 184 5.62E-64 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 185 274 5.5E-9 T 21-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 158 168 - T 21-04-2016 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Gene3D G3DSA:3.65.10.20 5 178 3.0E-88 T 21-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Gene3D G3DSA:3.65.10.20 275 334 3.0E-88 T 21-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Pfam PF01137 RNA 3'-terminal phosphate cyclase 13 326 9.1E-78 T 21-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 PANTHER PTHR11096:SF0 1 329 9.4E-105 T 21-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 SUPERFAMILY SSF55205 278 336 1.31E-9 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 5 339 37.829 T 21-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 SDY_3655 557dccfe712f6d1a0c5692f720042aef 343 SUPERFAMILY SSF52913 185 279 4.05E-22 T 21-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Gene3D G3DSA:1.10.10.10 88 135 7.5E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PANTHER PTHR30385:SF7 15 238 7.9E-72 T 21-04-2016 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.565 T 21-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Pfam PF04539 Sigma-70 region 3 97 165 1.2E-19 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PIRSF PIRSF000770 2 238 5.7E-41 T 21-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.4E-13 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.4E-13 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.4E-13 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.4E-13 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.4E-13 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 SUPERFAMILY SSF88659 89 156 5.67E-17 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 SUPERFAMILY SSF88659 162 237 3.92E-20 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Gene3D G3DSA:1.10.601.10 11 80 4.2E-15 T 21-04-2016 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Pfam PF04542 Sigma-70 region 2 16 88 1.3E-16 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 6.3E-33 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 2.0E-84 T 21-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Gene3D G3DSA:1.10.10.10 173 238 4.0E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 PANTHER PTHR30385 15 238 7.9E-72 T 21-04-2016 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 Pfam PF04545 Sigma-70, region 4 185 233 6.0E-17 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1095 60bb7004ff422881fc26d911e4232bd0 239 SUPERFAMILY SSF88946 5 88 2.88E-23 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4331 385788e145249c3edf74191bd9fcd513 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4331 385788e145249c3edf74191bd9fcd513 125 PANTHER PTHR33293 1 124 3.8E-42 T 21-04-2016 SDY_4163 385788e145249c3edf74191bd9fcd513 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4163 385788e145249c3edf74191bd9fcd513 125 PANTHER PTHR33293 1 124 3.8E-42 T 21-04-2016 SDY_0023 385788e145249c3edf74191bd9fcd513 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0023 385788e145249c3edf74191bd9fcd513 125 PANTHER PTHR33293 1 124 3.8E-42 T 21-04-2016 SDY_4408 385788e145249c3edf74191bd9fcd513 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4408 385788e145249c3edf74191bd9fcd513 125 PANTHER PTHR33293 1 124 3.8E-42 T 21-04-2016 SDY_4096 385788e145249c3edf74191bd9fcd513 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4096 385788e145249c3edf74191bd9fcd513 125 PANTHER PTHR33293 1 124 3.8E-42 T 21-04-2016 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 312 318 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 PANTHER PTHR18895:SF6 89 388 2.5E-177 T 21-04-2016 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 PIRSF PIRSF037565 10 384 3.5E-166 T 21-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 Pfam PF05175 Methyltransferase small domain 209 380 1.1E-58 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 SUPERFAMILY SSF53335 202 383 7.62E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 11 383 50.418 T 21-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 PANTHER PTHR18895 89 388 2.5E-177 T 21-04-2016 SDY_3267 6f286a871ed03b4b0cf14969aaeb36eb 388 Gene3D G3DSA:3.40.50.150 200 383 2.4E-30 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 1.8E-117 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 SUPERFAMILY SSF52440 2 76 7.63E-16 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 PANTHER PTHR11609:SF5 1 336 1.4E-112 T 21-04-2016 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.522 T 21-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 Gene3D G3DSA:3.40.50.20 1 69 1.0E-24 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 SUPERFAMILY SSF51246 278 353 4.55E-21 T 21-04-2016 IPR011054 Rudiment single hybrid motif SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 PANTHER PTHR11609 1 336 1.4E-112 T 21-04-2016 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 SUPERFAMILY SSF56059 79 274 1.15E-58 T 21-04-2016 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 Pfam PF02222 ATP-grasp domain 88 254 2.1E-57 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SDY_0274 77693f1324b83b0e61259b53ffe6400f 355 Gene3D G3DSA:3.30.470.20 119 353 2.0E-82 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.9E-171 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 SUPERFAMILY SSF111337 1 343 6.28E-139 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 Gene3D G3DSA:2.40.10.240 64 142 1.7E-18 T 21-04-2016 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 Gene3D G3DSA:3.40.1780.10 1 62 2.8E-101 T 21-04-2016 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 Gene3D G3DSA:3.40.1780.10 179 344 2.8E-101 T 21-04-2016 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.721 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 PANTHER PTHR30307 2 350 5.0E-191 T 21-04-2016 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 5.1E-133 T 21-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0329 6c24b5c8dd2910015562bbc01843a363 356 PANTHER PTHR30307:SF0 2 350 5.0E-191 T 21-04-2016 SDY_3088 8e1d8d9d6cfb161a7134b355cc370333 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3088 8e1d8d9d6cfb161a7134b355cc370333 91 PANTHER PTHR33293 2 91 2.4E-31 T 21-04-2016 SDY_3088 8e1d8d9d6cfb161a7134b355cc370333 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3088 8e1d8d9d6cfb161a7134b355cc370333 91 Pfam PF03811 InsA N-terminal domain 2 36 2.7E-18 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 4.4E-23 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 PANTHER PTHR21666:SF184 463 645 1.8E-106 T 21-04-2016 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 SUPERFAMILY SSF53955 479 641 8.13E-52 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_4653 6312a919f829a713e869f8cfea3f3877 645 Gene3D G3DSA:1.10.1240.20 404 472 4.2E-30 T 21-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 Gene3D G3DSA:1.10.530.10 475 639 2.2E-54 T 21-04-2016 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 Gene3D G3DSA:1.25.20.10 29 389 4.1E-124 T 21-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 Pfam PF01464 Transglycosylase SLT domain 483 595 4.1E-34 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 PANTHER PTHR21666 463 645 1.8E-106 T 21-04-2016 SDY_4653 6312a919f829a713e869f8cfea3f3877 645 SUPERFAMILY SSF48435 28 477 6.28E-137 T 21-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 6.9E-145 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PIRSF PIRSF001553 1 289 2.0E-134 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PANTHER PTHR11117 1 289 2.8E-195 T 21-04-2016 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 SUPERFAMILY SSF52210 123 288 8.11E-57 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-39 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-39 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-39 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-39 T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 21-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 Pfam PF00549 CoA-ligase 151 271 4.8E-20 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 Pfam PF02629 CoA binding domain 6 99 3.6E-30 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 SUPERFAMILY SSF51735 1 122 6.47E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 Gene3D G3DSA:3.40.50.261 120 287 5.2E-78 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 21-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 SMART SM00881 4 100 8.1E-35 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_0667 d2356e0f941c9e6e5a2afa3b42067d85 289 Gene3D G3DSA:3.40.50.720 2 119 2.9E-55 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Gene3D G3DSA:3.30.70.20 104 137 2.1E-11 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 PANTHER PTHR11938 1 204 3.5E-159 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 2.2E-144 T 21-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Gene3D G3DSA:3.30.70.20 173 227 6.6E-37 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Gene3D G3DSA:3.30.70.20 29 103 6.6E-37 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 SUPERFAMILY SSF54862 29 271 8.89E-72 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 8.3E-25 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Gene3D G3DSA:1.20.5.480 247 294 1.9E-26 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 PANTHER PTHR11938:SF84 1 204 3.5E-159 T 21-04-2016 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 PIRSF PIRSF036298 1 300 2.4E-165 T 21-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.3E-21 T 21-04-2016 IPR015246 Formate dehydrogenase, transmembrane SDY_3850 02ad4624ae1ed9ec371542f66c8745b1 300 Gene3D G3DSA:3.30.70.20 138 172 6.6E-15 T 21-04-2016 SDY_4229 b8466244ce38c932a8022eb494a92056 121 Pfam PF01527 Transposase 8 87 7.6E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4229 b8466244ce38c932a8022eb494a92056 121 Gene3D G3DSA:1.10.10.60 16 102 1.2E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4229 b8466244ce38c932a8022eb494a92056 121 PANTHER PTHR37936 1 121 6.8E-48 T 21-04-2016 SDY_4229 b8466244ce38c932a8022eb494a92056 121 SUPERFAMILY SSF46689 9 103 3.94E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4432 bb0e3c481aea89087f7aacfa01f160b2 322 PANTHER PTHR10067 1 294 2.1E-122 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SDY_4432 bb0e3c481aea89087f7aacfa01f160b2 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 6.1E-103 T 21-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SDY_4432 bb0e3c481aea89087f7aacfa01f160b2 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.5E-59 T 21-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SDY_4432 bb0e3c481aea89087f7aacfa01f160b2 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.248 T 21-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SDY_0746 179713e5450fb6f911296b33259eb6b9 85 SUPERFAMILY SSF52833 2 82 1.43E-21 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0746 179713e5450fb6f911296b33259eb6b9 85 PANTHER PTHR10168:SF85 4 82 4.2E-42 T 21-04-2016 SDY_0746 179713e5450fb6f911296b33259eb6b9 85 PANTHER PTHR10168 4 82 4.2E-42 T 21-04-2016 SDY_0746 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 52 65 1.2E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_0746 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.2E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_0746 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 66 79 1.2E-10 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_0746 179713e5450fb6f911296b33259eb6b9 85 Pfam PF00462 Glutaredoxin 4 69 1.6E-17 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SDY_0746 179713e5450fb6f911296b33259eb6b9 85 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 3 84 3.1E-45 T 21-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 SDY_0746 179713e5450fb6f911296b33259eb6b9 85 Gene3D G3DSA:3.40.30.10 2 82 4.8E-27 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0746 179713e5450fb6f911296b33259eb6b9 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SDY_2591 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0351 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1476 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0913 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0910 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1244 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1769 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3881 f0c2a90f1498c768083819d075f1abda 71 Pfam PF03400 IS1 transposase 1 71 3.9E-38 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Pfam PF03129 Anticodon binding domain 541 630 1.9E-24 T 21-04-2016 IPR004154 Anticodon-binding SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 4.7E-14 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.30.54.20 130 187 5.6E-20 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PANTHER PTHR11451:SF31 1 642 0.0 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 SMART SM00863 170 219 4.6E-19 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 PANTHER PTHR11451 1 642 0.0 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.379 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 7.1E-249 T 21-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.30.930.10 242 529 6.9E-122 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.40.50.800 532 640 5.2E-40 T 21-04-2016 IPR004154 Anticodon-binding SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 6.8E-52 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.10.20.30 1 64 4.2E-24 T 21-04-2016 IPR012675 Beta-grasp domain SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 SUPERFAMILY SSF52954 530 636 1.4E-34 T 21-04-2016 IPR004154 Anticodon-binding SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Pfam PF02824 TGS domain 4 61 4.3E-12 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 SUPERFAMILY SSF55186 63 241 1.83E-65 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.30.980.10 65 129 7.0E-42 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 Gene3D G3DSA:3.30.980.10 188 224 7.0E-42 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 SUPERFAMILY SSF55681 243 525 1.27E-96 T 21-04-2016 SDY_1814 6fdaed977ab68dac7ec8fe3e8c59fed3 642 SUPERFAMILY SSF81271 3 61 1.28E-16 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 SUPERFAMILY SSF54675 2 138 7.65E-44 T 21-04-2016 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 Gene3D G3DSA:3.20.140.10 3 376 5.7E-146 T 21-04-2016 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 PANTHER PTHR11098:SF14 1 396 1.2E-298 T 21-04-2016 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 SUPERFAMILY SSF51690 120 392 1.14E-86 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 9.5E-85 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 51.111 T 21-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 PIRSF PIRSF000484 1 397 1.1E-62 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 PANTHER PTHR11098 1 396 1.2E-298 T 21-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SDY_2326 76d9a6e1e3eaa0e6a504e94b24a60ba8 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 1.2E-186 T 21-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-37 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.3E-45 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 21-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 21-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 PANTHER PTHR21349 1 101 6.4E-46 T 21-04-2016 SDY_3367 3a22854b60f2d397294992484f1a8b31 103 SUPERFAMILY SSF141091 1 102 4.45E-37 T 21-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 SMART SM00345 7 66 9.7E-18 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.3E-17 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 SUPERFAMILY SSF46785 1 69 1.12E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 Gene3D G3DSA:1.10.10.10 1 68 3.7E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 Gene3D G3DSA:3.40.640.10 127 340 9.6E-52 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 PANTHER PTHR11751 72 442 8.4E-123 T 21-04-2016 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 PANTHER PTHR11751:SF353 72 442 8.4E-123 T 21-04-2016 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 Pfam PF00155 Aminotransferase class I and II 126 393 3.3E-24 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 5.9E-6 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 5.9E-6 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2864 d9e6940435ebad5430841ef6f848a12b 444 SUPERFAMILY SSF53383 84 443 1.15E-82 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_1989 a35ba28a1267fa96b4b7c76038ce2c83 121 PANTHER PTHR24032 1 115 3.5E-15 T 21-04-2016 SDY_1989 a35ba28a1267fa96b4b7c76038ce2c83 121 PANTHER PTHR24032:SF33 1 115 3.5E-15 T 21-04-2016 SDY_1989 a35ba28a1267fa96b4b7c76038ce2c83 121 Gene3D G3DSA:3.60.21.10 2 121 1.3E-15 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_1989 a35ba28a1267fa96b4b7c76038ce2c83 121 SUPERFAMILY SSF56300 2 120 1.71E-16 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82866 297 495 1.31E-48 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1031 0.0 T 21-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:3.30.2090.10 720 805 1.5E-24 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PANTHER PTHR32063 1 1028 0.0 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 670 719 2.49E-24 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 806 854 2.49E-24 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82714 720 806 2.22E-21 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:3.30.2090.10 182 276 3.2E-30 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82866 835 1024 6.28E-39 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 563 669 2.62E-28 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:3.30.70.1430 39 140 5.6E-35 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PANTHER PTHR32063:SF13 1 1028 0.0 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 39 132 2.2E-26 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.4E-107 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:3.30.70.1430 565 669 2.1E-33 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 136 183 1.1E-20 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82693 275 331 1.1E-20 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:1.10.3850.10 281 498 1.1E-58 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Gene3D G3DSA:1.10.3850.10 813 1025 6.9E-51 T 21-04-2016 SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 SUPERFAMILY SSF82714 183 273 3.4E-23 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_1372 c0bb1e3c566ed70cf9afa484478ce039 1033 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SMART SM00488 18 294 0.0064 T 21-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 PANTHER PTHR11472:SF32 1 701 0.0 T 21-04-2016 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Pfam PF06733 DEAD_2 201 264 1.6E-7 T 21-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Pfam PF00270 DEAD/DEAH box helicase 31 95 1.1E-5 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SMART SM00487 23 303 1.6E-5 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SMART SM00491 544 676 4.0E-39 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Pfam PF13307 Helicase C-terminal domain 532 688 1.1E-23 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Gene3D G3DSA:3.40.50.300 26 106 3.1E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Gene3D G3DSA:3.40.50.300 211 265 3.1E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 Gene3D G3DSA:3.40.50.300 153 168 3.1E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SUPERFAMILY SSF52540 199 271 5.27E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SUPERFAMILY SSF52540 46 97 5.27E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SUPERFAMILY SSF52540 451 465 5.27E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 SUPERFAMILY SSF52540 500 670 5.27E-17 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0800 20f361c605e948d079dc3fdd2d5b55ce 716 PANTHER PTHR11472 1 701 0.0 T 21-04-2016 SDY_1018 bf82441b98769fc31ba54f62a3b220db 280 Pfam PF00665 Integrase core domain 72 186 6.3E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1018 bf82441b98769fc31ba54f62a3b220db 280 Gene3D G3DSA:3.30.420.10 66 221 1.5E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1018 bf82441b98769fc31ba54f62a3b220db 280 PANTHER PTHR32552 2 222 5.2E-60 T 21-04-2016 SDY_1018 bf82441b98769fc31ba54f62a3b220db 280 SUPERFAMILY SSF53098 65 221 6.37E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1018 bf82441b98769fc31ba54f62a3b220db 280 Pfam PF13276 HTH-like domain 5 47 9.3E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Pfam PF00288 GHMP kinases N terminal domain 115 181 3.2E-14 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00473 Galactokinase signature 27 45 3.8E-29 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00473 Galactokinase signature 92 103 3.8E-29 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00473 Galactokinase signature 263 277 3.8E-29 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00473 Galactokinase signature 112 130 3.8E-29 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 2.0E-46 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.0E-46 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.0E-46 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 2.0E-46 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.667 T 21-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 SUPERFAMILY SSF55060 205 380 4.96E-51 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PIRSF PIRSF000530 1 382 3.9E-121 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 SUPERFAMILY SSF54211 3 202 1.67E-63 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 2.7E-175 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PANTHER PTHR10457:SF6 2 381 1.5E-150 T 21-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Gene3D G3DSA:3.30.70.890 208 380 8.0E-61 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Gene3D G3DSA:3.30.230.10 5 207 1.4E-78 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 21-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Pfam PF08544 GHMP kinases C terminal 279 361 4.4E-13 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 PANTHER PTHR10457 2 381 1.5E-150 T 21-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SDY_0704 d341ed6bc152d4dbf3b10ab12b1ddefd 382 Pfam PF10509 Galactokinase galactose-binding signature 11 58 1.8E-21 T 21-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 5.7E-9 T 21-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 2.6E-17 T 21-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 Gene3D G3DSA:3.90.1550.10 1 247 2.4E-85 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 Gene3D G3DSA:3.30.390.50 249 332 2.3E-13 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 9.6E-142 T 21-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 SUPERFAMILY SSF55681 3 247 7.21E-81 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 SUPERFAMILY SSF82649 248 335 2.93E-24 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 PANTHER PTHR12561 1 338 8.1E-260 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 PANTHER PTHR12561:SF5 1 338 8.1E-260 T 21-04-2016 SDY_4647 b17e06b4dead9790316b7edb967a67ef 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.538 T 21-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 8.8E-74 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 PANTHER PTHR10584:SF57 1 305 5.3E-186 T 21-04-2016 SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 Gene3D G3DSA:3.40.1190.20 2 304 1.1E-76 T 21-04-2016 IPR029056 Ribokinase-like SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 PANTHER PTHR10584 1 305 5.3E-186 T 21-04-2016 SDY_4546 10a0f1302d2c6fa7b38804ac90ff131c 309 SUPERFAMILY SSF53613 2 302 1.71E-73 T 21-04-2016 IPR029056 Ribokinase-like SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-15 T 21-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.753 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 Gene3D G3DSA:3.40.50.300 1 212 6.5E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.7E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.7E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.7E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.7E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.7E-36 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.4E-76 T 21-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 Pfam PF00406 Adenylate kinase 5 186 3.7E-60 T 21-04-2016 SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 SUPERFAMILY SSF52540 1 213 6.27E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0445 fdeb0982f747d86b0aec9260d39cbad4 214 PANTHER PTHR23359 1 213 1.8E-115 T 21-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 ProSitePatterns PS00275 Shiga/ricin ribosomal inactivating toxins active site signature. 184 200 - T 21-04-2016 IPR017988 Ribosome-inactivating protein conserved site GO:0017148|GO:0030598 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 Gene3D G3DSA:4.10.470.10 193 314 1.6E-61 T 21-04-2016 IPR016139 Ribosome-inactivating protein, subdomain 2 GO:0017148|GO:0030598 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 SUPERFAMILY SSF56371 24 307 1.57E-78 T 21-04-2016 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 PIRSF PIRSF001924 1 312 6.0E-141 T 21-04-2016 IPR016331 Shiga-like toxin, subunit A GO:0017148|GO:0030598 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 Gene3D G3DSA:3.40.420.10 24 192 2.6E-61 T 21-04-2016 IPR016138 Ribosome-inactivating protein, subdomain 1 GO:0017148|GO:0030598 SDY_1389 235d6fcf44ed5a10f9ea2b62de0307b0 315 Pfam PF00161 Ribosome inactivating protein 31 232 4.3E-33 T 21-04-2016 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.3E-22 T 21-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 21-04-2016 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 21-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 21-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1812 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PANTHER PTHR33343 1 65 1.6E-28 T 21-04-2016 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 Gene3D G3DSA:3.40.50.2300 170 331 1.5E-49 T 21-04-2016 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 PANTHER PTHR30146 1 337 9.0E-144 T 21-04-2016 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 SUPERFAMILY SSF47413 2 60 3.1E-19 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 SUPERFAMILY SSF53822 61 332 1.18E-68 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 SMART SM00354 2 72 9.1E-36 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 Pfam PF13377 Periplasmic binding protein-like domain 172 331 7.6E-34 T 21-04-2016 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 PANTHER PTHR30146:SF48 1 337 9.0E-144 T 21-04-2016 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 Gene3D G3DSA:1.10.260.40 3 58 1.2E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.3E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2911 0b6b8be8ba5cf391a63644218a2fec5a 337 Gene3D G3DSA:3.40.50.2300 59 169 9.6E-35 T 21-04-2016 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PANTHER PTHR13697 2 306 3.5E-140 T 21-04-2016 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PIRSF PIRSF000532 1 320 1.8E-131 T 21-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-82 T 21-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 SUPERFAMILY SSF53784 3 309 5.23E-114 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.102 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 21-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 Pfam PF00365 Phosphofructokinase 4 276 4.7E-107 T 21-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 Gene3D G3DSA:3.40.50.450 2 215 5.0E-76 T 21-04-2016 SDY_3831 9f6606c2e93c6ac75fdc60dff2f54955 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.9E-124 T 21-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 SUPERFAMILY SSF52540 93 286 3.77E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 Gene3D G3DSA:3.40.50.300 112 281 4.2E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 PANTHER PTHR30134:SF2 41 288 3.8E-158 T 21-04-2016 SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.6E-99 T 21-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 PANTHER PTHR30134 41 288 3.8E-158 T 21-04-2016 SDY_2924 d3fda57bd3f0827d691f200cfd904651 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 6.3E-35 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.7E-45 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 145 292 2.5E-56 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-126 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.7E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 SUPERFAMILY SSF53671 4 306 7.73E-101 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.022 T 21-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PANTHER PTHR11405 1 305 3.3E-149 T 21-04-2016 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 7 144 1.3E-52 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 PANTHER PTHR11405:SF16 1 305 3.3E-149 T 21-04-2016 SDY_4264 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.2E-29 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SDY_3953 2f622bbf34015348bebf42e8092eec72 246 PANTHER PTHR34136:SF1 2 240 7.2E-105 T 21-04-2016 SDY_3953 2f622bbf34015348bebf42e8092eec72 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 4.0E-53 T 21-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 SDY_3953 2f622bbf34015348bebf42e8092eec72 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 3.2E-82 T 21-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 SDY_3953 2f622bbf34015348bebf42e8092eec72 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.537 T 21-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 SDY_3953 2f622bbf34015348bebf42e8092eec72 246 PANTHER PTHR34136 2 240 7.2E-105 T 21-04-2016 SDY_1645 9d452da19706553da8e05b7590cfc1a4 301 Gene3D G3DSA:3.30.420.10 119 282 2.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1645 9d452da19706553da8e05b7590cfc1a4 301 SUPERFAMILY SSF53098 125 291 2.4E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1645 9d452da19706553da8e05b7590cfc1a4 301 Pfam PF00665 Integrase core domain 124 243 1.0E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1645 9d452da19706553da8e05b7590cfc1a4 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 PANTHER PTHR30009:SF2 6 477 9.2E-264 T 21-04-2016 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.5E-90 T 21-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 PANTHER PTHR30009 6 477 9.2E-264 T 21-04-2016 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Gene3D G3DSA:3.30.1360.60 399 474 5.8E-28 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 6.7E-85 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.6E-25 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 7.3E-14 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 SUPERFAMILY SSF55604 401 474 6.67E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_2049 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.2E-235 T 21-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 PANTHER PTHR13710:SF81 21 364 1.7E-101 T 21-04-2016 SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 SMART SM00487 17 217 2.0E-25 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 Pfam PF00271 Helicase conserved C-terminal domain 241 340 1.5E-11 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 Gene3D G3DSA:3.40.50.300 19 201 2.5E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 SMART SM00490 253 341 2.7E-18 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 SUPERFAMILY SSF52540 66 362 2.19E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 Gene3D G3DSA:3.40.50.300 237 355 3.4E-31 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 143 152 - T 21-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 PANTHER PTHR13710 21 364 1.7E-101 T 21-04-2016 SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 Pfam PF00270 DEAD/DEAH box helicase 24 194 4.2E-19 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3586 3ae023a9a4de8556214ed882958f59e8 385 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 357 3.8E-76 T 21-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SDY_0862 ca80c50701693107a3703a09dc0afce9 351 PANTHER PTHR30040 1 350 6.8E-181 T 21-04-2016 SDY_0862 ca80c50701693107a3703a09dc0afce9 351 Pfam PF02424 ApbE family 42 325 1.0E-78 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SDY_0862 ca80c50701693107a3703a09dc0afce9 351 SUPERFAMILY SSF143631 34 346 8.63E-94 T 21-04-2016 IPR003374 ApbE-like domain SDY_0862 ca80c50701693107a3703a09dc0afce9 351 PIRSF PIRSF006268 2 348 3.0E-89 T 21-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SDY_0862 ca80c50701693107a3703a09dc0afce9 351 PANTHER PTHR30040:SF3 1 350 6.8E-181 T 21-04-2016 SDY_0565 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0565 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0565 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_0565 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0565 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_1030 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1030 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1030 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_1030 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1030 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_0845 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0845 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0845 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_0845 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0845 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_1932 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1932 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1932 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_1932 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1932 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_0720 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0720 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0720 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_0720 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0720 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_4495 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4495 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4495 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_4495 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4495 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_4292 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4292 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4292 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_4292 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4292 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_1991 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1991 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1991 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_1991 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1991 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_3862 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3862 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3862 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_3862 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3862 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_1158 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1158 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1158 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_1158 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1158 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_0467 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0467 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0467 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_0467 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0467 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_2845 914f26d88346b4aa47fdf3ed9e9ea31d 100 SUPERFAMILY SSF46689 1 93 1.0E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2845 914f26d88346b4aa47fdf3ed9e9ea31d 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2845 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215 1 100 1.5E-61 T 21-04-2016 SDY_2845 914f26d88346b4aa47fdf3ed9e9ea31d 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2845 914f26d88346b4aa47fdf3ed9e9ea31d 100 PANTHER PTHR33215:SF4 1 100 1.5E-61 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 SUPERFAMILY SSF116726 231 292 2.62E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Pfam PF03600 Citrate transporter 16 197 1.6E-35 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Pfam PF03600 Citrate transporter 430 608 4.5E-19 T 21-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283 244 268 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283 2 225 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283 448 610 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Gene3D G3DSA:3.30.70.1450 232 311 7.4E-17 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Gene3D G3DSA:3.30.70.1450 322 395 3.5E-20 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283:SF12 244 268 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283:SF12 2 225 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283:SF12 302 353 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283:SF12 448 610 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 SUPERFAMILY SSF116726 321 391 7.19E-16 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 PANTHER PTHR10283 302 353 8.2E-245 T 21-04-2016 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Pfam PF02080 TrkA-C domain 326 390 1.3E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 Pfam PF02080 TrkA-C domain 231 304 6.5E-13 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2488 5def7b5b9cb2fcb1cb110bc88a63793a 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 21-04-2016 IPR031312 Sodium/sulphate symporter, conserved site SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 Gene3D G3DSA:3.40.50.2300 54 176 8.5E-43 T 21-04-2016 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 Gene3D G3DSA:1.10.260.40 2 53 2.9E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 PANTHER PTHR30146 1 316 6.5E-235 T 21-04-2016 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 PANTHER PTHR30146:SF38 1 316 6.5E-235 T 21-04-2016 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 Pfam PF13377 Periplasmic binding protein-like domain 169 312 9.7E-38 T 21-04-2016 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 Gene3D G3DSA:3.40.50.2300 177 306 3.1E-54 T 21-04-2016 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.5E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 SUPERFAMILY SSF53822 61 312 3.44E-85 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 SMART SM00354 1 71 1.9E-35 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3994 459f6003abde963b03cbfb17d780dbc7 316 SUPERFAMILY SSF47413 2 59 3.26E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF50447 175 293 3.93E-25 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Pfam PF09107 Elongation factor SelB, winged helix 560 605 1.2E-19 T 21-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF46785 551 607 5.99E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF50465 272 351 1.44E-7 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 1.0E-31 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Gene3D G3DSA:2.40.30.10 173 296 1.7E-27 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PANTHER PTHR23115:SF129 1 352 2.7E-136 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PANTHER PTHR23115:SF129 413 575 2.7E-136 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF52540 2 165 1.19E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF46785 417 484 1.03E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Gene3D G3DSA:3.40.50.300 3 163 1.0E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 3.8E-273 T 21-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Pfam PF09106 Elongation factor SelB, winged helix 424 480 9.2E-16 T 21-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Gene3D G3DSA:1.10.10.10 416 480 8.3E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PANTHER PTHR23115 1 352 2.7E-136 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 PANTHER PTHR23115 413 575 2.7E-136 T 21-04-2016 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Gene3D G3DSA:1.10.10.10 548 607 8.3E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 Pfam PF03144 Elongation factor Tu domain 2 189 256 2.7E-9 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_4213 91d43f5031fcf91d400cf1be90a359f0 614 SUPERFAMILY SSF46785 488 546 5.45E-7 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2664 ae146162c2866958f18e9421910edb55 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 2.2E-85 T 21-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_2664 ae146162c2866958f18e9421910edb55 237 PANTHER PTHR11609 3 236 8.6E-121 T 21-04-2016 SDY_2664 ae146162c2866958f18e9421910edb55 237 Pfam PF01259 SAICAR synthetase 6 230 2.8E-57 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_2664 ae146162c2866958f18e9421910edb55 237 Gene3D G3DSA:3.30.470.20 94 219 2.4E-50 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_2664 ae146162c2866958f18e9421910edb55 237 Gene3D G3DSA:3.30.200.20 7 93 8.0E-32 T 21-04-2016 SDY_2664 ae146162c2866958f18e9421910edb55 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 21-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_2664 ae146162c2866958f18e9421910edb55 237 PANTHER PTHR11609:SF2 3 236 8.6E-121 T 21-04-2016 SDY_2664 ae146162c2866958f18e9421910edb55 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.835 T 21-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_2664 ae146162c2866958f18e9421910edb55 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 21-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SDY_2664 ae146162c2866958f18e9421910edb55 237 SUPERFAMILY SSF56104 3 232 1.7E-75 T 21-04-2016 SDY_2806 42389b66c69d4b6314aab19100d429a3 242 Gene3D G3DSA:2.40.50.140 6 75 7.4E-10 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2806 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF50249 4 75 3.43E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2806 42389b66c69d4b6314aab19100d429a3 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.1E-37 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SDY_2806 42389b66c69d4b6314aab19100d429a3 242 PANTHER PTHR33991 1 241 9.7E-67 T 21-04-2016 SDY_2806 42389b66c69d4b6314aab19100d429a3 242 Pfam PF02565 Recombination protein O C terminal 83 226 4.8E-23 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SDY_2806 42389b66c69d4b6314aab19100d429a3 242 Pfam PF11967 Recombination protein O N terminal 4 76 1.3E-22 T 21-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SDY_2806 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF57863 86 165 2.59E-7 T 21-04-2016 SDY_2806 42389b66c69d4b6314aab19100d429a3 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.143 T 21-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 21-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 Gene3D G3DSA:3.20.20.10 36 262 3.8E-66 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PANTHER PTHR11482 7 418 3.3E-151 T 21-04-2016 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 4.6E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 4.6E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 4.6E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 4.6E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 4.6E-20 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.794 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 SUPERFAMILY SSF51419 25 276 9.89E-59 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PANTHER PTHR11482:SF5 7 418 3.3E-151 T 21-04-2016 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-28 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 Gene3D G3DSA:2.40.37.10 263 419 3.3E-57 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 5.6E-146 T 21-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 21-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 276 1.7E-68 T 21-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 6.8E-16 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SDY_3055 c3821dac8522c78b55fceeaeda16b11e 420 SUPERFAMILY SSF50621 250 419 1.09E-57 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF500210 1 330 4.1E-124 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.40.190.80 194 327 3.0E-57 T 21-04-2016 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 SUPERFAMILY SSF56655 2 326 1.13E-111 T 21-04-2016 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.30.540.10 2 192 1.7E-78 T 21-04-2016 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 2.2E-83 T 21-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.949 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.4E-70 T 21-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 21-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF000904 1 331 2.2E-120 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SDY_4250 6dce545efd3bad72b609138fd3a8b0fe 332 PANTHER PTHR11556 1 329 1.3E-185 T 21-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SDY_0846 3a606b50f5b1fab63d49105d6a67d3b3 273 Gene3D G3DSA:3.30.420.10 96 255 1.6E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0846 3a606b50f5b1fab63d49105d6a67d3b3 273 Pfam PF00665 Integrase core domain 102 217 2.7E-34 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0846 3a606b50f5b1fab63d49105d6a67d3b3 273 SUPERFAMILY SSF53098 95 257 1.52E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0846 3a606b50f5b1fab63d49105d6a67d3b3 273 PANTHER PTHR32552 1 263 2.9E-74 T 21-04-2016 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 21-04-2016 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 PANTHER PTHR18804 1 38 2.0E-19 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3475 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 21-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.9E-30 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Gene3D G3DSA:3.40.1380.20 326 469 2.1E-48 T 21-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Gene3D G3DSA:2.40.33.10 73 168 8.4E-33 T 21-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Gene3D G3DSA:3.20.20.60 2 72 1.7E-115 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Gene3D G3DSA:3.20.20.60 169 325 1.7E-115 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 SUPERFAMILY SSF50800 70 166 1.67E-29 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 3.0E-151 T 21-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.4E-194 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PANTHER PTHR11817 1 464 1.6E-261 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.3E-77 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 SUPERFAMILY SSF52935 323 469 1.31E-36 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 SUPERFAMILY SSF51621 1 74 2.09E-100 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 SUPERFAMILY SSF51621 156 340 2.09E-100 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1905 f92f55d3047078062dc86c72bcf67dd4 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 21-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 286 6.4E-77 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 285 5.4E-89 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 Gene3D G3DSA:3.20.20.70 1 286 5.4E-95 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 PANTHER PTHR30304 1 286 3.8E-84 T 21-04-2016 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 SUPERFAMILY SSF51569 1 286 8.06E-85 T 21-04-2016 SDY_4132 a642b70fc51a4400ff2c65076d724d55 286 PIRSF PIRSF001359 1 286 4.1E-96 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.418 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 21-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-109 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 158 236 9.5E-68 T 21-04-2016 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 23 99 9.5E-68 T 21-04-2016 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PANTHER PTHR12534 1 235 1.2E-124 T 21-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 Pfam PF00318 Ribosomal protein S2 9 224 3.7E-94 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 SUPERFAMILY SSF52313 6 235 1.96E-96 T 21-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 21-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 21-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0185 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:1.10.287.610 100 152 3.1E-27 T 21-04-2016 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 Pfam PF00005 ABC transporter 28 179 2.5E-39 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 265 1.3E-136 T 21-04-2016 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 PANTHER PTHR24220:SF570 5 236 7.6E-182 T 21-04-2016 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 SMART SM00382 37 229 3.1E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 Gene3D G3DSA:3.40.50.300 2 236 1.3E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 PANTHER PTHR24220 5 236 7.6E-182 T 21-04-2016 SDY_3635 02b339ebea2f5f4b367fd709f28e3fd9 268 SUPERFAMILY SSF52540 4 238 1.62E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1881 7c6fdbcfb8748d36ddba5868dbbf5872 275 Pfam PF00877 NlpC/P60 family 157 267 3.9E-33 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1881 7c6fdbcfb8748d36ddba5868dbbf5872 275 SUPERFAMILY SSF54001 137 269 1.28E-41 T 21-04-2016 SDY_1881 7c6fdbcfb8748d36ddba5868dbbf5872 275 PANTHER PTHR21666 148 269 2.7E-43 T 21-04-2016 SDY_1881 7c6fdbcfb8748d36ddba5868dbbf5872 275 Gene3D G3DSA:3.90.1720.10 137 270 2.3E-47 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 SUPERFAMILY SSF111369 46 219 7.19E-24 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 PANTHER PTHR30367 4 308 1.1E-211 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13533 Biotin-lipoyl like 47 95 2.0E-20 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 289 3.5E-34 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 61.876 T 21-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:1.25.40.10 75 153 6.3E-4 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 PANTHER PTHR30367:SF3 4 308 1.1E-211 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 154 188 2.1E-19 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 47 74 2.1E-19 T 21-04-2016 SDY_3417 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13437 HlyD family secretion protein 156 239 3.3E-9 T 21-04-2016 SDY_1858 d76a3d3965661b7f68059d8501c00579 201 PANTHER PTHR11260:SF154 1 196 1.5E-137 T 21-04-2016 SDY_1858 d76a3d3965661b7f68059d8501c00579 201 SUPERFAMILY SSF47616 83 199 4.37E-30 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_1858 d76a3d3965661b7f68059d8501c00579 201 SUPERFAMILY SSF52833 1 79 1.97E-18 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1858 d76a3d3965661b7f68059d8501c00579 201 PANTHER PTHR11260 1 196 1.5E-137 T 21-04-2016 SDY_1858 d76a3d3965661b7f68059d8501c00579 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 8.0E-18 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal SDY_1858 d76a3d3965661b7f68059d8501c00579 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 75 3.5E-9 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_1858 d76a3d3965661b7f68059d8501c00579 201 Gene3D G3DSA:1.20.1050.10 89 188 1.0E-40 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_1858 d76a3d3965661b7f68059d8501c00579 201 Gene3D G3DSA:3.40.30.10 1 88 1.4E-25 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 PANTHER PTHR22976:SF1 6 346 3.4E-202 T 21-04-2016 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.9E-125 T 21-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 PANTHER PTHR22976 6 346 3.4E-202 T 21-04-2016 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 SUPERFAMILY SSF102114 6 313 1.27E-94 T 21-04-2016 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 SMART SM00729 43 255 4.3E-43 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 9.2E-20 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.745 T 21-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 Pfam PF04055 Radical SAM superfamily 50 203 6.2E-18 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 Gene3D G3DSA:3.20.20.70 6 314 1.2E-106 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 PIRSF PIRSF001619 1 319 3.3E-140 T 21-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0831 26c877f4582ca8bb7b7ee7970d85ffca 346 SMART SM00876 220 312 2.6E-47 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.18 T 21-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 Gene3D G3DSA:3.30.360.10 163 308 7.5E-48 T 21-04-2016 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 4.2E-32 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 SUPERFAMILY SSF51735 1 171 8.17E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 21-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 SMART SM00859 3 146 6.4E-53 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 Gene3D G3DSA:3.40.50.720 1 162 1.6E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.7E-19 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 SUPERFAMILY SSF55347 154 308 2.04E-49 T 21-04-2016 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.1E-124 T 21-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3793 875d6a103d0d055270a1d5d6b663cca3 334 PANTHER PTHR32338 1 334 1.1E-159 T 21-04-2016 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 2.6E-14 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Gene3D G3DSA:3.10.50.40 151 215 1.3E-9 T 21-04-2016 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Gene3D G3DSA:3.30.70.1050 1 117 1.4E-39 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 SUPERFAMILY SSF102735 1 131 5.62E-39 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 PANTHER PTHR30560:SF3 1 430 2.5E-150 T 21-04-2016 SDY_0296 d19599700f06534b588928c05a9fcaff 432 PANTHER PTHR30560 1 430 2.5E-150 T 21-04-2016 SDY_0296 d19599700f06534b588928c05a9fcaff 432 SUPERFAMILY SSF54534 97 241 2.16E-37 T 21-04-2016 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.0E-41 T 21-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Gene3D G3DSA:1.10.3120.10 216 388 1.4E-62 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 SUPERFAMILY SSF109998 248 429 3.4E-47 T 21-04-2016 IPR027304 Trigger factor/SurA domain SDY_0296 d19599700f06534b588928c05a9fcaff 432 PIRSF PIRSF003095 1 432 6.6E-131 T 21-04-2016 IPR005215 Trigger factor GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 4.2E-40 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.131 T 21-04-2016 IPR005215 Trigger factor GO:0015031 SDY_0296 d19599700f06534b588928c05a9fcaff 432 TIGRFAM TIGR00115 tig: trigger factor 13 411 2.7E-143 T 21-04-2016 IPR005215 Trigger factor GO:0015031 SDY_P044 204d43d71baa1ba177c57cd06fb8a62f 55 PANTHER PTHR22749:SF0 1 52 2.0E-18 T 21-04-2016 SDY_P044 204d43d71baa1ba177c57cd06fb8a62f 55 SUPERFAMILY SSF52374 6 49 9.01E-11 T 21-04-2016 SDY_P044 204d43d71baa1ba177c57cd06fb8a62f 55 Pfam PF06574 FAD synthetase 3 53 8.8E-20 T 21-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SDY_P044 204d43d71baa1ba177c57cd06fb8a62f 55 Gene3D G3DSA:3.40.50.620 3 54 1.2E-18 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_P044 204d43d71baa1ba177c57cd06fb8a62f 55 PANTHER PTHR22749 1 52 2.0E-18 T 21-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 21-04-2016 IPR019844 Cold-shock conserved site SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 Gene3D G3DSA:2.40.50.140 1 65 1.9E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PANTHER PTHR11544:SF52 1 74 4.3E-48 T 21-04-2016 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.1E-43 T 21-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 SUPERFAMILY SSF50249 1 66 8.57E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PANTHER PTHR11544 1 74 4.3E-48 T 21-04-2016 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 SMART SM00357 3 67 6.1E-29 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 PIRSF PIRSF002599 1 74 2.9E-23 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 SDY_2381 2af9790425e583c73e4c4e65cf6a70d1 74 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.4E-29 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 Gene3D G3DSA:3.40.50.300 25 183 9.0E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 Pfam PF12592 Protein of unknown function (DUF3763) 445 497 6.2E-22 T 21-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 PANTHER PTHR32204 7 497 8.2E-148 T 21-04-2016 SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.859 T 21-04-2016 IPR023671 ATPase RavA GO:0005737|GO:0016887 SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 SMART SM00382 38 187 4.6E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 SUPERFAMILY SSF52540 12 264 8.6E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4002 a31165a1941165ee85f3b9e6f82ef2cc 498 Pfam PF07728 AAA domain (dynein-related subfamily) 42 171 1.3E-24 T 21-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 SUPERFAMILY SSF54637 12 154 5.9E-24 T 21-04-2016 IPR029069 HotDog domain SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 Pfam PF03061 Thioesterase superfamily 57 145 1.3E-16 T 21-04-2016 IPR006683 Thioesterase domain SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 PANTHER PTHR12418 7 154 2.6E-88 T 21-04-2016 SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 2.3E-14 T 21-04-2016 IPR003736 Phenylacetic acid degradation-related domain SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 Gene3D G3DSA:3.10.129.10 17 154 4.2E-29 T 21-04-2016 IPR029069 HotDog domain SDY_3923 714a7d5b49ef231c4d8983e3321969d8 155 PANTHER PTHR12418:SF35 7 154 2.6E-88 T 21-04-2016 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 21 373 1.1E-216 T 21-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 Gene3D G3DSA:3.20.20.30 20 371 2.0E-84 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 PANTHER PTHR30011:SF1 6 371 5.1E-159 T 21-04-2016 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 Pfam PF00296 Luciferase-like monooxygenase 21 338 6.9E-68 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 PANTHER PTHR30011 6 371 5.1E-159 T 21-04-2016 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 SUPERFAMILY SSF51679 21 371 8.24E-76 T 21-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SDY_0987 a72439742e5fed612601fcb4dcbf0aa6 382 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 20 379 70.084 T 21-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 SDY_1548 e4cb05f20b02dc18b70f51d00295c51d 460 Pfam PF13520 Amino acid permease 5 442 2.8E-79 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1548 e4cb05f20b02dc18b70f51d00295c51d 460 PIRSF PIRSF006060 1 459 9.0E-44 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1548 e4cb05f20b02dc18b70f51d00295c51d 460 PANTHER PTHR11785:SF77 1 456 1.4E-235 T 21-04-2016 SDY_1548 e4cb05f20b02dc18b70f51d00295c51d 460 PANTHER PTHR11785 1 456 1.4E-235 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1548 e4cb05f20b02dc18b70f51d00295c51d 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 7.2E-185 T 21-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Gene3D G3DSA:3.50.50.60 3 243 1.4E-102 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Gene3D G3DSA:3.50.50.60 349 409 1.4E-102 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 6.7E-240 T 21-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 SUPERFAMILY SSF46977 425 522 1.14E-31 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Gene3D G3DSA:3.90.700.10 244 348 6.2E-37 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.7E-14 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Gene3D G3DSA:1.20.58.100 420 521 8.4E-35 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PANTHER PTHR11632:SF27 2 522 1.4E-273 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.9E-11 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.9E-11 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.7E-5 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.7E-5 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 SUPERFAMILY SSF56425 238 353 1.94E-40 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 SUPERFAMILY SSF51905 356 447 9.26E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 SUPERFAMILY SSF51905 4 255 9.26E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 PANTHER PTHR11632 2 522 1.4E-273 T 21-04-2016 SDY_2815 a3e67047b3097407afcdfea5d8759d42 540 Pfam PF00890 FAD binding domain 10 392 3.0E-106 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 SUPERFAMILY SSF52016 163 371 9.16E-73 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Gene3D G3DSA:3.30.499.10 403 519 3.6E-64 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Gene3D G3DSA:3.40.1060.10 520 682 8.1E-89 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Gene3D G3DSA:3.20.19.10 162 361 1.8E-95 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 21-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 PANTHER PTHR11670 305 860 0.0 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.8E-98 T 21-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 PIRSF PIRSF036687 1 859 0.0 T 21-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 9.8E-69 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 SUPERFAMILY SSF74778 2 160 6.02E-70 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 PANTHER PTHR11670:SF39 305 860 0.0 T 21-04-2016 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.1E-40 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 SUPERFAMILY SSF53732 379 859 2.75E-150 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0025 696d6fb186b4426b61fdf1020aa83738 865 Gene3D G3DSA:3.30.499.10 684 859 9.7E-56 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Gene3D G3DSA:2.60.260.20 110 199 2.5E-16 T 21-04-2016 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Gene3D G3DSA:2.60.260.20 201 276 5.9E-17 T 21-04-2016 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Pfam PF01556 DnaJ C terminal domain 120 276 6.7E-34 T 21-04-2016 IPR002939 Chaperone DnaJ, C-terminal SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PANTHER PTHR24078:SF190 4 301 2.3E-71 T 21-04-2016 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 SMART SM00271 4 61 1.1E-24 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 SUPERFAMILY SSF46565 1 100 7.85E-27 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 SUPERFAMILY SSF49493 204 284 1.7E-17 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PRINTS PR00625 DnaJ domain signature 61 80 7.8E-17 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PRINTS PR00625 DnaJ domain signature 25 40 7.8E-17 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PRINTS PR00625 DnaJ domain signature 7 25 7.8E-17 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PRINTS PR00625 DnaJ domain signature 41 61 7.8E-17 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 56.985 T 21-04-2016 IPR023859 DNA-binding protein, curved-DNA SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 21-04-2016 IPR018253 DnaJ domain, conserved site SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Gene3D G3DSA:1.10.287.110 2 105 3.4E-28 T 21-04-2016 IPR001623 DnaJ domain SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 PANTHER PTHR24078 4 301 2.3E-71 T 21-04-2016 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 SUPERFAMILY SSF49493 115 210 1.83E-15 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SDY_0974 18d75b1cd98265139ea34bd382ce76bd 306 Pfam PF00226 DnaJ domain 5 66 3.2E-23 T 21-04-2016 IPR001623 DnaJ domain SDY_3352 ee9b24c81eaabf75d4c980ccfb691c01 535 Gene3D G3DSA:3.40.720.10 220 456 4.5E-11 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_3352 ee9b24c81eaabf75d4c980ccfb691c01 535 Pfam PF00884 Sulfatase 218 456 2.7E-43 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_3352 ee9b24c81eaabf75d4c980ccfb691c01 535 SUPERFAMILY SSF53649 220 457 8.6E-22 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_3352 ee9b24c81eaabf75d4c980ccfb691c01 535 PANTHER PTHR30443 5 529 0.0 T 21-04-2016 SDY_3352 ee9b24c81eaabf75d4c980ccfb691c01 535 PANTHER PTHR30443:SF5 5 529 0.0 T 21-04-2016 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.6E-26 T 21-04-2016 IPR023214 HAD-like domain SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 3.6E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 3.6E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 3.6E-10 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 181 5.7E-21 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PANTHER PTHR18901:SF20 1 215 1.4E-152 T 21-04-2016 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 SUPERFAMILY SSF56784 4 203 9.98E-47 T 21-04-2016 IPR023214 HAD-like domain SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 Gene3D G3DSA:1.10.150.240 19 64 4.3E-6 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 PANTHER PTHR18901 1 215 1.4E-152 T 21-04-2016 SDY_2489 e697cb66ddbba1923adf4799cffe2ac1 216 Gene3D G3DSA:3.40.50.1000 65 213 3.8E-50 T 21-04-2016 IPR023214 HAD-like domain SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF53659 430 754 1.97E-92 T 21-04-2016 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.10750 569 726 3.1E-55 T 21-04-2016 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.5E-102 T 21-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 21-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 PANTHER PTHR23406 31 452 2.8E-179 T 21-04-2016 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.10380 11 160 5.3E-52 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.3E-19 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 SMART SM01274 18 151 2.4E-83 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 SMART SM00919 163 401 9.7E-142 T 21-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Gene3D G3DSA:3.40.50.720 161 448 2.4E-89 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF53223 10 161 2.16E-54 T 21-04-2016 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 PIRSF PIRSF036684 1 758 0.0 T 21-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 SUPERFAMILY SSF51735 163 453 2.08E-86 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2645 98fd3b2f455fe6bdc64fada648c6d2a3 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.4E-29 T 21-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 Gene3D G3DSA:3.40.190.10 192 245 8.2E-12 T 21-04-2016 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 SUPERFAMILY SSF53850 89 295 6.33E-30 T 21-04-2016 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 PANTHER PTHR30293:SF0 1 301 3.7E-150 T 21-04-2016 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 Pfam PF03466 LysR substrate binding domain 87 289 5.2E-32 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 Gene3D G3DSA:1.10.10.10 1 80 3.2E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 PANTHER PTHR30293 1 301 3.7E-150 T 21-04-2016 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.9E-22 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 Gene3D G3DSA:3.40.190.10 81 191 2.6E-18 T 21-04-2016 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2245 94215e8b8ee8e12a5a18dad37a7fd05a 305 SUPERFAMILY SSF46785 1 86 5.3E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2342 454213883fd36aaa6390ea9103ff99a6 410 PANTHER PTHR30528 3 410 1.4E-144 T 21-04-2016 SDY_2342 454213883fd36aaa6390ea9103ff99a6 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 8.5E-85 T 21-04-2016 IPR009351 Protein of unknown function DUF1006 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.562 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 PIRSF PIRSF039102 35 306 1.8E-100 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 5.5E-73 T 21-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Gene3D G3DSA:3.30.470.20 85 103 2.4E-53 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Gene3D G3DSA:3.30.470.20 181 305 2.4E-53 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Gene3D G3DSA:3.40.50.20 3 84 7.3E-28 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 SUPERFAMILY SSF56059 97 302 8.42E-57 T 21-04-2016 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 PANTHER PTHR23132:SF0 1 305 2.4E-101 T 21-04-2016 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Gene3D G3DSA:3.30.1490.20 107 180 2.6E-26 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 5.3E-113 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 SUPERFAMILY SSF52440 3 96 1.63E-29 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 PANTHER PTHR23132 1 305 2.4E-101 T 21-04-2016 SDY_0122 60726138b6cf9af46de35456de6ba5fa 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 6.4E-21 T 21-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0207 08de24ea625185059fa88f56695d2bc8 86 SUPERFAMILY SSF101744 1 85 6.8E-30 T 21-04-2016 IPR023534 Rof/RNase P-like SDY_0207 08de24ea625185059fa88f56695d2bc8 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 4.0E-29 T 21-04-2016 IPR009778 Modulator of Rho-dependent transcription termination SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 Gene3D G3DSA:3.75.10.20 3 446 1.3E-231 T 21-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 2 442 58.012 T 21-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 441 2.3E-239 T 21-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 PANTHER PTHR30420 3 442 0.0 T 21-04-2016 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 PANTHER PTHR30420:SF2 3 442 0.0 T 21-04-2016 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 SUPERFAMILY SSF55909 4 442 1.28E-201 T 21-04-2016 SDY_1532 9e1b2ef0a459c12048b6a36c3980efcb 448 Pfam PF04996 Succinylarginine dihydrolase 4 441 2.9E-209 T 21-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 SDY_2380 3cfca27767229b6aaa0738a6149bd45a 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.512 T 21-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SDY_2380 3cfca27767229b6aaa0738a6149bd45a 106 PANTHER PTHR33473 1 106 9.9E-48 T 21-04-2016 SDY_2380 3cfca27767229b6aaa0738a6149bd45a 106 SUPERFAMILY SSF54736 22 105 1.99E-33 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SDY_2380 3cfca27767229b6aaa0738a6149bd45a 106 Gene3D G3DSA:3.30.1390.10 4 106 2.7E-45 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SDY_2380 3cfca27767229b6aaa0738a6149bd45a 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.0E-34 T 21-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 PANTHER PTHR20857 2 207 1.6E-70 T 21-04-2016 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.818 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 Gene3D G3DSA:3.20.20.70 6 204 1.6E-66 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 2.3E-58 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 SUPERFAMILY SSF51391 6 205 4.19E-63 T 21-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_3733 f74d3d954476f6bd20f7aafa18e3d6b1 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 20 189 5.3E-55 T 21-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 21-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 21-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 SUPERFAMILY SSF52821 1 152 6.02E-41 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 Gene3D G3DSA:3.40.250.10 1 151 6.0E-47 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 Pfam PF00581 Rhodanese-like domain 165 270 2.4E-13 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 Pfam PF00581 Rhodanese-like domain 9 128 3.9E-18 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 PANTHER PTHR11364 5 278 2.9E-112 T 21-04-2016 SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 SMART SM00450 155 275 1.7E-24 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 SMART SM00450 7 132 1.9E-27 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 Gene3D G3DSA:3.40.250.10 152 278 3.0E-41 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2717 c8c97cbfe03dc8d37d7eee31844408c6 281 SUPERFAMILY SSF52821 165 278 1.13E-32 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4390 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 66 129 4.5E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4390 8a819b1319a310a32369306016a392b8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.6E-23 T 21-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 21-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 PANTHER PTHR30053 1 188 7.8E-96 T 21-04-2016 SDY_4390 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.30.30.30 2 64 6.2E-26 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_4390 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 130 187 3.6E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4390 8a819b1319a310a32369306016a392b8 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.871 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.5E-76 T 21-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 PIRSF PIRSF005901 2 188 9.6E-67 T 21-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_4390 8a819b1319a310a32369306016a392b8 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-26 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 70 128 2.31E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4390 8a819b1319a310a32369306016a392b8 188 SMART SM01185 69 123 1.6E-26 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 SMART SM00841 131 186 6.9E-33 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 9.7E-23 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SDY_4390 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 Gene3D G3DSA:1.20.1250.20 205 384 7.9E-9 T 21-04-2016 SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 Gene3D G3DSA:1.20.1250.20 8 185 2.4E-23 T 21-04-2016 SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 PANTHER PTHR23535 1 395 0.0 T 21-04-2016 SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 PANTHER PTHR23535:SF1 1 395 0.0 T 21-04-2016 SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 Pfam PF07690 Major Facilitator Superfamily 13 341 1.4E-27 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1593 9ebb87af609234e7d0a7c49b5cae03bb 395 SUPERFAMILY SSF103473 7 384 5.49E-44 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 Gene3D G3DSA:1.10.10.10 1 69 2.9E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 Pfam PF00155 Aminotransferase class I and II 122 461 1.0E-36 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 SUPERFAMILY SSF46785 1 70 4.89E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 SUPERFAMILY SSF53383 84 465 4.08E-92 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 PANTHER PTHR11751:SF275 84 470 4.6E-241 T 21-04-2016 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 Gene3D G3DSA:3.40.640.10 133 348 7.5E-69 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 SMART SM00345 7 66 1.2E-23 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 PANTHER PTHR11751 84 470 4.6E-241 T 21-04-2016 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.8E-16 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4601 582fd740d952aa4974c535a3d4bccd8c 470 Gene3D G3DSA:3.90.1150.10 349 466 4.8E-10 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 SUPERFAMILY SSF55021 6 68 3.71E-9 T 21-04-2016 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 Pfam PF01842 ACT domain 8 69 5.6E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PANTHER PTHR10520 13 274 1.7E-139 T 21-04-2016 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 Gene3D G3DSA:3.40.50.170 86 277 1.4E-57 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.408 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 SUPERFAMILY SSF53328 86 279 4.71E-61 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PANTHER PTHR10520:SF7 13 274 1.7E-139 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.8E-133 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 Pfam PF00551 Formyl transferase 86 262 5.0E-56 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 Gene3D G3DSA:3.30.70.260 6 71 4.0E-12 T 21-04-2016 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 4.4E-70 T 21-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SDY_1284 2aae155f6521d8556e3de3613e64d8b4 280 PIRSF PIRSF036480 4 280 2.4E-114 T 21-04-2016 SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 PANTHER PTHR10204 1 172 1.2E-133 T 21-04-2016 SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 Gene3D G3DSA:3.40.50.360 2 171 4.6E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 Pfam PF02525 Flavodoxin-like fold 2 167 2.8E-39 T 21-04-2016 IPR003680 Flavodoxin-like fold SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 PANTHER PTHR10204:SF41 1 172 1.2E-133 T 21-04-2016 SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 SUPERFAMILY SSF52218 2 170 1.42E-45 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0069 849d03933cdbc7ee1eb7b9010037fdf4 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 54.698 T 21-04-2016 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Gene3D G3DSA:1.20.990.10 281 383 3.4E-40 T 21-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 8.2E-289 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 SUPERFAMILY SSF52218 60 208 8.58E-44 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 SUPERFAMILY SSF52343 444 599 1.96E-52 T 21-04-2016 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 9.8E-23 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00369 Flavodoxin signature 145 155 1.7E-14 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00369 Flavodoxin signature 65 78 1.7E-14 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00369 Flavodoxin signature 169 188 1.7E-14 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00369 Flavodoxin signature 113 124 1.7E-14 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Pfam PF00667 FAD binding domain 230 424 1.9E-26 T 21-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Gene3D G3DSA:2.40.30.10 384 454 2.5E-40 T 21-04-2016 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Gene3D G3DSA:2.40.30.10 229 280 2.5E-40 T 21-04-2016 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PANTHER PTHR19384 57 599 1.2E-234 T 21-04-2016 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PANTHER PTHR19384:SF76 57 599 1.2E-234 T 21-04-2016 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 52.845 T 21-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PIRSF PIRSF000207 1 599 1.1E-282 T 21-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Gene3D G3DSA:3.40.50.360 56 211 1.9E-47 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Pfam PF00258 Flavodoxin 66 196 4.7E-32 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 SUPERFAMILY SSF63380 227 446 1.52E-63 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 2.8E-30 T 21-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SDY_2966 a97a643f290390b3c17aec4547d32cb5 599 Gene3D G3DSA:3.40.50.80 455 599 2.1E-59 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 PANTHER PTHR38831 8 310 1.3E-50 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 Gene3D G3DSA:3.30.1300.30 212 325 7.2E-32 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 Gene3D G3DSA:3.30.1300.30 28 106 1.8E-26 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 PIRSF PIRSF002786 4 325 1.9E-66 T 21-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 Pfam PF03934 Type II secretion system (T2SS), protein K 32 312 2.4E-84 T 21-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 PANTHER PTHR38831:SF1 8 310 1.3E-50 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 Gene3D G3DSA:1.10.40.60 107 211 9.4E-40 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 SUPERFAMILY SSF54523 39 102 1.55E-17 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 SUPERFAMILY SSF158544 214 282 2.62E-18 T 21-04-2016 SDY_3100 cc90e2f3b0ba890a0cc9aa6bc66d5581 325 SUPERFAMILY SSF158544 103 211 1.8E-31 T 21-04-2016 SDY_4144 eb16ae338b13e5e18df59443ae3abd74 159 Pfam PF06711 Protein of unknown function (DUF1198) 10 151 5.2E-66 T 21-04-2016 IPR009587 Protein of unknown function DUF1198 SDY_4144 eb16ae338b13e5e18df59443ae3abd74 159 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 10 154 4.0E-80 T 21-04-2016 IPR009587 Protein of unknown function DUF1198 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 SUPERFAMILY SSF53850 22 323 1.36E-62 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 PANTHER PTHR30006:SF3 1 326 2.9E-138 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 6.9E-195 T 21-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 292 1.0E-16 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 Gene3D G3DSA:3.40.190.10 122 258 5.1E-25 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 Gene3D G3DSA:3.40.190.10 259 315 5.2E-15 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 Gene3D G3DSA:3.40.190.10 15 120 5.2E-15 T 21-04-2016 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 2.1E-156 T 21-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 21-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 SDY_0095 e6ac5ece827f97211c04e24accedde47 327 PANTHER PTHR30006 1 326 2.9E-138 T 21-04-2016 SDY_0969 271cd63d388702f839784be45e6e361c 230 Gene3D G3DSA:1.10.10.10 131 227 4.4E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0969 271cd63d388702f839784be45e6e361c 230 Gene3D G3DSA:3.40.50.2300 2 126 1.2E-30 T 21-04-2016 SDY_0969 271cd63d388702f839784be45e6e361c 230 SMART SM00448 3 113 1.1E-30 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0969 271cd63d388702f839784be45e6e361c 230 PANTHER PTHR26402 3 230 5.0E-102 T 21-04-2016 SDY_0969 271cd63d388702f839784be45e6e361c 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 1.1E-16 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_0969 271cd63d388702f839784be45e6e361c 230 SMART SM00862 153 225 4.8E-18 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_0969 271cd63d388702f839784be45e6e361c 230 PANTHER PTHR26402:SF596 3 230 5.0E-102 T 21-04-2016 SDY_0969 271cd63d388702f839784be45e6e361c 230 SUPERFAMILY SSF52172 3 190 1.76E-32 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0969 271cd63d388702f839784be45e6e361c 230 Pfam PF00072 Response regulator receiver domain 5 113 1.8E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3872 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF50447 151 299 4.64E-34 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3872 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-294 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.5E-58 T 21-04-2016 SDY_3872 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.50.250 483 577 1.9E-40 T 21-04-2016 SDY_3872 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.40.50.300 3 205 1.9E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3872 82f33c2557715805d8af5a024061e004 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.5E-10 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PANTHER PTHR23115 3 602 0.0 T 21-04-2016 SDY_3872 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.870 304 399 7.9E-38 T 21-04-2016 SDY_3872 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.240 400 478 3.0E-31 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3872 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF52540 3 219 1.38E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3872 82f33c2557715805d8af5a024061e004 607 PANTHER PTHR23115:SF14 3 602 0.0 T 21-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.571213E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.571213E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.571213E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.571213E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.571213E-15 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 2.2E-25 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_3872 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 398 512 2.16E-26 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_3872 82f33c2557715805d8af5a024061e004 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_3872 82f33c2557715805d8af5a024061e004 607 Pfam PF00679 Elongation factor G C-terminus 397 477 4.5E-22 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3872 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.30.10 206 303 2.1E-26 T 21-04-2016 SDY_3872 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 302 387 1.69E-15 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Gene3D G3DSA:3.40.50.300 417 619 8.2E-90 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF52540 368 415 1.06E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF52540 5 228 1.06E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 21-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PANTHER PTHR30612 550 901 0.0 T 21-04-2016 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PANTHER PTHR30612 1 520 0.0 T 21-04-2016 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF81886 620 840 6.02E-84 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF81886 877 889 6.02E-84 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF81767 227 368 5.23E-44 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SMART SM00957 6 402 0.0 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SUPERFAMILY SSF52540 416 618 3.74E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.882 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 413 426 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 339 361 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 101 115 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 376 393 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 117 127 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 63 87 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 PRINTS PR00906 SecA protein signature 170 190 7.5E-74 T 21-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 SMART SM00958 228 358 1.6E-83 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Gene3D G3DSA:1.10.3060.10 648 831 5.9E-58 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Pfam PF07517 SecA DEAD-like domain 7 402 1.3E-131 T 21-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Gene3D G3DSA:3.90.1440.10 230 368 1.0E-46 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Pfam PF02810 SEC-C motif 881 899 9.9E-11 T 21-04-2016 IPR004027 SEC-C motif SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Gene3D G3DSA:3.40.50.300 369 416 2.9E-125 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Gene3D G3DSA:3.40.50.300 2 228 2.9E-125 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 5.0E-67 T 21-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SDY_0128 d1b9896ec49c42ae6be8f1d73ef2ff4e 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.7E-39 T 21-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 PIRSF PIRSF009393 2 711 6.5E-284 T 21-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 PANTHER PTHR11751 102 572 2.7E-206 T 21-04-2016 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Gene3D G3DSA:3.40.640.10 101 411 1.4E-112 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Gene3D G3DSA:3.40.50.220 1 100 5.5E-32 T 21-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 SUPERFAMILY SSF55904 563 711 1.57E-44 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Gene3D G3DSA:3.90.100.10 586 711 3.2E-38 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 3.4E-199 T 21-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 SUPERFAMILY SSF52172 1 100 7.45E-26 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 PANTHER PTHR11751:SF425 102 572 2.7E-206 T 21-04-2016 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 95 7.0E-14 T 21-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 7.8E-47 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 SUPERFAMILY SSF53383 101 559 6.58E-121 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3107 1ebacbca4536393e3abbf3d40647ac27 711 Gene3D G3DSA:3.90.1150.10 413 585 3.4E-75 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_4815 dc73bc4571c8bce3ecc6e12a7b20563e 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4815 dc73bc4571c8bce3ecc6e12a7b20563e 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4815 dc73bc4571c8bce3ecc6e12a7b20563e 90 PANTHER PTHR33293 1 89 1.7E-20 T 21-04-2016 SDY_4815 dc73bc4571c8bce3ecc6e12a7b20563e 90 PANTHER PTHR33293:SF2 1 89 1.7E-20 T 21-04-2016 SDY_3735 82849d8878d364d388ba8737f0db1e23 66 Gene3D G3DSA:3.10.20.30 1 66 1.3E-25 T 21-04-2016 IPR012675 Beta-grasp domain SDY_3735 82849d8878d364d388ba8737f0db1e23 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 8.6E-22 T 21-04-2016 IPR010035 ThiS, thiamine-biosynthesis SDY_3735 82849d8878d364d388ba8737f0db1e23 66 Pfam PF02597 ThiS family 3 66 2.2E-18 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SDY_3735 82849d8878d364d388ba8737f0db1e23 66 PANTHER PTHR34472 1 66 4.3E-26 T 21-04-2016 SDY_3735 82849d8878d364d388ba8737f0db1e23 66 SUPERFAMILY SSF54285 1 66 2.18E-19 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SDY_3735 82849d8878d364d388ba8737f0db1e23 66 PANTHER PTHR34472:SF1 1 66 4.3E-26 T 21-04-2016 SDY_1489 816e9970718b46881dc5505e96547938 137 PANTHER PTHR10173 6 134 1.5E-61 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SDY_1489 816e9970718b46881dc5505e96547938 137 SUPERFAMILY SSF51316 5 133 1.15E-58 T 21-04-2016 IPR011057 Mss4-like SDY_1489 816e9970718b46881dc5505e96547938 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.248 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SDY_1489 816e9970718b46881dc5505e96547938 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 4.7E-67 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SDY_1489 816e9970718b46881dc5505e96547938 137 Gene3D G3DSA:2.170.150.20 4 133 8.6E-61 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SDY_1489 816e9970718b46881dc5505e96547938 137 Pfam PF01641 SelR domain 9 127 7.4E-54 T 21-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SDY_1489 816e9970718b46881dc5505e96547938 137 PANTHER PTHR10173:SF18 6 134 1.5E-61 T 21-04-2016 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF54211 324 515 4.86E-46 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 PANTHER PTHR11252 25 714 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SMART SM00322 575 640 1.2E-12 T 21-04-2016 IPR004087 K Homology domain GO:0003676 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF55666 473 571 1.82E-27 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Gene3D G3DSA:2.40.50.140 642 717 8.8E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF03725 3' exoribonuclease family, domain 2 170 233 2.9E-14 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF03725 3' exoribonuclease family, domain 2 483 550 1.7E-4 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF55666 168 258 2.1E-31 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF00575 S1 RNA binding domain 642 713 5.7E-23 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Gene3D G3DSA:3.30.1370.10 575 641 1.2E-26 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SMART SM00316 643 713 1.7E-27 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 33 714 0.0 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Gene3D G3DSA:1.10.10.400 249 336 1.2E-25 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 264 343 4.2E-26 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF54211 21 167 1.06E-50 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF00013 KH domain 580 637 4.8E-9 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF54791 577 662 3.45E-23 T 21-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF01138 3' exoribonuclease family, domain 1 347 479 3.2E-20 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Pfam PF01138 3' exoribonuclease family, domain 1 39 167 9.6E-19 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 26 716 30.561 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 PIRSF PIRSF005499 25 733 8.1E-301 T 21-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF46915 249 348 1.2E-25 T 21-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 SUPERFAMILY SSF50249 643 720 2.61E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Gene3D G3DSA:3.30.230.70 23 248 1.1E-84 T 21-04-2016 IPR027408 PNPase/RNase PH domain SDY_3343 153cceb9a0016c53b3aa3d2f66461a29 734 Gene3D G3DSA:3.30.230.70 337 565 1.5E-87 T 21-04-2016 IPR027408 PNPase/RNase PH domain SDY_3634 601781f5805636bba90793b8292f5271 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 3.2E-106 T 21-04-2016 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 SDY_3634 601781f5805636bba90793b8292f5271 254 SMART SM00382 28 218 1.5E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3634 601781f5805636bba90793b8292f5271 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3634 601781f5805636bba90793b8292f5271 254 SUPERFAMILY SSF52540 16 241 1.67E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3634 601781f5805636bba90793b8292f5271 254 PANTHER PTHR24220 4 243 1.6E-87 T 21-04-2016 SDY_3634 601781f5805636bba90793b8292f5271 254 Gene3D G3DSA:3.40.50.300 5 242 2.5E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3634 601781f5805636bba90793b8292f5271 254 PANTHER PTHR24220:SF574 4 243 1.6E-87 T 21-04-2016 SDY_3634 601781f5805636bba90793b8292f5271 254 Pfam PF00005 ABC transporter 20 168 3.4E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 Gene3D G3DSA:1.10.10.10 2 75 2.4E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 SUPERFAMILY SSF53850 82 289 5.43E-46 T 21-04-2016 SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 Pfam PF03466 LysR substrate binding domain 81 284 2.4E-43 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 54 1.2E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 SUPERFAMILY SSF46785 2 76 9.99E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 PANTHER PTHR30537:SF11 1 291 7.6E-189 T 21-04-2016 SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 PANTHER PTHR30537 1 291 7.6E-189 T 21-04-2016 SDY_4541 b8efb8204f8dfabba526a3261025e6cb 291 Gene3D G3DSA:3.40.190.10 84 183 5.6E-28 T 21-04-2016 SDY_0502 c45b64804077844cbc16ffb14d229da4 283 SUPERFAMILY SSF51197 5 281 6.87E-98 T 21-04-2016 SDY_0502 c45b64804077844cbc16ffb14d229da4 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 3.9E-66 T 21-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 SDY_0502 c45b64804077844cbc16ffb14d229da4 283 PANTHER PTHR30468:SF2 1 283 1.1E-104 T 21-04-2016 SDY_0502 c45b64804077844cbc16ffb14d229da4 283 PANTHER PTHR30468 1 283 1.1E-104 T 21-04-2016 SDY_0502 c45b64804077844cbc16ffb14d229da4 283 Gene3D G3DSA:3.60.130.10 2 281 3.7E-101 T 21-04-2016 SDY_4248 c6e59b8ea6b256416dbe21a3b1dd1d3d 309 PANTHER PTHR32196 11 309 6.5E-187 T 21-04-2016 SDY_4248 c6e59b8ea6b256416dbe21a3b1dd1d3d 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 308 1.1E-45 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_4248 c6e59b8ea6b256416dbe21a3b1dd1d3d 309 PANTHER PTHR32196:SF19 11 309 6.5E-187 T 21-04-2016 SDY_1580 34c4976e818e08007d19c1c51c97a4ba 131 PANTHER PTHR33293 6 126 2.8E-25 T 21-04-2016 SDY_1580 34c4976e818e08007d19c1c51c97a4ba 131 PANTHER PTHR33293:SF1 6 126 2.8E-25 T 21-04-2016 SDY_1580 34c4976e818e08007d19c1c51c97a4ba 131 Pfam PF03400 IS1 transposase 2 131 2.4E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0490 30a62fb1ab0ec296794b370922444982 415 SUPERFAMILY SSF82689 322 395 3.01E-6 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SDY_0490 30a62fb1ab0ec296794b370922444982 415 Pfam PF00924 Mechanosensitive ion channel 142 396 7.8E-72 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SDY_0490 30a62fb1ab0ec296794b370922444982 415 PANTHER PTHR30414 1 415 7.0E-221 T 21-04-2016 SDY_0490 30a62fb1ab0ec296794b370922444982 415 Gene3D G3DSA:3.30.70.100 323 389 9.8E-4 T 21-04-2016 SDY_0490 30a62fb1ab0ec296794b370922444982 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 21-04-2016 IPR010920 LSM domain SDY_0490 30a62fb1ab0ec296794b370922444982 415 PANTHER PTHR30414:SF0 1 415 7.0E-221 T 21-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 SDY_0490 30a62fb1ab0ec296794b370922444982 415 Gene3D G3DSA:2.30.30.60 203 252 9.1E-9 T 21-04-2016 SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.4E-23 T 21-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 PANTHER PTHR11527:SF122 1 137 4.8E-46 T 21-04-2016 SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 51.246 T 21-04-2016 IPR023728 Small heat shock protein IbpA SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 PANTHER PTHR11527 1 137 4.8E-46 T 21-04-2016 IPR031107 Small heat shock protein HSP20 SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Gene3D G3DSA:2.60.40.790 4 137 3.9E-18 T 21-04-2016 IPR008978 HSP20-like chaperone SDY_4173 6bb27f9960fa9182d82beeeeb4bc8a5c 137 SUPERFAMILY SSF49764 30 137 4.88E-20 T 21-04-2016 IPR008978 HSP20-like chaperone SDY_3168 98822156c91c8e151fc394de8e11cfce 219 PANTHER PTHR11934 1 219 1.9E-150 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.72 T 21-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.5E-72 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 PANTHER PTHR11934:SF11 1 219 1.9E-150 T 21-04-2016 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.30.70.260 137 196 1.3E-30 T 21-04-2016 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF75445 127 198 2.75E-24 T 21-04-2016 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF100950 2 146 1.86E-46 T 21-04-2016 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 8.9E-59 T 21-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3168 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.40.50.1360 1 136 1.7E-58 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 4.4E-18 T 21-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 7.4E-158 T 21-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 SMART SM00487 150 342 2.8E-21 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799:SF610 150 354 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799:SF610 399 694 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799:SF610 799 840 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799:SF610 887 963 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 73.82 T 21-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 SUPERFAMILY SSF52540 480 654 2.25E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 SUPERFAMILY SSF52540 273 337 2.25E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Pfam PF00271 Helicase conserved C-terminal domain 493 601 3.9E-16 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Gene3D G3DSA:3.40.50.300 154 320 2.1E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799 150 354 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799 399 694 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799 799 840 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 PANTHER PTHR10799 887 963 4.3E-269 T 21-04-2016 SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 SMART SM00490 517 601 1.7E-19 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 Gene3D G3DSA:3.40.50.300 483 627 3.7E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0083 7e4c69d85bdbc2868185f46daa3e674e 968 SUPERFAMILY SSF52540 141 367 9.69E-38 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.10.8.60 154 228 1.6E-8 T 21-04-2016 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.10.3710.10 348 444 2.2E-34 T 21-04-2016 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 PANTHER PTHR13779:SF7 11 447 2.9E-201 T 21-04-2016 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.20.272.10 249 347 3.1E-42 T 21-04-2016 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:3.40.50.300 11 153 1.0E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 4.7E-17 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 SUPERFAMILY SSF48019 252 434 6.23E-71 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 SUPERFAMILY SSF52540 6 234 1.53E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 SMART SM00382 49 165 2.6E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 PANTHER PTHR13779 11 447 2.9E-201 T 21-04-2016 SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 3.1E-64 T 21-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SDY_2369 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF16193 AAA C-terminal domain 188 267 5.5E-22 T 21-04-2016 IPR032423 AAA ATPase, C-terminal domain SDY_3028 538145cfeadc638efaba5b1229249683 401 Gene3D G3DSA:3.90.1150.10 281 393 6.5E-19 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3028 538145cfeadc638efaba5b1229249683 401 PANTHER PTHR11601 1 401 0.0 T 21-04-2016 SDY_3028 538145cfeadc638efaba5b1229249683 401 Pfam PF00266 Aminotransferase class-V 21 388 2.2E-141 T 21-04-2016 IPR000192 Aminotransferase class V domain SDY_3028 538145cfeadc638efaba5b1229249683 401 PANTHER PTHR11601:SF44 1 401 0.0 T 21-04-2016 SDY_3028 538145cfeadc638efaba5b1229249683 401 SUPERFAMILY SSF53383 5 397 4.52E-110 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3028 538145cfeadc638efaba5b1229249683 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 2.2E-231 T 21-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SDY_3028 538145cfeadc638efaba5b1229249683 401 Gene3D G3DSA:3.40.640.10 32 280 6.1E-78 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3028 538145cfeadc638efaba5b1229249683 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SDY_3238 8969f529e9e91b6a549d289bf2414fe7 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.2E-52 T 21-04-2016 IPR016476 SH3 domain protein SDY_3238 8969f529e9e91b6a549d289bf2414fe7 206 SMART SM00287 23 89 8.2E-16 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type SDY_3238 8969f529e9e91b6a549d289bf2414fe7 206 PIRSF PIRSF006158 1 205 2.4E-72 T 21-04-2016 IPR016476 SH3 domain protein SDY_3238 8969f529e9e91b6a549d289bf2414fe7 206 Pfam PF08239 Bacterial SH3 domain 35 85 3.6E-9 T 21-04-2016 IPR003646 SH3-like domain, bacterial-type SDY_4347 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.84E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_4347 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.84E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_4347 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.84E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_4347 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4347 40785a8282413070fe126dfd41e458ff 70 PANTHER PTHR11544:SF65 1 70 2.3E-46 T 21-04-2016 SDY_4347 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_4347 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 5 68 3.2E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4347 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 21-04-2016 IPR019844 Cold-shock conserved site SDY_4347 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.6E-33 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_4347 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 1.1E-25 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 SDY_4347 40785a8282413070fe126dfd41e458ff 70 PANTHER PTHR11544 1 70 2.3E-46 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 187 653 2.8E-264 T 21-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Pfam PF13247 4Fe-4S dicluster domain 55 144 3.2E-9 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 SUPERFAMILY SSF51971 327 582 8.24E-68 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Gene3D G3DSA:3.40.50.720 331 572 1.3E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 SUPERFAMILY SSF54862 196 293 4.6E-43 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 SUPERFAMILY SSF54862 1 161 4.6E-43 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 3.7E-38 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PRINTS PR00419 Adrenodoxin reductase family signature 505 518 3.7E-38 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PRINTS PR00419 Adrenodoxin reductase family signature 471 485 3.7E-38 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 3.7E-38 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 3.7E-38 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PANTHER PTHR11938 1 106 0.0 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PANTHER PTHR11938 281 657 0.0 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 205 315 5.8E-37 T 21-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Gene3D G3DSA:1.10.1060.10 185 330 1.1E-44 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PANTHER PTHR11938:SF89 1 106 0.0 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 PANTHER PTHR11938:SF89 281 657 0.0 T 21-04-2016 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 328 640 2.8E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Gene3D G3DSA:3.40.50.720 573 649 1.8E-10 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2651 ab41a73b9eda03bb327b82f0181cd43d 659 Gene3D G3DSA:3.30.70.20 5 174 7.2E-25 T 21-04-2016 SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 Gene3D G3DSA:3.40.50.720 3 246 1.6E-76 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PANTHER PTHR24322:SF402 7 137 2.0E-91 T 21-04-2016 SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PANTHER PTHR24322:SF402 153 189 2.0E-91 T 21-04-2016 SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 6.7E-60 T 21-04-2016 SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-12 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-12 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.2E-12 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.2E-38 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 SUPERFAMILY SSF51735 3 245 1.52E-75 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PANTHER PTHR24322 7 137 2.0E-91 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2151 a7d82436f9d95605a8ec6b1147b37e6b 253 PANTHER PTHR24322 153 189 2.0E-91 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 PANTHER PTHR21600 1 231 1.9E-76 T 21-04-2016 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 SMART SM00363 1 60 4.2E-11 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 9.7E-18 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 SUPERFAMILY SSF55174 1 55 1.62E-12 T 21-04-2016 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 PANTHER PTHR21600:SF19 1 231 1.9E-76 T 21-04-2016 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 2.4E-60 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 Gene3D G3DSA:3.10.290.10 1 64 2.1E-22 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 Pfam PF01479 S4 domain 1 45 2.9E-9 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_0896 c80e14795df1d9fe3fea6a32b63ba036 231 SUPERFAMILY SSF55120 61 227 2.34E-47 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 Gene3D G3DSA:3.40.50.150 6 198 2.8E-66 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 Gene3D G3DSA:1.10.8.100 201 266 1.5E-25 T 21-04-2016 IPR023165 rRNA adenine dimethylase-like SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.226 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 PANTHER PTHR11727 1 267 1.3E-97 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 2.3E-89 T 21-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 SMART SM00650 25 198 7.0E-84 T 21-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 2.0E-88 T 21-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 SUPERFAMILY SSF53335 17 266 4.23E-76 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0076 80437af9a0adbefa37178e4bc7f29f37 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 21-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 9.4E-81 T 21-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Gene3D G3DSA:3.20.14.10 341 590 3.2E-131 T 21-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Gene3D G3DSA:3.40.275.10 176 340 3.6E-79 T 21-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 2.3E-80 T 21-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 21-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 71.335 T 21-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 PANTHER PTHR37840 1 590 1.2E-251 T 21-04-2016 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 SUPERFAMILY SSF50443 356 590 6.54E-128 T 21-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Gene3D G3DSA:3.40.50.1070 4 175 3.1E-95 T 21-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 SUPERFAMILY SSF53743 2 355 4.45E-152 T 21-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 PANTHER PTHR37840:SF1 1 590 1.2E-251 T 21-04-2016 SDY_3020 65399b5286ec24481d8efe4a90f21fad 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 4.7E-54 T 21-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 SDY_4362 59cb4c4a73e474c87a0bda2142a771c7 465 PANTHER PTHR33843:SF5 2 461 0.0 T 21-04-2016 SDY_4362 59cb4c4a73e474c87a0bda2142a771c7 465 Pfam PF03611 PTS system sugar-specific permease component 15 410 9.9E-123 T 21-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SDY_4362 59cb4c4a73e474c87a0bda2142a771c7 465 PANTHER PTHR33843 2 461 0.0 T 21-04-2016 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 PANTHER PTHR21363 88 371 1.0E-83 T 21-04-2016 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 PIRSF PIRSF001499 1 373 1.6E-185 T 21-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 Gene3D G3DSA:1.20.59.10 3 83 4.3E-21 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 SMART SM00830 9 89 1.1E-28 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 Pfam PF01817 Chorismate mutase type II 9 86 3.1E-18 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 Gene3D G3DSA:1.10.3660.10 248 372 1.6E-58 T 21-04-2016 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 SUPERFAMILY SSF48179 241 366 2.04E-42 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 Pfam PF02153 Prephenate dehydrogenase 136 344 1.9E-31 T 21-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 Gene3D G3DSA:3.40.50.720 84 247 3.7E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 SUPERFAMILY SSF48600 4 88 2.38E-22 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.2E-44 T 21-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 SUPERFAMILY SSF51735 91 238 3.19E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2766 bef3f877a01263ef4dc9baf9038afe97 373 PANTHER PTHR21363:SF0 88 371 1.0E-83 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376:SF32 570 943 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.4E-77 T 21-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.44 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.24 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 21-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376:SF32 1177 1262 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376:SF32 961 1157 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 SUPERFAMILY SSF64484 16 944 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376 961 1157 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376 1303 1395 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 21-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.1E-90 T 21-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376:SF32 1303 1395 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Gene3D G3DSA:2.40.50.100 1156 1211 5.1E-6 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 21-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.8E-27 T 21-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376 1177 1262 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376 570 943 0.0 T 21-04-2016 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 SMART SM00663 235 514 1.1E-184 T 21-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3740 bfb1c9a576b0bc296c261fa0608a60be 1407 PANTHER PTHR19376 4 551 0.0 T 21-04-2016 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 PANTHER PTHR33055:SF3 10 209 3.4E-78 T 21-04-2016 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 PANTHER PTHR33055:SF3 257 393 3.4E-78 T 21-04-2016 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 Pfam PF01548 Transposase 14 168 4.3E-43 T 21-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 3.0E-22 T 21-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 PANTHER PTHR33055 10 209 3.4E-78 T 21-04-2016 SDY_1376 bde974b4b8652060c8458a1062da69c5 398 PANTHER PTHR33055 257 393 3.4E-78 T 21-04-2016 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 PANTHER PTHR30363 2 252 7.5E-176 T 21-04-2016 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 Gene3D G3DSA:1.10.10.10 3 43 1.1E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 SMART SM01134 73 234 8.4E-55 T 21-04-2016 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 Gene3D G3DSA:3.40.50.1360 77 215 1.0E-8 T 21-04-2016 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 9.7E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 SMART SM00420 8 57 7.0E-15 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.0E-44 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 PANTHER PTHR30363:SF8 2 252 7.5E-176 T 21-04-2016 SDY_0842 f5d09f84fbc2532dce7e0217efe8347f 252 SUPERFAMILY SSF100950 74 236 1.78E-30 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 PANTHER PTHR11938 1 101 8.9E-40 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 Gene3D G3DSA:3.30.70.20 56 86 1.0E-13 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 PANTHER PTHR11938:SF111 133 164 8.9E-40 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2921 f52479c774444c1821d6899b2e8c706d 203 Gene3D G3DSA:3.30.70.20 5 55 5.1E-23 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 Gene3D G3DSA:3.30.70.20 156 189 5.1E-23 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 PANTHER PTHR11938 133 164 8.9E-40 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 SUPERFAMILY SSF54862 136 182 9.94E-42 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 SUPERFAMILY SSF54862 2 101 9.94E-42 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 Pfam PF13247 4Fe-4S dicluster domain 47 97 2.0E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2921 f52479c774444c1821d6899b2e8c706d 203 Gene3D G3DSA:3.30.70.20 87 155 9.3E-10 T 21-04-2016 SDY_2921 f52479c774444c1821d6899b2e8c706d 203 PANTHER PTHR11938:SF111 1 101 8.9E-40 T 21-04-2016 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 1.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 1.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 1.6E-20 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 299 5.2E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PANTHER PTHR24423 92 170 1.8E-96 T 21-04-2016 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PANTHER PTHR24423 221 457 1.8E-96 T 21-04-2016 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 SUPERFAMILY SSF55874 293 449 2.23E-44 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3723 f015dd3507de36a7289977b86d48fef2 458 SUPERFAMILY SSF47384 224 300 2.94E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 449 2.0E-24 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PANTHER PTHR24423:SF445 92 170 1.8E-96 T 21-04-2016 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 PANTHER PTHR24423:SF445 221 457 1.8E-96 T 21-04-2016 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 SMART SM00387 345 451 7.5E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3723 f015dd3507de36a7289977b86d48fef2 458 Gene3D G3DSA:3.30.565.10 303 449 4.3E-47 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3723 f015dd3507de36a7289977b86d48fef2 458 SMART SM00388 237 303 1.6E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3723 f015dd3507de36a7289977b86d48fef2 458 SUPERFAMILY SSF103190 34 155 2.12E-13 T 21-04-2016 IPR029151 Periplasmic sensor domain-like SDY_3723 f015dd3507de36a7289977b86d48fef2 458 Gene3D G3DSA:1.10.287.130 231 298 2.6E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 178 4.9E-47 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 SUPERFAMILY SSF52467 165 339 8.59E-37 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 6 559 0.0 T 21-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 PANTHER PTHR18968 1 551 3.7E-203 T 21-04-2016 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Gene3D G3DSA:3.40.50.1220 195 337 1.2E-40 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 SUPERFAMILY SSF52518 369 547 1.02E-39 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 PANTHER PTHR18968:SF6 1 551 3.7E-203 T 21-04-2016 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Gene3D G3DSA:3.40.50.970 362 549 2.1E-51 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 327 1.2E-32 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 SUPERFAMILY SSF52518 7 184 8.1E-48 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Gene3D G3DSA:3.40.50.970 8 180 1.5E-50 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2571 f9ef3a1387be7d12ea13b8c6a8daa32a 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 540 1.4E-24 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_2439 24a39f6dabca60b49932328d30d2f6d4 308 PANTHER PTHR34611:SF1 2 308 3.6E-248 T 21-04-2016 SDY_2439 24a39f6dabca60b49932328d30d2f6d4 308 Pfam PF04754 Putative transposase, YhgA-like 8 209 2.9E-85 T 21-04-2016 IPR006842 Transposase (putative), YhgA-like SDY_2439 24a39f6dabca60b49932328d30d2f6d4 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 304 1.9E-51 T 21-04-2016 IPR010106 Conserved hypothetical protein CHP01784 SDY_2439 24a39f6dabca60b49932328d30d2f6d4 308 PANTHER PTHR34611 2 308 3.6E-248 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 PANTHER PTHR11911 35 321 3.5E-110 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.6E-135 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 PANTHER PTHR11911:SF98 35 321 3.5E-110 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 SUPERFAMILY SSF54631 260 317 3.88E-8 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 SUPERFAMILY SSF53697 10 255 2.67E-54 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 PIRSF PIRSF004692 1 321 1.4E-122 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 Gene3D G3DSA:3.40.50.10490 22 192 1.3E-40 T 21-04-2016 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 Pfam PF01380 SIS domain 39 169 1.6E-29 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 Pfam PF00571 CBS domain 282 315 5.5E-4 T 21-04-2016 IPR000644 CBS domain SDY_2905 07e076877e15eb6fbf8a6efb9903dd1d 321 Gene3D G3DSA:3.10.580.10 193 317 3.9E-30 T 21-04-2016 SDY_0436 e9ea5f3a2ed919feede9fa4b93363578 264 PANTHER PTHR40590 1 264 8.4E-121 T 21-04-2016 SDY_0436 e9ea5f3a2ed919feede9fa4b93363578 264 Pfam PF01963 TraB family 30 264 1.4E-40 T 21-04-2016 IPR002816 Pheromone shutdown, TraB SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 SUPERFAMILY SSF47240 10 167 5.13E-50 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PIRSF PIRSF005900 8 167 2.3E-43 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 21-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PANTHER PTHR30295:SF4 9 167 4.7E-98 T 21-04-2016 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PANTHER PTHR30295 9 167 4.7E-98 T 21-04-2016 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 Gene3D G3DSA:1.20.1260.10 2 167 1.4E-53 T 21-04-2016 IPR012347 Ferritin-related SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.9E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.9E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.9E-13 T 21-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 21-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 Pfam PF00210 Ferritin-like domain 31 166 5.5E-22 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SDY_0783 36aa46c3c11c46dd41f216524ccbb299 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 50.452 T 21-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 PANTHER PTHR30055:SF53 6 174 1.2E-76 T 21-04-2016 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 TIGRFAM TIGR03613 RutR: pyrimidine utilization regulatory protein R 11 212 1.8E-116 T 21-04-2016 IPR019915 Transcription regulator, pyrimidine utilisation, RutR SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 Gene3D G3DSA:1.10.10.60 53 78 7.4E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 6.2E-15 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 SUPERFAMILY SSF48498 87 212 6.47E-42 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 PANTHER PTHR30055 6 174 1.2E-76 T 21-04-2016 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 212 5.7E-59 T 21-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 SUPERFAMILY SSF46689 12 90 1.2E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 Gene3D G3DSA:1.10.357.10 79 212 1.8E-59 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_0988 8729f1ddd4465abbf2a1258fe1a1b8c1 212 Gene3D G3DSA:1.10.10.60 10 52 2.2E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 PANTHER PTHR30532 19 319 8.5E-161 T 21-04-2016 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 Gene3D G3DSA:3.40.50.1980 29 157 2.5E-25 T 21-04-2016 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 Pfam PF01497 Periplasmic binding protein 49 297 3.0E-32 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 Gene3D G3DSA:3.40.50.1980 158 319 1.3E-45 T 21-04-2016 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 SUPERFAMILY SSF53807 31 312 7.46E-50 T 21-04-2016 SDY_0523 1911b31e5f39e2fad046f8062bffb4e4 321 PANTHER PTHR30532:SF2 19 319 8.5E-161 T 21-04-2016 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 1.4E-71 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.3E-58 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.1E-41 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.1E-41 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.1E-41 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.1E-41 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PANTHER PTHR36918 6 155 3.6E-92 T 21-04-2016 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 PANTHER PTHR36918:SF1 6 155 3.6E-92 T 21-04-2016 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 SUPERFAMILY SSF54611 10 142 1.2E-53 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 Gene3D G3DSA:3.10.420.10 2 151 3.6E-65 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_4042 82d218d455a27c5acdf11662265cd47e 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.552 T 21-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SDY_3209 ef0dad65ad91b11ac442e559dda68e16 193 Gene3D G3DSA:3.40.50.1820 3 185 2.0E-16 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3209 ef0dad65ad91b11ac442e559dda68e16 193 PANTHER PTHR35602:SF3 1 193 8.6E-130 T 21-04-2016 SDY_3209 ef0dad65ad91b11ac442e559dda68e16 193 PANTHER PTHR35602 1 193 8.6E-130 T 21-04-2016 SDY_3209 ef0dad65ad91b11ac442e559dda68e16 193 SUPERFAMILY SSF53474 3 188 2.66E-21 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3209 ef0dad65ad91b11ac442e559dda68e16 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.9E-74 T 21-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SDY_4237 df33d11f50f56f233f8525400c86dacb 239 SMART SM00448 2 117 8.0E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 PANTHER PTHR26402 2 188 1.8E-74 T 21-04-2016 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 Gene3D G3DSA:1.10.10.60 160 192 4.1E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-24 T 21-04-2016 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 SUPERFAMILY SSF52172 1 136 6.12E-29 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4237 df33d11f50f56f233f8525400c86dacb 239 PIRSF PIRSF006171 1 230 4.1E-83 T 21-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 Pfam PF00072 Response regulator receiver domain 4 117 1.2E-19 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4237 df33d11f50f56f233f8525400c86dacb 239 PANTHER PTHR26402:SF522 2 188 1.8E-74 T 21-04-2016 SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 PANTHER PTHR22789:SF8 1 231 9.5E-160 T 21-04-2016 SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 PANTHER PTHR22789 1 231 9.5E-160 T 21-04-2016 SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 Gene3D G3DSA:3.40.225.10 2 231 2.8E-75 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 SUPERFAMILY SSF53639 1 223 7.65E-72 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 72.146 T 21-04-2016 SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.7E-48 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 2.2E-135 T 21-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 SDY_0088 53a42b31eb1f4b4af009f00b64cbb21a 231 SMART SM01007 7 198 1.3E-70 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_1652 8abbc419149cf37a5a9d4104395bdea9 231 SUPERFAMILY SSF89155 2 156 2.09E-25 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1652 8abbc419149cf37a5a9d4104395bdea9 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 1.9E-33 T 21-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 SDY_1652 8abbc419149cf37a5a9d4104395bdea9 231 PANTHER PTHR30598 1 209 1.2E-162 T 21-04-2016 SDY_1652 8abbc419149cf37a5a9d4104395bdea9 231 PANTHER PTHR30598:SF5 1 209 1.2E-162 T 21-04-2016 SDY_1652 8abbc419149cf37a5a9d4104395bdea9 231 Pfam PF02613 Nitrate reductase delta subunit 36 151 1.2E-10 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_3631 63ae185b6754a443203c381b08e95da5 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 433 4.3E-91 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_3631 63ae185b6754a443203c381b08e95da5 524 SUPERFAMILY SSF53850 27 517 2.17E-126 T 21-04-2016 SDY_3631 63ae185b6754a443203c381b08e95da5 524 PANTHER PTHR30290 22 509 5.3E-142 T 21-04-2016 SDY_3631 63ae185b6754a443203c381b08e95da5 524 Gene3D G3DSA:3.10.105.10 282 490 9.9E-47 T 21-04-2016 SDY_3631 63ae185b6754a443203c381b08e95da5 524 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_3631 63ae185b6754a443203c381b08e95da5 524 PIRSF PIRSF002741 20 520 2.6E-88 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_3631 63ae185b6754a443203c381b08e95da5 524 PANTHER PTHR30290:SF9 22 509 5.3E-142 T 21-04-2016 SDY_3631 63ae185b6754a443203c381b08e95da5 524 Gene3D G3DSA:3.40.190.10 128 281 1.1E-39 T 21-04-2016 SDY_3631 63ae185b6754a443203c381b08e95da5 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 520 2.7E-251 T 21-04-2016 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 PANTHER PTHR21000:SF11 1 371 0.0 T 21-04-2016 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 PANTHER PTHR21000:SF11 406 616 0.0 T 21-04-2016 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.6E-272 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 SUPERFAMILY SSF52016 421 610 1.41E-59 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.289 T 21-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 21-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 SUPERFAMILY SSF143975 3 420 1.44E-134 T 21-04-2016 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 PANTHER PTHR21000 1 371 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 PANTHER PTHR21000 406 616 0.0 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3977 a658e2ba7d2de640c6f3de9204087d78 616 Pfam PF00920 Dehydratase family 34 607 1.4E-217 T 21-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_1310 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1310 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1310 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1310 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_3698 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3698 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3698 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3698 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1163 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1163 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1163 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1163 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_3289 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3289 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3289 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3289 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_2229 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2229 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2229 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2229 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1449 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1449 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1449 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1449 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1646 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1646 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1646 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1646 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_4584 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4584 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4584 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4584 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0349 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0349 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0349 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0349 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1020 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1020 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1020 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1020 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_2980 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2980 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2980 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2980 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_4572 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4572 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4572 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4572 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_2701 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2701 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2701 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2701 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_4207 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4207 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4207 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4207 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0510 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0510 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0510 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0510 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_2169 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2169 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2169 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2169 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0463 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0463 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0463 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0463 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0730 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0730 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0730 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0730 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1079 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1079 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1079 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1079 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1795 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1795 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1795 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1795 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0819 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0819 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0819 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0819 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_0496 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0496 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0496 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0496 2766fdd4e9e285df2a70f8c10f901f65 121 PANTHER PTHR37936 1 121 3.3E-48 T 21-04-2016 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 Gene3D G3DSA:3.40.50.1100 177 392 3.1E-93 T 21-04-2016 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.278 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 SUPERFAMILY SSF53686 5 390 5.5E-142 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 PANTHER PTHR10314:SF3 7 396 4.1E-225 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 Gene3D G3DSA:3.40.50.1100 97 176 6.8E-21 T 21-04-2016 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 9.0E-189 T 21-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 PIRSF PIRSF001413 1 397 1.4E-172 T 21-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 375 7.6E-51 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 21-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1329 51c86a0c230d4dc1f80d073d74215a64 397 PANTHER PTHR10314 7 396 4.1E-225 T 21-04-2016 SDY_1971 53709609f2c71f4eb12e52e6acf54588 131 PANTHER PTHR33293:SF1 6 126 1.5E-24 T 21-04-2016 SDY_1971 53709609f2c71f4eb12e52e6acf54588 131 PANTHER PTHR33293 6 126 1.5E-24 T 21-04-2016 SDY_1971 53709609f2c71f4eb12e52e6acf54588 131 Pfam PF03400 IS1 transposase 2 131 2.2E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 Pfam PF03466 LysR substrate binding domain 65 192 5.6E-10 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 PANTHER PTHR30118:SF10 238 311 6.4E-195 T 21-04-2016 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 Gene3D G3DSA:3.40.190.10 67 197 2.5E-12 T 21-04-2016 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 SUPERFAMILY SSF46785 2 57 1.63E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 37 9.2E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 PANTHER PTHR30118 1 192 6.4E-195 T 21-04-2016 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 PANTHER PTHR30118 238 311 6.4E-195 T 21-04-2016 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 Gene3D G3DSA:1.10.10.10 2 55 1.9E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 PANTHER PTHR30118:SF10 1 192 6.4E-195 T 21-04-2016 SDY_0551 b2b15a68e3b47ba3eb7b9da5aafdb955 311 SUPERFAMILY SSF53850 65 193 4.34E-11 T 21-04-2016 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 PANTHER PTHR21666:SF224 176 360 2.2E-55 T 21-04-2016 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 2 359 66.859 T 21-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 Gene3D G3DSA:1.10.530.10 188 359 3.3E-41 T 21-04-2016 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 PANTHER PTHR21666 176 360 2.2E-55 T 21-04-2016 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 Pfam PF01464 Transglycosylase SLT domain 197 320 1.3E-32 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 SUPERFAMILY SSF53955 192 358 1.24E-36 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 Pfam PF11873 Domain of unknown function (DUF3393) 4 192 1.9E-76 T 21-04-2016 IPR024570 Murein transglycosylase-C, N-terminal SDY_3109 42eaad2a46a6f284f5ce8cb3c39de2d0 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 58 77 7.2E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 47 7.2E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 47 58 7.2E-10 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 PANTHER PTHR30154 23 181 2.0E-106 T 21-04-2016 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 ProSitePatterns PS00519 AsnC-type HTH domain signature. 49 75 - T 21-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 SUPERFAMILY SSF46785 30 90 3.29E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 Pfam PF13412 Winged helix-turn-helix DNA-binding 31 77 7.8E-16 T 21-04-2016 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 Gene3D G3DSA:3.30.70.920 84 168 1.2E-30 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 Pfam PF01037 Lrp/AsnC ligand binding domain 97 171 1.1E-21 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 PANTHER PTHR30154:SF17 23 181 2.0E-106 T 21-04-2016 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 SMART SM00344 31 140 7.0E-36 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 SUPERFAMILY SSF54909 91 180 1.17E-20 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_0384 b1f87ebfc3752aac85964b5270d8572b 181 Gene3D G3DSA:1.10.10.10 32 83 4.4E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 PANTHER PTHR38100 2 209 8.5E-104 T 21-04-2016 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 PANTHER PTHR38100:SF1 2 209 8.5E-104 T 21-04-2016 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 Gene3D G3DSA:1.10.3890.10 2 209 5.1E-89 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 2.2E-75 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.567 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 9.0E-110 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 SDY_2020 4e6e1f2c92b74c80f3c96875aaa8c43f 213 SUPERFAMILY SSF101322 2 210 1.96E-82 T 21-04-2016 IPR007451 Uncharacterised protein family UPF0274 SDY_1340 08485320b5396b28cc9d7c332356f86c 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.7E-6 T 21-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_1340 08485320b5396b28cc9d7c332356f86c 196 Gene3D G3DSA:3.40.50.300 3 196 4.9E-78 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1340 08485320b5396b28cc9d7c332356f86c 196 SUPERFAMILY SSF52540 7 196 2.06E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1340 08485320b5396b28cc9d7c332356f86c 196 PIRSF PIRSF015617 1 196 3.2E-70 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_1340 08485320b5396b28cc9d7c332356f86c 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 4.9E-61 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_1340 08485320b5396b28cc9d7c332356f86c 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 3.8E-85 T 21-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_1340 08485320b5396b28cc9d7c332356f86c 196 PANTHER PTHR30069 5 196 6.0E-72 T 21-04-2016 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 SUPERFAMILY SSF53732 2 464 1.14E-167 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.774 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 Gene3D G3DSA:3.30.499.10 335 465 2.9E-63 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 Gene3D G3DSA:3.40.1060.10 166 279 9.9E-40 T 21-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PANTHER PTHR11670:SF38 1 307 1.3E-276 T 21-04-2016 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PANTHER PTHR11670:SF38 327 466 1.3E-276 T 21-04-2016 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.7E-283 T 21-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 9.3E-156 T 21-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 Gene3D G3DSA:3.30.499.10 2 158 1.5E-23 T 21-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 21-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PANTHER PTHR11670 1 307 1.3E-276 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0099 0e738a2b591d6174e84facf4e36ec194 466 PANTHER PTHR11670 327 466 1.3E-276 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 SUPERFAMILY SSF89155 5 163 3.4E-32 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 Gene3D G3DSA:1.10.3480.10 10 134 1.1E-7 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 1.7E-62 T 21-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 PANTHER PTHR30598:SF1 1 216 1.5E-94 T 21-04-2016 SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 Pfam PF02613 Nitrate reductase delta subunit 51 156 1.4E-12 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1281 e4667b9cd4f0c04e7a42a08c0f7944c9 236 PANTHER PTHR30598 1 216 1.5E-94 T 21-04-2016 SDY_0319 726e62e250bbd136faca4fd18d794103 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-60 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0319 726e62e250bbd136faca4fd18d794103 156 Gene3D G3DSA:3.40.50.960 2 152 3.0E-63 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0319 726e62e250bbd136faca4fd18d794103 156 SUPERFAMILY SSF52121 4 154 7.85E-59 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0319 726e62e250bbd136faca4fd18d794103 156 PANTHER PTHR21058 1 156 3.6E-77 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0319 726e62e250bbd136faca4fd18d794103 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.1E-54 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0319 726e62e250bbd136faca4fd18d794103 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.65 T 21-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 Gene3D G3DSA:3.40.50.720 2 256 3.5E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PANTHER PTHR24322 7 138 1.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PANTHER PTHR24322 154 186 1.6E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PANTHER PTHR24322:SF625 7 138 1.6E-48 T 21-04-2016 SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PANTHER PTHR24322:SF625 154 186 1.6E-48 T 21-04-2016 SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 Pfam PF00106 short chain dehydrogenase 3 197 1.5E-48 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.8E-19 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.8E-19 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.8E-19 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-19 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.8E-19 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2902 9e97efd3d0b0906c6c7b160e25b92b4c 259 SUPERFAMILY SSF51735 2 258 8.92E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0767 b5762385c877c910eec93657b7a518fc 181 SUPERFAMILY SSF47413 16 77 2.06E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0767 b5762385c877c910eec93657b7a518fc 181 Gene3D G3DSA:1.10.260.40 21 120 2.7E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0767 b5762385c877c910eec93657b7a518fc 181 SMART SM00530 22 75 0.0041 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1644 b118bf6490ee32e61643ee978e45ddcb 100 PANTHER PTHR33215 3 100 3.8E-19 T 21-04-2016 SDY_1644 b118bf6490ee32e61643ee978e45ddcb 100 Pfam PF01527 Transposase 3 74 4.1E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1644 b118bf6490ee32e61643ee978e45ddcb 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1644 b118bf6490ee32e61643ee978e45ddcb 100 SUPERFAMILY SSF46689 4 94 2.87E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0835 b118bf6490ee32e61643ee978e45ddcb 100 PANTHER PTHR33215 3 100 3.8E-19 T 21-04-2016 SDY_0835 b118bf6490ee32e61643ee978e45ddcb 100 Pfam PF01527 Transposase 3 74 4.1E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0835 b118bf6490ee32e61643ee978e45ddcb 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0835 b118bf6490ee32e61643ee978e45ddcb 100 SUPERFAMILY SSF46689 4 94 2.87E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1198 b118bf6490ee32e61643ee978e45ddcb 100 PANTHER PTHR33215 3 100 3.8E-19 T 21-04-2016 SDY_1198 b118bf6490ee32e61643ee978e45ddcb 100 Pfam PF01527 Transposase 3 74 4.1E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1198 b118bf6490ee32e61643ee978e45ddcb 100 Gene3D G3DSA:1.10.10.60 9 90 2.1E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1198 b118bf6490ee32e61643ee978e45ddcb 100 SUPERFAMILY SSF46689 4 94 2.87E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0567 0754593e315c348cebd3f7d40cdf821f 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 3.5E-53 T 21-04-2016 IPR009912 Zinc-ribbon containing domain SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PANTHER PTHR21060 2 398 3.1E-283 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 Gene3D G3DSA:3.30.420.40 208 398 7.4E-74 T 21-04-2016 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 7.6E-188 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 SUPERFAMILY SSF53067 160 398 6.02E-84 T 21-04-2016 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PANTHER PTHR21060:SF15 2 398 3.1E-283 T 21-04-2016 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.3E-48 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 Pfam PF00871 Acetokinase family 6 393 7.8E-178 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 Gene3D G3DSA:3.30.420.40 6 207 1.4E-9 T 21-04-2016 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 SUPERFAMILY SSF53067 4 199 3.63E-63 T 21-04-2016 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 PIRSF PIRSF000722 2 400 2.3E-143 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2492 8da1c424be915ba2d66173f93c278b31 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.777 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 SUPERFAMILY SSF75169 1 128 3.73E-38 T 21-04-2016 IPR027396 DsrEFH-like SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 Pfam PF02635 DsrE/DsrF-like family 1 128 3.5E-29 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 Gene3D G3DSA:3.40.1260.10 1 128 8.7E-31 T 21-04-2016 IPR027396 DsrEFH-like SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 3.4E-55 T 21-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 PANTHER PTHR34874 1 128 4.3E-67 T 21-04-2016 SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 PANTHER PTHR34874:SF1 1 128 4.3E-67 T 21-04-2016 SDY_3506 b3c0cdf6714551cc2135e45201928e41 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 41.342 T 21-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 SDY_2589 d715d4f6f73faffa9889173a371792b6 136 SUPERFAMILY SSF46689 24 118 4.48E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2589 d715d4f6f73faffa9889173a371792b6 136 Gene3D G3DSA:1.10.10.60 31 117 9.4E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2589 d715d4f6f73faffa9889173a371792b6 136 Pfam PF01527 Transposase 23 102 3.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2589 d715d4f6f73faffa9889173a371792b6 136 PANTHER PTHR37936 3 136 2.2E-47 T 21-04-2016 SDY_2350 d715d4f6f73faffa9889173a371792b6 136 SUPERFAMILY SSF46689 24 118 4.48E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2350 d715d4f6f73faffa9889173a371792b6 136 Gene3D G3DSA:1.10.10.60 31 117 9.4E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2350 d715d4f6f73faffa9889173a371792b6 136 Pfam PF01527 Transposase 23 102 3.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2350 d715d4f6f73faffa9889173a371792b6 136 PANTHER PTHR37936 3 136 2.2E-47 T 21-04-2016 SDY_2774 d715d4f6f73faffa9889173a371792b6 136 SUPERFAMILY SSF46689 24 118 4.48E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2774 d715d4f6f73faffa9889173a371792b6 136 Gene3D G3DSA:1.10.10.60 31 117 9.4E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2774 d715d4f6f73faffa9889173a371792b6 136 Pfam PF01527 Transposase 23 102 3.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2774 d715d4f6f73faffa9889173a371792b6 136 PANTHER PTHR37936 3 136 2.2E-47 T 21-04-2016 SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 SUPERFAMILY SSF53901 215 409 1.05E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 6.0E-28 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 SUPERFAMILY SSF53901 3 252 1.3E-55 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 Gene3D G3DSA:3.40.47.10 264 409 5.3E-47 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 PANTHER PTHR11712 3 409 2.4E-111 T 21-04-2016 SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 4.4E-42 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 SMART SM00825 Beta-ketoacyl synthase 5 408 3.3E-13 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SDY_3629 77822d3e80293c9599fbdb1450307e5b 409 Gene3D G3DSA:3.40.47.10 2 260 6.3E-56 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 3.9E-74 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 SUPERFAMILY SSF51182 1 375 1.32E-101 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PIRSF PIRSF001480 1 391 1.5E-113 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 1.8E-145 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 1.4E-123 T 21-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Gene3D G3DSA:2.60.120.10 238 273 4.4E-66 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Gene3D G3DSA:2.60.120.10 6 140 4.4E-66 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PANTHER PTHR10309:SF0 1 374 8.0E-144 T 21-04-2016 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Gene3D G3DSA:1.10.441.10 141 231 2.1E-24 T 21-04-2016 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Gene3D G3DSA:1.10.441.10 274 287 2.1E-24 T 21-04-2016 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 Gene3D G3DSA:2.60.120.10 288 376 8.6E-12 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 21-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 PANTHER PTHR10309 1 374 8.0E-144 T 21-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_1829 c4b3a033b1078e8e4d6326fe78bf1e36 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 21-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 SDY_4416 b8d19913308476e1ba5263e852123192 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.4E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.4E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.4E-10 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 SUPERFAMILY SSF52540 197 373 1.54E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4416 b8d19913308476e1ba5263e852123192 426 Gene3D G3DSA:3.40.50.300 198 361 7.1E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4416 b8d19913308476e1ba5263e852123192 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.6E-21 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 PANTHER PTHR10229 1 424 3.2E-181 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 21-04-2016 IPR025121 GTPase HflX, N-terminal SDY_4416 b8d19913308476e1ba5263e852123192 426 PIRSF PIRSF006809 3 419 7.3E-152 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 PANTHER PTHR10229:SF0 1 424 3.2E-181 T 21-04-2016 SDY_4416 b8d19913308476e1ba5263e852123192 426 SUPERFAMILY SSF54980 365 422 4.03E-14 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_4416 b8d19913308476e1ba5263e852123192 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-29 T 21-04-2016 IPR032305 GTP-binding protein, middle domain SDY_4416 b8d19913308476e1ba5263e852123192 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.3E-154 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 SDY_4416 b8d19913308476e1ba5263e852123192 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.396 T 21-04-2016 IPR016496 GTPase HflX GO:0005525 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 Gene3D G3DSA:2.40.160.10 23 362 6.3E-106 T 21-04-2016 IPR023614 Porin domain SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PANTHER PTHR34501 3 362 8.0E-267 T 21-04-2016 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 157 179 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 57 75 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 103 125 2.0E-67 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 Pfam PF00267 Gram-negative porin 28 362 1.1E-138 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 4.0E-17 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 103 113 4.0E-17 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 4.0E-17 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 4.0E-17 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 159 170 4.0E-17 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 PANTHER PTHR34501:SF6 3 362 8.0E-267 T 21-04-2016 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 SUPERFAMILY SSF56935 23 362 3.36E-81 T 21-04-2016 SDY_2328 d96e7580b153a013c84b4b378473dbdf 362 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 317 333 - T 21-04-2016 IPR013793 Porin, Gram-negative type, conserved site SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.9E-68 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 PANTHER PTHR10584 1 308 8.3E-129 T 21-04-2016 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 SUPERFAMILY SSF53613 7 290 1.87E-69 T 21-04-2016 IPR029056 Ribokinase-like SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 PANTHER PTHR10584:SF170 1 308 8.3E-129 T 21-04-2016 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.9E-101 T 21-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 PIRSF PIRSF000535 2 311 7.9E-119 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.5E-99 T 21-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2316 5648dbdd01a92664ee65d6337de4ceed 312 Gene3D G3DSA:3.40.1190.20 37 309 5.9E-86 T 21-04-2016 IPR029056 Ribokinase-like SDY_0486 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0486 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0486 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 Pfam PF03400 IS1 transposase 2 131 5.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0414 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0414 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0414 fa85e12fa0c2ab2ce22f089b9fdb42f5 131 Pfam PF03400 IS1 transposase 2 131 5.7E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 SUPERFAMILY SSF53850 88 286 4.25E-49 T 21-04-2016 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 Pfam PF03466 LysR substrate binding domain 86 286 3.5E-53 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.6E-14 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 SUPERFAMILY SSF46785 2 109 1.36E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 PANTHER PTHR30126:SF36 2 286 2.2E-200 T 21-04-2016 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 Gene3D G3DSA:3.40.190.10 174 254 1.3E-19 T 21-04-2016 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 Gene3D G3DSA:1.10.10.10 2 82 4.9E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 Gene3D G3DSA:3.40.190.10 87 173 2.8E-18 T 21-04-2016 SDY_2109 e35a61cdee62500f531afe07cfc93f24 293 PANTHER PTHR30126 2 286 2.2E-200 T 21-04-2016 SDY_0945 876dc3992dc25108fa8cc0e9b1bc8d16 219 PANTHER PTHR23291:SF37 2 219 4.3E-119 T 21-04-2016 SDY_0945 876dc3992dc25108fa8cc0e9b1bc8d16 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 1.5E-42 T 21-04-2016 SDY_0945 876dc3992dc25108fa8cc0e9b1bc8d16 219 PANTHER PTHR23291 2 219 4.3E-119 T 21-04-2016 IPR006214 Bax inhibitor 1-related SDY_0945 876dc3992dc25108fa8cc0e9b1bc8d16 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 21-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 Gene3D G3DSA:3.20.20.70 9 226 6.5E-92 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 38.011 T 21-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 PANTHER PTHR36204 2 227 4.6E-118 T 21-04-2016 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 2.2E-92 T 21-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 SUPERFAMILY SSF51366 14 224 5.06E-57 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_3398 c242dfa90d494c66a74172aed42394e0 229 PANTHER PTHR36204:SF1 2 227 4.6E-118 T 21-04-2016 SDY_0772 a18907a37480d42719685f788a75ac0f 350 Gene3D G3DSA:2.60.40.1120 3 60 8.9E-8 T 21-04-2016 IPR014766 Carboxypeptidase, regulatory domain SDY_0772 a18907a37480d42719685f788a75ac0f 350 SUPERFAMILY SSF49464 4 63 5.89E-8 T 21-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain SDY_0772 a18907a37480d42719685f788a75ac0f 350 Pfam PF08400 Prophage tail fibre N-terminal 4 128 5.9E-29 T 21-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 TIGRFAM TIGR01933 hflK: HflK protein 97 356 2.9E-125 T 21-04-2016 IPR010201 HflK GO:0016021 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 PANTHER PTHR10264:SF51 12 391 6.5E-207 T 21-04-2016 IPR010201 HflK GO:0016021 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 PANTHER PTHR10264 12 391 6.5E-207 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 PRINTS PR00721 Stomatin signature 184 201 1.3E-6 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 PRINTS PR00721 Stomatin signature 102 124 1.3E-6 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 PRINTS PR00721 Stomatin signature 149 170 1.3E-6 T 21-04-2016 IPR001972 Stomatin family GO:0016020 SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 SUPERFAMILY SSF117892 128 259 1.57E-20 T 21-04-2016 IPR001107 Band 7 domain SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 Pfam PF01145 SPFH domain / Band 7 family 99 270 7.2E-32 T 21-04-2016 IPR001107 Band 7 domain SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 Pfam PF12221 Bacterial membrane protein N terminal 1 59 6.2E-15 T 21-04-2016 IPR020980 Menbrane protein HflK, N-terminal SDY_4415 37fd69f845563b7f68f536d4cec0d387 419 SMART SM00244 95 255 2.2E-44 T 21-04-2016 IPR001107 Band 7 domain SDY_1667 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1667 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3738 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3738 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_1889 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1889 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3261 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3261 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3233 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3233 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_0789 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0789 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3704 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3704 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3091 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3091 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_2983 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2983 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_1759 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1759 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_4152 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4152 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_2333 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2333 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_4576 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4576 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_4487 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4487 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_1040 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1040 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3162 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3162 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_4209 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4209 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_2555 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2555 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_1727 0284a1dd13b33945ca4b33fb7f9d5567 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1727 0284a1dd13b33945ca4b33fb7f9d5567 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3754 f520f4535bd2739336248b241fc62f05 316 SUPERFAMILY SSF52540 10 315 1.49E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3754 f520f4535bd2739336248b241fc62f05 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 190.842 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SDY_3754 f520f4535bd2739336248b241fc62f05 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.8E-182 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SDY_3754 f520f4535bd2739336248b241fc62f05 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 2.7E-14 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SDY_3754 f520f4535bd2739336248b241fc62f05 316 PIRSF PIRSF000545 1 316 1.7E-149 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SDY_3754 f520f4535bd2739336248b241fc62f05 316 PANTHER PTHR10285:SF7 278 316 4.8E-175 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SDY_3754 f520f4535bd2739336248b241fc62f05 316 PANTHER PTHR10285:SF7 1 262 4.8E-175 T 21-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SDY_3754 f520f4535bd2739336248b241fc62f05 316 PANTHER PTHR10285 278 316 4.8E-175 T 21-04-2016 SDY_3754 f520f4535bd2739336248b241fc62f05 316 PANTHER PTHR10285 1 262 4.8E-175 T 21-04-2016 SDY_3754 f520f4535bd2739336248b241fc62f05 316 Gene3D G3DSA:3.40.50.300 10 316 9.1E-112 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Gene3D G3DSA:2.40.50.140 644 733 1.9E-23 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 21-04-2016 IPR022966 Ribonuclease II/R, conserved site SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SUPERFAMILY SSF50249 221 641 1.94E-143 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Pfam PF00773 RNB domain 260 587 1.6E-110 T 21-04-2016 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.772 T 21-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Pfam PF08206 Ribonuclease B OB domain 87 144 4.1E-22 T 21-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Pfam PF08206 Ribonuclease B OB domain 158 213 8.4E-5 T 21-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SMART SM00955 260 588 9.1E-186 T 21-04-2016 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 PANTHER PTHR23355 1 807 0.0 T 21-04-2016 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 3.4E-13 T 21-04-2016 IPR013668 Ribonuclease R winged-helix domain SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SMART SM00357 86 145 2.1E-16 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 5.0E-292 T 21-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SUPERFAMILY SSF50249 138 235 1.03E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SMART SM00316 642 725 3.7E-17 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SUPERFAMILY SSF50249 67 145 8.01E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 SUPERFAMILY SSF50249 642 731 1.82E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 PANTHER PTHR23355:SF9 1 807 0.0 T 21-04-2016 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 Pfam PF00575 S1 RNA binding domain 641 724 2.5E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_4410 367b95611e4fe8b06dbfd987084c5b35 809 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 9.6E-289 T 21-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 Pfam PF13515 Fusaric acid resistance protein-like 406 528 1.9E-25 T 21-04-2016 SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 Pfam PF12805 FUSC-like inner membrane protein yccS 69 348 3.3E-112 T 21-04-2016 IPR032692 Integral membrane protein YccS, N-terminal SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 PANTHER PTHR30509:SF8 4 712 0.0 T 21-04-2016 SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 11 708 0.0 T 21-04-2016 IPR010020 Integral membrane protein, YccS/YhfK SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 709 0.0 T 21-04-2016 IPR010019 Integral membrane protein, YccS SDY_0935 b6cdc3bb51ed9ef7856dd4ad5f4d1490 720 PANTHER PTHR30509 4 712 0.0 T 21-04-2016 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 SUPERFAMILY SSF56327 146 311 6.18E-42 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 6.6E-46 T 21-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 Gene3D G3DSA:3.40.50.720 1 146 1.3E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 21-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 PANTHER PTHR11540:SF22 1 312 1.0E-238 T 21-04-2016 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.7E-51 T 21-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 PANTHER PTHR11540 1 312 1.0E-238 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.4E-139 T 21-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 PIRSF PIRSF000102 1 310 3.0E-59 T 21-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 SUPERFAMILY SSF51735 1 145 3.51E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 Gene3D G3DSA:3.90.110.10 147 311 7.5E-63 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_3412 a8fab3c9a10e0609322927ca7e65e1af 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 61.239 T 21-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 SMART SM00411 1 91 1.6E-43 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 PANTHER PTHR33175 1 93 1.2E-50 T 21-04-2016 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 Gene3D G3DSA:4.10.520.10 1 91 2.4E-34 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 SUPERFAMILY SSF47729 1 91 6.92E-30 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.437 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-30 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 PANTHER PTHR33175:SF5 1 93 1.2E-50 T 21-04-2016 SDY_2346 2e51831bd5af44198685ea29ced2c512 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.3E-54 T 21-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 SDY_0534 ba433e2ce00debdf33239170d615fec7 195 PANTHER PTHR30083 1 195 1.0E-100 T 21-04-2016 SDY_0534 ba433e2ce00debdf33239170d615fec7 195 Pfam PF11922 Domain of unknown function (DUF3440) 141 173 2.7E-8 T 21-04-2016 IPR021845 Protein of unknown function DUF3440 SDY_0534 ba433e2ce00debdf33239170d615fec7 195 Pfam PF11922 Domain of unknown function (DUF3440) 26 133 1.5E-26 T 21-04-2016 IPR021845 Protein of unknown function DUF3440 SDY_0534 ba433e2ce00debdf33239170d615fec7 195 PANTHER PTHR30083:SF0 1 195 1.0E-100 T 21-04-2016 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 220 434 1.4E-50 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 PANTHER PTHR30404 43 439 1.7E-139 T 21-04-2016 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 SUPERFAMILY SSF53187 218 314 1.16E-52 T 21-04-2016 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 SUPERFAMILY SSF53187 361 437 1.16E-52 T 21-04-2016 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 Gene3D G3DSA:3.40.630.40 362 437 8.4E-60 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 Gene3D G3DSA:3.40.630.40 218 315 8.4E-60 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 SMART SM00646 280 434 3.8E-68 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 Pfam PF11741 AMIN domain 69 172 7.0E-26 T 21-04-2016 IPR021731 AMIN domain SDY_3034 b80aaf493abed5c314b8e4d3d5dcc04d 447 PANTHER PTHR30404:SF0 43 439 1.7E-139 T 21-04-2016 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PANTHER PTHR11732 237 323 2.7E-140 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PANTHER PTHR11732 1 217 2.7E-140 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PANTHER PTHR11732:SF150 237 323 2.7E-140 T 21-04-2016 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PANTHER PTHR11732:SF150 1 217 2.7E-140 T 21-04-2016 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 SUPERFAMILY SSF51430 1 321 1.96E-101 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 Gene3D G3DSA:3.20.20.100 9 322 6.4E-105 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 Pfam PF00248 Aldo/keto reductase family 15 312 6.2E-74 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 6.270888E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 6.270888E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 6.270888E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0311 7d256ef678cbd247cca6093b8e5907da 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 6.270888E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0344 cac643010e273e86918ad3bb0a83df4c 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.2E-129 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SDY_0344 cac643010e273e86918ad3bb0a83df4c 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 44.467 T 21-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 SDY_0344 cac643010e273e86918ad3bb0a83df4c 303 PANTHER PTHR38103:SF1 3 303 2.7E-165 T 21-04-2016 SDY_0344 cac643010e273e86918ad3bb0a83df4c 303 PANTHER PTHR38103 3 303 2.7E-165 T 21-04-2016 SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 SUPERFAMILY SSF53955 99 249 6.27E-42 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Gene3D G3DSA:1.10.530.10 97 257 1.6E-47 T 21-04-2016 SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 SUPERFAMILY SSF54106 400 443 2.49E-10 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Pfam PF01476 LysM domain 402 441 1.1E-9 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Pfam PF01476 LysM domain 343 384 2.2E-14 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 SUPERFAMILY SSF54106 341 384 9.29E-12 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 PANTHER PTHR21666:SF206 16 443 1.6E-217 T 21-04-2016 SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 SMART SM00257 342 385 1.4E-16 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 SMART SM00257 401 443 4.6E-13 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Gene3D G3DSA:3.10.350.10 399 443 1.2E-17 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Gene3D G3DSA:3.10.350.10 340 384 9.9E-20 T 21-04-2016 IPR018392 LysM domain SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 Pfam PF01464 Transglycosylase SLT domain 102 216 2.0E-29 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 SDY_0230 6e707381a5479b2a711965ab6dfed03f 452 PANTHER PTHR21666 16 443 1.6E-217 T 21-04-2016 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 Gene3D G3DSA:3.40.50.2300 167 330 2.5E-52 T 21-04-2016 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 SUPERFAMILY SSF53822 60 333 4.52E-85 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 PANTHER PTHR30146 1 335 1.1E-286 T 21-04-2016 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 SUPERFAMILY SSF47413 1 59 1.56E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 SMART SM00354 1 71 2.8E-36 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 PANTHER PTHR30146:SF57 1 335 1.1E-286 T 21-04-2016 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.62E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.62E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.0E-36 T 21-04-2016 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 Gene3D G3DSA:1.10.260.40 2 57 2.6E-24 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3054 5ea628b31c6636585eedf89ef2f233b9 343 Gene3D G3DSA:3.40.50.2300 58 166 7.4E-45 T 21-04-2016 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 SUPERFAMILY SSF52096 321 440 7.69E-43 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 SUPERFAMILY SSF52096 468 530 7.69E-43 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Pfam PF01343 Peptidase family S49 141 295 4.5E-47 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Pfam PF01343 Peptidase family S49 392 543 1.6E-54 T 21-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 PANTHER PTHR33209:SF1 1 614 6.5E-262 T 21-04-2016 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 5.1E-286 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 335 541 1.9E-53 T 21-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 PANTHER PTHR33209 1 614 6.5E-262 T 21-04-2016 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 PIRSF PIRSF001217 8 618 3.9E-232 T 21-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Gene3D G3DSA:3.90.226.10 31 177 1.6E-70 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Gene3D G3DSA:3.90.226.10 469 559 4.3E-69 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Gene3D G3DSA:3.90.226.10 220 316 1.6E-70 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 Gene3D G3DSA:3.90.226.10 323 432 4.3E-69 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 SUPERFAMILY SSF52096 30 181 2.41E-31 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1507 1f64170e816abb21e923846f3edd0a82 618 SUPERFAMILY SSF52096 212 287 2.41E-31 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_1693 cad6df643b3d892e965a7b053ca678e9 131 PANTHER PTHR33293 6 126 7.3E-24 T 21-04-2016 SDY_1693 cad6df643b3d892e965a7b053ca678e9 131 PANTHER PTHR33293:SF1 6 126 7.3E-24 T 21-04-2016 SDY_1693 cad6df643b3d892e965a7b053ca678e9 131 Pfam PF03400 IS1 transposase 2 131 3.2E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 PIRSF PIRSF004681 1 138 2.0E-42 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 3.4E-54 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 PANTHER PTHR30615 1 138 9.5E-73 T 21-04-2016 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 3.5E-35 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 Gene3D G3DSA:2.60.120.460 1 138 7.2E-55 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_4511 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 SUPERFAMILY SSF111038 1 138 3.01E-46 T 21-04-2016 IPR001602 Uncharacterised protein family UPF0047 SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 Gene3D G3DSA:3.30.70.1460 1 87 1.8E-37 T 21-04-2016 IPR027471 YbeD-like domain SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 PANTHER PTHR38036:SF1 1 87 1.1E-42 T 21-04-2016 SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.681 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 PANTHER PTHR38036 1 87 1.1E-42 T 21-04-2016 SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 5.6E-29 T 21-04-2016 IPR007454 Uncharacterised protein family UPF0250 SDY_0553 95df53110b4b0bff22f15b71a45ee620 87 SUPERFAMILY SSF117991 1 87 3.4E-31 T 21-04-2016 IPR027471 YbeD-like domain SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 Gene3D G3DSA:3.40.50.1000 100 239 9.5E-47 T 21-04-2016 IPR023214 HAD-like domain SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PANTHER PTHR18901:SF14 1 248 3.7E-100 T 21-04-2016 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 SUPERFAMILY SSF56784 2 239 6.79E-59 T 21-04-2016 IPR023214 HAD-like domain SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 209 4.8E-15 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PANTHER PTHR18901 1 248 3.7E-100 T 21-04-2016 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 8.9E-100 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 35.999 T 21-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 8.0E-37 T 21-04-2016 IPR023214 HAD-like domain SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 1.8E-12 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 1.8E-13 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 1.8E-13 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 1.8E-13 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.8E-13 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3694 81e394d3b96c2c8c5eb667d88dbaad23 252 Gene3D G3DSA:1.10.150.240 24 99 1.6E-25 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 SUPERFAMILY SSF46548 107 229 3.14E-31 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 5.4E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.4E-98 T 21-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 SUPERFAMILY SSF54292 4 106 7.27E-29 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 Gene3D G3DSA:3.10.20.30 2 106 3.3E-33 T 21-04-2016 IPR012675 Beta-grasp domain SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 Gene3D G3DSA:1.10.1060.10 107 231 2.5E-36 T 21-04-2016 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 3.0E-31 T 21-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_4397 7342da5a1da6e95563cd071ff2fef44a 244 PANTHER PTHR11921 2 229 2.2E-100 T 21-04-2016 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 PANTHER PTHR23416 1 183 2.1E-99 T 21-04-2016 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.3E-11 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0041 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF12464 Maltose acetyltransferase 7 57 3.1E-16 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 SUPERFAMILY SSF51161 2 182 3.47E-55 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 SMART SM01266 5 59 2.4E-21 T 21-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 Gene3D G3DSA:2.160.10.10 2 183 1.3E-62 T 21-04-2016 SDY_0460 44e440bb09de08f4df2a54e54e6ed7f1 183 PANTHER PTHR23416:SF58 1 183 2.1E-99 T 21-04-2016 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 Gene3D G3DSA:3.40.140.10 2 128 3.1E-38 T 21-04-2016 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 4.1E-24 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 PANTHER PTHR11079:SF10 2 214 3.0E-72 T 21-04-2016 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 SUPERFAMILY SSF53597 144 362 3.17E-59 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 1.1E-160 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 SUPERFAMILY SSF53927 3 145 8.03E-51 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 1.4E-83 T 21-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 Gene3D G3DSA:3.40.430.10 129 363 8.0E-71 T 21-04-2016 IPR024072 Dihydrofolate reductase-like domain SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 Pfam PF01872 RibD C-terminal domain 147 362 1.5E-64 T 21-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 PANTHER PTHR11079 2 214 3.0E-72 T 21-04-2016 SDY_0320 5142fcbef4e6aa688298bee17bdf14c1 367 PIRSF PIRSF006769 1 367 1.7E-142 T 21-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SDY_1366 95f8d8fca70026571632b1fd97236983 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 21-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 SDY_1366 95f8d8fca70026571632b1fd97236983 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.4E-19 T 21-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SDY_1366 95f8d8fca70026571632b1fd97236983 644 SUPERFAMILY SSF50249 8 80 1.17E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1366 95f8d8fca70026571632b1fd97236983 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 21-04-2016 IPR022966 Ribonuclease II/R, conserved site SDY_1366 95f8d8fca70026571632b1fd97236983 644 SUPERFAMILY SSF50249 176 556 2.86E-116 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1366 95f8d8fca70026571632b1fd97236983 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.073 T 21-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 SDY_1366 95f8d8fca70026571632b1fd97236983 644 PANTHER PTHR23355:SF37 23 643 0.0 T 21-04-2016 SDY_1366 95f8d8fca70026571632b1fd97236983 644 SMART SM00357 23 79 1.7E-15 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_1366 95f8d8fca70026571632b1fd97236983 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 3.5E-255 T 21-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SDY_1366 95f8d8fca70026571632b1fd97236983 644 Pfam PF00773 RNB domain 189 516 2.4E-84 T 21-04-2016 SDY_1366 95f8d8fca70026571632b1fd97236983 644 Pfam PF00575 S1 RNA binding domain 559 636 2.1E-11 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_1366 95f8d8fca70026571632b1fd97236983 644 SUPERFAMILY SSF50249 560 643 2.31E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1366 95f8d8fca70026571632b1fd97236983 644 PANTHER PTHR23355 23 643 0.0 T 21-04-2016 SDY_1366 95f8d8fca70026571632b1fd97236983 644 SMART SM00955 189 517 5.2E-129 T 21-04-2016 SDY_1366 95f8d8fca70026571632b1fd97236983 644 SUPERFAMILY SSF50249 83 171 6.34E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2517 3a064a72ccfffbc49879934f415f121d 270 Gene3D G3DSA:3.30.70.660 115 250 5.4E-47 T 21-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.8E-28 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 Pfam PF01416 tRNA pseudouridine synthase 17 112 3.7E-10 T 21-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 PIRSF PIRSF001430 9 260 2.5E-77 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 4.1E-82 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 SUPERFAMILY SSF55120 9 265 1.44E-93 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.902 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 PANTHER PTHR11142 3 268 4.7E-104 T 21-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2517 3a064a72ccfffbc49879934f415f121d 270 Gene3D G3DSA:3.30.70.580 10 113 2.7E-39 T 21-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-31 T 21-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF46785 3 70 6.28E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:1.10.10.10 1 69 7.0E-30 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.35E-14 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.35E-14 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.35E-14 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 3.2E-87 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF51306 76 198 1.27E-38 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.817 T 21-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF00717 Peptidase S24-like 114 180 6.4E-16 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PANTHER PTHR33516 1 202 2.2E-108 T 21-04-2016 SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:2.10.109.10 76 198 2.8E-47 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SDY_4531 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PANTHER PTHR33516:SF2 1 202 2.2E-108 T 21-04-2016 SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 Gene3D G3DSA:2.130.10.10 2 328 1.1E-80 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 327 1.2E-87 T 21-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.289 T 21-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 SUPERFAMILY SSF50974 3 292 9.94E-53 T 21-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 PANTHER PTHR30344 6 328 1.1E-100 T 21-04-2016 SDY_2011 5adfc32c620373e38308e89f4358b1d3 331 PANTHER PTHR30344:SF1 6 328 1.1E-100 T 21-04-2016 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 SUPERFAMILY SSF103473 13 448 1.57E-77 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 Gene3D G3DSA:1.20.1250.20 244 449 1.7E-26 T 21-04-2016 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 Gene3D G3DSA:1.20.1250.20 20 206 1.2E-29 T 21-04-2016 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 Pfam PF00083 Sugar (and other) transporter 18 450 1.9E-141 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 1.4E-152 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 109 128 2.0E-23 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 262 272 2.0E-23 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 352 373 2.0E-23 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 375 387 2.0E-23 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PRINTS PR00171 Sugar transporter signature 26 36 2.0E-23 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PANTHER PTHR23500:SF119 9 460 2.2E-237 T 21-04-2016 SDY_3129 fbf57f1403d47a941868a613ff5fdbf7 464 PANTHER PTHR23500 9 460 2.2E-237 T 21-04-2016 SDY_0590 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_0590 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0590 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0590 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2930 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_2930 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2930 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2930 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4491 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_4491 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4491 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4491 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1123 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_1123 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1123 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1123 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3813 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_3813 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3813 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3813 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0284 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_0284 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0284 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0284 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0715 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_0715 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0715 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0715 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4609 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_4609 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4609 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4609 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2960 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_2960 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2960 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2960 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4089 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_4089 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4089 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4089 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1672 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_1672 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1672 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1672 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0728 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_0728 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0728 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0728 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1386 b749cc7f4d4b008c56a903b6264e55e3 100 PANTHER PTHR33215 3 100 6.1E-18 T 21-04-2016 SDY_1386 b749cc7f4d4b008c56a903b6264e55e3 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1386 b749cc7f4d4b008c56a903b6264e55e3 100 SUPERFAMILY SSF46689 4 94 4.66E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1386 b749cc7f4d4b008c56a903b6264e55e3 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Gene3D G3DSA:3.40.1030.10 273 528 3.1E-97 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PANTHER PTHR11922 1 59 2.8E-198 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PANTHER PTHR11922 266 524 2.8E-198 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Gene3D G3DSA:1.20.970.10 201 267 2.8E-25 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PANTHER PTHR11922:SF25 1 59 2.8E-198 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PANTHER PTHR11922:SF25 266 524 2.8E-198 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 8.9E-55 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 SUPERFAMILY SSF52317 3 191 1.74E-44 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 6.7E-129 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.3E-12 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.3E-12 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.3E-12 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 6.1E-43 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 SUPERFAMILY SSF52418 269 527 1.3E-91 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Gene3D G3DSA:3.40.50.880 3 192 3.2E-53 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 8.0E-102 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 5.4E-5 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 5.4E-5 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 1.5E-13 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.509 T 21-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 SUPERFAMILY SSF47648 200 266 1.11E-14 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.4E-33 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.4E-33 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.4E-33 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.4E-33 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.4E-33 T 21-04-2016 SDY_1331 0efc5b1dd3ab5540526caa94d27efe61 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.4E-33 T 21-04-2016 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 160 189 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 88 112 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 232 259 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 260 286 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 123 145 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 29 45 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PRINTS PR00073 Coprogen oxidase signature 46 67 1.6E-90 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 21-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 SUPERFAMILY SSF102886 3 299 6.02E-139 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PANTHER PTHR10755 7 299 4.8E-193 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 59.168 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 Gene3D G3DSA:3.40.1500.10 3 299 1.1E-138 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 PIRSF PIRSF000166 1 299 5.6E-130 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_2634 5f454a27b2f1692681d69507a6ca765f 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 1.0E-133 T 21-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 Gene3D G3DSA:3.30.700.10 14 79 6.6E-9 T 21-04-2016 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 32 9.3E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 146 9.8E-58 T 21-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 PANTHER PTHR30093 5 150 7.5E-70 T 21-04-2016 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 PANTHER PTHR30093:SF9 5 150 7.5E-70 T 21-04-2016 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 Pfam PF08334 Type II secretion system (T2SS), protein G 36 145 2.3E-42 T 21-04-2016 IPR013545 Type II secretion system protein G SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.5E-22 T 21-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.5E-22 T 21-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 4.6E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3096 a2bf7dbff55a8b552f564fb2872f2483 151 SUPERFAMILY SSF54523 39 146 7.85E-40 T 21-04-2016 SDY_1398 1a288033ba493409c00252d949cedd51 109 PANTHER PTHR30146 1 103 1.7E-38 T 21-04-2016 SDY_1398 1a288033ba493409c00252d949cedd51 109 Gene3D G3DSA:3.40.50.2300 52 103 5.2E-9 T 21-04-2016 SDY_1398 1a288033ba493409c00252d949cedd51 109 SUPERFAMILY SSF47413 2 57 5.63E-19 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1398 1a288033ba493409c00252d949cedd51 109 SMART SM00354 2 72 3.0E-32 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1398 1a288033ba493409c00252d949cedd51 109 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.2E-22 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1398 1a288033ba493409c00252d949cedd51 109 PANTHER PTHR30146:SF30 1 103 1.7E-38 T 21-04-2016 SDY_1398 1a288033ba493409c00252d949cedd51 109 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1398 1a288033ba493409c00252d949cedd51 109 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.8E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1398 1a288033ba493409c00252d949cedd51 109 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.8E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1398 1a288033ba493409c00252d949cedd51 109 Gene3D G3DSA:1.10.260.40 2 51 9.3E-26 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.0E-35 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 PANTHER PTHR11632:SF5 1 573 0.0 T 21-04-2016 SDY_0661 52615fd1cab5991de845f63a1903993b 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 7.7E-241 T 21-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_0661 52615fd1cab5991de845f63a1903993b 588 PANTHER PTHR11632 1 573 0.0 T 21-04-2016 SDY_0661 52615fd1cab5991de845f63a1903993b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 5.5E-5 T 21-04-2016 SDY_0661 52615fd1cab5991de845f63a1903993b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-5 T 21-04-2016 SDY_0661 52615fd1cab5991de845f63a1903993b 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_0661 52615fd1cab5991de845f63a1903993b 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 6.4E-277 T 21-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Gene3D G3DSA:3.90.700.10 243 349 1.5E-40 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_0661 52615fd1cab5991de845f63a1903993b 588 PIRSF PIRSF000171 1 579 5.1E-47 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SDY_0661 52615fd1cab5991de845f63a1903993b 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 21-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Pfam PF00890 FAD binding domain 9 405 1.2E-117 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SDY_0661 52615fd1cab5991de845f63a1903993b 588 Gene3D G3DSA:3.50.50.60 351 425 1.8E-118 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Gene3D G3DSA:3.50.50.60 6 242 1.8E-118 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Gene3D G3DSA:4.10.80.40 548 588 2.7E-21 T 21-04-2016 SDY_0661 52615fd1cab5991de845f63a1903993b 588 SUPERFAMILY SSF51905 4 259 5.1E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 SUPERFAMILY SSF51905 359 440 5.1E-75 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 SUPERFAMILY SSF46977 452 588 2.88E-46 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_0661 52615fd1cab5991de845f63a1903993b 588 Gene3D G3DSA:1.20.58.100 433 547 6.0E-38 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 SUPERFAMILY SSF56601 23 473 4.56E-100 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 Gene3D G3DSA:3.40.710.10 227 455 2.8E-67 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 7.8E-178 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 6.5E-186 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 5.6E-39 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 5.6E-39 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 5.6E-39 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 5.6E-39 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 5.6E-39 T 21-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PANTHER PTHR30023 23 473 3.7E-145 T 21-04-2016 SDY_3363 c83c002a993d61599b745f3f49dc55a4 477 PANTHER PTHR30023:SF0 23 473 3.7E-145 T 21-04-2016 SDY_0340 0c174e54c8d780ea99ca434c59588df6 448 Pfam PF01609 Transposase DDE domain 134 358 7.1E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_0340 0c174e54c8d780ea99ca434c59588df6 448 SUPERFAMILY SSF53098 117 419 3.64E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0340 0c174e54c8d780ea99ca434c59588df6 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 2.8E-29 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_0340 0c174e54c8d780ea99ca434c59588df6 448 PANTHER PTHR37529 4 446 8.7E-83 T 21-04-2016 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 PANTHER PTHR11941 9 278 1.1E-199 T 21-04-2016 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 PANTHER PTHR11941:SF20 9 278 1.1E-199 T 21-04-2016 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 4.7E-79 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 Gene3D G3DSA:3.90.226.10 22 222 1.1E-70 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 21-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 1.0E-151 T 21-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 SUPERFAMILY SSF52096 13 280 4.13E-79 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 Gene3D G3DSA:1.10.12.10 223 273 2.3E-30 T 21-04-2016 IPR014748 Crontonase, C-terminal SDY_2458 b367dfceb02c8bed0194c164a23d9971 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.626 T 21-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 Gene3D G3DSA:3.40.190.10 183 256 3.7E-9 T 21-04-2016 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 Gene3D G3DSA:1.10.10.10 2 88 1.3E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 Gene3D G3DSA:3.40.190.10 105 182 7.3E-5 T 21-04-2016 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 PANTHER PTHR30579 1 307 1.6E-190 T 21-04-2016 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 PANTHER PTHR30579:SF5 1 307 1.6E-190 T 21-04-2016 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 SUPERFAMILY SSF53850 105 292 1.05E-21 T 21-04-2016 SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 SUPERFAMILY SSF46785 3 88 4.64E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0398 76a1165fd063244b226d2b4ad10b85bc 308 Pfam PF03466 LysR substrate binding domain 91 290 8.2E-21 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_4418 0291307edb68fcfe2682177f392ec465 316 Pfam PF01715 IPP transferase 46 290 1.6E-85 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SDY_4418 0291307edb68fcfe2682177f392ec465 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 2.3E-125 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SDY_4418 0291307edb68fcfe2682177f392ec465 316 Gene3D G3DSA:1.10.287.890 207 289 2.2E-34 T 21-04-2016 SDY_4418 0291307edb68fcfe2682177f392ec465 316 SUPERFAMILY SSF52540 13 157 7.02E-18 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4418 0291307edb68fcfe2682177f392ec465 316 Gene3D G3DSA:3.40.50.300 10 178 4.0E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4418 0291307edb68fcfe2682177f392ec465 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.926 T 21-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SDY_4418 0291307edb68fcfe2682177f392ec465 316 PANTHER PTHR11088 1 302 3.3E-125 T 21-04-2016 SDY_0625 24172dcfd7040b4d7ca58ef19cb96d78 120 Pfam PF01402 Ribbon-helix-helix protein, copG family 75 111 7.4E-10 T 21-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SDY_0625 24172dcfd7040b4d7ca58ef19cb96d78 120 SUPERFAMILY SSF47598 74 109 9.34E-5 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 PANTHER PTHR10000 7 140 7.7E-99 T 21-04-2016 SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 134 3.7E-25 T 21-04-2016 IPR023214 HAD-like domain SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 SUPERFAMILY SSF56784 7 138 1.98E-30 T 21-04-2016 IPR023214 HAD-like domain SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 Gene3D G3DSA:3.30.1240.10 8 50 1.6E-6 T 21-04-2016 SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 Gene3D G3DSA:3.40.50.1000 51 139 1.5E-25 T 21-04-2016 IPR023214 HAD-like domain SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 PANTHER PTHR10000:SF21 7 140 7.7E-99 T 21-04-2016 SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 ProSitePatterns PS01229 Hypothetical cof family signature 2. 86 108 - T 21-04-2016 SDY_0383 b00f9f40d5ebf5758e7af52ebbe85439 148 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 22 105 1.4E-15 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 SMART SM00086 80 121 6.6E-4 T 21-04-2016 IPR001610 PAC motif SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.66E-40 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.66E-40 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.66E-40 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.66E-40 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 Pfam PF08447 PAS fold 31 113 5.5E-15 T 21-04-2016 IPR013655 PAS fold-3 GO:0005515 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PANTHER PTHR32089 51 503 9.8E-146 T 21-04-2016 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 Gene3D G3DSA:3.30.450.20 20 114 2.4E-20 T 21-04-2016 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 Gene3D G3DSA:1.10.287.950 274 478 5.8E-52 T 21-04-2016 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 SUPERFAMILY SSF55785 21 114 6.81E-24 T 21-04-2016 IPR000014 PAS domain SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 SMART SM00283 259 506 6.8E-91 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 PANTHER PTHR32089:SF64 51 503 9.8E-146 T 21-04-2016 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 Pfam PF00672 HAMP domain 188 246 6.9E-8 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 6.6E-11 T 21-04-2016 IPR000014 PAS domain SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 SUPERFAMILY SSF58104 233 505 2.88E-60 T 21-04-2016 SDY_3256 5a5d9b08beb079d2769d0d6e599ef582 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 503 7.9E-49 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SDY_1039 8df76d941074e186097c8e6d835986cd 216 Gene3D G3DSA:3.40.50.2300 1 120 9.2E-39 T 21-04-2016 SDY_1039 8df76d941074e186097c8e6d835986cd 216 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1039 8df76d941074e186097c8e6d835986cd 216 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 207 5.8E-107 T 21-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 SDY_1039 8df76d941074e186097c8e6d835986cd 216 PANTHER PTHR26402 1 201 1.4E-91 T 21-04-2016 SDY_1039 8df76d941074e186097c8e6d835986cd 216 SMART SM00448 1 111 1.6E-42 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1039 8df76d941074e186097c8e6d835986cd 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 201 2.1E-18 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_1039 8df76d941074e186097c8e6d835986cd 216 SMART SM00862 143 215 1.1E-12 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_1039 8df76d941074e186097c8e6d835986cd 216 SUPERFAMILY SSF52172 1 125 3.13E-39 T 21-04-2016 IPR011006 CheY-like superfamily SDY_1039 8df76d941074e186097c8e6d835986cd 216 SUPERFAMILY SSF46894 117 203 7.94E-21 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_1039 8df76d941074e186097c8e6d835986cd 216 PANTHER PTHR26402:SF578 1 201 1.4E-91 T 21-04-2016 SDY_1039 8df76d941074e186097c8e6d835986cd 216 Gene3D G3DSA:1.10.10.10 123 201 6.6E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 Gene3D G3DSA:3.90.1150.10 280 403 9.3E-38 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 SUPERFAMILY SSF53383 7 401 2.96E-94 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 Gene3D G3DSA:3.40.640.10 51 279 7.1E-69 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 PANTHER PTHR11751:SF303 9 399 5.8E-200 T 21-04-2016 SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 PANTHER PTHR11751 9 399 5.8E-200 T 21-04-2016 SDY_2486 5c17a8e01ebbde4460fb5f4c4a1c45d7 405 Pfam PF00155 Aminotransferase class I and II 58 387 1.4E-47 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_2534 355a229f9d3d6d4824bc7b74dbd56413 168 Gene3D G3DSA:2.60.40.1090 44 168 5.4E-10 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2534 355a229f9d3d6d4824bc7b74dbd56413 168 Pfam PF00419 Fimbrial protein 42 168 1.2E-17 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2534 355a229f9d3d6d4824bc7b74dbd56413 168 SUPERFAMILY SSF49401 42 168 3.08E-25 T 21-04-2016 IPR008966 Adhesion domain SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.1E-75 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 Gene3D G3DSA:3.40.1280.10 1 153 6.4E-71 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.8E-34 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 PIRSF PIRSF029256 1 154 1.7E-71 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.561 T 21-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 PANTHER PTHR12029:SF31 1 157 6.1E-83 T 21-04-2016 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 PANTHER PTHR12029 1 157 6.1E-83 T 21-04-2016 SDY_4039 7c76e59aa2a2e3baa2b5f51ee72498b7 157 SUPERFAMILY SSF75217 1 152 3.53E-46 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_0762 a8792c01f4c157871312e908e6b06071 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 8.8E-85 T 21-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0762 a8792c01f4c157871312e908e6b06071 220 PANTHER PTHR10683 1 220 1.1E-145 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0762 a8792c01f4c157871312e908e6b06071 220 Gene3D G3DSA:3.20.20.70 1 213 4.7E-60 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0762 a8792c01f4c157871312e908e6b06071 220 PANTHER PTHR10683:SF15 1 220 1.1E-145 T 21-04-2016 SDY_0762 a8792c01f4c157871312e908e6b06071 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 50.75 T 21-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 SDY_0762 a8792c01f4c157871312e908e6b06071 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0762 a8792c01f4c157871312e908e6b06071 220 SUPERFAMILY SSF51569 1 216 7.85E-62 T 21-04-2016 SDY_0762 a8792c01f4c157871312e908e6b06071 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0762 a8792c01f4c157871312e908e6b06071 220 Pfam PF00923 Transaldolase 3 205 9.7E-44 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:3.40.50.1010 8 186 1.1E-73 T 21-04-2016 IPR029060 PIN domain-like SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:1.10.150.20 712 818 5.0E-37 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:3.30.420.10 329 542 4.1E-87 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 21-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 7.5E-30 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SUPERFAMILY SSF47807 171 291 4.49E-29 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Pfam PF00476 DNA polymerase family A 551 925 3.5E-161 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Pfam PF01612 3'-5' exonuclease 330 517 1.8E-45 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SUPERFAMILY SSF88723 7 170 4.21E-57 T 21-04-2016 IPR029060 PIN domain-like SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SMART SM00279 173 208 1.2E-13 T 21-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 1.7E-289 T 21-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SUPERFAMILY SSF56672 523 928 1.78E-164 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PANTHER PTHR10133 6 288 0.0 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PANTHER PTHR10133 316 927 0.0 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.6E-80 T 21-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:1.10.150.20 187 253 2.9E-24 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SMART SM00475 7 268 2.9E-144 T 21-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.9E-55 T 21-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:1.20.1060.10 543 663 4.1E-37 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PANTHER PTHR10133:SF27 6 288 0.0 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 PANTHER PTHR10133:SF27 316 927 0.0 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SUPERFAMILY SSF53098 326 518 7.09E-56 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:3.30.70.370 819 928 1.2E-69 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 Gene3D G3DSA:3.30.70.370 664 711 1.2E-69 T 21-04-2016 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SMART SM00482 686 892 4.6E-127 T 21-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_3879 95e1a19cc61724b1ef2abb279cff72c6 928 SMART SM00474 330 517 2.6E-48 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 PANTHER PTHR30466:SF2 1 152 5.0E-72 T 21-04-2016 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 Gene3D G3DSA:2.30.110.10 1 148 2.2E-48 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 PANTHER PTHR30466 1 152 5.0E-72 T 21-04-2016 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 SMART SM00903 1 146 6.6E-52 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 1 147 8.4E-83 T 21-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 SUPERFAMILY SSF50475 1 147 2.99E-42 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 Pfam PF01613 Flavin reductase like domain 1 147 3.8E-30 T 21-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SDY_0982 2b2fa1ddc1863b7febb7f514e73034b2 152 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 152 39.35 T 21-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 2.2E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 SUPERFAMILY SSF161098 17 223 6.28E-37 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 PANTHER PTHR30450 1 237 2.3E-190 T 21-04-2016 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 Gene3D G3DSA:1.10.3720.10 20 228 5.1E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.4E-13 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_2506 f4eb4d7cb66164480bde4b4c647dc70e 238 PANTHER PTHR30450:SF5 1 237 2.3E-190 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 8.4E-57 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 8.4E-57 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 8.4E-57 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 8.4E-57 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 8.4E-57 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Gene3D G3DSA:1.10.8.60 500 584 4.7E-33 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 SUPERFAMILY SSF54211 595 765 2.05E-55 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 TIGRFAM TIGR00763 lon: endopeptidase La 12 765 0.0 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 765 5.9E-91 T 21-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PANTHER PTHR10046:SF43 8 776 0.0 T 21-04-2016 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Gene3D G3DSA:3.30.230.10 590 765 3.9E-72 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 6.1E-43 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Hamap MF_01973 Lon protease [lon]. 11 770 71.006 T 21-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 SMART SM00464 10 202 3.9E-88 T 21-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PIRSF PIRSF001174 1 775 0.0 T 21-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 SMART SM00382 348 492 4.9E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 PANTHER PTHR10046 8 776 0.0 T 21-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Gene3D G3DSA:3.40.50.300 310 499 3.6E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 2.0E-17 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 21-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 SUPERFAMILY SSF52540 313 587 5.4E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0293 dbe8fb9c7b90f11b2ff22ad302e142db 812 SUPERFAMILY SSF88697 10 201 4.47E-52 T 21-04-2016 IPR015947 PUA-like domain SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 SMART SM00342 150 231 1.8E-28 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 SUPERFAMILY SSF46689 186 235 1.57E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 Pfam PF12833 Helix-turn-helix domain 157 230 1.2E-14 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 1.0E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 1.0E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 PANTHER PTHR11019 138 239 3.4E-37 T 21-04-2016 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 Gene3D G3DSA:1.10.10.60 186 234 4.3E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 PANTHER PTHR11019:SF46 138 239 3.4E-37 T 21-04-2016 SDY_1660 ab3ced1dbb419e08a44e32929b9317ec 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 186 227 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_0926 d4cde8ccefd4aac4b796529242bb3092 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.965 T 21-04-2016 IPR007040 Ribosome modulation factor SDY_0926 d4cde8ccefd4aac4b796529242bb3092 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 7.0E-26 T 21-04-2016 IPR007040 Ribosome modulation factor SDY_0926 d4cde8ccefd4aac4b796529242bb3092 55 Pfam PF04957 Ribosome modulation factor 1 52 1.3E-30 T 21-04-2016 IPR007040 Ribosome modulation factor SDY_0926 d4cde8ccefd4aac4b796529242bb3092 55 Gene3D G3DSA:1.10.10.620 1 51 5.2E-28 T 21-04-2016 IPR023200 Ribosome modulation factor-like domain SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PANTHER PTHR22855 1 301 2.1E-187 T 21-04-2016 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PANTHER PTHR22855:SF17 1 301 2.1E-187 T 21-04-2016 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 Pfam PF01039 Carboxyl transferase domain 54 286 1.8E-19 T 21-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 SUPERFAMILY SSF52096 23 284 3.42E-91 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.053 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 Gene3D G3DSA:3.90.226.10 17 285 2.6E-81 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_2515 17bcad0bf8fb5863336c379e140e84a2 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 7.3E-152 T 21-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Gene3D G3DSA:3.40.50.720 1 152 4.6E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Gene3D G3DSA:3.40.50.720 233 376 1.1E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 SUPERFAMILY SSF51735 232 376 3.83E-33 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Pfam PF02080 TrkA-C domain 390 451 2.4E-9 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Pfam PF02254 TrkA-N domain 235 350 3.2E-26 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 Pfam PF02254 TrkA-N domain 3 111 5.8E-30 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PANTHER PTHR13789:SF225 416 440 7.6E-86 T 21-04-2016 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PANTHER PTHR13789:SF225 1 170 7.6E-86 T 21-04-2016 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 SUPERFAMILY SSF51735 1 152 3.07E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 21-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PANTHER PTHR13789 416 440 7.6E-86 T 21-04-2016 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 PANTHER PTHR13789 1 170 7.6E-86 T 21-04-2016 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 SUPERFAMILY SSF116726 390 450 2.35E-6 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_3466 c9741d7367f00fb0ce3bf1a97acf3f1d 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 SUPERFAMILY SSF55874 336 476 7.07E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423:SF496 209 486 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423:SF496 11 16 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423:SF496 56 153 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423 209 486 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423 11 16 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PANTHER PTHR24423 56 153 9.7E-180 T 21-04-2016 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 SUPERFAMILY SSF47384 250 319 5.3E-5 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 465 1.9E-11 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 SMART SM00387 374 480 6.2E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 Pfam PF08918 PhoQ Sensor 10 188 2.4E-85 T 21-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.2E-6 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 Gene3D G3DSA:3.30.565.10 340 482 8.0E-31 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2023 08a2f9d3d31844f5cfa215b1e455ab5f 486 Pfam PF00672 HAMP domain 196 260 2.8E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_0232 23db46b4656848bda71f0c0859e56ca3 246 PANTHER PTHR10108:SF836 83 225 2.7E-93 T 21-04-2016 SDY_0232 23db46b4656848bda71f0c0859e56ca3 246 PANTHER PTHR10108 83 225 2.7E-93 T 21-04-2016 SDY_0232 23db46b4656848bda71f0c0859e56ca3 246 SUPERFAMILY SSF53335 83 209 5.34E-18 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0232 23db46b4656848bda71f0c0859e56ca3 246 Pfam PF08241 Methyltransferase domain 77 131 3.9E-11 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SDY_0232 23db46b4656848bda71f0c0859e56ca3 246 Gene3D G3DSA:3.40.50.150 83 212 9.6E-19 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1220 0abaaa373098b720318bf5e22fdde870 139 Gene3D G3DSA:2.10.109.10 25 138 3.6E-48 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SDY_1220 0abaaa373098b720318bf5e22fdde870 139 PANTHER PTHR33516:SF1 1 139 5.9E-62 T 21-04-2016 SDY_1220 0abaaa373098b720318bf5e22fdde870 139 SUPERFAMILY SSF51306 14 135 3.14E-34 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SDY_1220 0abaaa373098b720318bf5e22fdde870 139 Pfam PF00717 Peptidase S24-like 57 120 1.7E-11 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B SDY_1220 0abaaa373098b720318bf5e22fdde870 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 5.2E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_1220 0abaaa373098b720318bf5e22fdde870 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 5.2E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_1220 0abaaa373098b720318bf5e22fdde870 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 5.2E-12 T 21-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SDY_1220 0abaaa373098b720318bf5e22fdde870 139 PANTHER PTHR33516 1 139 5.9E-62 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.1E-43 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Gene3D G3DSA:1.20.50.20 368 426 2.0E-28 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SMART SM00400 36 90 7.6E-38 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SUPERFAMILY SSF117023 447 579 4.05E-43 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SUPERFAMILY SSF56731 115 428 2.35E-116 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 PANTHER PTHR30313 3 579 7.3E-186 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SMART SM00766 450 575 7.8E-48 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Gene3D G3DSA:3.90.980.10 116 240 2.6E-47 T 21-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.615 T 21-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SUPERFAMILY SSF57783 4 100 8.67E-36 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 8.3E-13 T 21-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Gene3D G3DSA:3.90.580.10 1 100 1.5E-40 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Gene3D G3DSA:1.10.860.10 437 580 7.7E-55 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Gene3D G3DSA:3.40.1360.10 241 367 1.1E-48 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Pfam PF13155 Toprim-like 263 348 4.0E-15 T 21-04-2016 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 SMART SM00493 259 330 2.3E-21 T 21-04-2016 IPR006171 Toprim domain SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 3.0E-33 T 21-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 5.2E-152 T 21-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SDY_3250 5721f3c3f01b2cb239a3144b437570b4 581 Pfam PF01807 CHC2 zinc finger 7 100 5.3E-41 T 21-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Gene3D G3DSA:2.30.38.10 533 609 2.0E-13 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Pfam PF00501 AMP-binding enzyme 233 619 2.8E-65 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 SMART SM00563 30 140 1.1E-28 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Gene3D G3DSA:3.40.50.980 377 532 3.1E-40 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 SUPERFAMILY SSF56801 219 712 5.1E-93 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_3053 e7539eceed0d70a205b32dd43459e736 719 PANTHER PTHR24096 124 715 0.0 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Pfam PF01553 Acyltransferase 15 137 4.2E-19 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Gene3D G3DSA:3.40.50.980 233 376 1.9E-15 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 SUPERFAMILY SSF69593 3 170 2.48E-21 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 Gene3D G3DSA:3.30.300.30 617 716 1.1E-8 T 21-04-2016 SDY_3053 e7539eceed0d70a205b32dd43459e736 719 PANTHER PTHR24096:SF177 124 715 0.0 T 21-04-2016 SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 Pfam PF01928 CYTH domain 3 196 5.5E-38 T 21-04-2016 IPR023577 CYTH domain SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 SMART SM01118 2 202 7.6E-42 T 21-04-2016 IPR023577 CYTH domain SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 PANTHER PTHR39569:SF1 2 433 2.1E-160 T 21-04-2016 SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 Gene3D G3DSA:2.40.320.10 1 212 8.3E-50 T 21-04-2016 IPR023577 CYTH domain SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 PANTHER PTHR39569 2 433 2.1E-160 T 21-04-2016 SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 4 88 0.004 T 21-04-2016 SDY_3237 ae5693fc008285dc6e23c865a5c2c1c7 433 SUPERFAMILY SSF55154 1 217 1.96E-54 T 21-04-2016 IPR033469 CYTH-like domain SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 21-04-2016 IPR018120 Glycoside hydrolase family 1, active site SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 SUPERFAMILY SSF51445 2 471 4.29E-161 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 4.2E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 4.2E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 4.2E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 4.2E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 4.2E-15 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PANTHER PTHR10353 1 474 0.0 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 PANTHER PTHR10353:SF74 1 474 0.0 T 21-04-2016 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 Gene3D G3DSA:3.20.20.80 3 473 7.1E-152 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 21-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SDY_2912 ba7e5d44371103efbb1a723e26bafb41 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 4.4E-134 T 21-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 PANTHER PTHR11260:SF285 1 203 8.0E-65 T 21-04-2016 SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 PANTHER PTHR11260 1 203 8.0E-65 T 21-04-2016 SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 Gene3D G3DSA:1.20.1050.10 84 198 1.3E-48 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 SUPERFAMILY SSF47616 78 201 3.41E-34 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 5.2E-14 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 9.5E-11 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 Gene3D G3DSA:3.40.30.10 1 83 7.3E-27 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2499 ed3a4a67333c405c6727b678e63ef119 215 SUPERFAMILY SSF52833 1 84 6.73E-22 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2532 334d0900b9fe8298146a0288d2fa3616 179 Gene3D G3DSA:2.60.40.1090 31 178 6.2E-33 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2532 334d0900b9fe8298146a0288d2fa3616 179 SUPERFAMILY SSF49401 31 178 1.39E-26 T 21-04-2016 IPR008966 Adhesion domain SDY_2532 334d0900b9fe8298146a0288d2fa3616 179 Pfam PF00419 Fimbrial protein 34 178 1.2E-18 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2532 334d0900b9fe8298146a0288d2fa3616 179 PANTHER PTHR33420 11 179 8.1E-83 T 21-04-2016 SDY_2532 334d0900b9fe8298146a0288d2fa3616 179 PANTHER PTHR33420:SF9 11 179 8.1E-83 T 21-04-2016 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Gene3D G3DSA:1.10.1060.10 335 449 2.7E-18 T 21-04-2016 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.4E-33 T 21-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 PANTHER PTHR11780 13 482 1.1E-263 T 21-04-2016 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 SUPERFAMILY SSF46548 336 444 7.5E-20 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 SUPERFAMILY SSF142019 94 303 1.15E-60 T 21-04-2016 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 2.8E-47 T 21-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Pfam PF12838 4Fe-4S dicluster domain 376 430 1.1E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 3.6E-179 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Pfam PF10531 SLBB domain 296 344 1.0E-11 T 21-04-2016 IPR019554 Soluble ligand binding domain SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 PANTHER PTHR11780:SF1 13 482 1.1E-263 T 21-04-2016 SDY_1852 b9f3ff1c753e18f55107b5d4457b27d9 772 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 748 268.387 T 21-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:3.30.565.10 343 518 2.1E-44 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF00072 Response regulator receiver domain 670 780 3.4E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SMART SM00304 200 252 1.7E-7 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 6.0E-55 T 21-04-2016 IPR019247 Histidine kinase BarA, N-terminal SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF55874 346 516 8.38E-44 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3003 72978632c51f18b6449e7f060a82d213 918 SMART SM00073 819 914 1.6E-23 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423:SF540 194 232 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423:SF540 271 573 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423:SF540 6 20 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423:SF540 667 822 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF52172 668 785 3.7E-35 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3003 72978632c51f18b6449e7f060a82d213 918 SMART SM00387 404 520 2.3E-37 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47384 277 358 1.96E-22 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 9.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 9.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 9.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 9.9E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423 194 232 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423 271 573 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423 6 20 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 PANTHER PTHR24423 667 822 2.9E-219 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SMART SM00388 292 357 1.2E-25 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF01627 Hpt domain 828 908 1.3E-12 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF00672 HAMP domain 181 248 1.4E-11 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47226 764 777 7.33E-22 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47226 808 909 7.33E-22 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:3.40.50.2300 668 783 5.5E-37 T 21-04-2016 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.2E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:1.10.287.130 284 342 6.5E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3003 72978632c51f18b6449e7f060a82d213 918 SMART SM00448 668 781 4.9E-33 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3003 72978632c51f18b6449e7f060a82d213 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 3.0E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3003 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:1.20.120.160 820 916 1.7E-20 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_4421 3cf4551f131dd653f0227023b6c1c1fb 153 Gene3D G3DSA:3.40.50.300 4 150 6.5E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4421 3cf4551f131dd653f0227023b6c1c1fb 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.2E-42 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SDY_4421 3cf4551f131dd653f0227023b6c1c1fb 153 PANTHER PTHR33540 1 152 1.6E-54 T 21-04-2016 SDY_4421 3cf4551f131dd653f0227023b6c1c1fb 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 1.1E-59 T 21-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SDY_4421 3cf4551f131dd653f0227023b6c1c1fb 153 SUPERFAMILY SSF52540 29 131 9.25E-25 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 52.203 T 21-04-2016 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.4E-20 T 21-04-2016 IPR019903 Repair of iron centres family SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 PANTHER PTHR36438:SF1 1 220 7.9E-108 T 21-04-2016 SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 PANTHER PTHR36438 1 220 7.9E-108 T 21-04-2016 SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 1.0E-80 T 21-04-2016 IPR019903 Repair of iron centres family SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 1.1E-27 T 21-04-2016 IPR012312 Haemerythrin-like SDY_4379 e182e2eb845270a8bcbd1103a8acf778 220 Gene3D G3DSA:1.20.120.520 78 217 1.5E-26 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 SUPERFAMILY SSF100950 83 245 8.38E-34 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 SMART SM01134 80 240 1.9E-66 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 Gene3D G3DSA:3.40.50.1360 84 231 9.6E-19 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 Gene3D G3DSA:1.10.10.10 7 65 2.0E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2262 a77db54b82a7066dabdac743946b51e7 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 5.6E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 5.6E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 PANTHER PTHR30363 2 259 1.1E-200 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 SMART SM00420 8 60 3.5E-18 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 PANTHER PTHR30363:SF21 2 259 1.1E-200 T 21-04-2016 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 SUPERFAMILY SSF46785 7 63 1.35E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2262 a77db54b82a7066dabdac743946b51e7 259 Pfam PF08220 DeoR-like helix-turn-helix domain 8 60 3.3E-16 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2262 a77db54b82a7066dabdac743946b51e7 259 Pfam PF00455 DeoR C terminal sensor domain 85 238 3.7E-51 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 PANTHER PTHR22604:SF126 1 303 3.0E-140 T 21-04-2016 SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 SUPERFAMILY SSF55347 126 265 5.23E-41 T 21-04-2016 SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 SUPERFAMILY SSF51735 3 137 2.19E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 Gene3D G3DSA:3.30.360.10 128 306 2.1E-65 T 21-04-2016 SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 1.3E-25 T 21-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 Gene3D G3DSA:3.40.50.720 2 127 1.1E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2084 1dd05f565cd2be336210a7d96839f3c7 307 PANTHER PTHR22604 1 303 3.0E-140 T 21-04-2016 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:1.10.1050.10 1 101 2.9E-41 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.44 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM01390 3 95 1.3E-49 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 SUPERFAMILY SSF55174 3 206 1.96E-73 T 21-04-2016 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 21-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.4E-87 T 21-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:3.10.290.10 102 190 1.8E-33 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.0E-30 T 21-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF01479 S4 domain 97 143 7.1E-19 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 PANTHER PTHR11831 1 206 2.9E-96 T 21-04-2016 IPR022801 Ribosomal protein S4/S9 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM00363 96 160 8.2E-21 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3472 21ff7290df0255854c7a7e36a8c2ec66 206 PANTHER PTHR11831:SF4 1 206 2.9E-96 T 21-04-2016 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 21-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 21-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.689 T 21-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 2.3E-37 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 PANTHER PTHR23309 8 723 0.0 T 21-04-2016 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 21-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Gene3D G3DSA:1.10.1040.10 632 710 2.2E-17 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 SUPERFAMILY SSF52096 3 303 1.76E-68 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_3899 066d1007f34c8e027e2415375741ce4e 729 PANTHER PTHR23309:SF18 8 723 0.0 T 21-04-2016 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 SUPERFAMILY SSF51735 314 495 3.58E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Gene3D G3DSA:1.10.1040.10 498 593 2.9E-21 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 SUPERFAMILY SSF48179 495 639 1.7E-30 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Gene3D G3DSA:3.90.226.10 235 296 3.3E-59 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Gene3D G3DSA:3.90.226.10 14 201 3.3E-59 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.3E-26 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 7.5E-6 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.5E-60 T 21-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3899 066d1007f34c8e027e2415375741ce4e 729 Gene3D G3DSA:3.40.50.720 304 497 6.2E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3899 066d1007f34c8e027e2415375741ce4e 729 SUPERFAMILY SSF48179 622 714 2.98E-23 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_3392 978c9aa998d2b633eca9791d67944580 309 PANTHER PTHR11135 1 291 8.4E-149 T 21-04-2016 SDY_3392 978c9aa998d2b633eca9791d67944580 309 Pfam PF04055 Radical SAM superfamily 43 202 1.6E-14 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_3392 978c9aa998d2b633eca9791d67944580 309 Gene3D G3DSA:3.80.30.20 22 231 7.3E-33 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SDY_3392 978c9aa998d2b633eca9791d67944580 309 SUPERFAMILY SSF102114 13 254 1.57E-44 T 21-04-2016 SDY_3392 978c9aa998d2b633eca9791d67944580 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.1E-141 T 21-04-2016 IPR005911 Protein YhcC-like GO:0051536 SDY_3392 978c9aa998d2b633eca9791d67944580 309 SMART SM00729 23 247 3.4E-41 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_3392 978c9aa998d2b633eca9791d67944580 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 2.9E-17 T 21-04-2016 IPR032432 Radical SAM, C-terminal extension SDY_3392 978c9aa998d2b633eca9791d67944580 309 PANTHER PTHR11135:SF1 1 291 8.4E-149 T 21-04-2016 IPR005911 Protein YhcC-like GO:0051536 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.460.10 194 340 4.4E-50 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.10.20.30 406 467 5.9E-26 T 21-04-2016 IPR012675 Beta-grasp domain SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13328 HD domain 44 191 3.6E-40 T 21-04-2016 IPR003607 HD/PDEase domain SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Pfam PF02824 TGS domain 406 465 2.6E-21 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF109604 27 207 3.77E-45 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.70.260 664 739 8.2E-29 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.8E-36 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 SMART SM00954 251 361 8.7E-66 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 PANTHER PTHR21262:SF5 55 743 0.0 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81271 399 465 5.07E-22 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 PANTHER PTHR21262 55 743 0.0 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 2.1E-186 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF55021 665 741 1.76E-14 T 21-04-2016 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13291 ACT domain 664 740 6.7E-18 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_3001 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81301 196 410 1.41E-63 T 21-04-2016 SDY_1074 85edfc52c94b531d80e5eba1a751c334 134 Gene3D G3DSA:3.10.350.10 80 127 1.3E-4 T 21-04-2016 IPR018392 LysM domain SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 PANTHER PTHR10094 1 144 7.4E-79 T 21-04-2016 SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 SUPERFAMILY SSF55718 42 137 5.42E-22 T 21-04-2016 IPR003033 SCP2 sterol-binding domain SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 1.4E-17 T 21-04-2016 IPR003033 SCP2 sterol-binding domain SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 PIRSF PIRSF025550 1 173 1.5E-83 T 21-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 PANTHER PTHR10094:SF16 1 144 7.4E-79 T 21-04-2016 SDY_3336 2c78583efca34b5bfbb69d2a36d4f27d 174 Gene3D G3DSA:3.30.1050.10 58 135 3.1E-12 T 21-04-2016 IPR003033 SCP2 sterol-binding domain SDY_1916 132d94953ba94db60f3af198ba647026 197 SMART SM00857 2 136 2.1E-62 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 Gene3D G3DSA:3.40.50.1390 3 119 3.4E-45 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 SUPERFAMILY SSF53041 2 136 4.84E-47 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 6.0E-15 T 21-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 Gene3D G3DSA:1.10.10.60 138 186 1.1E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1916 132d94953ba94db60f3af198ba647026 197 SUPERFAMILY SSF46689 138 185 1.25E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1916 132d94953ba94db60f3af198ba647026 197 PANTHER PTHR30461 1 192 9.6E-57 T 21-04-2016 SDY_1916 132d94953ba94db60f3af198ba647026 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_1916 132d94953ba94db60f3af198ba647026 197 Pfam PF00239 Resolvase, N terminal domain 3 135 2.7E-47 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_4453 fbf2adcf244d6c356f90178873c123b8 184 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 3.2E-91 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ SDY_4453 fbf2adcf244d6c356f90178873c123b8 184 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 2.1E-74 T 21-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.855 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 Pfam PF01121 Dephospho-CoA kinase 3 177 1.4E-77 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 SUPERFAMILY SSF52540 1 190 3.79E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 Gene3D G3DSA:3.40.50.300 2 199 1.7E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 PANTHER PTHR10695 1 195 2.1E-81 T 21-04-2016 SDY_0133 a298a24b75c6cca43bd5aa7079e218e8 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.5E-72 T 21-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Gene3D G3DSA:1.10.101.10 314 357 1.9E-22 T 21-04-2016 IPR002477 Peptidoglycan binding-like SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Gene3D G3DSA:1.10.101.10 234 271 1.9E-22 T 21-04-2016 IPR002477 Peptidoglycan binding-like SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Pfam PF01471 Putative peptidoglycan binding domain 315 348 5.8E-7 T 21-04-2016 IPR002477 Peptidoglycan binding-like SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582:SF10 54 253 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582:SF10 313 432 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582:SF10 468 615 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Gene3D G3DSA:2.40.440.10 486 534 1.5E-14 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Gene3D G3DSA:2.40.440.10 370 419 1.5E-14 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582 54 253 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582 313 432 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 PANTHER PTHR30582 468 615 1.1E-285 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 Pfam PF03734 L,D-transpeptidase catalytic domain 377 543 9.6E-30 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 SUPERFAMILY SSF47090 313 356 2.67E-9 T 21-04-2016 IPR002477 Peptidoglycan binding-like SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 SUPERFAMILY SSF141523 375 428 6.41E-20 T 21-04-2016 SDY_2332 ecac0cd5bbda676fb31f7342d552a0ac 615 SUPERFAMILY SSF141523 484 533 6.41E-20 T 21-04-2016 SDY_2033 841fb4687c50af08572d27e38bb8b973 233 Pfam PF00005 ABC transporter 25 173 3.0E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2033 841fb4687c50af08572d27e38bb8b973 233 SUPERFAMILY SSF52540 5 224 6.3E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2033 841fb4687c50af08572d27e38bb8b973 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.0E-113 T 21-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 SDY_2033 841fb4687c50af08572d27e38bb8b973 233 PANTHER PTHR24220:SF111 7 226 8.0E-134 T 21-04-2016 SDY_2033 841fb4687c50af08572d27e38bb8b973 233 Gene3D G3DSA:3.40.50.300 5 226 4.3E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2033 841fb4687c50af08572d27e38bb8b973 233 PANTHER PTHR24220 7 226 8.0E-134 T 21-04-2016 SDY_2033 841fb4687c50af08572d27e38bb8b973 233 SMART SM00382 34 222 5.7E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2033 841fb4687c50af08572d27e38bb8b973 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 52.381 T 21-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 SUPERFAMILY SSF53448 244 532 3.09E-25 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 PANTHER PTHR10587:SF63 467 742 2.5E-164 T 21-04-2016 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 PANTHER PTHR10587:SF63 149 418 2.5E-164 T 21-04-2016 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 PANTHER PTHR10587 467 742 2.5E-164 T 21-04-2016 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 PANTHER PTHR10587 149 418 2.5E-164 T 21-04-2016 SDY_2301 b2192e5c0ecdeb2e7d44c3f12964d878 847 Pfam PF00535 Glycosyl transferase family 2 246 428 3.2E-22 T 21-04-2016 IPR001173 Glycosyltransferase 2-like SDY_1624 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 Gene3D G3DSA:3.30.70.900 1 90 1.3E-27 T 21-04-2016 SDY_1624 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.3E-16 T 21-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SDY_1624 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 PANTHER PTHR33336:SF1 1 96 3.5E-56 T 21-04-2016 SDY_1624 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 PANTHER PTHR33336 1 96 3.5E-56 T 21-04-2016 SDY_1624 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 SUPERFAMILY SSF54909 1 94 2.56E-25 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 Pfam PF12798 4Fe-4S binding domain 90 110 0.034 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 48 59 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 Gene3D G3DSA:3.30.70.20 55 126 1.1E-15 T 21-04-2016 SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 SUPERFAMILY SSF54862 13 129 1.12E-32 T 21-04-2016 SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 PANTHER PTHR11938:SF111 4 117 8.0E-52 T 21-04-2016 SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 Pfam PF13247 4Fe-4S dicluster domain 14 63 1.9E-8 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 Gene3D G3DSA:3.30.70.20 19 54 3.8E-20 T 21-04-2016 SDY_2910 d53f07c7dfe1df5212002ce10eb8a7f0 134 PANTHER PTHR11938 4 117 8.0E-52 T 21-04-2016 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 PANTHER PTHR14911 3 417 3.2E-289 T 21-04-2016 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 7.9E-147 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 SUPERFAMILY SSF52821 399 481 2.74E-9 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 1.7E-40 T 21-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-37 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 Gene3D G3DSA:3.40.250.10 407 480 1.4E-7 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 SUPERFAMILY SSF52402 174 372 7.28E-42 T 21-04-2016 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 231.883 T 21-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 Pfam PF02926 THUMP domain 28 161 2.0E-28 T 21-04-2016 IPR004114 THUMP domain GO:0003723 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 SUPERFAMILY SSF143437 1 173 3.49E-51 T 21-04-2016 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 SMART SM00981 75 165 1.5E-26 T 21-04-2016 IPR004114 THUMP domain GO:0003723 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-81 T 21-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SDY_0307 e1924f3eb5974fde386901182d1b8d3d 482 PANTHER PTHR14911:SF15 3 417 3.2E-289 T 21-04-2016 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 21-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 PANTHER PTHR13501 1 109 6.2E-54 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 21-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.3E-34 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SDY_3491 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-43 T 21-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 SUPERFAMILY SSF53649 1 114 1.7E-69 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 SUPERFAMILY SSF53649 236 406 1.7E-69 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.023 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 PIRSF PIRSF001491 1 407 4.8E-165 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 3.5E-210 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 Gene3D G3DSA:3.30.70.1250 114 235 4.2E-53 T 21-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 SUPERFAMILY SSF143856 117 235 3.14E-50 T 21-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 PANTHER PTHR21110 2 407 4.6E-166 T 21-04-2016 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 Pfam PF01676 Metalloenzyme superfamily 2 398 6.5E-47 T 21-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 Gene3D G3DSA:3.40.720.10 240 405 2.0E-72 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 Gene3D G3DSA:3.40.720.10 1 113 2.0E-72 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4643 fe0b0995d00aa48b12f32b4a2c915bb1 407 PANTHER PTHR21110:SF0 2 407 4.6E-166 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 SUPERFAMILY SSF55021 303 381 1.68E-22 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Pfam PF00696 Amino acid kinase family 2 284 2.1E-45 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 PIRSF PIRSF000727 1 818 0.0 T 21-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Gene3D G3DSA:3.30.360.10 636 792 7.9E-57 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 7.9E-152 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Gene3D G3DSA:3.40.1160.10 1 49 1.1E-67 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Gene3D G3DSA:3.40.1160.10 111 300 1.1E-67 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 SUPERFAMILY SSF51735 464 636 3.95E-40 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Gene3D G3DSA:3.40.50.720 464 635 3.9E-67 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 SUPERFAMILY SSF53633 1 296 2.23E-72 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 21-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Pfam PF13840 ACT domain 393 453 5.5E-9 T 21-04-2016 IPR027795 GATS-like ACT domain SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.4E-33 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Pfam PF00742 Homoserine dehydrogenase 614 811 2.1E-48 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 SUPERFAMILY SSF55347 614 798 2.68E-52 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 PANTHER PTHR21499 1 471 1.3E-187 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 SUPERFAMILY SSF55021 383 476 3.02E-22 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 PANTHER PTHR21499:SF1 1 471 1.3E-187 T 21-04-2016 SDY_0002 9284ee2c6f2461315af6eb886df589fe 820 Pfam PF01842 ACT domain 324 376 7.1E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 305 6.2E-207 T 21-04-2016 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.286 T 21-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 3.6E-103 T 21-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 SUPERFAMILY SSF56281 1 304 4.06E-88 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 Gene3D G3DSA:3.60.15.10 3 305 7.4E-84 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 Pfam PF12706 Beta-lactamase superfamily domain 36 154 7.8E-9 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 Pfam PF12706 Beta-lactamase superfamily domain 203 270 1.0E-6 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 PANTHER PTHR12553 1 152 2.7E-93 T 21-04-2016 SDY_2464 f5bcb0be23b1297763a3039dc8b54c78 305 PANTHER PTHR12553 183 305 2.7E-93 T 21-04-2016 SDY_1048 c22a9d9ba002d137005c268d4fcea1ea 305 Pfam PF05661 Protein of unknown function (DUF808) 6 291 1.3E-113 T 21-04-2016 IPR008526 Inner membrane protein YedI SDY_1048 c22a9d9ba002d137005c268d4fcea1ea 305 PANTHER PTHR30503 4 303 1.5E-105 T 21-04-2016 SDY_1048 c22a9d9ba002d137005c268d4fcea1ea 305 PIRSF PIRSF016660 3 305 1.2E-125 T 21-04-2016 IPR008526 Inner membrane protein YedI SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 9.9E-134 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PANTHER PTHR13789 1 399 8.1E-192 T 21-04-2016 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PANTHER PTHR13789:SF5 1 399 8.1E-192 T 21-04-2016 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 Gene3D G3DSA:3.50.50.60 3 182 7.3E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 Gene3D G3DSA:3.50.50.60 269 357 7.3E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 Pfam PF01494 FAD binding domain 4 345 2.2E-30 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 SUPERFAMILY SSF51905 4 177 2.84E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 SUPERFAMILY SSF51905 268 385 2.84E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.6E-20 T 21-04-2016 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.6E-20 T 21-04-2016 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.6E-20 T 21-04-2016 SDY_3175 65d69e989a1d62779ea72fc4ee0f0a9c 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-20 T 21-04-2016 SDY_0779 6ca53093170c0a4b85755531a30df794 155 Gene3D G3DSA:1.10.10.10 36 103 8.1E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0779 6ca53093170c0a4b85755531a30df794 155 SUPERFAMILY SSF47979 95 150 5.1E-14 T 21-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SDY_0779 6ca53093170c0a4b85755531a30df794 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.1E-10 T 21-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SDY_0779 6ca53093170c0a4b85755531a30df794 155 PANTHER PTHR33238 35 143 3.5E-22 T 21-04-2016 SDY_0779 6ca53093170c0a4b85755531a30df794 155 Gene3D G3DSA:1.10.60.10 107 150 2.1E-19 T 21-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SDY_0779 6ca53093170c0a4b85755531a30df794 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 7.7E-14 T 21-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SDY_0779 6ca53093170c0a4b85755531a30df794 155 SUPERFAMILY SSF46785 48 117 1.9E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0779 6ca53093170c0a4b85755531a30df794 155 SMART SM00529 56 155 1.1E-43 T 21-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SDY_0779 6ca53093170c0a4b85755531a30df794 155 PANTHER PTHR33238:SF1 35 143 3.5E-22 T 21-04-2016 SDY_1422 b13138e564d1433a564f3d3e7794bed6 268 SUPERFAMILY SSF53098 65 229 2.28E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1422 b13138e564d1433a564f3d3e7794bed6 268 Pfam PF00665 Integrase core domain 72 186 2.7E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1422 b13138e564d1433a564f3d3e7794bed6 268 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1422 b13138e564d1433a564f3d3e7794bed6 268 Pfam PF13276 HTH-like domain 5 47 8.7E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_1422 b13138e564d1433a564f3d3e7794bed6 268 PANTHER PTHR32552 2 235 3.2E-63 T 21-04-2016 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 PANTHER PTHR30175 1 466 2.9E-261 T 21-04-2016 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 Pfam PF02378 Phosphotransferase system, EIIC 113 405 5.5E-32 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 PANTHER PTHR30175:SF4 1 466 2.9E-261 T 21-04-2016 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 Gene3D G3DSA:3.30.1360.60 8 83 2.4E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 Pfam PF00367 phosphotransferase system, EIIB 13 40 1.1E-10 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 31 112 8.3E-21 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 SUPERFAMILY SSF55604 11 81 3.92E-18 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_4259 5a663f69abb78c413c7d987ce8320c3e 473 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 461 7.0E-223 T 21-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.609 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.0E-105 T 21-04-2016 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PANTHER PTHR18895 10 290 2.0E-175 T 21-04-2016 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 SUPERFAMILY SSF53335 42 291 4.7E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PANTHER PTHR18895:SF69 10 290 2.0E-175 T 21-04-2016 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 5.9E-128 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Gene3D G3DSA:3.40.50.150 98 286 3.0E-41 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3436 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PIRSF PIRSF000401 1 293 4.8E-94 T 21-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SDY_0485 715a253583183821669e160cbdce95fb 247 PANTHER PTHR30433 53 247 1.1E-69 T 21-04-2016 SDY_0485 715a253583183821669e160cbdce95fb 247 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 165 182 - T 21-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SDY_0485 715a253583183821669e160cbdce95fb 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 94 197 3.0E-10 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SDY_0485 715a253583183821669e160cbdce95fb 247 PANTHER PTHR30433:SF4 53 247 1.1E-69 T 21-04-2016 IPR022522 Flagellar motor stator, MotA SDY_1010 5f422a5cdc6191ce87b5650e8d4e0d8d 125 SUPERFAMILY SSF143737 8 118 2.09E-55 T 21-04-2016 SDY_1010 5f422a5cdc6191ce87b5650e8d4e0d8d 125 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.3E-52 T 21-04-2016 IPR009320 YagB/YeeU/YfjZ SDY_1010 5f422a5cdc6191ce87b5650e8d4e0d8d 125 Gene3D G3DSA:3.30.450.20 27 124 3.0E-60 T 21-04-2016 SDY_0681 b665739115a110c02f2dd9d463c6ec4f 379 PIRSF PIRSF000267 2 378 3.0E-135 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_0681 b665739115a110c02f2dd9d463c6ec4f 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 3.7E-208 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_0681 b665739115a110c02f2dd9d463c6ec4f 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.3E-111 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_0681 b665739115a110c02f2dd9d463c6ec4f 379 PANTHER PTHR30365:SF6 1 379 3.8E-201 T 21-04-2016 SDY_0681 b665739115a110c02f2dd9d463c6ec4f 379 PANTHER PTHR30365 1 379 3.8E-201 T 21-04-2016 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 PANTHER PTHR14359:SF20 1 406 1.5E-202 T 21-04-2016 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 PANTHER PTHR14359 1 406 1.5E-202 T 21-04-2016 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 Gene3D G3DSA:3.40.50.1950 3 182 9.1E-63 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 Gene3D G3DSA:3.40.50.10300 184 404 1.9E-87 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 SUPERFAMILY SSF102645 184 401 1.44E-79 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 3.8E-73 T 21-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 Pfam PF02441 Flavoprotein 6 133 1.8E-30 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 SUPERFAMILY SSF52507 3 180 4.32E-58 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_4069 58a13e0f052c8a257983900d03994d7a 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 4.5E-165 T 21-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 18 185 3.2E-70 T 21-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 PANTHER PTHR11019 15 181 5.5E-78 T 21-04-2016 SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 Pfam PF01965 DJ-1/PfpI family 17 181 1.0E-55 T 21-04-2016 IPR002818 DJ-1/PfpI SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 SUPERFAMILY SSF52317 17 184 1.67E-46 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 PANTHER PTHR11019:SF115 15 181 5.5E-78 T 21-04-2016 SDY_3332 658737e5752746e1e69fef96f11d8a1e 186 Gene3D G3DSA:3.40.50.880 10 184 3.2E-53 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 2.1E-20 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 Gene3D G3DSA:3.40.50.300 13 276 8.2E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 SMART SM00382 48 254 2.3E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 7.4E-25 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 SUPERFAMILY SSF52540 49 316 3.0E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 Pfam PF00005 ABC transporter 40 196 5.2E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 PANTHER PTHR24220 21 330 3.2E-163 T 21-04-2016 SDY_1304 d8615bf54c6b35ce4dc23e0c6f4f4b73 337 PANTHER PTHR24220:SF535 21 330 3.2E-163 T 21-04-2016 SDY_3405 aedae341c154d8e960d70a87b656a21a 212 PANTHER PTHR11260:SF44 9 208 5.0E-124 T 21-04-2016 SDY_3405 aedae341c154d8e960d70a87b656a21a 212 Gene3D G3DSA:1.20.1050.10 102 208 1.6E-17 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3405 aedae341c154d8e960d70a87b656a21a 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 7.2E-13 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal SDY_3405 aedae341c154d8e960d70a87b656a21a 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.5E-20 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_3405 aedae341c154d8e960d70a87b656a21a 212 PANTHER PTHR11260 9 208 5.0E-124 T 21-04-2016 SDY_3405 aedae341c154d8e960d70a87b656a21a 212 SUPERFAMILY SSF47616 82 208 8.81E-27 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3405 aedae341c154d8e960d70a87b656a21a 212 Gene3D G3DSA:3.40.30.10 7 101 1.8E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3405 aedae341c154d8e960d70a87b656a21a 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 5.0E-246 T 21-04-2016 IPR033186 Helicase HerA-like C-terminal SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 Gene3D G3DSA:3.40.50.300 16 108 1.1E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 Gene3D G3DSA:3.40.50.300 204 380 1.1E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 PANTHER PTHR30121 21 441 9.3E-187 T 21-04-2016 SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 SUPERFAMILY SSF52540 13 369 3.25E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4287 5e68b3aacc04fbbfa80e4fecb40deec0 500 PANTHER PTHR30121:SF3 21 441 9.3E-187 T 21-04-2016 SDY_2700 adeea45293026b353815658fa318dfba 301 Gene3D G3DSA:3.30.420.10 119 282 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2700 adeea45293026b353815658fa318dfba 301 SUPERFAMILY SSF53098 125 291 8.09E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2700 adeea45293026b353815658fa318dfba 301 Pfam PF00665 Integrase core domain 124 243 2.1E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2700 adeea45293026b353815658fa318dfba 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3728 7b21751fde710ae53aa63143b3eceea4 223 Pfam PF04493 Endonuclease V 12 206 3.5E-73 T 21-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SDY_3728 7b21751fde710ae53aa63143b3eceea4 223 PANTHER PTHR28511 3 223 2.4E-89 T 21-04-2016 SDY_3728 7b21751fde710ae53aa63143b3eceea4 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.488 T 21-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 SDY_3728 7b21751fde710ae53aa63143b3eceea4 223 PANTHER PTHR28511:SF1 3 223 2.4E-89 T 21-04-2016 SDY_2560 4d73c63caaaf3c1c494b40d310f6954a 72 PANTHER PTHR30354 1 72 5.1E-53 T 21-04-2016 SDY_2560 4d73c63caaaf3c1c494b40d310f6954a 72 Pfam PF02447 GntP family permease 2 71 2.6E-21 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_2560 4d73c63caaaf3c1c494b40d310f6954a 72 PANTHER PTHR30354:SF6 1 72 5.1E-53 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 Gene3D G3DSA:3.90.25.10 193 344 7.9E-20 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 PANTHER PTHR10366:SF409 310 349 5.3E-210 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 PANTHER PTHR10366:SF409 14 293 5.3E-210 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 Pfam PF01370 NAD dependent epimerase/dehydratase family 15 246 1.8E-26 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SDY_2395 52170e747a52245ce487066557714222 349 Gene3D G3DSA:3.40.50.720 13 192 7.5E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2395 52170e747a52245ce487066557714222 349 PANTHER PTHR10366 310 349 5.3E-210 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 PANTHER PTHR10366 14 293 5.3E-210 T 21-04-2016 SDY_2395 52170e747a52245ce487066557714222 349 SUPERFAMILY SSF51735 12 282 2.29E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2395 52170e747a52245ce487066557714222 349 SUPERFAMILY SSF51735 310 347 2.29E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2110 7de515daa8df4b4fba2378e7f496f93d 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_2110 7de515daa8df4b4fba2378e7f496f93d 489 PIRSF PIRSF006060 1 488 8.7E-78 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2110 7de515daa8df4b4fba2378e7f496f93d 489 Pfam PF00324 Amino acid permease 21 476 3.7E-147 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_2110 7de515daa8df4b4fba2378e7f496f93d 489 PANTHER PTHR11785:SF204 6 488 6.9E-228 T 21-04-2016 SDY_2110 7de515daa8df4b4fba2378e7f496f93d 489 PANTHER PTHR11785 6 488 6.9E-228 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Gene3D G3DSA:3.20.20.60 420 736 2.3E-100 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 1.3E-109 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 SUPERFAMILY SSF51621 419 715 1.33E-96 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 3.0E-125 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 3.5E-15 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 4.8E-23 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Pfam PF01590 GAF domain 18 152 1.0E-14 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 SUPERFAMILY SSF52009 293 413 1.57E-25 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PANTHER PTHR22931:SF23 1 716 0.0 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 SUPERFAMILY SSF47831 200 309 1.96E-25 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 1.2E-24 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 1.2E-24 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-24 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 1.2E-24 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 SUPERFAMILY SSF55781 2 159 3.27E-30 T 21-04-2016 IPR029016 GAF domain-like SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Gene3D G3DSA:3.30.450.40 1 160 1.1E-46 T 21-04-2016 IPR029016 GAF domain-like SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 SMART SM00065 17 164 8.2E-29 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 PANTHER PTHR22931 1 716 0.0 T 21-04-2016 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Gene3D G3DSA:1.10.274.10 197 300 3.2E-32 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3046 b8da28c1ff05f9a47675068171b466a5 748 Gene3D G3DSA:3.50.30.10 301 414 3.5E-29 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 Gene3D G3DSA:1.10.730.10 582 678 1.7E-4 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 SUPERFAMILY SSF109604 339 511 1.26E-16 T 21-04-2016 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.9E-8 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.18 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PANTHER PTHR30075 1 689 0.0 T 21-04-2016 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.1E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.1E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.1E-37 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4345 548c85aaf6b2e499b575ee8fbd08cc97 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.1E-214 T 21-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 PRINTS PR00112 Acylphosphatase signature 61 81 3.0E-8 T 21-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 PRINTS PR00112 Acylphosphatase signature 26 51 3.0E-8 T 21-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 PRINTS PR00112 Acylphosphatase signature 5 20 3.0E-8 T 21-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 PANTHER PTHR10029 2 92 1.7E-39 T 21-04-2016 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 32.13 T 21-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 Gene3D G3DSA:3.30.70.100 5 92 6.1E-33 T 21-04-2016 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 Pfam PF00708 Acylphosphatase 8 92 9.4E-27 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0943 cd83cab5cc9df4753f5e7611f601ecab 92 SUPERFAMILY SSF54975 2 92 7.41E-31 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.40.50.20 3 108 1.4E-46 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.40.50.20 539 663 9.8E-62 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.354 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF48108 396 554 1.83E-52 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.30.1490.20 141 199 6.7E-28 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-63 T 21-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.30.470.20 746 933 1.1E-81 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.30.470.20 200 399 5.1E-76 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.162 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.9E-40 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SMART SM00851 956 1042 7.0E-30 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Pfam PF02142 MGS-like domain 957 1041 3.1E-18 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PANTHER PTHR11405 1 1073 0.0 T 21-04-2016 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.40.50.1380 939 1072 2.9E-39 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF52440 1 127 2.3E-50 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 3.5E-38 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-77 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:3.30.1490.20 687 745 1.3E-25 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SMART SM01096 424 547 2.5E-73 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 21-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 PANTHER PTHR11405:SF5 1 1073 0.0 T 21-04-2016 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF52440 557 676 6.04E-49 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF56059 674 934 1.61E-104 T 21-04-2016 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF56059 128 401 1.33E-109 T 21-04-2016 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 Gene3D G3DSA:1.10.1030.10 400 538 4.4E-52 T 21-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0055 8e0587e933d248d131ea1f52514e437c 1073 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 SUPERFAMILY SSF53850 105 291 2.39E-55 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Pfam PF01817 Chorismate mutase type II 11 89 2.0E-15 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 21-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Gene3D G3DSA:1.20.59.10 1 106 8.9E-45 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Gene3D G3DSA:3.30.70.260 294 378 3.2E-25 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 PIRSF PIRSF001500 1 380 3.5E-143 T 21-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 SUPERFAMILY SSF48600 6 93 1.78E-21 T 21-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 2.7E-40 T 21-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Gene3D G3DSA:3.40.190.10 194 268 2.9E-28 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 SMART SM00830 11 91 1.1E-22 T 21-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Pfam PF00800 Prephenate dehydratase 106 286 4.1E-61 T 21-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 Gene3D G3DSA:3.40.190.10 107 193 5.8E-33 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 PANTHER PTHR21022 4 379 9.8E-161 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 PANTHER PTHR21022:SF0 4 379 9.8E-161 T 21-04-2016 SDY_2767 ed265ce3c43d2a813376c365f8078fc4 386 SUPERFAMILY SSF55021 280 377 1.68E-21 T 21-04-2016 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.0E-241 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 449 520 3.7E-22 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 19 87 6.8E-5 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 190 260 2.8E-28 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 103 171 8.3E-9 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 275 347 2.2E-27 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SMART SM00316 362 434 3.4E-21 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PANTHER PTHR10724:SF6 1 514 2.5E-281 T 21-04-2016 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 347 439 3.66E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 429 533 3.51E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 360 439 5.8E-25 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 1 112 9.43E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PANTHER PTHR10724 1 514 2.5E-281 T 21-04-2016 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 448 521 8.3E-21 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 102 172 1.0E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 20 78 7.6E-7 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 361 434 9.3E-22 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 104 171 3.1E-9 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Pfam PF00575 S1 RNA binding domain 449 520 4.5E-18 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 255 367 6.22E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 21 101 1.3E-10 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 279 359 3.9E-30 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 Gene3D G3DSA:2.40.50.140 192 278 6.7E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 SUPERFAMILY SSF50249 106 185 5.01E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2347 93e8d3dbfb179b767ed50dfd9d9115dc 557 PIRSF PIRSF002111 1 533 7.7E-221 T 21-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 PIRSF PIRSF002096 1 134 1.0E-55 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 Gene3D G3DSA:1.10.287.1050 1 58 3.9E-23 T 21-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 PANTHER PTHR38097:SF2 2 134 3.2E-78 T 21-04-2016 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 SUPERFAMILY SSF81273 92 134 1.06E-11 T 21-04-2016 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 SMART SM00528 87 134 5.3E-27 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 Pfam PF00816 H-NS histone family 38 128 6.2E-20 T 21-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 PANTHER PTHR38097 2 134 3.2E-78 T 21-04-2016 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 SUPERFAMILY SSF81273 3 58 2.94E-18 T 21-04-2016 SDY_2859 a8caa264b5687bad9e7a13fb2c1eb459 134 Gene3D G3DSA:4.10.430.10 91 134 3.1E-26 T 21-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 SDY_2393 226c7254eac36f79e2a33d6313f52933 333 PANTHER PTHR10289 1 333 1.1E-155 T 21-04-2016 SDY_2393 226c7254eac36f79e2a33d6313f52933 333 Gene3D G3DSA:3.40.640.10 1 245 1.4E-87 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2393 226c7254eac36f79e2a33d6313f52933 333 Gene3D G3DSA:3.90.1150.10 246 332 3.2E-25 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2393 226c7254eac36f79e2a33d6313f52933 333 SUPERFAMILY SSF53383 1 331 7.07E-113 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2393 226c7254eac36f79e2a33d6313f52933 333 Pfam PF01212 Beta-eliminating lyase 3 282 7.2E-96 T 21-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 SDY_2393 226c7254eac36f79e2a33d6313f52933 333 PIRSF PIRSF017617 1 333 1.3E-128 T 21-04-2016 IPR023603 Threonine aldolase SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 PANTHER PTHR24222 1 571 1.8E-273 T 21-04-2016 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 SUPERFAMILY SSF90123 7 327 1.57E-41 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.4E-181 T 21-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 Gene3D G3DSA:1.20.1560.10 8 327 3.5E-30 T 21-04-2016 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 Pfam PF00005 ABC transporter 356 502 2.6E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 Pfam PF00664 ABC transporter transmembrane region 58 287 1.8E-10 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 SUPERFAMILY SSF52540 333 569 2.41E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 SMART SM00382 365 549 4.1E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 PANTHER PTHR24222:SF30 1 571 1.8E-273 T 21-04-2016 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2375 5b6277c5800084be28dc2e300c32dbe6 573 Gene3D G3DSA:3.40.50.300 339 568 1.1E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 SUPERFAMILY SSF56821 1 548 1.53E-189 T 21-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Gene3D G3DSA:3.40.50.2030 234 379 1.1E-64 T 21-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Gene3D G3DSA:1.20.1270.20 159 232 4.3E-26 T 21-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Gene3D G3DSA:1.20.1270.20 1 158 6.2E-38 T 21-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.7E-230 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Gene3D G3DSA:3.40.50.2030 380 547 1.4E-68 T 21-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 PIRSF PIRSF000076 1 550 3.1E-241 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 3.1E-156 T 21-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 PANTHER PTHR30109:SF0 1 549 0.0 T 21-04-2016 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.634 T 21-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SDY_2390 f3fd7828bdb7421746d7e94d5f370c56 550 PANTHER PTHR30109 1 549 0.0 T 21-04-2016 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 Gene3D G3DSA:3.50.50.60 7 241 3.8E-42 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 Pfam PF01266 FAD dependent oxidoreductase 10 358 8.0E-51 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 SUPERFAMILY SSF51905 9 322 6.72E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.2E-23 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 2.9E-266 T 21-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PANTHER PTHR11985 5 541 0.0 T 21-04-2016 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 PANTHER PTHR11985:SF14 5 541 0.0 T 21-04-2016 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2436 851fed4f1fa47f4e2fb6848bb04f8094 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 6.2E-10 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SDY_0377 6cfc8b3dcb4927a2f1a76bf4617c353b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0377 6cfc8b3dcb4927a2f1a76bf4617c353b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0377 6cfc8b3dcb4927a2f1a76bf4617c353b 131 Pfam PF03400 IS1 transposase 2 131 2.0E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 205 219 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 17 341 1.4E-139 T 21-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 Gene3D G3DSA:3.40.50.300 112 340 1.1E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 SUPERFAMILY SSF52540 18 340 1.63E-56 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 SMART SM00382 134 286 1.5E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 PANTHER PTHR30486:SF6 16 341 1.3E-170 T 21-04-2016 SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 PANTHER PTHR30486 16 341 1.3E-170 T 21-04-2016 SDY_3121 88547bda13460294e6a023eaa60f8eb4 341 Pfam PF00437 Type II/IV secretion system protein 89 274 3.8E-40 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SDY_P098 1048e71c41977992c63657bef76b6cd9 131 Gene3D G3DSA:1.10.3680.10 3 131 1.9E-17 T 21-04-2016 IPR029024 TerB-like SDY_P098 1048e71c41977992c63657bef76b6cd9 131 SUPERFAMILY SSF158682 2 131 2.09E-16 T 21-04-2016 IPR029024 TerB-like SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 PANTHER PTHR34220:SF2 1 558 0.0 T 21-04-2016 SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 8.3E-7 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 SUPERFAMILY SSF55781 226 345 4.21E-8 T 21-04-2016 IPR029016 GAF domain-like SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Pfam PF01590 GAF domain 228 346 1.8E-4 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 3.9E-43 T 21-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Pfam PF06580 Histidine kinase 359 438 1.1E-24 T 21-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Gene3D G3DSA:3.30.565.10 411 553 2.2E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 PANTHER PTHR34220 1 558 0.0 T 21-04-2016 SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 Gene3D G3DSA:3.30.450.40 293 347 2.0E-4 T 21-04-2016 IPR029016 GAF domain-like SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 SMART SM00387 452 554 3.5E-9 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2579 66168f4dc66a12fab91ca27d8cefdf62 565 SUPERFAMILY SSF55874 414 551 1.31E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 SUPERFAMILY SSF53850 29 369 5.2E-105 T 21-04-2016 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 8.9E-76 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PANTHER PTHR30222 26 370 2.3E-174 T 21-04-2016 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PANTHER PTHR30222:SF11 26 370 2.3E-174 T 21-04-2016 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 PIRSF PIRSF019574 1 370 9.5E-144 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 Gene3D G3DSA:3.40.190.10 151 319 1.3E-75 T 21-04-2016 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 3.0E-35 T 21-04-2016 SDY_0741 f248dbd2f4e92ed705a8ca95a2e3a01d 370 Gene3D G3DSA:3.40.190.10 27 150 5.2E-12 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:1.10.3170.10 155 349 2.3E-72 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 SUPERFAMILY SSF52980 899 1174 3.22E-96 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Pfam PF13361 UvrD-like helicase C-terminal domain 442 808 1.4E-16 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Pfam PF12705 PD-(D/E)XK nuclease superfamily 950 1150 9.5E-6 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:1.10.486.10 583 728 4.0E-58 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070 794 1168 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070 300 774 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070 1 89 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070 118 215 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.40.50.300 450 580 3.1E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.40.50.300 729 882 3.1E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.90.320.10 890 1177 1.2E-108 T 21-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.40.50.300 120 150 1.1E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.40.50.300 14 82 1.1E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Gene3D G3DSA:3.40.50.300 351 449 1.1E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1173 15.233 T 21-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 SUPERFAMILY SSF52540 325 825 2.2E-108 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 SUPERFAMILY SSF52540 14 80 2.2E-108 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 SUPERFAMILY SSF52540 118 202 2.2E-108 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 437 3.4E-70 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070:SF23 794 1168 0.0 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070:SF23 300 774 0.0 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070:SF23 1 89 0.0 T 21-04-2016 SDY_3037 2ace338a62ae753b22e37c8b8d6fe3af 1180 PANTHER PTHR11070:SF23 118 215 0.0 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 SUPERFAMILY SSF55804 567 706 3.53E-28 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 58 555 8.6E-145 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Gene3D G3DSA:3.50.30.10 123 243 1.1E-30 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 174 185 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 SUPERFAMILY SSF52009 114 233 5.23E-25 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Gene3D G3DSA:1.10.274.10 26 122 1.1E-17 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 437 455 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Gene3D G3DSA:3.20.20.60 248 558 2.3E-102 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 454 469 1.8E-20 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 283 302 1.8E-20 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 437 452 1.8E-20 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 490 502 1.8E-20 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 SUPERFAMILY SSF47831 24 132 2.88E-18 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PANTHER PTHR22931:SF24 47 540 0.0 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Pfam PF05524 PEP-utilising enzyme, N-terminal 22 115 4.7E-11 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Pfam PF00391 PEP-utilising enzyme, mobile domain 142 215 1.0E-15 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 567 707 1.6E-29 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Gene3D G3DSA:3.40.930.10 566 708 8.4E-40 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 SUPERFAMILY SSF51621 244 539 1.39E-97 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 PANTHER PTHR22931 47 540 0.0 T 21-04-2016 SDY_3782 3b3da4e3498b18003b4da4d580c8838a 711 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 241 531 8.8E-114 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.48 T 21-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 Pfam PF02540 NAD synthase 23 265 4.2E-81 T 21-04-2016 IPR022310 NAD/GMP synthase SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 PANTHER PTHR23090:SF7 1 274 7.7E-172 T 21-04-2016 SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 PANTHER PTHR23090 1 274 7.7E-172 T 21-04-2016 SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 SUPERFAMILY SSF52402 3 273 5.59E-87 T 21-04-2016 SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 Gene3D G3DSA:3.40.50.620 4 269 1.2E-67 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1540 71aa9ce9113be53909d0dfe2e2a6a638 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 16 275 2.2E-87 T 21-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 3.6E-70 T 21-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 Gene3D G3DSA:3.30.70.940 2 96 4.5E-17 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.2E-19 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 Gene3D G3DSA:2.30.30.30 112 138 8.5E-4 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 PANTHER PTHR30265 1 158 1.1E-30 T 21-04-2016 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 PANTHER PTHR30265:SF3 1 158 1.1E-30 T 21-04-2016 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 SMART SM00738 1 100 1.1E-33 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 SUPERFAMILY SSF82679 1 96 1.26E-27 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3903 715f6a36cd2c3556526a6e82f0038c29 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.194 T 21-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 175 203 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 PANTHER PTHR11496:SF77 1 383 2.5E-226 T 21-04-2016 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 Gene3D G3DSA:3.40.50.1970 1 186 2.7E-58 T 21-04-2016 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 Gene3D G3DSA:1.20.1090.10 187 383 1.1E-72 T 21-04-2016 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 PANTHER PTHR11496 1 383 2.5E-226 T 21-04-2016 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 5.3E-117 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 SUPERFAMILY SSF56796 8 383 1.57E-124 T 21-04-2016 SDY_3016 53d0f6d251cfd369567d3943f0e4d118 383 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 379 6.0E-200 T 21-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.0E-13 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 1.0E-13 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 1.0E-13 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.0E-13 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 SUPERFAMILY SSF51905 5 301 4.54E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PANTHER PTHR22912 5 367 9.4E-170 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.3E-50 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 4.2E-19 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 4.2E-19 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.2E-19 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.2E-19 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 4.2E-19 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 56.22 T 21-04-2016 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 UniPathway: UPA00638 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 PANTHER PTHR22912:SF130 5 367 9.4E-170 T 21-04-2016 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 Gene3D G3DSA:3.50.50.60 4 104 1.1E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2908 16eadac90886b74e856a677cdc5b668c 377 Gene3D G3DSA:3.50.50.60 105 300 9.9E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3097 d91adfa4afd671492c02b5b83fc2137f 176 Pfam PF12019 Type II transport protein GspH 29 164 7.6E-10 T 21-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SDY_3097 d91adfa4afd671492c02b5b83fc2137f 176 SUPERFAMILY SSF54523 1 85 2.35E-5 T 21-04-2016 SDY_3097 d91adfa4afd671492c02b5b83fc2137f 176 Gene3D G3DSA:3.55.40.10 26 175 3.5E-42 T 21-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SUPERFAMILY SSF52540 546 853 7.34E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SMART SM00382 597 752 2.2E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SMART SM00382 198 343 5.7E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SUPERFAMILY SSF52540 159 545 6.54E-99 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Gene3D G3DSA:3.40.50.300 160 341 2.3E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.0E-28 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_2835 78533d0c27f80dc6e05088a57db74702 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 21-04-2016 IPR028299 ClpA/B, conserved site 2 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.3E-55 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SUPERFAMILY SSF81923 4 156 1.29E-42 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PANTHER PTHR11638:SF18 1 856 0.0 T 21-04-2016 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PANTHER PTHR11638 1 856 0.0 T 21-04-2016 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Gene3D G3DSA:3.40.50.300 551 777 8.0E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2835 78533d0c27f80dc6e05088a57db74702 857 SMART SM01086 766 855 1.2E-37 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_2835 78533d0c27f80dc6e05088a57db74702 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 21-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.0E-13 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.7E-13 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.6E-13 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Gene3D G3DSA:1.10.8.60 778 855 2.4E-31 T 21-04-2016 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Gene3D G3DSA:1.10.8.60 343 427 2.3E-36 T 21-04-2016 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 Gene3D G3DSA:1.10.1780.10 1 147 2.7E-48 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2835 78533d0c27f80dc6e05088a57db74702 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 21-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 SUPERFAMILY SSF53850 6 224 4.34E-70 T 21-04-2016 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 Gene3D G3DSA:3.30.70.120 226 299 1.7E-31 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 Gene3D G3DSA:3.40.190.10 2 139 4.4E-54 T 21-04-2016 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.4E-24 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 PANTHER PTHR21403 3 299 1.1E-136 T 21-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 21-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.8E-57 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 1.1E-33 T 21-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.012 T 21-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 PANTHER PTHR21403:SF0 3 299 1.1E-136 T 21-04-2016 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 5.7E-48 T 21-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SDY_2222 724c532536c5fc78fe9a632a6653a91c 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 PANTHER PTHR30522:SF0 1 263 5.1E-137 T 21-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 1.8E-7 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 3.8E-28 T 21-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 SUPERFAMILY SSF101386 135 236 4.11E-24 T 21-04-2016 SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 1.6E-126 T 21-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 SUPERFAMILY SSF101386 2 105 2.18E-26 T 21-04-2016 SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 Gene3D G3DSA:1.10.287.1080 19 73 5.8E-7 T 21-04-2016 SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 Gene3D G3DSA:1.10.287.1080 131 222 2.4E-13 T 21-04-2016 SDY_2998 cc218894a7fb7838d1b75f539dd62298 263 PANTHER PTHR30522 1 263 5.1E-137 T 21-04-2016 SDY_3381 9e16eff5a04c7b0ce378fdc814bd2127 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.239 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SDY_3381 9e16eff5a04c7b0ce378fdc814bd2127 185 Gene3D G3DSA:2.60.450.10 29 163 4.9E-43 T 21-04-2016 SDY_3381 9e16eff5a04c7b0ce378fdc814bd2127 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 9.6E-52 T 21-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SDY_3381 9e16eff5a04c7b0ce378fdc814bd2127 185 PANTHER PTHR36504 1 184 2.6E-57 T 21-04-2016 SDY_3381 9e16eff5a04c7b0ce378fdc814bd2127 185 Pfam PF03968 OstA-like protein 37 149 1.6E-32 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SDY_0759 8a46eba44fb2f637f4062051641050d6 321 PANTHER PTHR10188 6 313 4.9E-136 T 21-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SDY_0759 8a46eba44fb2f637f4062051641050d6 321 PANTHER PTHR10188:SF24 6 313 4.9E-136 T 21-04-2016 SDY_0759 8a46eba44fb2f637f4062051641050d6 321 Pfam PF01112 Asparaginase 5 311 2.7E-120 T 21-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 SDY_0759 8a46eba44fb2f637f4062051641050d6 321 SUPERFAMILY SSF56235 4 309 2.37E-99 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_0015 ffcc4df7a5a5ae0cf59509c1a1c358f5 69 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 21-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 SDY_0015 ffcc4df7a5a5ae0cf59509c1a1c358f5 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 5.2E-13 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0015 ffcc4df7a5a5ae0cf59509c1a1c358f5 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 5.2E-13 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0015 ffcc4df7a5a5ae0cf59509c1a1c358f5 69 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 24 68 2.0E-5 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0015 ffcc4df7a5a5ae0cf59509c1a1c358f5 69 Pfam PF01848 Hok/gef family 25 66 3.0E-20 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_4184 b3669069e76c248d381a2eecb749187d 467 Gene3D G3DSA:3.40.50.300 122 296 4.6E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4184 b3669069e76c248d381a2eecb749187d 467 SMART SM00382 164 366 4.3E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4184 b3669069e76c248d381a2eecb749187d 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.1E-32 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SDY_4184 b3669069e76c248d381a2eecb749187d 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 21-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SDY_4184 b3669069e76c248d381a2eecb749187d 467 SUPERFAMILY SSF52540 133 343 2.22E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4184 b3669069e76c248d381a2eecb749187d 467 SMART SM00760 375 444 6.1E-45 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SDY_4184 b3669069e76c248d381a2eecb749187d 467 PANTHER PTHR30050 1 104 7.7E-250 T 21-04-2016 SDY_4184 b3669069e76c248d381a2eecb749187d 467 PANTHER PTHR30050 130 467 7.7E-250 T 21-04-2016 SDY_4184 b3669069e76c248d381a2eecb749187d 467 Gene3D G3DSA:1.10.8.60 298 365 5.6E-30 T 21-04-2016 SDY_4184 b3669069e76c248d381a2eecb749187d 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SDY_4184 b3669069e76c248d381a2eecb749187d 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 2.9E-187 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SDY_4184 b3669069e76c248d381a2eecb749187d 467 PANTHER PTHR30050:SF2 1 104 7.7E-250 T 21-04-2016 SDY_4184 b3669069e76c248d381a2eecb749187d 467 PANTHER PTHR30050:SF2 130 467 7.7E-250 T 21-04-2016 SDY_4184 b3669069e76c248d381a2eecb749187d 467 Gene3D G3DSA:1.10.1750.10 366 466 7.3E-43 T 21-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SDY_4184 b3669069e76c248d381a2eecb749187d 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_4184 b3669069e76c248d381a2eecb749187d 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_4184 b3669069e76c248d381a2eecb749187d 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_4184 b3669069e76c248d381a2eecb749187d 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_4184 b3669069e76c248d381a2eecb749187d 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_4184 b3669069e76c248d381a2eecb749187d 467 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 21-04-2016 IPR024633 DnaA N-terminal domain SDY_4184 b3669069e76c248d381a2eecb749187d 467 Pfam PF00308 Bacterial dnaA protein 133 349 3.8E-99 T 21-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SDY_4184 b3669069e76c248d381a2eecb749187d 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.471 T 21-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SDY_4232 d45b008aacbeb775d082a5473435b006 395 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 1 325 1.7E-126 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4232 d45b008aacbeb775d082a5473435b006 395 PANTHER PTHR36106 1 393 1.9E-273 T 21-04-2016 SDY_4232 d45b008aacbeb775d082a5473435b006 395 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 1 392 4.4E-175 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4232 d45b008aacbeb775d082a5473435b006 395 PIRSF PIRSF004539 1 393 2.6E-168 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4232 d45b008aacbeb775d082a5473435b006 395 PANTHER PTHR36106:SF3 1 393 1.9E-273 T 21-04-2016 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 SUPERFAMILY SSF51569 1 316 5.05E-118 T 21-04-2016 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.5E-167 T 21-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 PANTHER PTHR10683 1 313 1.4E-178 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 Pfam PF00923 Transaldolase 14 313 7.1E-103 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 PANTHER PTHR10683:SF18 1 313 1.4E-178 T 21-04-2016 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.598 T 21-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 Gene3D G3DSA:3.20.20.70 3 315 1.9E-134 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0008 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 1.1E-13 T 21-04-2016 IPR024463 Transposase TnpC, homeodomain SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 Pfam PF13817 IS66 C-terminal element 468 505 3.0E-13 T 21-04-2016 SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 Pfam PF03050 Transposase IS66 family 176 461 1.9E-101 T 21-04-2016 IPR004291 Transposase, IS66 SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 PANTHER PTHR33678 19 504 2.3E-135 T 21-04-2016 SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 PANTHER PTHR33678:SF1 19 504 2.3E-135 T 21-04-2016 SDY_4479 cb6c7910236dcaa87ca928c6da49aedc 512 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 161 3.3E-12 T 21-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Pfam PF00583 Acetyltransferase (GNAT) family 790 863 4.3E-10 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.8E-46 T 21-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SUPERFAMILY SSF51735 2 136 1.47E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Pfam PF13549 ATP-grasp domain 472 694 8.1E-75 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SUPERFAMILY SSF55729 707 866 6.62E-22 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 PANTHER PTHR33303 456 695 1.6E-254 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 PANTHER PTHR33303 6 426 1.6E-254 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Gene3D G3DSA:3.40.50.720 1 127 2.4E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Gene3D G3DSA:3.40.630.30 718 877 1.7E-25 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SUPERFAMILY SSF52210 287 447 6.67E-37 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Gene3D G3DSA:3.30.470.20 488 589 7.8E-5 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 PANTHER PTHR33303:SF3 456 695 1.6E-254 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 PANTHER PTHR33303:SF3 6 426 1.6E-254 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Gene3D G3DSA:3.40.50.261 280 439 9.3E-16 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SMART SM00881 9 104 1.2E-24 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Gene3D G3DSA:3.40.50.261 128 279 3.8E-24 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SUPERFAMILY SSF52210 125 286 9.68E-36 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 SUPERFAMILY SSF56059 481 687 3.34E-28 T 21-04-2016 SDY_2827 e0d47d20ecbbc5f909cd1be14b3705f5 886 Pfam PF13380 CoA binding domain 13 129 1.5E-21 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 52.246 T 21-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 SUPERFAMILY SSF89550 3 241 5.76E-64 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 SMART SM00481 4 78 6.3E-21 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 Gene3D G3DSA:3.20.20.140 1 237 3.3E-64 T 21-04-2016 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 Pfam PF02811 PHP domain 5 80 1.9E-8 T 21-04-2016 IPR004013 PHP domain GO:0003824 SDY_1003 bdd50e33186975fd7bc70f5271315dd3 245 PANTHER PTHR36928 1 245 9.3E-116 T 21-04-2016 SDY_P167 017e86e4dfc7389d34c0e238447314e2 155 PANTHER PTHR30012 1 155 7.2E-51 T 21-04-2016 SDY_P167 017e86e4dfc7389d34c0e238447314e2 155 PANTHER PTHR30012:SF0 1 155 7.2E-51 T 21-04-2016 SDY_P167 017e86e4dfc7389d34c0e238447314e2 155 Pfam PF00482 Type II secretion system (T2SS), protein F 35 153 1.8E-22 T 21-04-2016 IPR018076 Type II secretion system F domain SDY_4538 25bf64e38a16836070c4e2b9e13413f5 204 SUPERFAMILY SSF111369 33 137 4.97E-7 T 21-04-2016 SDY_4538 25bf64e38a16836070c4e2b9e13413f5 204 PANTHER PTHR30386:SF7 2 204 3.2E-78 T 21-04-2016 SDY_4538 25bf64e38a16836070c4e2b9e13413f5 204 Pfam PF00529 HlyD membrane-fusion protein of T1SS 76 202 3.0E-12 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_4538 25bf64e38a16836070c4e2b9e13413f5 204 PANTHER PTHR30386 2 204 3.2E-78 T 21-04-2016 SDY_4538 25bf64e38a16836070c4e2b9e13413f5 204 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 2 136 7.6E-10 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 PANTHER PTHR24220 6 303 6.6E-190 T 21-04-2016 SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 Gene3D G3DSA:3.40.50.300 2 228 3.5E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 Pfam PF00005 ABC transporter 21 165 3.0E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 SMART SM00382 30 213 3.7E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 SUPERFAMILY SSF52540 3 232 2.88E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0036 20aa9f42763c32e17e0926eb34d42b68 308 PANTHER PTHR24220:SF305 6 303 6.6E-190 T 21-04-2016 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 Pfam PF00551 Formyl transferase 6 183 9.1E-56 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 PANTHER PTHR11138 5 307 1.7E-128 T 21-04-2016 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.877 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 SUPERFAMILY SSF50486 208 309 6.12E-38 T 21-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 21-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 Gene3D G3DSA:3.10.25.10 210 306 9.8E-39 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 Gene3D G3DSA:3.40.50.170 4 208 3.7E-75 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 9.2E-127 T 21-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 SUPERFAMILY SSF53328 5 207 6.02E-68 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_3464 9fcbb55e3af71ed326df7af0cafdb201 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.0E-32 T 21-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_1433 9000918c451282e1e5f9189bd586d414 83 PIRSF PIRSF004509 2 83 8.6E-48 T 21-04-2016 IPR016418 Uncharacterised conserved protein UCP004509, Rem SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 1.7E-192 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 PANTHER PTHR21148:SF26 1 368 4.3E-187 T 21-04-2016 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 5.8E-182 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.719 T 21-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 SUPERFAMILY SSF51713 1 364 9.94E-164 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 Gene3D G3DSA:3.20.20.105 1 367 9.2E-171 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.2E-93 T 21-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_0328 91ce89c8c196f54ebdda1ef42dfb6aee 375 PANTHER PTHR21148 1 368 4.3E-187 T 21-04-2016 SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 Pfam PF03466 LysR substrate binding domain 9 165 8.2E-16 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 PANTHER PTHR30419:SF0 1 183 1.2E-90 T 21-04-2016 SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 Gene3D G3DSA:3.40.190.10 8 50 2.8E-6 T 21-04-2016 SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 SUPERFAMILY SSF53850 9 169 1.59E-18 T 21-04-2016 SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 PANTHER PTHR30419 1 183 1.2E-90 T 21-04-2016 SDY_4539 d54f1edfd0c0107b08f85ecffeed037b 186 Gene3D G3DSA:3.40.190.10 51 135 8.9E-6 T 21-04-2016 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 Gene3D G3DSA:3.30.230.70 9 237 9.0E-36 T 21-04-2016 IPR027408 PNPase/RNase PH domain SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 SUPERFAMILY SSF54211 1 181 6.58E-46 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.867 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 PANTHER PTHR11953:SF0 1 238 3.9E-89 T 21-04-2016 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 PANTHER PTHR11953 1 238 3.9E-89 T 21-04-2016 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 SUPERFAMILY SSF55666 153 236 2.88E-26 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 21-04-2016 IPR018336 Ribonuclease PH, conserved site SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.6E-12 T 21-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.9E-114 T 21-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 SDY_4074 8441d38fd6282278f0b4c3d687b61e1d 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.5E-24 T 21-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 Pfam PF00664 ABC transporter transmembrane region 47 196 5.0E-6 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 Pfam PF00005 ABC transporter 341 477 1.2E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 Gene3D G3DSA:1.20.1560.10 9 303 3.9E-20 T 21-04-2016 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 PANTHER PTHR24220 324 529 2.4E-134 T 21-04-2016 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 Gene3D G3DSA:3.40.50.300 322 530 2.7E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0865 2352bd339520c0c074ac9e825a34544f 547 SUPERFAMILY SSF90123 4 299 4.32E-26 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 SUPERFAMILY SSF52540 316 530 5.58E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0865 2352bd339520c0c074ac9e825a34544f 547 SMART SM00382 348 526 2.5E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0865 2352bd339520c0c074ac9e825a34544f 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 6.3E-109 T 21-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 SDY_0865 2352bd339520c0c074ac9e825a34544f 547 PANTHER PTHR24220:SF425 324 529 2.4E-134 T 21-04-2016 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.0E-91 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 PIRSF PIRSF001461 1 225 7.1E-106 T 21-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 SUPERFAMILY SSF51366 3 218 2.62E-76 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 PANTHER PTHR11749:SF7 2 222 1.1E-140 T 21-04-2016 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.3E-95 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 PANTHER PTHR11749 2 222 1.1E-140 T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 21-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SDY_3693 1b84ed2c8478074f039c6c23313b7c85 225 Gene3D G3DSA:3.20.20.70 1 221 4.4E-94 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Gene3D G3DSA:3.90.105.10 143 163 1.7E-25 T 21-04-2016 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Gene3D G3DSA:3.90.105.10 27 50 1.7E-25 T 21-04-2016 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 2.0E-39 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Gene3D G3DSA:2.170.190.11 51 142 4.5E-34 T 21-04-2016 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 PANTHER PTHR10192 1 410 1.4E-259 T 21-04-2016 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Pfam PF00994 Probable molybdopterin binding domain 183 317 2.5E-27 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 SMART SM00852 181 318 6.0E-43 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 SUPERFAMILY SSF53218 178 321 2.36E-43 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Gene3D G3DSA:3.40.980.10 164 327 3.5E-64 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 SUPERFAMILY SSF63882 7 177 5.49E-58 T 21-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 SUPERFAMILY SSF63867 328 407 5.23E-25 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 PANTHER PTHR10192:SF11 1 410 1.4E-259 T 21-04-2016 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 2.9E-21 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 Gene3D G3DSA:2.40.340.10 330 402 5.4E-35 T 21-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0760 5601cfea7dd661652ca1ba9b6f2bf950 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 1.8E-33 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_1853 5543cc4692147c9ce3a77348ad77d3b9 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 1.3E-108 T 21-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 SDY_1853 5543cc4692147c9ce3a77348ad77d3b9 352 PANTHER PTHR30578 3 351 1.0E-172 T 21-04-2016 SDY_1853 5543cc4692147c9ce3a77348ad77d3b9 352 PANTHER PTHR30578:SF0 3 351 1.0E-172 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SDY_1853 5543cc4692147c9ce3a77348ad77d3b9 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.881 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SDY_1853 5543cc4692147c9ce3a77348ad77d3b9 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 5.6E-151 T 21-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 SDY_2293 843198fe173818e7b49607c406a0aef8 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.57 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SDY_2293 843198fe173818e7b49607c406a0aef8 306 PANTHER PTHR30606 2 306 6.9E-186 T 21-04-2016 SDY_2293 843198fe173818e7b49607c406a0aef8 306 PIRSF PIRSF026649 2 306 3.2E-113 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_2293 843198fe173818e7b49607c406a0aef8 306 PANTHER PTHR30606:SF5 2 306 6.9E-186 T 21-04-2016 SDY_2293 843198fe173818e7b49607c406a0aef8 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 1.0E-122 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_2293 843198fe173818e7b49607c406a0aef8 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 9.7E-150 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SDY_2387 a7fdad05b80f198f03b932c0ed51678e 91 PANTHER PTHR33293 4 91 4.3E-33 T 21-04-2016 SDY_2387 a7fdad05b80f198f03b932c0ed51678e 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2387 a7fdad05b80f198f03b932c0ed51678e 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2387 a7fdad05b80f198f03b932c0ed51678e 91 Pfam PF03811 InsA N-terminal domain 2 36 2.0E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2387 a7fdad05b80f198f03b932c0ed51678e 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 Pfam PF00793 DAHP synthetase I family 38 338 6.2E-113 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 PANTHER PTHR21225:SF7 1 349 1.6E-279 T 21-04-2016 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 PANTHER PTHR21225 1 349 1.6E-279 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.0E-183 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 Gene3D G3DSA:3.20.20.70 9 349 5.5E-164 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 SUPERFAMILY SSF51569 7 348 6.28E-141 T 21-04-2016 SDY_0701 8b4efabd0c5b0f60af7efd20fd31a750 350 PIRSF PIRSF001361 1 350 9.9E-168 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 Gene3D G3DSA:3.30.1360.80 1 170 2.9E-76 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PANTHER PTHR35799 2 169 6.6E-107 T 21-04-2016 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PIRSF PIRSF006160 1 162 3.4E-66 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 SUPERFAMILY SSF63411 4 162 3.2E-67 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 4.0E-85 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.5E-62 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2884 9e01ce4838b08bee8178f00a8b68ada0 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.375 T 21-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 SUPERFAMILY SSF53850 1 106 4.78E-33 T 21-04-2016 SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 PANTHER PTHR18966:SF194 23 107 1.1E-46 T 21-04-2016 SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 PANTHER PTHR18966 23 107 1.1E-46 T 21-04-2016 SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 106 3.7E-29 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2408 bbd768fb593b979e22677d2e4477cd02 108 Gene3D G3DSA:3.40.190.10 7 106 4.0E-35 T 21-04-2016 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 7.5E-27 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-44 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.8E-44 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.8E-44 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-44 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 PANTHER PTHR34182 2 109 1.8E-35 T 21-04-2016 SDY_3356 efb43c6da00f87d001d9ddfcafb20649 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 9.4E-22 T 21-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SDY_2453 b1c58ba9f8c807f65ad40c200f32fa25 550 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 8.0E-56 T 21-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 SDY_2453 b1c58ba9f8c807f65ad40c200f32fa25 550 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 550 42.716 T 21-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 SDY_2453 b1c58ba9f8c807f65ad40c200f32fa25 550 PANTHER PTHR33908 2 550 4.5E-167 T 21-04-2016 SDY_2453 b1c58ba9f8c807f65ad40c200f32fa25 550 PANTHER PTHR33908:SF3 2 550 4.5E-167 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 SUPERFAMILY SSF46785 14 97 1.56E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 Gene3D G3DSA:3.40.190.10 187 268 2.1E-21 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 PANTHER PTHR30537:SF18 6 309 4.8E-211 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 Pfam PF03466 LysR substrate binding domain 98 302 1.7E-35 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 Gene3D G3DSA:3.40.190.10 103 186 2.0E-21 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 PANTHER PTHR30537 6 309 4.8E-211 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 4.1E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 SUPERFAMILY SSF53850 100 307 1.39E-40 T 21-04-2016 SDY_1700 e9f0a83fe3c0583df94a37c4d762b0e5 314 Gene3D G3DSA:1.10.10.10 14 97 8.1E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1230 5ce114f32710a5a79e311f2177256801 578 Pfam PF03471 Transporter associated domain 493 571 2.5E-9 T 21-04-2016 IPR005170 Transporter-associated domain SDY_1230 5ce114f32710a5a79e311f2177256801 578 Gene3D G3DSA:3.30.70.1450 422 483 9.6E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_1230 5ce114f32710a5a79e311f2177256801 578 SMART SM01091 492 573 6.1E-14 T 21-04-2016 IPR005170 Transporter-associated domain SDY_1230 5ce114f32710a5a79e311f2177256801 578 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 50.385 T 21-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 SDY_1230 5ce114f32710a5a79e311f2177256801 578 SUPERFAMILY SSF116726 418 483 7.06E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_1230 5ce114f32710a5a79e311f2177256801 578 SUPERFAMILY SSF56176 497 571 1.45E-8 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_1230 5ce114f32710a5a79e311f2177256801 578 Gene3D G3DSA:3.30.465.10 497 570 3.5E-9 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_1230 5ce114f32710a5a79e311f2177256801 578 Pfam PF02080 TrkA-C domain 421 483 5.1E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_1230 5ce114f32710a5a79e311f2177256801 578 Pfam PF00999 Sodium/hydrogen exchanger family 16 388 8.9E-61 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_1230 5ce114f32710a5a79e311f2177256801 578 PANTHER PTHR32507:SF7 1 576 6.8E-302 T 21-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 SDY_1230 5ce114f32710a5a79e311f2177256801 578 PANTHER PTHR32507 1 576 6.8E-302 T 21-04-2016 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SMART SM00491 474 603 3.8E-55 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SUPERFAMILY SSF52540 573 597 2.43E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SUPERFAMILY SSF52540 38 88 2.43E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SUPERFAMILY SSF52540 477 542 2.43E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Gene3D G3DSA:3.40.50.300 190 233 2.7E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Gene3D G3DSA:3.40.50.300 8 116 2.7E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Pfam PF00270 DEAD/DEAH box helicase 31 105 3.3E-5 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 PANTHER PTHR11472 13 621 1.5E-245 T 21-04-2016 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Gene3D G3DSA:3.40.50.300 450 597 4.1E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SMART SM00487 16 342 0.0051 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Pfam PF06733 DEAD_2 179 247 6.4E-5 T 21-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 SUPERFAMILY SSF52540 13 232 2.33E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 PANTHER PTHR11472:SF37 13 621 1.5E-245 T 21-04-2016 SDY_1712 50f143dbc953b03ee8362ce98be42b3a 636 Pfam PF13307 Helicase C-terminal domain 459 616 1.7E-34 T 21-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SDY_1096 0867831a49d687da36c57d5dbd67cdb3 195 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 102 176 2.6E-13 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SDY_1096 0867831a49d687da36c57d5dbd67cdb3 195 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 13 179 2.6E-91 T 21-04-2016 IPR022523 Flagellar regulator, FliZ SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 5.1E-15 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.3E-65 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.3E-65 T 21-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.40.270.10 1060 1242 5.2E-90 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.40.270.10 793 820 5.2E-90 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.40.50.100 715 792 3.5E-31 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.30.150.10 592 656 6.9E-32 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 21-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856 5 231 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856 1034 1128 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856 340 725 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856 1182 1342 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 PANTHER PTHR20856 743 930 0.0 T 21-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-147 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-147 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-147 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 21-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.373 T 21-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.2E-58 T 21-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.2E-160 T 21-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.3E-28 T 21-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.40.50.150 828 937 2.1E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.1E-57 T 21-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 SUPERFAMILY SSF64484 343 939 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 SUPERFAMILY SSF64484 11 226 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 21-04-2016 SDY_3741 1e260a28384fd57ee6b07c84a1dcec4f 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 21-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.30.70.380 703 794 1.1E-30 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 SUPERFAMILY SSF56037 197 393 1.46E-77 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SDY_1808 7d70079655ba8dc682f277254076616a 795 SUPERFAMILY SSF54991 696 794 1.83E-30 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.30.56.10 155 183 6.9E-29 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.30.56.10 1 38 6.9E-29 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.30.56.20 402 475 2.2E-29 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 SMART SM00873 212 385 4.3E-100 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 8.0E-21 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 SMART SM00874 403 471 1.2E-31 T 21-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 50.06 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.1E-27 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SDY_1808 7d70079655ba8dc682f277254076616a 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 5.1E-303 T 21-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 SMART SM00896 701 794 1.2E-44 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 6.6E-28 T 21-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SDY_1808 7d70079655ba8dc682f277254076616a 795 PANTHER PTHR10947:SF0 2 794 0.0 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 PANTHER PTHR10947 2 794 0.0 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 SUPERFAMILY SSF46955 403 475 2.93E-21 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.30.930.10 496 690 5.8E-66 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:2.40.50.140 42 154 2.2E-46 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1808 7d70079655ba8dc682f277254076616a 795 SUPERFAMILY SSF50249 35 197 5.88E-52 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1808 7d70079655ba8dc682f277254076616a 795 Gene3D G3DSA:3.50.40.10 198 392 1.6E-86 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SDY_1808 7d70079655ba8dc682f277254076616a 795 SUPERFAMILY SSF55681 467 690 2.53E-55 T 21-04-2016 SDY_1808 7d70079655ba8dc682f277254076616a 795 Pfam PF03483 B3/4 domain 212 385 5.0E-71 T 21-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PANTHER PTHR30483:SF16 1 359 0.0 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 Gene3D G3DSA:3.40.50.2300 24 224 1.1E-65 T 21-04-2016 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 SUPERFAMILY SSF53822 24 364 1.06E-90 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PANTHER PTHR30483 1 359 0.0 T 21-04-2016 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 5.1E-67 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3607 b11669a9c0b23c4feeb2d4d134d71f65 369 Pfam PF13458 Periplasmic binding protein 26 363 3.6E-62 T 21-04-2016 IPR028081 Leucine-binding protein domain SDY_2112 94080e8142a8ea3ee1e39a68f064bcde 278 Gene3D G3DSA:3.40.50.1820 1 276 1.4E-78 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2112 94080e8142a8ea3ee1e39a68f064bcde 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 2.6E-116 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SDY_2112 94080e8142a8ea3ee1e39a68f064bcde 278 Pfam PF00756 Putative esterase 21 271 3.4E-71 T 21-04-2016 IPR000801 Putative esterase SDY_2112 94080e8142a8ea3ee1e39a68f064bcde 278 SUPERFAMILY SSF53474 1 276 2.3E-89 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2112 94080e8142a8ea3ee1e39a68f064bcde 278 PANTHER PTHR10061 1 278 2.6E-173 T 21-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 PANTHER PTHR11061 6 366 7.4E-241 T 21-04-2016 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 PANTHER PTHR11061:SF25 6 366 7.4E-241 T 21-04-2016 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 SUPERFAMILY SSF53335 6 363 4.26E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.847 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 1.6E-186 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 1.5E-187 T 21-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 Gene3D G3DSA:3.40.50.150 154 364 1.9E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3763 d94e5e747ec4b5fe15968dfadc337d00 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Pfam PF01568 Molydopterin dinucleotide binding domain 647 756 1.3E-22 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 2.0E-6 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Gene3D G3DSA:3.40.228.10 211 369 1.3E-49 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Pfam PF00384 Molybdopterin oxidoreductase 215 527 4.6E-65 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Pfam PF00384 Molybdopterin oxidoreductase 90 208 1.3E-22 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 PANTHER PTHR11615:SF19 415 786 0.0 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Gene3D G3DSA:2.40.40.20 623 778 1.0E-52 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 SUPERFAMILY SSF50692 638 783 1.65E-36 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 PANTHER PTHR11615 415 786 0.0 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 470 487 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 SUPERFAMILY SSF53706 48 634 1.09E-149 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Gene3D G3DSA:3.90.55.10 472 578 4.5E-37 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 PANTHER PTHR11615 1 377 0.0 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 PANTHER PTHR11615:SF19 1 377 0.0 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Gene3D G3DSA:3.40.50.740 83 184 1.3E-42 T 21-04-2016 SDY_1171 9bdb5359126e14f782e779ad49e86dc7 786 Gene3D G3DSA:3.40.50.740 370 471 1.3E-42 T 21-04-2016 SDY_1146 1de5166c91fb1872899fa5ddb932d486 261 PANTHER PTHR30477:SF0 9 259 1.3E-90 T 21-04-2016 SDY_1146 1de5166c91fb1872899fa5ddb932d486 261 Gene3D G3DSA:1.10.3470.10 61 259 2.6E-11 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1146 1de5166c91fb1872899fa5ddb932d486 261 PANTHER PTHR30477 9 259 1.3E-90 T 21-04-2016 SDY_1146 1de5166c91fb1872899fa5ddb932d486 261 SUPERFAMILY SSF81345 3 257 7.32E-42 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1146 1de5166c91fb1872899fa5ddb932d486 261 Pfam PF00950 ABC 3 transport family 2 257 1.6E-88 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SDY_3984 e9f588040b00f0a765a09edb29d4dc3c 112 Pfam PF04219 Protein of unknown function, DUF 10 98 2.7E-39 T 21-04-2016 IPR007335 Protein of unknown function DUF413 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Pfam PF01590 GAF domain 23 154 9.2E-9 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 503 61.32 T 21-04-2016 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 UniPathway: UPA00638 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 SUPERFAMILY SSF55781 22 170 2.18E-16 T 21-04-2016 IPR029016 GAF domain-like SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Gene3D G3DSA:1.10.10.60 410 502 8.6E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 SMART SM00382 207 350 1.0E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2906 f8ef833da295fbc3553200455603f3d2 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Gene3D G3DSA:1.10.8.60 360 409 5.8E-18 T 21-04-2016 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 SMART SM00065 20 167 7.9E-18 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 PANTHER PTHR32071:SF35 186 502 5.0E-215 T 21-04-2016 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Gene3D G3DSA:3.40.50.300 184 359 4.7E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2906 f8ef833da295fbc3553200455603f3d2 504 PANTHER PTHR32071 186 502 5.0E-215 T 21-04-2016 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 SUPERFAMILY SSF52540 187 421 1.59E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Pfam PF00158 Sigma-54 interaction domain 187 353 4.8E-67 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_2906 f8ef833da295fbc3553200455603f3d2 504 Gene3D G3DSA:3.30.450.40 7 167 7.2E-15 T 21-04-2016 IPR029016 GAF domain-like SDY_2906 f8ef833da295fbc3553200455603f3d2 504 SUPERFAMILY SSF46689 451 502 6.72E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 21-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PANTHER PTHR11451 4 244 1.8E-161 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PANTHER PTHR11451 399 571 1.8E-161 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 6.6E-49 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Gene3D G3DSA:3.90.960.10 250 388 3.1E-31 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 SUPERFAMILY SSF55826 218 390 1.44E-30 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PANTHER PTHR11451:SF3 4 244 1.8E-161 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PANTHER PTHR11451:SF3 399 571 1.8E-161 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Gene3D G3DSA:3.40.50.800 470 570 5.6E-32 T 21-04-2016 IPR004154 Anticodon-binding SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.4E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 SUPERFAMILY SSF55681 407 478 1.75E-109 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 SUPERFAMILY SSF55681 10 237 1.75E-109 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.157 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 SUPERFAMILY SSF52954 463 571 1.81E-33 T 21-04-2016 IPR004154 Anticodon-binding SDY_0213 eedee31e166c3b89507482055cfed6e0 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 9.1E-283 T 21-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Gene3D G3DSA:3.30.930.10 407 468 3.7E-108 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Gene3D G3DSA:3.30.930.10 1 228 3.7E-108 T 21-04-2016 SDY_0213 eedee31e166c3b89507482055cfed6e0 572 Pfam PF03129 Anticodon binding domain 475 568 3.0E-21 T 21-04-2016 IPR004154 Anticodon-binding SDY_0213 eedee31e166c3b89507482055cfed6e0 572 PIRSF PIRSF001535 1 572 3.3E-278 T 21-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 27.925 T 21-04-2016 IPR024905 Sec-independent protein translocase protein TatE SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 Pfam PF02416 mttA/Hcf106 family 4 51 3.4E-12 T 21-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 PANTHER PTHR33162 1 52 6.2E-29 T 21-04-2016 SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 PANTHER PTHR33162:SF2 1 52 6.2E-29 T 21-04-2016 SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.0E-20 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SDY_0549 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 21.266 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 2.5E-12 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 SMART SM00345 8 66 2.0E-17 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 PANTHER PTHR11751 9 92 1.1E-16 T 21-04-2016 SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 SMART SM00895 76 208 2.4E-18 T 21-04-2016 IPR011711 GntR, C-terminal SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 Gene3D G3DSA:1.20.120.530 69 218 2.3E-25 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 Pfam PF07729 FCD domain 76 206 2.5E-20 T 21-04-2016 IPR011711 GntR, C-terminal SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 SUPERFAMILY SSF48008 72 209 3.92E-18 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 SUPERFAMILY SSF46785 9 70 2.15E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2854 0eff3dcdb6f0ee4910cadd8d9338a5eb 220 Gene3D G3DSA:1.10.10.10 9 67 9.0E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3181 30c48302e638b3496e2461afa67977b4 103 PANTHER PTHR38088:SF2 2 103 8.4E-69 T 21-04-2016 SDY_3181 30c48302e638b3496e2461afa67977b4 103 PIRSF PIRSF029143 1 103 4.0E-51 T 21-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 SDY_3181 30c48302e638b3496e2461afa67977b4 103 PANTHER PTHR38088 2 103 8.4E-69 T 21-04-2016 SDY_3181 30c48302e638b3496e2461afa67977b4 103 Gene3D G3DSA:2.30.130.30 1 102 5.6E-50 T 21-04-2016 SDY_3181 30c48302e638b3496e2461afa67977b4 103 SUPERFAMILY SSF88697 1 102 1.21E-33 T 21-04-2016 IPR015947 PUA-like domain SDY_3181 30c48302e638b3496e2461afa67977b4 103 Pfam PF04266 ASCH domain 6 101 7.6E-16 T 21-04-2016 IPR007374 ASCH domain SDY_3181 30c48302e638b3496e2461afa67977b4 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 32.156 T 21-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 SDY_3181 30c48302e638b3496e2461afa67977b4 103 SMART SM01022 6 102 4.4E-27 T 21-04-2016 IPR007374 ASCH domain SDY_4240 c829b9724af43c60b70e0f10795110ed 90 PANTHER PTHR31435:SF3 1 89 8.6E-25 T 21-04-2016 SDY_4240 c829b9724af43c60b70e0f10795110ed 90 Gene3D G3DSA:3.40.630.30 1 89 2.6E-33 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4240 c829b9724af43c60b70e0f10795110ed 90 SUPERFAMILY SSF55729 2 88 4.58E-23 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4240 c829b9724af43c60b70e0f10795110ed 90 PANTHER PTHR31435 1 89 8.6E-25 T 21-04-2016 SDY_4240 c829b9724af43c60b70e0f10795110ed 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 1.1E-21 T 21-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 PANTHER PTHR11644 18 294 4.6E-168 T 21-04-2016 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 SUPERFAMILY SSF53927 1 148 5.52E-41 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.849 T 21-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 SUPERFAMILY SSF53927 152 293 1.25E-44 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 4.7E-45 T 21-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 PIRSF PIRSF006334 14 293 4.0E-106 T 21-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 Gene3D G3DSA:3.40.140.10 189 292 4.0E-25 T 21-04-2016 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 62 139 3.3E-11 T 21-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 Gene3D G3DSA:3.40.140.10 34 177 5.8E-43 T 21-04-2016 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 3.1E-85 T 21-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SDY_2144 55b5ee7bce81a2b7f0db667e66696c5e 294 PANTHER PTHR11644:SF15 18 294 4.6E-168 T 21-04-2016 SDY_1186 5404a8c98a649475407eeee488a28947 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1186 5404a8c98a649475407eeee488a28947 100 Pfam PF01527 Transposase 3 74 4.2E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1186 5404a8c98a649475407eeee488a28947 100 PANTHER PTHR33215 3 100 6.2E-18 T 21-04-2016 SDY_1186 5404a8c98a649475407eeee488a28947 100 SUPERFAMILY SSF46689 4 94 4.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0535 5404a8c98a649475407eeee488a28947 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0535 5404a8c98a649475407eeee488a28947 100 Pfam PF01527 Transposase 3 74 4.2E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0535 5404a8c98a649475407eeee488a28947 100 PANTHER PTHR33215 3 100 6.2E-18 T 21-04-2016 SDY_0535 5404a8c98a649475407eeee488a28947 100 SUPERFAMILY SSF46689 4 94 4.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1068 5404a8c98a649475407eeee488a28947 100 Gene3D G3DSA:1.10.10.60 9 90 8.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1068 5404a8c98a649475407eeee488a28947 100 Pfam PF01527 Transposase 3 74 4.2E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1068 5404a8c98a649475407eeee488a28947 100 PANTHER PTHR33215 3 100 6.2E-18 T 21-04-2016 SDY_1068 5404a8c98a649475407eeee488a28947 100 SUPERFAMILY SSF46689 4 94 4.3E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 SUPERFAMILY SSF55874 289 453 2.62E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Gene3D G3DSA:3.30.565.10 286 454 3.4E-39 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 SMART SM00387 345 455 3.9E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PANTHER PTHR24423 178 456 7.9E-266 T 21-04-2016 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PANTHER PTHR24423 1 134 7.9E-266 T 21-04-2016 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 SMART SM00304 184 237 1.1E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 2.5E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Pfam PF00672 HAMP domain 165 234 6.1E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 SMART SM00388 238 300 1.4E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Gene3D G3DSA:1.10.287.130 228 285 8.8E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 SUPERFAMILY SSF47384 224 299 3.53E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 147 1.6E-10 T 21-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.4E-15 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PANTHER PTHR24423:SF553 178 456 7.9E-266 T 21-04-2016 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 PANTHER PTHR24423:SF553 1 134 7.9E-266 T 21-04-2016 SDY_3835 6ae6d6b8b215800f01645f709e86bc44 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 3.1E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3157 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 5.0E-118 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 PANTHER PTHR30559:SF0 2 359 3.8E-248 T 21-04-2016 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 6.2E-194 T 21-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 8.6E-89 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 PANTHER PTHR30559 2 359 3.8E-248 T 21-04-2016 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 SUPERFAMILY SSF51569 4 357 6.23E-132 T 21-04-2016 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 Gene3D G3DSA:3.20.20.70 11 355 1.1E-123 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3157 2850d15ff93041e80764356a1cb98b51 359 PIRSF PIRSF001359 13 359 2.4E-108 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 SUPERFAMILY SSF52499 1 209 2.62E-64 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PANTHER PTHR11080:SF4 6 263 5.5E-174 T 21-04-2016 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PIRSF PIRSF001111 1 285 2.1E-131 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 Pfam PF00550 Phosphopantetheine attachment site 217 276 9.9E-7 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PANTHER PTHR11080 6 263 5.5E-174 T 21-04-2016 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 SUPERFAMILY SSF47336 209 280 1.02E-7 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 112 134 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 168 186 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 2 14 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 186 203 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 63 80 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 PRINTS PR01398 Isochorismatase signature 80 99 2.7E-51 T 21-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 Pfam PF00857 Isochorismatase family 32 205 3.7E-38 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 Gene3D G3DSA:1.10.1200.10 230 282 5.1E-5 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_0526 7e1cc24cc49fb1111cd59413fabd36cd 285 Gene3D G3DSA:3.40.50.850 1 229 3.4E-77 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 3.9E-59 T 21-04-2016 IPR005247 YbhB/YbcL SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 Gene3D G3DSA:3.90.280.10 1 158 5.5E-59 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 SUPERFAMILY SSF49777 1 157 2.49E-53 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 PANTHER PTHR30289 1 157 1.6E-131 T 21-04-2016 SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 8.6E-40 T 21-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SDY_0833 fb06de676b1c80d85c5ffc120bc536f3 158 PANTHER PTHR30289:SF3 1 157 1.6E-131 T 21-04-2016 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 SUPERFAMILY SSF53383 17 440 5.21E-96 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.71 T 21-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 Pfam PF02347 Glycine cleavage system P-protein 479 739 8.1E-9 T 21-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 9.6E-194 T 21-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 SUPERFAMILY SSF53383 929 951 3.34E-101 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 SUPERFAMILY SSF53383 480 889 3.34E-101 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 PANTHER PTHR11773 1 957 0.0 T 21-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 21-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 Gene3D G3DSA:3.40.640.10 93 305 4.8E-15 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 Gene3D G3DSA:3.40.640.10 504 779 1.5E-43 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3178 c45002e0ccbe44a9671f799b738539c4 957 PANTHER PTHR11773:SF1 1 957 0.0 T 21-04-2016 SDY_1239 33179bda7817418c2b3e323bbf1346cc 137 PANTHER PTHR10108:SF849 1 124 5.8E-16 T 21-04-2016 SDY_1239 33179bda7817418c2b3e323bbf1346cc 137 SUPERFAMILY SSF53335 20 123 4.59E-19 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1239 33179bda7817418c2b3e323bbf1346cc 137 Gene3D G3DSA:3.40.50.150 22 118 2.3E-19 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1239 33179bda7817418c2b3e323bbf1346cc 137 Pfam PF13847 Methyltransferase domain 60 121 9.5E-11 T 21-04-2016 IPR025714 Methyltransferase domain SDY_1239 33179bda7817418c2b3e323bbf1346cc 137 PANTHER PTHR10108 1 124 5.8E-16 T 21-04-2016 SDY_1803 39ac005d7fff29ac433e067688c9bbd4 154 Gene3D G3DSA:3.90.1720.10 38 154 5.3E-40 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1803 39ac005d7fff29ac433e067688c9bbd4 154 Pfam PF00877 NlpC/P60 family 47 153 9.3E-31 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1803 39ac005d7fff29ac433e067688c9bbd4 154 PANTHER PTHR21666 6 154 7.4E-43 T 21-04-2016 SDY_1803 39ac005d7fff29ac433e067688c9bbd4 154 SUPERFAMILY SSF54001 34 154 4.25E-39 T 21-04-2016 SDY_2365 1a2b01c7108d6fe141ddbdaf9dac86fc 287 PANTHER PTHR38095 2 287 1.1E-166 T 21-04-2016 SDY_2365 1a2b01c7108d6fe141ddbdaf9dac86fc 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 5.0E-116 T 21-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SDY_2365 1a2b01c7108d6fe141ddbdaf9dac86fc 287 PANTHER PTHR38095:SF2 2 287 1.1E-166 T 21-04-2016 SDY_0459 12c7241ea3ff19fca3246f734db77c39 72 Gene3D G3DSA:1.20.1280.40 6 72 1.4E-37 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_0459 12c7241ea3ff19fca3246f734db77c39 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.4E-33 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_0459 12c7241ea3ff19fca3246f734db77c39 72 SUPERFAMILY SSF68989 2 72 9.94E-32 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 Gene3D G3DSA:3.40.718.10 3 339 1.1E-135 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 PANTHER PTHR30100:SF1 2 346 3.6E-149 T 21-04-2016 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 PIRSF PIRSF002465 2 343 1.1E-128 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 142.002 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 PANTHER PTHR30100 2 346 3.6E-149 T 21-04-2016 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 345 1.7E-148 T 21-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 SUPERFAMILY SSF53659 4 340 1.23E-103 T 21-04-2016 SDY_2060 c02bcb0ef0b9d98b3ffa5b280fbe5cd4 356 Pfam PF02504 Fatty acid synthesis protein 5 331 2.0E-129 T 21-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Gene3D G3DSA:3.40.140.20 377 519 1.3E-60 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Gene3D G3DSA:3.40.50.1380 5 190 8.2E-87 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.7E-121 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 PANTHER PTHR11692 5 529 0.0 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 SUPERFAMILY SSF53927 221 529 4.21E-131 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 7.5E-274 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Pfam PF02142 MGS-like domain 19 132 5.6E-31 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.598 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 PIRSF PIRSF000414 1 529 6.3E-229 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 SMART SM00798 137 461 1.4E-218 T 21-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 SMART SM00851 19 132 9.8E-64 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 SUPERFAMILY SSF52335 7 197 3.14E-72 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_3720 9ab1bee52fb87155174d4ffbc529cd88 529 Gene3D G3DSA:3.40.140.20 253 371 1.3E-50 T 21-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SDY_3482 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SDY_3482 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 4.2E-28 T 21-04-2016 SDY_3482 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SDY_3482 98f615537815942b22a86925403a8f47 130 PANTHER PTHR11758 1 130 3.4E-64 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SDY_3482 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.8E-49 T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SDY_3482 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 2 72 2.3E-28 T 21-04-2016 SDY_3482 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 21-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 73.558 T 21-04-2016 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 PANTHER PTHR30118:SF11 1 319 1.4E-231 T 21-04-2016 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 SUPERFAMILY SSF46785 7 81 2.51E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Gene3D G3DSA:3.40.190.10 182 280 1.7E-28 T 21-04-2016 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.5E-13 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Gene3D G3DSA:1.10.10.10 2 87 1.9E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Pfam PF03466 LysR substrate binding domain 102 313 9.7E-17 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 PANTHER PTHR30118 1 319 1.4E-231 T 21-04-2016 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Gene3D G3DSA:3.40.190.10 98 181 4.7E-16 T 21-04-2016 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 Gene3D G3DSA:3.40.190.10 290 318 4.7E-16 T 21-04-2016 SDY_4202 739fcee18c73b8e8793ccb8e3cf2c846 319 SUPERFAMILY SSF53850 98 314 1.21E-27 T 21-04-2016 SDY_1556 6113e2c98ce504c26d9ba4d0b6be3b9a 102 Hamap MF_00546 Acid shock protein [asr]. 1 102 16.598 T 21-04-2016 IPR023497 Acid shock protein SDY_0924 32c9c7180ab6dbc543ed30fb21b124b5 546 PANTHER PTHR30462:SF2 1 546 0.0 T 21-04-2016 SDY_0924 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 42 133 5.3E-9 T 21-04-2016 IPR003399 Mce/MlaD SDY_0924 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 285 389 1.2E-14 T 21-04-2016 IPR003399 Mce/MlaD SDY_0924 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 158 217 1.3E-7 T 21-04-2016 IPR003399 Mce/MlaD SDY_0924 32c9c7180ab6dbc543ed30fb21b124b5 546 PANTHER PTHR30462 1 546 0.0 T 21-04-2016 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 8.0E-22 T 21-04-2016 IPR029442 GyrI-like small molecule binding domain SDY_4657 633a6ea7a137b22313d77995beacbac7 289 SMART SM00342 21 104 3.6E-31 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 SMART SM00871 126 288 1.6E-13 T 21-04-2016 IPR010499 Bacterial transcription activator, effector binding SDY_4657 633a6ea7a137b22313d77995beacbac7 289 Gene3D G3DSA:1.10.10.60 3 57 5.7E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 PANTHER PTHR11019 6 112 2.5E-66 T 21-04-2016 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 PANTHER PTHR11019:SF84 6 112 2.5E-66 T 21-04-2016 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 SUPERFAMILY SSF46689 6 55 1.04E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 SUPERFAMILY SSF55136 122 288 3.14E-57 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain SDY_4657 633a6ea7a137b22313d77995beacbac7 289 SUPERFAMILY SSF46689 57 108 4.44E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 Gene3D G3DSA:3.20.80.10 123 289 2.6E-64 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain SDY_4657 633a6ea7a137b22313d77995beacbac7 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.3E-19 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4657 633a6ea7a137b22313d77995beacbac7 289 Gene3D G3DSA:1.10.10.60 58 119 1.8E-23 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 PANTHER PTHR24023:SF593 103 387 9.4E-28 T 21-04-2016 SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 Gene3D G3DSA:3.40.50.10540 322 391 2.3E-97 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 Gene3D G3DSA:3.40.50.10540 19 233 2.3E-97 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 Gene3D G3DSA:3.30.1540.10 239 321 7.1E-25 T 21-04-2016 SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 PANTHER PTHR24023 103 387 9.4E-28 T 21-04-2016 SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 SUPERFAMILY SSF89796 21 391 1.57E-121 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_2569 66ce96d7da7278514d992edf170bb8d1 394 Pfam PF02515 CoA-transferase family III 24 374 1.2E-113 T 21-04-2016 IPR003673 CoA-transferase family III GO:0003824 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.334 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Gene3D G3DSA:3.90.190.20 326 477 5.0E-54 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.7E-29 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 SUPERFAMILY SSF53244 323 476 3.3E-44 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Gene3D G3DSA:3.40.50.720 20 107 2.0E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0121 838a2cef1f203bcd1716f822d933f975 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 4.0E-184 T 21-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 SUPERFAMILY SSF53623 105 322 1.31E-74 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Gene3D G3DSA:3.40.1190.10 108 325 4.0E-86 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 PANTHER PTHR23135 14 469 1.1E-231 T 21-04-2016 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 2.0E-19 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 PANTHER PTHR23135:SF5 14 469 1.1E-231 T 21-04-2016 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 Pfam PF08245 Mur ligase middle domain 124 304 5.3E-28 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0121 838a2cef1f203bcd1716f822d933f975 491 SUPERFAMILY SSF51984 20 106 2.09E-29 T 21-04-2016 SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 Gene3D G3DSA:3.40.30.10 1 75 1.7E-28 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 PANTHER PTHR34386 1 80 3.0E-46 T 21-04-2016 SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 SUPERFAMILY SSF52833 1 72 3.94E-21 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 1.9E-32 T 21-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 PANTHER PTHR34386:SF3 1 80 3.0E-46 T 21-04-2016 SDY_2866 811d9afcdf5e11cabb8893172894e17c 81 Pfam PF00462 Glutaredoxin 3 57 1.2E-12 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SDY_3000 b60b0b68dbe3564a1262cfea82549c27 82 Gene3D G3DSA:2.10.260.10 1 82 2.9E-30 T 21-04-2016 SDY_3000 b60b0b68dbe3564a1262cfea82549c27 82 PANTHER PTHR40516 3 82 1.6E-26 T 21-04-2016 SDY_3000 b60b0b68dbe3564a1262cfea82549c27 82 SMART SM00966 7 52 7.5E-11 T 21-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SDY_3000 b60b0b68dbe3564a1262cfea82549c27 82 SUPERFAMILY SSF89447 4 75 5.58E-22 T 21-04-2016 SDY_3000 b60b0b68dbe3564a1262cfea82549c27 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 51 7.4E-12 T 21-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Gene3D G3DSA:3.30.70.20 173 227 4.4E-37 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Gene3D G3DSA:3.30.70.20 30 103 4.4E-37 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.5E-20 T 21-04-2016 IPR015246 Formate dehydrogenase, transmembrane SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 SUPERFAMILY SSF54862 26 250 5.65E-71 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 PIRSF PIRSF036298 1 294 3.3E-163 T 21-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 3.8E-145 T 21-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.11 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Gene3D G3DSA:1.20.5.480 247 293 4.6E-25 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 PANTHER PTHR11938 1 205 1.1E-143 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 SUPERFAMILY SSF81597 246 290 5.75E-14 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Gene3D G3DSA:3.30.70.20 104 137 1.7E-11 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 Gene3D G3DSA:3.30.70.20 138 172 1.3E-15 T 21-04-2016 SDY_1605 063b68bbe15fca7af12cd71fe199e799 294 PANTHER PTHR11938:SF84 1 205 1.1E-143 T 21-04-2016 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 SUPERFAMILY SSF103473 19 439 9.94E-65 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 426 1.1E-152 T 21-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 PANTHER PTHR23508:SF16 3 440 6.9E-239 T 21-04-2016 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 PANTHER PTHR23508 3 440 6.9E-239 T 21-04-2016 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 Pfam PF00083 Sugar (and other) transporter 24 232 4.7E-24 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 Pfam PF07690 Major Facilitator Superfamily 283 435 4.8E-13 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 Gene3D G3DSA:1.20.1250.20 249 438 1.5E-16 T 21-04-2016 SDY_4543 c6348158b194ea31e00ad9b5111943f7 440 Gene3D G3DSA:1.20.1250.20 13 232 9.3E-24 T 21-04-2016 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 Pfam PF01612 3'-5' exonuclease 3 169 3.7E-48 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 PANTHER PTHR12124:SF42 2 365 1.7E-99 T 21-04-2016 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 44.834 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 SUPERFAMILY SSF47819 194 301 4.67E-29 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 Pfam PF00570 HRDC domain 213 279 1.7E-14 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 Gene3D G3DSA:3.30.420.10 2 172 1.4E-14 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 SUPERFAMILY SSF53098 2 210 2.17E-67 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 SMART SM00474 3 171 9.0E-56 T 21-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 SUPERFAMILY SSF47819 295 373 1.7E-24 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 PANTHER PTHR12124 2 365 1.7E-99 T 21-04-2016 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 SMART SM00341 210 289 3.4E-23 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SDY_1708 58bf760368571732ce3b28ccfc2c51b8 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 2.0E-164 T 21-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 SDY_1998 491a44a5eb2926d2e3ef8b4ac4b26d3a 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 9.0E-44 T 21-04-2016 IPR007054 Lysis protein S SDY_1998 491a44a5eb2926d2e3ef8b4ac4b26d3a 71 PIRSF PIRSF030786 1 71 2.0E-43 T 21-04-2016 IPR007054 Lysis protein S SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 PANTHER PTHR32125 1 157 8.1E-64 T 21-04-2016 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.928 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 4.0E-72 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 Pfam PF02542 YgbB family 1 154 1.2E-66 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 21-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 Gene3D G3DSA:3.30.1330.50 1 156 1.4E-73 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2945 1474cda41f35e53ff58f26dc76c9adc5 159 SUPERFAMILY SSF69765 1 156 1.15E-66 T 21-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_3863 df0e11e9a918db796a8218b304eb1634 243 Pfam PF01263 Aldose 1-epimerase 28 214 3.7E-21 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SDY_3863 df0e11e9a918db796a8218b304eb1634 243 PANTHER PTHR10091 1 212 6.5E-31 T 21-04-2016 SDY_3863 df0e11e9a918db796a8218b304eb1634 243 PANTHER PTHR10091:SF5 1 212 6.5E-31 T 21-04-2016 SDY_3863 df0e11e9a918db796a8218b304eb1634 243 SUPERFAMILY SSF74650 26 236 2.51E-37 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_3863 df0e11e9a918db796a8218b304eb1634 243 Gene3D G3DSA:2.70.98.10 17 217 2.3E-17 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SDY_3791 4b948e9584775775a713efc3a37a9011 883 Gene3D G3DSA:1.20.1440.90 273 388 1.3E-32 T 21-04-2016 SDY_3791 4b948e9584775775a713efc3a37a9011 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 21-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 21-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PANTHER PTHR30523 1 883 0.0 T 21-04-2016 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PANTHER PTHR30523:SF3 1 883 0.0 T 21-04-2016 SDY_3791 4b948e9584775775a713efc3a37a9011 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 9.2E-295 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.3E-68 T 21-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.489 T 21-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SDY_3791 4b948e9584775775a713efc3a37a9011 883 SUPERFAMILY SSF51621 6 883 0.0 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_0253 3aabc96d19540d2b4ddae24f0b69acc4 249 Pfam PF00877 NlpC/P60 family 131 241 1.4E-30 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0253 3aabc96d19540d2b4ddae24f0b69acc4 249 Gene3D G3DSA:3.90.1720.10 119 244 5.0E-41 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0253 3aabc96d19540d2b4ddae24f0b69acc4 249 PANTHER PTHR21666 122 243 2.9E-39 T 21-04-2016 SDY_0253 3aabc96d19540d2b4ddae24f0b69acc4 249 PANTHER PTHR21666 20 34 2.9E-39 T 21-04-2016 SDY_0253 3aabc96d19540d2b4ddae24f0b69acc4 249 SUPERFAMILY SSF54001 120 243 1.91E-36 T 21-04-2016 SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.1E-223 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.4E-56 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 SUPERFAMILY SSF143548 16 158 9.68E-46 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 PANTHER PTHR30182 1 452 0.0 T 21-04-2016 SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 PANTHER PTHR30182:SF5 1 452 0.0 T 21-04-2016 SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-96 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SDY_3014 3c90fb5fd4c248b430f17f21c3646813 455 Gene3D G3DSA:3.30.1330.90 10 158 6.0E-55 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 297 463 1.5E-35 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 460 539 2.1E-11 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Gene3D G3DSA:1.10.645.10 168 406 3.2E-57 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Gene3D G3DSA:1.10.645.10 407 538 1.1E-31 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2676 edb703d23e13535b15d48a24015f34d3 571 SUPERFAMILY SSF56762 195 539 1.28E-109 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2676 edb703d23e13535b15d48a24015f34d3 571 SUPERFAMILY SSF143243 13 196 1.24E-44 T 21-04-2016 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 154 6.0E-32 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Pfam PF00374 Nickel-dependent hydrogenase 220 288 5.9E-13 T 21-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 PANTHER PTHR11993 127 546 5.9E-277 T 21-04-2016 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 PANTHER PTHR11993:SF30 127 546 5.9E-277 T 21-04-2016 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 40 155 6.9E-22 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2676 edb703d23e13535b15d48a24015f34d3 571 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 218 229 - T 21-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SDY_1607 c6949e401d505051b14e548682844c7a 120 Gene3D G3DSA:1.10.260.40 30 107 3.4E-28 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1607 c6949e401d505051b14e548682844c7a 120 PANTHER PTHR36924 27 118 8.1E-38 T 21-04-2016 SDY_1607 c6949e401d505051b14e548682844c7a 120 SUPERFAMILY SSF47413 35 114 2.17E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1607 c6949e401d505051b14e548682844c7a 120 SMART SM00530 38 93 6.6E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1607 c6949e401d505051b14e548682844c7a 120 PANTHER PTHR36924:SF2 27 118 8.1E-38 T 21-04-2016 SDY_1607 c6949e401d505051b14e548682844c7a 120 Pfam PF01381 Helix-turn-helix 40 91 4.2E-8 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1607 c6949e401d505051b14e548682844c7a 120 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 31 107 2.1E-26 T 21-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 14 376 1.7E-140 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PANTHER PTHR32195:SF18 14 391 2.0E-168 T 21-04-2016 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PANTHER PTHR32195 14 391 2.0E-168 T 21-04-2016 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 Pfam PF03222 Tryptophan/tyrosine permease family 15 383 6.0E-132 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 25 44 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 308 326 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 213 232 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 176 198 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 274 293 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 70 90 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 136 156 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4204 71ae6b000d729baeafe734ce83706aef 395 PRINTS PR00166 Aromatic amino acid permease signature 329 348 6.0E-86 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00278 446 465 24.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00278 480 499 0.59 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00278 512 531 600.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00278 544 563 38.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 PANTHER PTHR23389 1 531 9.2E-218 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 PIRSF PIRSF001604 1 671 6.3E-255 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00532 3 448 1.5E-293 T 21-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:1.10.150.20 435 502 2.4E-28 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 21-04-2016 IPR018239 NAD-dependent DNA ligase, active site SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 8.2E-142 T 21-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.4E-5 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:1.10.150.20 504 584 6.0E-32 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:1.10.287.610 1 67 1.7E-30 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SMART SM00292 595 670 5.6E-14 T 21-04-2016 IPR001357 BRCT domain SDY_2608 107b32b108b30ab50ade227c96de9a88 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 21-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 6.1E-36 T 21-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SUPERFAMILY SSF50249 318 399 8.39E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:3.30.470.30 119 252 5.9E-50 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:3.40.50.10190 594 669 2.0E-26 T 21-04-2016 IPR001357 BRCT domain SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SUPERFAMILY SSF52113 596 669 3.6E-19 T 21-04-2016 IPR001357 BRCT domain SDY_2608 107b32b108b30ab50ade227c96de9a88 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 7.1E-278 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.2E-23 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 3.9E-11 T 21-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 7.4E-14 T 21-04-2016 IPR001357 BRCT domain SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SUPERFAMILY SSF47781 403 583 8.15E-62 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.742 T 21-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 Gene3D G3DSA:2.40.50.140 319 391 1.1E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2608 107b32b108b30ab50ade227c96de9a88 671 SUPERFAMILY SSF56091 2 316 5.18E-123 T 21-04-2016 SDY_2608 107b32b108b30ab50ade227c96de9a88 671 PANTHER PTHR23389:SF9 1 531 9.2E-218 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 3.2E-17 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 SMART SM00926 39 93 4.0E-14 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615 39 284 0.0 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615 643 828 0.0 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615 345 596 0.0 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:2.40.40.20 666 828 1.5E-45 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 SUPERFAMILY SSF50692 688 828 4.52E-41 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 8.6E-92 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 SUPERFAMILY SSF53706 37 700 1.28E-204 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:3.40.50.740 96 178 1.2E-78 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:3.40.50.740 399 575 1.2E-78 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:3.40.50.740 621 665 1.2E-78 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:2.20.25.90 37 95 2.0E-20 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 21-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:3.40.228.10 179 291 2.3E-57 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Gene3D G3DSA:3.40.228.10 325 398 2.3E-57 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.829 T 21-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 3.9E-24 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.1E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615:SF123 39 284 0.0 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615:SF123 643 828 0.0 T 21-04-2016 SDY_0872 06dea068b9f2b6d9035d288cfa184086 828 PANTHER PTHR11615:SF123 345 596 0.0 T 21-04-2016 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 PANTHER PTHR30251 1 117 3.6E-63 T 21-04-2016 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 PRINTS PR00969 Pili chaperone signature 100 117 6.4E-19 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 PRINTS PR00969 Pili chaperone signature 27 36 6.4E-19 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 PRINTS PR00969 Pili chaperone signature 72 93 6.4E-19 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 Gene3D G3DSA:2.60.40.360 26 115 9.5E-32 T 21-04-2016 IPR008962 PapD-like SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 SUPERFAMILY SSF49354 21 120 1.07E-28 T 21-04-2016 IPR008962 PapD-like SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 PANTHER PTHR30251:SF11 1 117 3.6E-63 T 21-04-2016 SDY_0256 1dee9a77ad7c92f2621520a6f308bb77 121 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 115 1.2E-27 T 21-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SUPERFAMILY SSF52172 1 173 1.12E-37 T 21-04-2016 IPR011006 CheY-like superfamily SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:1.10.10.10 124 221 1.8E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00862 145 220 2.2E-19 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.1E-20 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 PANTHER PTHR26402 1 223 2.8E-166 T 21-04-2016 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:3.40.50.2300 1 122 4.1E-35 T 21-04-2016 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00448 1 112 4.7E-38 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2022 9ee5ab5b0947d03502e5c0eddd90eb2a 223 PANTHER PTHR26402:SF537 1 223 2.8E-166 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 PANTHER PTHR10196:SF65 1 477 5.1E-301 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 PANTHER PTHR10196 1 477 5.1E-301 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 SUPERFAMILY SSF53067 4 216 1.94E-36 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Gene3D G3DSA:3.30.420.40 120 217 6.7E-13 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Gene3D G3DSA:3.30.420.40 1 116 4.5E-22 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 225 418 4.9E-23 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 122 216 4.4E-7 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 109 1.2E-11 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 Gene3D G3DSA:3.30.420.40 220 465 8.3E-41 T 21-04-2016 SDY_2978 1b9e94e77cdbcf9d274fad6a1d5ce207 492 SUPERFAMILY SSF53067 218 455 1.1E-43 T 21-04-2016 SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 PANTHER PTHR10366 3 267 8.9E-76 T 21-04-2016 SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 SUPERFAMILY SSF51735 2 266 4.29E-28 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 Gene3D G3DSA:3.40.50.720 2 99 1.3E-9 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 Gene3D G3DSA:3.40.50.720 100 234 1.3E-11 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 212 5.3E-9 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SDY_2223 82db6be0ae7e60f1a6ebca84d2d802dc 274 PANTHER PTHR10366:SF289 3 267 8.9E-76 T 21-04-2016 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 Pfam PF00890 FAD binding domain 4 399 2.3E-59 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 49.542 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 4.6E-176 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 SUPERFAMILY SSF51905 354 414 1.55E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 SUPERFAMILY SSF51905 1 169 1.55E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 SUPERFAMILY SSF51905 249 323 1.55E-18 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 Gene3D G3DSA:3.50.50.60 254 415 5.1E-21 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 Gene3D G3DSA:3.50.50.60 1 53 5.1E-21 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2437 e001b0907472faddbe9e3c9f6b0c12bf 419 PIRSF PIRSF000141 1 418 1.3E-170 T 21-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 Pfam PF00005 ABC transporter 18 162 2.0E-21 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 Gene3D G3DSA:3.40.50.300 16 231 1.9E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 PANTHER PTHR24220:SF462 2 246 3.7E-159 T 21-04-2016 SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 SMART SM00382 25 224 5.1E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 PANTHER PTHR24220 2 246 3.7E-159 T 21-04-2016 SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 SUPERFAMILY SSF52540 14 226 4.3E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1804 cdfea428da3ddfef589eeea2d2d511a1 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 5 248 46.931 T 21-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 464 485 1.7E-7 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 714 734 7.7E-7 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 559 580 3.0E-9 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 163 186 3.1E-7 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 294 385 2.75E-6 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 196 287 1.44E-5 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843:SF2 6 284 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843:SF2 529 822 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843:SF2 312 507 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 495 584 5.23E-8 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843 6 284 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843 529 822 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 PANTHER PTHR35843 312 507 5.5E-58 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 753 820 1.7E-8 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 217 287 2.1E-4 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 393 489 4.3E-5 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 750 819 4.4E-7 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 4 189 2.7E-47 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 621 736 1.4E-17 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 496 569 6.0E-6 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:2.150.10.10 295 385 3.8E-5 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Gene3D G3DSA:1.20.5.170 570 620 4.2E-9 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 106 132 6.8E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 123 146 1.4E-6 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 93 118 4.3E-4 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 39 62 2.6E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 8 34 3.1E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 630 656 7.0E-7 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 790 816 2.3E-4 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 22 48 1.1E-6 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 Pfam PF05658 Head domain of trimeric autotransporter adhesin 78 104 2.1E-4 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 392 490 8.5E-8 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 5 189 3.4E-36 T 21-04-2016 SDY_4034 01e990d7cb18a1b4b92db00600a15b72 835 SUPERFAMILY SSF101967 612 737 2.48E-17 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 174 257 1.1E-4 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:1.10.10.10 6 88 2.8E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF46785 6 88 2.18E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 89 173 1.0E-7 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF53850 88 290 2.35E-27 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 PANTHER PTHR30126 1 306 9.6E-190 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-25 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 PANTHER PTHR30126:SF18 1 306 9.6E-190 T 21-04-2016 SDY_1885 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.3E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.2E-168 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 PIRSF PIRSF000164 11 336 2.0E-96 T 21-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 1.7E-91 T 21-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.973 T 21-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 SUPERFAMILY SSF51395 1 334 2.02E-103 T 21-04-2016 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 PANTHER PTHR11938 5 332 4.6E-108 T 21-04-2016 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 21-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 21-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SDY_0918 8e03bd91ab56a709bbe61aaa518996ac 336 Gene3D G3DSA:3.20.20.70 1 335 1.6E-124 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_P136 0e536736df0eea8648254ef31153611e 86 PANTHER PTHR18968 1 86 3.1E-54 T 21-04-2016 SDY_P136 0e536736df0eea8648254ef31153611e 86 SUPERFAMILY SSF52518 1 85 8.61E-30 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P136 0e536736df0eea8648254ef31153611e 86 Gene3D G3DSA:3.40.50.970 1 85 1.0E-35 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P136 0e536736df0eea8648254ef31153611e 86 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 85 5.0E-28 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_P136 0e536736df0eea8648254ef31153611e 86 PANTHER PTHR18968:SF116 1 86 3.1E-54 T 21-04-2016 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 3.3E-77 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PRINTS PR00990 Ribokinase signature 220 231 4.9E-37 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PRINTS PR00990 Ribokinase signature 108 121 4.9E-37 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PRINTS PR00990 Ribokinase signature 9 30 4.9E-37 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PRINTS PR00990 Ribokinase signature 36 55 4.9E-37 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PRINTS PR00990 Ribokinase signature 176 191 4.9E-37 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 SUPERFAMILY SSF53613 7 307 4.21E-84 T 21-04-2016 IPR029056 Ribokinase-like SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 300 4.6E-105 T 21-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PANTHER PTHR10584:SF166 1 309 1.6E-105 T 21-04-2016 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 Gene3D G3DSA:3.40.1190.20 7 307 1.9E-95 T 21-04-2016 IPR029056 Ribokinase-like SDY_3995 464d5b1a38282d5bd19169ee0789dbfb 309 PANTHER PTHR10584 1 309 1.6E-105 T 21-04-2016 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 Gene3D G3DSA:3.10.580.10 213 336 4.8E-22 T 21-04-2016 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 PANTHER PTHR24220:SF374 1 233 2.9E-150 T 21-04-2016 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 SMART SM00382 1 183 1.1E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 1 335 1.6E-180 T 21-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 SUPERFAMILY SSF52540 1 211 3.91E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 Pfam PF00571 CBS domain 288 334 1.0E-5 T 21-04-2016 IPR000644 CBS domain SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 Gene3D G3DSA:3.40.50.300 1 205 8.9E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 Pfam PF00005 ABC transporter 1 133 4.5E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 ProSitePatterns PS00211 ABC transporters family signature. 106 120 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 SUPERFAMILY SSF54631 217 335 5.54E-12 T 21-04-2016 SDY_2872 25f259a7a3508026b47bb7ab9aa1b1ac 341 PANTHER PTHR24220 1 233 2.9E-150 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 50.583 T 21-04-2016 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 SUPERFAMILY SSF111369 42 99 8.89E-9 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 Gene3D G3DSA:2.40.50.100 44 77 2.7E-13 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 Gene3D G3DSA:2.40.50.100 204 235 2.7E-13 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 PANTHER PTHR32347 6 325 5.2E-99 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 PANTHER PTHR32347:SF12 6 325 5.2E-99 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 SUPERFAMILY SSF111369 177 324 4.84E-13 T 21-04-2016 SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 319 4.4E-18 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_0808 f7b6b4d72a7038b8ba2fd757a91a5967 332 SUPERFAMILY SSF111369 113 170 1.96E-5 T 21-04-2016 SDY0242a e7fd2303856c136e30b87b4db3ab931d 90 Pfam PF12759 InsA C-terminal domain 42 87 1.9E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY0242a e7fd2303856c136e30b87b4db3ab931d 90 PANTHER PTHR33293:SF2 1 89 7.8E-19 T 21-04-2016 SDY0242a e7fd2303856c136e30b87b4db3ab931d 90 PANTHER PTHR33293 1 89 7.8E-19 T 21-04-2016 SDY0242a e7fd2303856c136e30b87b4db3ab931d 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4482 a2db3859892cc266c5b932dc8d36df4a 136 Pfam PF13007 Transposase C of IS166 homeodomain 40 116 4.2E-11 T 21-04-2016 IPR024463 Transposase TnpC, homeodomain SDY_4482 a2db3859892cc266c5b932dc8d36df4a 136 Gene3D G3DSA:1.20.58.60 4 88 1.3E-5 T 21-04-2016 SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 Pfam PF00563 EAL domain 267 500 9.1E-67 T 21-04-2016 IPR001633 EAL domain SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 PANTHER PTHR33121:SF1 201 517 1.6E-148 T 21-04-2016 SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 Pfam PF12792 CSS motif domain associated with EAL 42 239 1.5E-42 T 21-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 SMART SM00052 260 505 4.7E-106 T 21-04-2016 IPR001633 EAL domain SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 SUPERFAMILY SSF141868 267 514 9.02E-73 T 21-04-2016 IPR001633 EAL domain SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 Gene3D G3DSA:3.20.20.450 267 512 3.2E-76 T 21-04-2016 IPR001633 EAL domain SDY_0903 023285ccd2eb09426f751c8849d55c1b 518 PANTHER PTHR33121 201 517 1.6E-148 T 21-04-2016 SDY_1922 175b5ff33ac4857f61d269ba2ac4e2e4 220 Pfam PF04851 Type III restriction enzyme, res subunit 7 149 1.8E-12 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SDY_1922 175b5ff33ac4857f61d269ba2ac4e2e4 220 SUPERFAMILY SSF52540 2 158 9.27E-24 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1922 175b5ff33ac4857f61d269ba2ac4e2e4 220 Gene3D G3DSA:3.40.50.300 3 149 3.4E-20 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1922 175b5ff33ac4857f61d269ba2ac4e2e4 220 SMART SM00487 2 181 2.2E-11 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0834 748e18833173876002a778c9b24acb79 587 Gene3D G3DSA:1.20.1270.130 295 375 5.6E-38 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 305 513 1.3E-71 T 21-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_0834 748e18833173876002a778c9b24acb79 587 Gene3D G3DSA:3.80.10.10 67 135 8.8E-15 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_0834 748e18833173876002a778c9b24acb79 587 Gene3D G3DSA:3.80.10.10 136 292 7.4E-28 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_0834 748e18833173876002a778c9b24acb79 587 Gene3D G3DSA:1.20.58.360 376 509 7.0E-58 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 Gene3D G3DSA:1.20.58.90 510 582 3.7E-37 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 PANTHER PTHR24365:SF318 67 260 7.1E-18 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 PANTHER PTHR24365:SF318 451 531 7.1E-18 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SUPERFAMILY SSF52058 67 271 3.09E-35 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_0834 748e18833173876002a778c9b24acb79 587 PANTHER PTHR24365 67 260 7.1E-18 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 PANTHER PTHR24365 451 531 7.1E-18 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 Pfam PF12468 Type III secretion system leucine rich repeat protein 5 54 2.2E-13 T 21-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 162 181 4.0E-5 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 142 161 3.5 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 81 100 6.7E-5 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 222 241 0.06 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 101 120 3.6E-4 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 182 201 9.9 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 202 221 0.004 T 21-04-2016 SDY_0834 748e18833173876002a778c9b24acb79 587 SMART SM00364 121 141 0.3 T 21-04-2016 SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.8E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 SUPERFAMILY SSF48498 98 175 3.56E-7 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 PANTHER PTHR30055 1 178 2.6E-98 T 21-04-2016 SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 Gene3D G3DSA:1.10.357.10 8 176 2.0E-32 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 SUPERFAMILY SSF46689 2 81 5.13E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0750 63798c9fda12c5827e27b2d05918bd76 178 PANTHER PTHR30055:SF91 1 178 2.6E-98 T 21-04-2016 SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 203 6.1E-10 T 21-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 133.089 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 PANTHER PTHR34990 2 240 1.2E-136 T 21-04-2016 SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 PANTHER PTHR34990:SF1 2 240 1.2E-136 T 21-04-2016 SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 4.9E-116 T 21-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 Gene3D G3DSA:3.60.21.10 3 125 3.2E-22 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 Gene3D G3DSA:3.60.21.10 173 218 3.2E-22 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0276 7a18a458a762b5be6ce4215ae9d38f14 240 SUPERFAMILY SSF56300 4 239 2.93E-31 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.7E-6 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 PANTHER PTHR24960:SF38 1 85 6.6E-36 T 21-04-2016 SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 PANTHER PTHR24960 1 85 6.6E-36 T 21-04-2016 SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 Gene3D G3DSA:3.30.70.20 5 75 1.0E-17 T 21-04-2016 SDY_2801 57ff2198ff356d4544a454db067f7c7f 86 SUPERFAMILY SSF54862 5 71 1.72E-17 T 21-04-2016 SDY_1248 baa35e60e062130228114acf18a05612 111 SMART SM01120 1 107 1.2E-13 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SDY_1248 baa35e60e062130228114acf18a05612 111 PANTHER PTHR28629 6 111 9.1E-45 T 21-04-2016 SDY_1248 baa35e60e062130228114acf18a05612 111 SUPERFAMILY SSF101473 6 105 4.32E-29 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SDY_1248 baa35e60e062130228114acf18a05612 111 Pfam PF02734 DAK2 domain 6 105 2.3E-31 T 21-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 SUPERFAMILY SSF53697 111 276 5.34E-38 T 21-04-2016 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 SUPERFAMILY SSF46689 4 74 1.51E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 Hamap MF_02108 HTH-type transcriptional regulator MurR [murR]. 1 285 63.422 T 21-04-2016 IPR022821 Transcription regulator HTH, MurR UniPathway: UPA00342 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 Gene3D G3DSA:3.40.50.10490 101 275 2.2E-37 T 21-04-2016 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 PANTHER PTHR30514:SF4 4 275 3.0E-127 T 21-04-2016 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 PANTHER PTHR30514 4 275 3.0E-127 T 21-04-2016 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.8E-26 T 21-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 Pfam PF01380 SIS domain 132 260 1.4E-22 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_2623 632e5d35d74770f851fae32fcd68da5a 285 Gene3D G3DSA:1.10.10.10 3 75 9.9E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PANTHER PTHR11390:SF27 1 37 0.0 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PANTHER PTHR11390:SF27 67 776 0.0 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:1.10.460.10 164 211 8.2E-60 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:1.10.460.10 660 666 8.2E-60 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:1.10.460.10 474 578 8.2E-60 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF01751 Toprim domain 5 142 4.8E-34 T 21-04-2016 IPR006171 Toprim domain SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SMART SM00493 3 132 1.7E-35 T 21-04-2016 IPR006171 Toprim domain SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SUPERFAMILY SSF57783 810 864 7.31E-23 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SMART SM00437 272 527 6.4E-128 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SUPERFAMILY SSF56712 3 609 2.09E-208 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SMART SM00436 133 221 1.2E-48 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PANTHER PTHR11390 1 37 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 PANTHER PTHR11390 67 776 0.0 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:2.20.25.10 809 865 2.5E-32 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:3.30.65.10 745 806 1.5E-26 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:3.30.65.10 708 743 1.7E-11 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:3.30.65.10 588 629 5.1E-11 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.013 T 21-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:2.70.20.10 213 333 1.6E-31 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:2.70.20.10 338 473 4.0E-37 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 1.2E-22 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.5E-12 T 21-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Gene3D G3DSA:3.40.50.140 1 163 2.5E-59 T 21-04-2016 IPR006171 Toprim domain SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SUPERFAMILY SSF57783 744 807 1.87E-19 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 1.1E-268 T 21-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 SUPERFAMILY SSF57783 704 743 6.12E-7 T 21-04-2016 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 6.1E-12 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.2E-6 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_1344 fc325966b5cb42ea5e733486fd0fd0cb 865 Pfam PF01131 DNA topoisomerase 157 565 8.0E-129 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SDY_3650 8d09936bb7f07e63b063bf598adea0c3 108 SMART SM00450 7 102 2.2E-18 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_3650 8d09936bb7f07e63b063bf598adea0c3 108 SUPERFAMILY SSF52821 1 100 6.02E-26 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_3650 8d09936bb7f07e63b063bf598adea0c3 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 32.82 T 21-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SDY_3650 8d09936bb7f07e63b063bf598adea0c3 108 Pfam PF00581 Rhodanese-like domain 11 98 1.0E-11 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_3650 8d09936bb7f07e63b063bf598adea0c3 108 Gene3D G3DSA:3.40.250.10 2 101 2.5E-28 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4249 8e948fdf9cd7062627446a238f121f0f 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 296 1.5E-43 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_4249 8e948fdf9cd7062627446a238f121f0f 323 PANTHER PTHR32196:SF23 1 318 7.2E-210 T 21-04-2016 SDY_4249 8e948fdf9cd7062627446a238f121f0f 323 PANTHER PTHR32196 1 318 7.2E-210 T 21-04-2016 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 Gene3D G3DSA:3.20.20.60 5 255 5.5E-78 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 PANTHER PTHR30502 1 266 1.5E-223 T 21-04-2016 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 9.3E-67 T 21-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 73.378 T 21-04-2016 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 PANTHER PTHR30502:SF5 1 266 1.5E-223 T 21-04-2016 SDY_2440 1ff415557ea2ce26db9060e5d06cbd12 267 SUPERFAMILY SSF51621 4 255 1.81E-79 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 2.1E-32 T 21-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.5E-104 T 21-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 PANTHER PTHR30008 2 455 1.9E-196 T 21-04-2016 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 PANTHER PTHR30008:SF0 2 455 1.9E-196 T 21-04-2016 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 1.1E-141 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SDY_2705 f86b8c71d064bc1ed20e7270e788ecb8 456 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.55 T 21-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 PANTHER PTHR32479:SF9 1 391 5.3E-209 T 21-04-2016 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 1.1E-230 T 21-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 PANTHER PTHR32479 1 391 5.3E-209 T 21-04-2016 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 Pfam PF02754 Cysteine-rich domain 293 376 1.5E-14 T 21-04-2016 IPR004017 Cysteine-rich domain SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 Pfam PF02754 Cysteine-rich domain 163 249 1.1E-15 T 21-04-2016 IPR004017 Cysteine-rich domain SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 Gene3D G3DSA:1.10.1060.10 6 84 5.3E-16 T 21-04-2016 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 SUPERFAMILY SSF46548 6 82 6.45E-17 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_2438 7dbd38e1c35ccea059e5e3c955807a67 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.6E-10 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0312 ce5ce230164415bc1f399ea2169e3282 131 Pfam PF03400 IS1 transposase 2 131 7.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0312 ce5ce230164415bc1f399ea2169e3282 131 PANTHER PTHR33293:SF1 6 126 8.8E-25 T 21-04-2016 SDY_0312 ce5ce230164415bc1f399ea2169e3282 131 PANTHER PTHR33293 6 126 8.8E-25 T 21-04-2016 SDY_1165 ce5ce230164415bc1f399ea2169e3282 131 Pfam PF03400 IS1 transposase 2 131 7.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1165 ce5ce230164415bc1f399ea2169e3282 131 PANTHER PTHR33293:SF1 6 126 8.8E-25 T 21-04-2016 SDY_1165 ce5ce230164415bc1f399ea2169e3282 131 PANTHER PTHR33293 6 126 8.8E-25 T 21-04-2016 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 Gene3D G3DSA:3.40.50.300 10 266 1.9E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1305 efc45fb553f73329686954214bf6eb1e 334 SUPERFAMILY SSF52540 22 264 3.04E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1305 efc45fb553f73329686954214bf6eb1e 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 SMART SM00382 49 242 5.5E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1305 efc45fb553f73329686954214bf6eb1e 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.7E-27 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 Pfam PF00005 ABC transporter 41 192 5.8E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 PANTHER PTHR24220:SF544 13 329 2.7E-199 T 21-04-2016 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 PANTHER PTHR24220 13 329 2.7E-199 T 21-04-2016 SDY_1305 efc45fb553f73329686954214bf6eb1e 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 1.0E-18 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 Pfam PF00892 EamA-like transporter family 24 152 1.1E-20 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 Pfam PF00892 EamA-like transporter family 163 300 7.2E-26 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 PANTHER PTHR22911:SF63 1 306 2.8E-122 T 21-04-2016 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 SUPERFAMILY SSF103481 56 155 1.96E-13 T 21-04-2016 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 SUPERFAMILY SSF103481 200 303 1.83E-16 T 21-04-2016 SDY_3778 7fd55934954a996983e22d9aed14e76e 312 PANTHER PTHR22911 1 306 2.8E-122 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Gene3D G3DSA:3.90.400.10 107 175 3.9E-31 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 7.8E-9 T 21-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357 451 530 4.6E-249 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357 407 419 4.6E-249 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357 5 386 4.6E-249 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 1.1E-126 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 3.5E-265 T 21-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357:SF142 451 530 4.6E-249 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357:SF142 407 419 4.6E-249 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 PANTHER PTHR10357:SF142 5 386 4.6E-249 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 SUPERFAMILY SSF51011 475 549 3.76E-17 T 21-04-2016 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Gene3D G3DSA:3.20.20.80 5 106 7.2E-125 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Gene3D G3DSA:3.20.20.80 176 473 7.2E-125 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 Gene3D G3DSA:2.60.40.1180 476 550 1.5E-19 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 SMART SM00642 15 414 2.3E-157 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_4258 b4cf508a1859529cae3808004cfab3e9 551 SUPERFAMILY SSF51445 5 472 2.11E-153 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_0168 e96bcf539c184ef994badc3550d89066 296 Gene3D G3DSA:3.40.50.1980 34 120 1.6E-31 T 21-04-2016 SDY_0168 e96bcf539c184ef994badc3550d89066 296 PANTHER PTHR30532:SF1 34 295 1.1E-80 T 21-04-2016 SDY_0168 e96bcf539c184ef994badc3550d89066 296 Gene3D G3DSA:3.40.50.1980 124 294 4.2E-65 T 21-04-2016 SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 9.2E-59 T 21-04-2016 IPR008091 Ferrichrome-binding periplasmic protein SDY_0168 e96bcf539c184ef994badc3550d89066 296 Pfam PF01497 Periplasmic binding protein 38 269 3.3E-27 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SDY_0168 e96bcf539c184ef994badc3550d89066 296 PANTHER PTHR30532 34 295 1.1E-80 T 21-04-2016 SDY_0168 e96bcf539c184ef994badc3550d89066 296 SUPERFAMILY SSF53807 34 291 2.63E-58 T 21-04-2016 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 Pfam PF00367 phosphotransferase system, EIIB 13 44 1.5E-12 T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 21-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 PANTHER PTHR30175:SF3 4 474 4.9E-226 T 21-04-2016 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 Pfam PF02378 Phosphotransferase system, EIIC 120 401 9.1E-41 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 PANTHER PTHR30175 4 474 4.9E-226 T 21-04-2016 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 SUPERFAMILY SSF55604 9 81 9.68E-17 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_2625 7d70b330e40a5fa215858694bea7e78d 474 Gene3D G3DSA:3.30.1360.60 7 84 1.8E-20 T 21-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 5.8E-103 T 21-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 Gene3D G3DSA:3.40.50.300 3 243 1.5E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 PANTHER PTHR24220:SF408 6 258 6.6E-127 T 21-04-2016 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 SUPERFAMILY SSF52540 3 238 3.71E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 PANTHER PTHR24220 6 258 6.6E-127 T 21-04-2016 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 Pfam PF00005 ABC transporter 20 181 9.5E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4111 f95c3a637604a3b8d219ceec4a140848 262 SMART SM00382 29 229 3.0E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2327 f5521b076008fa96e1a72b730844546c 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.2E-212 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 Gene3D G3DSA:3.30.930.10 109 462 1.8E-110 T 21-04-2016 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PANTHER PTHR22594 6 180 2.6E-248 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PANTHER PTHR22594 199 464 2.6E-248 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.0E-81 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 SUPERFAMILY SSF55681 98 464 4.38E-95 T 21-04-2016 SDY_2327 f5521b076008fa96e1a72b730844546c 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.269 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PANTHER PTHR22594:SF6 6 180 2.6E-248 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 PANTHER PTHR22594:SF6 199 464 2.6E-248 T 21-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SDY_2327 f5521b076008fa96e1a72b730844546c 466 SUPERFAMILY SSF50249 16 101 1.82E-17 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2327 f5521b076008fa96e1a72b730844546c 466 Gene3D G3DSA:2.40.50.140 16 103 2.0E-16 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2327 f5521b076008fa96e1a72b730844546c 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.8E-12 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SDY_3919 38795d3facf63047ab028f62d0851ef1 206 PANTHER PTHR30086:SF14 1 206 3.5E-119 T 21-04-2016 SDY_3919 38795d3facf63047ab028f62d0851ef1 206 PANTHER PTHR30086 1 206 3.5E-119 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3919 38795d3facf63047ab028f62d0851ef1 206 Pfam PF01810 LysE type translocator 14 202 7.1E-51 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3919 38795d3facf63047ab028f62d0851ef1 206 PIRSF PIRSF006324 1 205 3.4E-55 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3919 38795d3facf63047ab028f62d0851ef1 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 3.6E-61 T 21-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 SDY_0579 a47459434e49380a99ed0672f976eb9f 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 94 2.7E-42 T 21-04-2016 IPR010774 Protein of unknown function DUF1364 SDY_0579 a47459434e49380a99ed0672f976eb9f 96 Gene3D G3DSA:3.30.50.20 19 95 3.6E-41 T 21-04-2016 SDY_1064 488de90e266caaf0a5907246cc39e7d2 100 Gene3D G3DSA:1.10.10.60 9 90 3.1E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1064 488de90e266caaf0a5907246cc39e7d2 100 PANTHER PTHR33215 3 100 3.6E-18 T 21-04-2016 SDY_1064 488de90e266caaf0a5907246cc39e7d2 100 Pfam PF01527 Transposase 3 74 2.1E-16 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1064 488de90e266caaf0a5907246cc39e7d2 100 SUPERFAMILY SSF46689 4 94 4.48E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0101 0c0a874359d0a49563776da9e836041f 523 PANTHER PTHR10277:SF9 1 508 2.3E-259 T 21-04-2016 SDY_0101 0c0a874359d0a49563776da9e836041f 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 5.6E-35 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.1E-259 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 Gene3D G3DSA:3.20.20.70 1 347 8.4E-142 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0101 0c0a874359d0a49563776da9e836041f 523 SUPERFAMILY SSF110921 391 499 6.28E-26 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 SMART SM00917 369 500 3.5E-37 T 21-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.638 T 21-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_0101 0c0a874359d0a49563776da9e836041f 523 PANTHER PTHR10277 1 508 2.3E-259 T 21-04-2016 SDY_0101 0c0a874359d0a49563776da9e836041f 523 Pfam PF00682 HMGL-like 4 273 8.1E-106 T 21-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SDY_0101 0c0a874359d0a49563776da9e836041f 523 SUPERFAMILY SSF51569 1 290 3.85E-97 T 21-04-2016 SDY_0101 0c0a874359d0a49563776da9e836041f 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 21-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 12 758 0.0 T 21-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Gene3D G3DSA:3.40.228.10 182 393 5.4E-62 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Pfam PF01568 Molydopterin dinucleotide binding domain 642 751 4.9E-6 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Gene3D G3DSA:2.40.40.20 641 757 3.3E-8 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Pfam PF00384 Molybdopterin oxidoreductase 108 462 5.3E-29 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 PIRSF PIRSF000144 1 759 0.0 T 21-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 PANTHER PTHR11615:SF114 29 251 8.3E-283 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 PANTHER PTHR11615:SF114 270 757 8.3E-283 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 SUPERFAMILY SSF50692 641 758 1.42E-12 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_1658 eb9620f196ea860896fd32caea837b2d 759 PANTHER PTHR11615 29 251 8.3E-283 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 PANTHER PTHR11615 270 757 8.3E-283 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 SUPERFAMILY SSF53706 46 625 2.88E-147 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Gene3D G3DSA:3.40.50.740 108 181 3.1E-51 T 21-04-2016 SDY_1658 eb9620f196ea860896fd32caea837b2d 759 Gene3D G3DSA:3.40.50.740 394 625 3.1E-51 T 21-04-2016 SDY_4802 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4802 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293 1 89 1.9E-20 T 21-04-2016 SDY_4802 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4802 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293:SF2 1 89 1.9E-20 T 21-04-2016 SDY_4695 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4695 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293 1 89 1.9E-20 T 21-04-2016 SDY_4695 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4695 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293:SF2 1 89 1.9E-20 T 21-04-2016 SDY_4799 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4799 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293 1 89 1.9E-20 T 21-04-2016 SDY_4799 a3e4938e436666ac6d90464a0eba5994 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4799 a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293:SF2 1 89 1.9E-20 T 21-04-2016 SDY_1115a a3e4938e436666ac6d90464a0eba5994 90 Pfam PF12759 InsA C-terminal domain 42 87 2.9E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1115a a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293 1 89 1.9E-20 T 21-04-2016 SDY_1115a a3e4938e436666ac6d90464a0eba5994 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1115a a3e4938e436666ac6d90464a0eba5994 90 PANTHER PTHR33293:SF2 1 89 1.9E-20 T 21-04-2016 SDY_2685 886b6003377b02847b0aa37ca1653c96 248 SUPERFAMILY SSF52540 33 226 8.05E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2685 886b6003377b02847b0aa37ca1653c96 248 PANTHER PTHR30050 19 247 2.7E-122 T 21-04-2016 SDY_2685 886b6003377b02847b0aa37ca1653c96 248 Pfam PF00308 Bacterial dnaA protein 31 227 1.6E-16 T 21-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SDY_2685 886b6003377b02847b0aa37ca1653c96 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 173 1.8E-7 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_2685 886b6003377b02847b0aa37ca1653c96 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 58 78 1.8E-7 T 21-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SDY_2685 886b6003377b02847b0aa37ca1653c96 248 PANTHER PTHR30050:SF5 19 247 2.7E-122 T 21-04-2016 SDY_2685 886b6003377b02847b0aa37ca1653c96 248 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 20 248 57.557 T 21-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae SDY_2685 886b6003377b02847b0aa37ca1653c96 248 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 21 247 1.3E-84 T 21-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 SDY_2685 886b6003377b02847b0aa37ca1653c96 248 Gene3D G3DSA:1.10.8.60 182 247 6.6E-31 T 21-04-2016 SDY_2685 886b6003377b02847b0aa37ca1653c96 248 Gene3D G3DSA:3.40.50.300 16 179 1.5E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Gene3D G3DSA:3.30.1300.30 187 278 1.1E-35 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 PANTHER PTHR35843 1 51 3.0E-71 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 PANTHER PTHR35843 102 278 3.0E-71 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 SUPERFAMILY SSF54523 187 278 1.02E-26 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 SUPERFAMILY SSF54523 114 122 1.02E-26 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Gene3D G3DSA:2.150.10.10 148 179 1.8E-5 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Gene3D G3DSA:2.150.10.10 54 124 2.1E-24 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Pfam PF03895 YadA-like C-terminal region 202 278 3.0E-25 T 21-04-2016 IPR005594 YadA-like, C-terminal SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Gene3D G3DSA:1.20.5.170 1 43 1.8E-4 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Pfam PF05658 Head domain of trimeric autotransporter adhesin 59 85 4.5E-8 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Pfam PF05658 Head domain of trimeric autotransporter adhesin 73 97 4.6E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 SUPERFAMILY SSF101967 141 177 9.42E-7 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 SUPERFAMILY SSF101967 38 124 9.29E-19 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 PANTHER PTHR35843:SF2 1 51 3.0E-71 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 PANTHER PTHR35843:SF2 102 278 3.0E-71 T 21-04-2016 SDY_4035 491af4bcdb2c47a0ef584ef4c6411ad8 278 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 102 122 1.6E-11 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4119 b196b70ccef655055dec171a2cc0298a 252 PANTHER PTHR24220 7 252 1.5E-146 T 21-04-2016 SDY_4119 b196b70ccef655055dec171a2cc0298a 252 Gene3D G3DSA:3.40.50.300 2 249 4.9E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4119 b196b70ccef655055dec171a2cc0298a 252 PIRSF PIRSF037116 1 252 1.5E-140 T 21-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK SDY_4119 b196b70ccef655055dec171a2cc0298a 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 1.4E-123 T 21-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK SDY_4119 b196b70ccef655055dec171a2cc0298a 252 SMART SM00382 30 223 5.2E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4119 b196b70ccef655055dec171a2cc0298a 252 Pfam PF00005 ABC transporter 22 173 8.6E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4119 b196b70ccef655055dec171a2cc0298a 252 PANTHER PTHR24220:SF554 7 252 1.5E-146 T 21-04-2016 SDY_4119 b196b70ccef655055dec171a2cc0298a 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4119 b196b70ccef655055dec171a2cc0298a 252 SUPERFAMILY SSF52540 3 248 7.78E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 PANTHER PTHR30614:SF10 1 221 1.3E-157 T 21-04-2016 SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.8E-17 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 SUPERFAMILY SSF161098 6 200 1.7E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 Gene3D G3DSA:1.10.3720.10 4 214 4.4E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 3.2E-12 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2407 f28446bc706b0545ecf71784caab9ed7 222 PANTHER PTHR30614 1 221 1.3E-157 T 21-04-2016 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 SMART SM00065 218 365 4.9E-12 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 Gene3D G3DSA:3.30.450.40 244 363 3.6E-4 T 21-04-2016 IPR029016 GAF domain-like SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 8.3E-57 T 21-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 PANTHER PTHR34220:SF3 1 561 0.0 T 21-04-2016 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 Pfam PF06580 Histidine kinase 371 448 1.5E-25 T 21-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 Pfam PF13492 GAF domain 243 355 3.2E-6 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 SUPERFAMILY SSF55781 243 359 5.23E-8 T 21-04-2016 IPR029016 GAF domain-like SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 Gene3D G3DSA:3.30.565.10 422 558 1.2E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 PANTHER PTHR34220 1 561 0.0 T 21-04-2016 SDY_2163 06ecb8bcc4c715079c9fe99363b06fbf 561 SUPERFAMILY SSF55874 424 556 8.63E-14 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3440 479995aa2aab326e371deccf96466b6b 91 Pfam PF03811 InsA N-terminal domain 2 36 6.6E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3440 479995aa2aab326e371deccf96466b6b 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3440 479995aa2aab326e371deccf96466b6b 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3440 479995aa2aab326e371deccf96466b6b 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3440 479995aa2aab326e371deccf96466b6b 91 PANTHER PTHR33293 2 91 1.1E-33 T 21-04-2016 SDY_1510 5b910df979240dd43551782008d6a036 653 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 652 0.0 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 Gene3D G3DSA:1.10.460.10 490 607 5.0E-53 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SDY_1510 5b910df979240dd43551782008d6a036 653 Gene3D G3DSA:1.10.460.10 158 217 5.0E-53 T 21-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SDY_1510 5b910df979240dd43551782008d6a036 653 Gene3D G3DSA:2.70.20.10 219 252 3.7E-49 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SDY_1510 5b910df979240dd43551782008d6a036 653 Gene3D G3DSA:2.70.20.10 369 488 3.7E-49 T 21-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SDY_1510 5b910df979240dd43551782008d6a036 653 PANTHER PTHR11390:SF21 521 617 3.9E-204 T 21-04-2016 SDY_1510 5b910df979240dd43551782008d6a036 653 PANTHER PTHR11390:SF21 1 503 3.9E-204 T 21-04-2016 SDY_1510 5b910df979240dd43551782008d6a036 653 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 21-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SDY_1510 5b910df979240dd43551782008d6a036 653 SUPERFAMILY SSF56712 1 607 8.37E-189 T 21-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SDY_1510 5b910df979240dd43551782008d6a036 653 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 647 70.724 T 21-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 SMART SM00493 1 124 2.1E-31 T 21-04-2016 IPR006171 Toprim domain SDY_1510 5b910df979240dd43551782008d6a036 653 SMART SM00436 128 223 7.3E-36 T 21-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 Pfam PF01751 Toprim domain 3 135 3.3E-17 T 21-04-2016 IPR006171 Toprim domain SDY_1510 5b910df979240dd43551782008d6a036 653 Gene3D G3DSA:3.40.50.140 1 152 9.7E-47 T 21-04-2016 IPR006171 Toprim domain SDY_1510 5b910df979240dd43551782008d6a036 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.71E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 7.71E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 7.71E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.71E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 7.71E-26 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PANTHER PTHR11390 521 617 3.9E-204 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 PANTHER PTHR11390 1 503 3.9E-204 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 Pfam PF01131 DNA topoisomerase 158 593 7.5E-114 T 21-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SDY_1510 5b910df979240dd43551782008d6a036 653 SMART SM00437 280 558 1.2E-109 T 21-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 PANTHER PTHR30031 8 540 0.0 T 21-04-2016 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 Gene3D G3DSA:3.40.449.10 22 227 2.0E-88 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 21-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 PIRSF PIRSF006294 3 540 5.2E-234 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 SUPERFAMILY SSF53795 229 540 4.84E-131 T 21-04-2016 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 7.4E-212 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 Gene3D G3DSA:3.90.228.20 228 290 4.6E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 Gene3D G3DSA:3.90.228.20 351 539 4.6E-122 T 21-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 540 3.2E-298 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 SUPERFAMILY SSF68923 9 227 5.93E-91 T 21-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 16 538 56.323 T 21-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SDY_3673 a202e21f692ad4ef5938aff5a4988224 540 PANTHER PTHR30031:SF0 8 540 0.0 T 21-04-2016 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.0E-177 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:3.30.160.20 215 288 1.6E-35 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF03462 PCRF domain 13 203 2.5E-76 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SUPERFAMILY SSF75620 12 353 7.32E-138 T 21-04-2016 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF00472 RF-1 domain 216 321 3.5E-41 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:1.20.58.410 6 93 1.8E-18 T 21-04-2016 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 PANTHER PTHR11075 1 356 5.4E-183 T 21-04-2016 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SMART SM00937 63 178 6.8E-72 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 PANTHER PTHR11075:SF9 1 356 5.4E-183 T 21-04-2016 SDY_1260 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.334 T 21-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 PIRSF PIRSF039090 1 135 6.1E-44 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 129 4.0E-58 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 Pfam PF02561 Flagellar protein FliS 8 124 6.4E-34 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 PANTHER PTHR34773 1 124 1.6E-44 T 21-04-2016 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 SUPERFAMILY SSF101116 8 124 1.24E-33 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SDY_1090 433bc7915ba8ee40c37bc5a038970068 136 Gene3D G3DSA:1.20.120.340 8 124 1.3E-37 T 21-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SDY_1957 d579e1f2d5f3e9fa797dc343a2419992 145 SUPERFAMILY SSF48008 5 140 4.71E-21 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_1957 d579e1f2d5f3e9fa797dc343a2419992 145 Gene3D G3DSA:1.20.120.530 4 143 2.4E-23 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_1957 d579e1f2d5f3e9fa797dc343a2419992 145 SMART SM00895 8 134 3.4E-14 T 21-04-2016 IPR011711 GntR, C-terminal SDY_1957 d579e1f2d5f3e9fa797dc343a2419992 145 Pfam PF07729 FCD domain 9 133 1.6E-24 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 SUPERFAMILY SSF47384 217 291 5.89E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 SMART SM00388 233 293 7.2E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 SMART SM00304 180 232 6.2E-6 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 7.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 7.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 2.1E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 Pfam PF00672 HAMP domain 162 226 3.2E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.8E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 PANTHER PTHR24423 174 438 3.1E-59 T 21-04-2016 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 PANTHER PTHR24423 1 12 3.1E-59 T 21-04-2016 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 Gene3D G3DSA:3.30.565.10 292 443 9.0E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 SUPERFAMILY SSF55874 292 444 3.67E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 Gene3D G3DSA:1.10.287.130 223 288 2.5E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3672 c031d0acd4f2e15d990bf4ae754a41c9 450 SMART SM00387 332 440 2.1E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 21-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 Gene3D G3DSA:3.30.470.10 1 106 4.6E-32 T 21-04-2016 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 SUPERFAMILY SSF56752 3 264 9.42E-70 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 PANTHER PTHR11825:SF55 11 249 5.1E-93 T 21-04-2016 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 Gene3D G3DSA:3.20.10.10 123 262 1.3E-44 T 21-04-2016 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 1.1E-113 T 21-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 PANTHER PTHR11825 11 249 5.1E-93 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_2054 2176bbe56664bf8a3e824940e13c886a 269 Pfam PF01063 Amino-transferase class IV 24 246 1.3E-49 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SMART SM00926 223 277 7.0E-10 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 6 657 3.6E-205 T 21-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 21-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:2.40.40.20 818 892 3.5E-12 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 223 276 9.4E-11 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615 496 682 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615 741 907 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615 366 432 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615 5 322 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:2.20.25.90 229 276 2.6E-14 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615:SF134 496 682 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615:SF134 741 907 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615:SF134 366 432 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 PANTHER PTHR11615:SF134 5 322 0.0 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:3.10.20.30 4 86 6.5E-8 T 21-04-2016 IPR012675 Beta-grasp domain SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SUPERFAMILY SSF53706 221 690 1.2E-82 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Pfam PF00384 Molybdopterin oxidoreductase 564 640 2.3E-7 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SMART SM00929 90 130 1.9E-19 T 21-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SUPERFAMILY SSF54862 83 215 2.97E-34 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 152 162 - T 21-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:3.40.50.740 280 342 8.7E-35 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:3.40.50.740 506 689 8.7E-35 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 80 2.4E-11 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SUPERFAMILY SSF54292 3 79 1.05E-18 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 105 117 - T 21-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:3.30.70.20 149 159 1.9E-4 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Gene3D G3DSA:3.30.70.20 200 228 1.9E-4 T 21-04-2016 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Pfam PF01568 Molydopterin dinucleotide binding domain 831 892 2.9E-6 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 126 8.4E-15 T 21-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SDY_2479 1ebc199cedf1dbeb82c333b366b49836 910 SUPERFAMILY SSF50692 816 893 4.07E-13 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_2055 4be827736f2dec6b962f22bbe106815e 413 PIRSF PIRSF000447 1 413 4.6E-205 T 21-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.5E-62 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SDY_2055 4be827736f2dec6b962f22bbe106815e 413 Gene3D G3DSA:3.40.47.10 2 260 1.3E-75 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 PANTHER PTHR11712 3 412 1.3E-212 T 21-04-2016 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 Gene3D G3DSA:3.40.47.10 263 412 1.1E-63 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 SUPERFAMILY SSF53901 3 252 4.01E-77 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 7.0E-196 T 21-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SDY_2055 4be827736f2dec6b962f22bbe106815e 413 SMART SM00825 Beta-ketoacyl synthase 6 413 1.0E-13 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SDY_2055 4be827736f2dec6b962f22bbe106815e 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.6E-39 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SDY_2055 4be827736f2dec6b962f22bbe106815e 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site SDY_0511 2319878aea96f435668aafe973c6f9c6 209 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 201 3.9E-11 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 Gene3D G3DSA:3.90.470.20 90 111 4.4E-4 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 PRINTS PR01399 Enterobactin synthetase component D signature 76 94 9.38E-22 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 9.38E-22 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 PRINTS PR01399 Enterobactin synthetase component D signature 149 165 9.38E-22 T 21-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 PANTHER PTHR38096 1 209 5.2E-78 T 21-04-2016 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 SUPERFAMILY SSF56214 105 207 1.46E-14 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_0511 2319878aea96f435668aafe973c6f9c6 209 Gene3D G3DSA:3.90.470.20 112 192 8.9E-7 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2657 80a9dd33d587548bf4184d4111abf754 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 4.5E-34 T 21-04-2016 IPR020910 Uncharacterised protein family UPF0370 SDY_2657 80a9dd33d587548bf4184d4111abf754 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.722 T 21-04-2016 IPR020910 Uncharacterised protein family UPF0370 SDY_0739 13dc7c226dd10cafb9038b64bd4ce475 317 SUPERFAMILY SSF161098 27 308 2.9E-57 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0739 13dc7c226dd10cafb9038b64bd4ce475 317 PANTHER PTHR30193:SF5 4 316 1.8E-165 T 21-04-2016 SDY_0739 13dc7c226dd10cafb9038b64bd4ce475 317 PANTHER PTHR30193 4 316 1.8E-165 T 21-04-2016 SDY_0739 13dc7c226dd10cafb9038b64bd4ce475 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 1.6E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0739 13dc7c226dd10cafb9038b64bd4ce475 317 Gene3D G3DSA:1.10.3720.10 26 306 4.9E-51 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 Gene3D G3DSA:3.90.1150.10 270 381 8.0E-36 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 51.065 T 21-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 Pfam PF00155 Aminotransferase class I and II 40 380 2.7E-68 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 Gene3D G3DSA:3.40.640.10 58 269 1.7E-84 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 3.0E-149 T 21-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 SUPERFAMILY SSF53383 3 380 2.86E-111 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 PANTHER PTHR13693:SF53 14 381 8.2E-182 T 21-04-2016 SDY_0830 a51e63b97a6938981855b5bdb56a95bc 384 PANTHER PTHR13693 14 381 8.2E-182 T 21-04-2016 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 PANTHER PTHR10683:SF14 1 216 8.8E-160 T 21-04-2016 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 Gene3D G3DSA:3.20.20.70 1 214 7.3E-64 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 51.946 T 21-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 PANTHER PTHR10683 1 216 8.8E-160 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 Pfam PF00923 Transaldolase 3 206 5.4E-47 T 21-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 1.6E-105 T 21-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 21-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SDY_3781 a357bf43ad6b5ceb1518b467544bf609 220 SUPERFAMILY SSF51569 1 216 9.0E-65 T 21-04-2016 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 Gene3D G3DSA:1.10.3720.10 154 362 1.2E-37 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 PANTHER PTHR30085 65 368 3.7E-191 T 21-04-2016 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 SUPERFAMILY SSF161098 155 347 5.23E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 361 2.9E-26 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 PANTHER PTHR30085:SF3 65 368 3.7E-191 T 21-04-2016 SDY_3447 061c534f8b152975579336eb50a0c3fb 368 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 157 253 6.2E-20 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 5.5E-127 T 21-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 PANTHER PTHR10314:SF100 3 295 1.2E-194 T 21-04-2016 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 Gene3D G3DSA:3.40.50.1100 2 39 8.3E-81 T 21-04-2016 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 Gene3D G3DSA:3.40.50.1100 146 297 8.3E-81 T 21-04-2016 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 PANTHER PTHR10314 3 295 1.2E-194 T 21-04-2016 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 Gene3D G3DSA:3.40.50.1100 40 139 6.4E-40 T 21-04-2016 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 21-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 SUPERFAMILY SSF53686 4 289 5.76E-93 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 1.3E-169 T 21-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SDY_2617 9473c00145ca568b0d9ccb08f8c69be1 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 8.6E-69 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 5.5E-117 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 PANTHER PTHR37689:SF1 4 309 8.3E-119 T 21-04-2016 SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 6.0E-158 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 Gene3D G3DSA:3.90.1670.10 24 307 2.6E-112 T 21-04-2016 IPR024064 FdhE-like SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 SUPERFAMILY SSF144020 24 306 7.85E-100 T 21-04-2016 IPR024064 FdhE-like SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 PANTHER PTHR37689 4 309 8.3E-119 T 21-04-2016 SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 PIRSF PIRSF018296 1 309 1.4E-136 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SDY_3852 d38c6656d31de7f68e17e50ed1942bef 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.387 T 21-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SDY_2449 eaf3107210ba26408e1fe5b102dc059e 175 Gene3D G3DSA:3.90.1150.10 50 174 4.2E-41 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2449 eaf3107210ba26408e1fe5b102dc059e 175 PANTHER PTHR30244:SF3 1 175 4.9E-50 T 21-04-2016 SDY_2449 eaf3107210ba26408e1fe5b102dc059e 175 SUPERFAMILY SSF53383 21 172 1.44E-33 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2449 eaf3107210ba26408e1fe5b102dc059e 175 PANTHER PTHR30244 1 175 4.9E-50 T 21-04-2016 SDY_2449 eaf3107210ba26408e1fe5b102dc059e 175 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 2 170 5.5E-41 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SDY_3247 e349c178fcd866babd9093c88ae551c1 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 486 2.6E-183 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_3247 e349c178fcd866babd9093c88ae551c1 487 PANTHER PTHR10283:SF13 94 487 4.1E-187 T 21-04-2016 IPR030676 Citrate carrier CitT-related SDY_3247 e349c178fcd866babd9093c88ae551c1 487 PANTHER PTHR10283:SF13 1 78 4.1E-187 T 21-04-2016 IPR030676 Citrate carrier CitT-related SDY_3247 e349c178fcd866babd9093c88ae551c1 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 1.1E-166 T 21-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_3247 e349c178fcd866babd9093c88ae551c1 487 PANTHER PTHR10283 94 487 4.1E-187 T 21-04-2016 SDY_3247 e349c178fcd866babd9093c88ae551c1 487 PANTHER PTHR10283 1 78 4.1E-187 T 21-04-2016 SDY_3247 e349c178fcd866babd9093c88ae551c1 487 PIRSF PIRSF002457 2 487 3.6E-131 T 21-04-2016 IPR030676 Citrate carrier CitT-related SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 PANTHER PTHR10851:SF0 1 218 6.7E-114 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 2.6E-105 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 SUPERFAMILY SSF50475 21 218 3.55E-68 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 5.6E-25 T 21-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 PIRSF PIRSF000190 1 218 2.5E-87 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 21-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 PANTHER PTHR10851 1 218 6.7E-114 T 21-04-2016 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 Gene3D G3DSA:2.30.110.10 22 218 7.8E-85 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.5E-19 T 21-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1861 703f9b9778717f8100d9df88d0cc741a 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.941 T 21-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_0566 fbed8142c307ee66c6544209479fc358 279 PANTHER PTHR32552 4 269 2.6E-74 T 21-04-2016 SDY_0566 fbed8142c307ee66c6544209479fc358 279 Pfam PF00665 Integrase core domain 108 223 1.4E-33 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0566 fbed8142c307ee66c6544209479fc358 279 SUPERFAMILY SSF53098 101 263 7.21E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0566 fbed8142c307ee66c6544209479fc358 279 Gene3D G3DSA:3.30.420.10 102 261 4.6E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 Gene3D G3DSA:1.20.1080.10 29 279 1.1E-80 T 21-04-2016 IPR023271 Aquaporin-like SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 Pfam PF01226 Formate/nitrite transporter 20 273 1.7E-61 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 PANTHER PTHR30520 244 282 5.0E-84 T 21-04-2016 SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 PANTHER PTHR30520 1 227 5.0E-84 T 21-04-2016 SDY_2681 610c96f6ab55c41e21539677d4e6f4b0 282 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 279 8.4E-87 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 Gene3D G3DSA:1.10.150.240 17 81 8.0E-36 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 2.8E-21 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 Gene3D G3DSA:3.40.50.1000 3 16 3.3E-36 T 21-04-2016 IPR023214 HAD-like domain SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 Gene3D G3DSA:3.40.50.1000 83 196 3.3E-36 T 21-04-2016 IPR023214 HAD-like domain SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PANTHER PTHR12725 4 188 6.3E-53 T 21-04-2016 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 51 184 1.0E-12 T 21-04-2016 IPR023214 HAD-like domain SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.72E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.72E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.72E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.72E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 PANTHER PTHR12725:SF63 4 188 6.3E-53 T 21-04-2016 SDY_3858 618cb3819b24df24fb52fc06c5473f9c 199 SUPERFAMILY SSF56784 3 194 3.01E-45 T 21-04-2016 IPR023214 HAD-like domain SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF01782 RimM N-terminal domain 16 97 6.6E-27 T 21-04-2016 IPR002676 RimM protein GO:0006364 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50346 106 182 1.63E-19 T 21-04-2016 IPR011033 PRC-barrel-like SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.9E-63 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.30.30.240 106 182 2.8E-29 T 21-04-2016 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 PANTHER PTHR33692:SF1 12 180 8.3E-66 T 21-04-2016 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 PANTHER PTHR33692 12 180 8.3E-66 T 21-04-2016 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.40.30.60 6 100 1.3E-36 T 21-04-2016 IPR002676 RimM protein GO:0006364 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF05239 PRC-barrel domain 104 177 1.7E-9 T 21-04-2016 IPR027275 PRC-barrel domain SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.865 T 21-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SDY_2782 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50447 12 100 4.59E-25 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 PANTHER PTHR13822 1 139 3.4E-50 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:2.60.15.10 3 91 2.8E-30 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.752 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.4E-30 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF46604 88 137 1.36E-15 T 21-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.1E-13 T 21-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:1.20.5.440 92 134 2.8E-25 T 21-04-2016 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 4.0E-41 T 21-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4017 9697dece7ffc23f6ca461bc452f22532 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.1E-48 T 21-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 SUPERFAMILY SSF56935 22 375 5.8E-77 T 21-04-2016 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 Gene3D G3DSA:2.40.160.10 22 375 2.8E-100 T 21-04-2016 IPR023614 Porin domain SDY_0861 460487d6eef3351c6d862f828f874b1a 375 Pfam PF00267 Gram-negative porin 27 375 1.0E-147 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PANTHER PTHR34501:SF1 2 375 5.2E-278 T 21-04-2016 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 327 344 9.8E-19 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 9.8E-19 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 243 255 9.8E-19 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 9.8E-19 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 9.8E-19 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 249 266 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 2.7E-72 T 21-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 SDY_0861 460487d6eef3351c6d862f828f874b1a 375 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 327 343 - T 21-04-2016 IPR013793 Porin, Gram-negative type, conserved site SDY_0861 460487d6eef3351c6d862f828f874b1a 375 PANTHER PTHR34501 2 375 5.2E-278 T 21-04-2016 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 SUPERFAMILY SSF52540 55 582 2.1E-111 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 SMART SM00382 73 365 6.2E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Gene3D G3DSA:3.40.50.300 58 214 3.8E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Pfam PF00271 Helicase conserved C-terminal domain 265 384 7.7E-11 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 PANTHER PTHR18934:SF109 57 683 0.0 T 21-04-2016 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 PANTHER PTHR18934:SF109 720 848 0.0 T 21-04-2016 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Pfam PF00270 DEAD/DEAH box helicase 66 214 6.8E-6 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Gene3D G3DSA:3.40.50.300 252 397 6.2E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 PANTHER PTHR18934 57 683 0.0 T 21-04-2016 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 PANTHER PTHR18934 720 848 0.0 T 21-04-2016 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 580 679 3.8E-16 T 21-04-2016 IPR011709 Domain of unknown function DUF1605 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1278 0.0 T 21-04-2016 IPR010222 RNA helicase HrpA GO:0004004 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Pfam PF11898 Domain of unknown function (DUF3418) 694 1278 4.3E-237 T 21-04-2016 IPR024590 RNA helicase HrpA, C-terminal SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Pfam PF04408 Helicase associated domain (HA2) 447 538 4.4E-17 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 Gene3D G3DSA:3.40.50.300 474 593 1.5E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 SMART SM00847 445 540 1.1E-37 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 SMART SM00490 285 385 1.0E-15 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_1774 a0edfecf8eea7217c21a259f01e1b072 1281 SMART SM00487 56 240 5.0E-27 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0479 dc744fab454245b67afe74913115ff1f 152 Gene3D G3DSA:3.40.50.2020 1 145 8.2E-45 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0479 dc744fab454245b67afe74913115ff1f 152 PANTHER PTHR39563 2 152 6.7E-117 T 21-04-2016 SDY_0479 dc744fab454245b67afe74913115ff1f 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.485 T 21-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SDY_0479 dc744fab454245b67afe74913115ff1f 152 SUPERFAMILY SSF53271 4 144 4.2E-32 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0479 dc744fab454245b67afe74913115ff1f 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 1.5E-15 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SDY_4404 a7551d9574d9115122da96f593f1043b 542 PANTHER PTHR10909 32 464 1.5E-237 T 21-04-2016 SDY_4404 a7551d9574d9115122da96f593f1043b 542 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 188 200 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_4404 a7551d9574d9115122da96f593f1043b 542 Gene3D G3DSA:2.40.110.10 186 277 6.0E-23 T 21-04-2016 SDY_4404 a7551d9574d9115122da96f593f1043b 542 SUPERFAMILY SSF47203 296 447 7.89E-41 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_4404 a7551d9574d9115122da96f593f1043b 542 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_4404 a7551d9574d9115122da96f593f1043b 542 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 1.3E-30 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_4404 a7551d9574d9115122da96f593f1043b 542 PANTHER PTHR10909:SF289 32 464 1.5E-237 T 21-04-2016 SDY_4404 a7551d9574d9115122da96f593f1043b 542 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 280 4.7E-18 T 21-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SDY_4404 a7551d9574d9115122da96f593f1043b 542 Gene3D G3DSA:1.20.140.10 278 448 4.7E-41 T 21-04-2016 SDY_4404 a7551d9574d9115122da96f593f1043b 542 SUPERFAMILY SSF56645 65 283 2.26E-34 T 21-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 PANTHER PTHR30258 14 496 1.5E-273 T 21-04-2016 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 Gene3D G3DSA:3.30.450.90 93 222 1.3E-53 T 21-04-2016 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 SUPERFAMILY SSF160246 13 76 2.62E-13 T 21-04-2016 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 PANTHER PTHR30258:SF9 14 496 1.5E-273 T 21-04-2016 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 Pfam PF00437 Type II/IV secretion system protein 124 389 3.0E-87 T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 Gene3D G3DSA:3.40.50.300 231 494 9.6E-100 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 21-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 SUPERFAMILY SSF52540 106 494 9.66E-102 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3094 009f14f336b1b13bacfc247e9ad90b2a 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 494 7.8E-212 T 21-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 Pfam PF00664 ABC transporter transmembrane region 26 295 3.1E-41 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 PANTHER PTHR24221:SF256 1 584 0.0 T 21-04-2016 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 SMART SM00382 366 557 8.6E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 SUPERFAMILY SSF52540 336 576 3.16E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 PANTHER PTHR24221 1 584 0.0 T 21-04-2016 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 Pfam PF00005 ABC transporter 357 505 1.2E-30 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 Gene3D G3DSA:1.20.1560.10 12 325 2.4E-76 T 21-04-2016 SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 Gene3D G3DSA:3.40.50.300 341 580 1.8E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0386 147f184ab7efbf608d2f5f1434f00424 593 SUPERFAMILY SSF90123 12 325 7.85E-70 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.7E-42 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PIRSF PIRSF000114 1 336 1.8E-101 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.4E-52 T 21-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:1.10.1040.10 184 330 2.3E-58 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 5.9E-52 T 21-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.955 T 21-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 PANTHER PTHR11728 1 339 4.2E-150 T 21-04-2016 SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF51735 8 182 4.4E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:3.40.50.720 9 182 6.7E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4041 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF48179 184 335 8.16E-58 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 PIRSF PIRSF000090 1 256 4.6E-68 T 21-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 SUPERFAMILY SSF52402 1 253 1.4E-60 T 21-04-2016 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 21-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 Pfam PF01012 Electron transfer flavoprotein domain 28 210 4.8E-39 T 21-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 PANTHER PTHR21294:SF7 1 254 8.5E-171 T 21-04-2016 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 SMART SM00893 22 215 4.8E-42 T 21-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 Hamap MF_01055 Protein FixA [fixA]. 1 256 53.74 T 21-04-2016 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 UniPathway: UPA00117 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 PANTHER PTHR21294 1 254 8.5E-171 T 21-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SDY_0063 7f4b8cea76deae688e26ae6fd1e2a2d6 256 Gene3D G3DSA:3.40.50.620 1 254 2.5E-70 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2932 a71de6fc79dbdc44a0873b5245a4f845 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 4.4E-39 T 21-04-2016 IPR020483 Uncharacterised protein family YgbA SDY_2932 a71de6fc79dbdc44a0873b5245a4f845 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 3.0E-52 T 21-04-2016 IPR020483 Uncharacterised protein family YgbA SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 PANTHER PTHR30108 2 188 9.5E-128 T 21-04-2016 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 Gene3D G3DSA:3.40.50.1950 2 188 1.1E-77 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.073 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.0E-70 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 PANTHER PTHR30108:SF10 2 188 9.5E-128 T 21-04-2016 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 SUPERFAMILY SSF52507 2 186 1.83E-59 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_2510 ff72e6c4d0b3faf9e08816a9063573e7 189 Pfam PF02441 Flavoprotein 2 127 1.6E-26 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 303 2.1E-25 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 13 304 3.7E-112 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 13 220 2.6E-78 T 21-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PRINTS PR00151 Porphobilinogen deaminase signature 237 254 1.4E-49 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PRINTS PR00151 Porphobilinogen deaminase signature 150 167 1.4E-49 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 1.4E-49 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PRINTS PR00151 Porphobilinogen deaminase signature 52 72 1.4E-49 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 1.4E-49 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Gene3D G3DSA:3.30.160.40 228 313 2.2E-30 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PANTHER PTHR11557 7 314 8.7E-168 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 PIRSF PIRSF001438 1 318 3.1E-123 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Gene3D G3DSA:3.40.190.10 118 206 6.2E-40 T 21-04-2016 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 SUPERFAMILY SSF53850 12 224 1.2E-85 T 21-04-2016 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 SUPERFAMILY SSF54782 227 315 1.7E-29 T 21-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Gene3D G3DSA:3.40.190.10 10 117 2.8E-48 T 21-04-2016 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 12 304 40.229 T 21-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3941 702c7488c3fc9b9301c8e8a50f279eed 320 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 238 254 - T 21-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 21-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 SMART SM00870 5 323 8.8E-144 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 2.3E-144 T 21-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PANTHER PTHR11707:SF31 1 338 3.6E-267 T 21-04-2016 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.1E-17 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.1E-17 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.1E-17 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 Gene3D G3DSA:3.40.50.1170 5 198 3.5E-79 T 21-04-2016 IPR027474 L-asparaginase, N-terminal SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 Gene3D G3DSA:3.40.50.40 211 336 8.3E-52 T 21-04-2016 IPR027473 L-asparaginase, C-terminal domain SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PIRSF PIRSF500176 2 332 8.2E-121 T 21-04-2016 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PANTHER PTHR11707 1 338 3.6E-267 T 21-04-2016 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.1E-66 T 21-04-2016 IPR027474 L-asparaginase, N-terminal SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 21-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 SUPERFAMILY SSF53774 3 335 1.57E-114 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_1506 ecbde017ba9563b6f21dffedcfad3d29 338 PIRSF PIRSF001220 1 334 3.7E-98 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 SUPERFAMILY SSF53613 61 340 8.73E-52 T 21-04-2016 IPR029056 Ribokinase-like SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.5E-10 T 21-04-2016 SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 PANTHER PTHR10584:SF196 41 339 3.9E-137 T 21-04-2016 SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 Gene3D G3DSA:3.40.1190.20 60 339 1.3E-60 T 21-04-2016 IPR029056 Ribokinase-like SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 Pfam PF00294 pfkB family carbohydrate kinase 58 348 3.8E-65 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 Gene3D G3DSA:1.10.10.10 1 56 5.9E-9 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 SUPERFAMILY SSF46785 1 54 6.17E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2106 ebe5915b976410e5a3455c0b4eb227b8 362 PANTHER PTHR10584 41 339 3.9E-137 T 21-04-2016 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.779 T 21-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 Gene3D G3DSA:2.30.140.10 7 56 2.7E-20 T 21-04-2016 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 PANTHER PTHR11558 7 283 3.9E-124 T 21-04-2016 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 21-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 Pfam PF01564 Spermine/spermidine synthase 7 239 1.6E-87 T 21-04-2016 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.5E-124 T 21-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 SUPERFAMILY SSF53335 7 283 1.03E-86 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0028 1cfa8f8f9b667c4b45bfed73b7578a3d 288 Gene3D G3DSA:3.40.50.150 57 283 6.0E-82 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 Gene3D G3DSA:1.10.10.10 2 133 3.8E-40 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.8E-36 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 21-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 SUPERFAMILY SSF46785 2 131 6.37E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.136 T 21-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 PANTHER PTHR33221 2 141 2.2E-82 T 21-04-2016 SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 Pfam PF02082 Transcriptional regulator 2 82 3.0E-24 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type SDY_4411 bf9857962d63f9a9d1c63b682285a5b6 141 PANTHER PTHR33221:SF4 2 141 2.2E-82 T 21-04-2016 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 355 55.242 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 Gene3D G3DSA:3.90.1150.10 255 352 5.4E-26 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 PANTHER PTHR11751:SF398 8 352 1.3E-103 T 21-04-2016 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 Gene3D G3DSA:3.40.640.10 50 254 5.9E-73 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 21-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 SUPERFAMILY SSF53383 8 352 5.38E-82 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 352 1.9E-127 T 21-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 Pfam PF00155 Aminotransferase class I and II 46 351 1.8E-67 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_2220 83bde17c0e40c70d23f0a57ff11469cd 356 PANTHER PTHR11751 8 352 1.3E-103 T 21-04-2016 SDY_3335 d1085cd555e31f30dc7869b9c267bdd5 167 Gene3D G3DSA:3.40.630.30 17 127 6.0E-19 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3335 d1085cd555e31f30dc7869b9c267bdd5 167 PANTHER PTHR23091 1 166 2.6E-20 T 21-04-2016 SDY_3335 d1085cd555e31f30dc7869b9c267bdd5 167 SUPERFAMILY SSF55729 1 163 9.78E-25 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3335 d1085cd555e31f30dc7869b9c267bdd5 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 123 2.4E-10 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3335 d1085cd555e31f30dc7869b9c267bdd5 167 PANTHER PTHR23091:SF237 1 166 2.6E-20 T 21-04-2016 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 PANTHER PTHR19211:SF7 3 555 0.0 T 21-04-2016 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Gene3D G3DSA:3.40.50.300 322 535 6.1E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Pfam PF00005 ABC transporter 22 191 1.3E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Pfam PF00005 ABC transporter 340 473 1.5E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 PANTHER PTHR19211 3 555 0.0 T 21-04-2016 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 SUPERFAMILY SSF52540 302 526 8.46E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4652 4c6ededf23149235593dabf90ba12dda 555 SUPERFAMILY SSF52540 11 243 2.27E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Gene3D G3DSA:3.40.50.300 141 286 7.6E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Gene3D G3DSA:3.40.50.300 11 109 7.6E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4652 4c6ededf23149235593dabf90ba12dda 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4652 4c6ededf23149235593dabf90ba12dda 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.6E-295 T 21-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD SDY_4652 4c6ededf23149235593dabf90ba12dda 555 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 21-04-2016 IPR032781 ABC-transporter extension domain SDY_4652 4c6ededf23149235593dabf90ba12dda 555 SMART SM00382 348 522 9.2E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4652 4c6ededf23149235593dabf90ba12dda 555 SMART SM00382 31 236 3.5E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 PANTHER PTHR30231 1 215 3.2E-123 T 21-04-2016 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 118.301 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 SUPERFAMILY SSF53098 13 207 1.3E-56 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 8.6E-116 T 21-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 SMART SM00479 18 203 6.0E-42 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 Gene3D G3DSA:3.30.420.10 12 209 3.5E-58 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 PANTHER PTHR30231:SF2 1 215 3.2E-123 T 21-04-2016 SDY_1878 9dcebe8cd0fa98c5462287612727e109 215 Pfam PF00929 Exonuclease 20 194 3.7E-39 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 Gene3D G3DSA:3.40.50.720 140 264 7.8E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.751 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 Gene3D G3DSA:3.40.192.10 7 139 9.2E-52 T 21-04-2016 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 1.2E-68 T 21-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 SUPERFAMILY SSF53223 3 122 7.96E-41 T 21-04-2016 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 SUPERFAMILY SSF51735 123 281 6.33E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 6.6E-40 T 21-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.4E-88 T 21-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 21-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SDY_0281 fd9f4c4c57668d774abfbd26217c140e 288 PANTHER PTHR10025 1 287 1.8E-180 T 21-04-2016 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 PANTHER PTHR11019 18 160 2.0E-40 T 21-04-2016 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 SMART SM00342 70 153 9.6E-16 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 Gene3D G3DSA:1.10.10.60 108 156 7.7E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 Pfam PF12833 Helix-turn-helix domain 76 154 1.6E-17 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 SUPERFAMILY SSF46689 107 157 1.47E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 PANTHER PTHR11019:SF68 18 160 2.0E-40 T 21-04-2016 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 SUPERFAMILY SSF46689 52 103 3.58E-9 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0380 df53f81fcaf43f7db2615684b98e919a 160 Gene3D G3DSA:1.10.10.60 46 107 1.7E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 PANTHER PTHR30160:SF8 1 308 2.4E-175 T 21-04-2016 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 PANTHER PTHR30160 1 308 2.4E-175 T 21-04-2016 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 Gene3D G3DSA:3.40.50.2000 165 313 4.4E-37 T 21-04-2016 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 313 1.5E-80 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 Gene3D G3DSA:3.40.50.2000 1 159 3.8E-32 T 21-04-2016 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 316 2.0E-129 T 21-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SDY_4053 47184ff7f86b7b812678219cd0e18ad0 319 SUPERFAMILY SSF53756 1 316 6.67E-73 T 21-04-2016 SDY_4772 f5f9dcf01c836470908a08721c97f23b 90 Pfam PF12759 InsA C-terminal domain 42 87 8.8E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4772 f5f9dcf01c836470908a08721c97f23b 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_4772 f5f9dcf01c836470908a08721c97f23b 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_4772 f5f9dcf01c836470908a08721c97f23b 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 PIRSF PIRSF006091 1 203 2.2E-70 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 SMART SM00900 99 191 1.5E-36 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 PANTHER PTHR36118:SF1 1 206 2.7E-81 T 21-04-2016 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 PANTHER PTHR36118 1 206 2.7E-81 T 21-04-2016 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.937 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 1.6E-69 T 21-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 SDY_1854 ef9b529ec1e9b044f7fbe1963ba8ce38 206 Pfam PF04205 FMN-binding domain 99 187 2.9E-19 T 21-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 Gene3D G3DSA:3.30.360.10 143 350 8.5E-77 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 Gene3D G3DSA:3.40.50.720 1 142 4.9E-67 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 PANTHER PTHR10174 201 366 4.4E-160 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 PANTHER PTHR10174 103 179 4.4E-160 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 PIRSF PIRSF000148 1 367 2.6E-71 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 SUPERFAMILY SSF55347 134 354 1.37E-78 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.8E-61 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 119 6.0E-24 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 PANTHER PTHR10174:SF116 201 366 4.4E-160 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 PANTHER PTHR10174:SF116 103 179 4.4E-160 T 21-04-2016 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 4.2E-226 T 21-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 SMART SM00859 3 122 2.3E-24 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 21-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 SUPERFAMILY SSF51735 1 147 2.05E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3579 206a5935f6de6d7705e697931e6c0a67 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.273 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 21-04-2016 IPR023673 Ribosomal protein L1, conserved site SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.5E-52 T 21-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.40.50.790 69 159 4.7E-41 T 21-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.432 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 PANTHER PTHR23105 21 229 5.9E-82 T 21-04-2016 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 PIRSF PIRSF002155 1 227 1.9E-78 T 21-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 PANTHER PTHR23105:SF5 21 229 5.9E-82 T 21-04-2016 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 161 225 5.0E-47 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 17 68 5.0E-47 T 21-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.7E-107 T 21-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SDY_3744 aa221aaeffc9e9506e602943921ef46a 234 SUPERFAMILY SSF56808 6 225 4.45E-83 T 21-04-2016 IPR023674 Ribosomal protein L1-like SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 PANTHER PTHR32125 1 228 4.3E-125 T 21-04-2016 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 122.122 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.5E-113 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 SUPERFAMILY SSF75217 1 247 4.71E-103 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 Gene3D G3DSA:3.40.1280.10 1 160 5.7E-68 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.6E-73 T 21-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 Gene3D G3DSA:1.10.1270.20 161 251 3.3E-38 T 21-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 PIRSF PIRSF000386 1 253 6.4E-105 T 21-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SDY_2781 2ada1d8c9a5eb60c0809f05c5353ff39 255 PANTHER PTHR32125:SF1 1 228 4.3E-125 T 21-04-2016 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:3.30.160.20 153 223 8.7E-29 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:1.10.1520.10 6 148 2.3E-48 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00535 21 149 9.5E-60 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF69065 5 159 1.69E-50 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 PANTHER PTHR11207 4 225 3.5E-112 T 21-04-2016 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.6E-33 T 21-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 9.9E-15 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.2E-74 T 21-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF54768 109 223 2.04E-27 T 21-04-2016 SDY_2808 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00358 156 224 9.1E-24 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PANTHER PTHR11958 10 414 5.0E-270 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PANTHER PTHR11958:SF68 10 414 5.0E-270 T 21-04-2016 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 SUPERFAMILY SSF118215 18 400 7.45E-95 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 7.7E-63 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 35.748 T 21-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 Gene3D G3DSA:1.10.3860.10 12 404 6.3E-85 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.5E-10 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.5E-10 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 1.5E-10 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_3274 8b4c53a0e669743f9c12792fa32a07b8 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.5E-10 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_0489 88104e1082bf475410b3a78ba86ab9b4 458 PANTHER PTHR11785:SF365 9 458 0.0 T 21-04-2016 SDY_0489 88104e1082bf475410b3a78ba86ab9b4 458 Pfam PF00324 Amino acid permease 27 452 1.7E-116 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_0489 88104e1082bf475410b3a78ba86ab9b4 458 PIRSF PIRSF006060 4 457 9.5E-77 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0489 88104e1082bf475410b3a78ba86ab9b4 458 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_0489 88104e1082bf475410b3a78ba86ab9b4 458 PANTHER PTHR11785 9 458 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 Gene3D G3DSA:3.40.140.10 139 275 4.8E-49 T 21-04-2016 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 SUPERFAMILY SSF53927 22 275 5.11E-81 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 277 1.4E-101 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 Gene3D G3DSA:3.10.20.10 40 125 5.0E-32 T 21-04-2016 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 PIRSF PIRSF015626 4 277 1.4E-81 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 Pfam PF02634 FdhD/NarQ family 38 275 3.9E-71 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 PANTHER PTHR30592:SF1 5 275 1.1E-132 T 21-04-2016 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 Hamap MF_00187 Protein FdhD [fdhD]. 7 276 37.333 T 21-04-2016 IPR003786 Protein FdhD GO:0016783 SDY_3848 29b6ad74f97e36d88981c4b8987b69cb 277 PANTHER PTHR30592 5 275 1.1E-132 T 21-04-2016 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 PANTHER PTHR30579:SF4 6 301 6.6E-237 T 21-04-2016 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 SUPERFAMILY SSF46785 9 88 2.78E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 SUPERFAMILY SSF53850 96 292 4.34E-29 T 21-04-2016 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.1E-18 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 PANTHER PTHR30579 6 301 6.6E-237 T 21-04-2016 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 Pfam PF03466 LysR substrate binding domain 97 281 3.7E-27 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 Gene3D G3DSA:3.40.190.10 96 190 2.4E-15 T 21-04-2016 SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 Gene3D G3DSA:1.10.10.10 10 89 1.7E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2485 e83975bc4712cfaf1a35178db600d65f 312 Gene3D G3DSA:3.40.190.10 191 246 2.4E-9 T 21-04-2016 SDY_2296 2c5c4e960f7fe71162a481946c3a4f4e 100 Gene3D G3DSA:1.10.10.60 7 90 7.0E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2296 2c5c4e960f7fe71162a481946c3a4f4e 100 Pfam PF01527 Transposase 2 74 4.0E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2296 2c5c4e960f7fe71162a481946c3a4f4e 100 PANTHER PTHR33215:SF4 1 100 2.0E-60 T 21-04-2016 SDY_2296 2c5c4e960f7fe71162a481946c3a4f4e 100 SUPERFAMILY SSF46689 1 93 3.05E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2296 2c5c4e960f7fe71162a481946c3a4f4e 100 PANTHER PTHR33215 1 100 2.0E-60 T 21-04-2016 SDY_3520 0f571455a5fe1d28174f9927e3bdef6f 696 Pfam PF13515 Fusaric acid resistance protein-like 377 498 3.8E-19 T 21-04-2016 SDY_3520 0f571455a5fe1d28174f9927e3bdef6f 696 PANTHER PTHR30509:SF4 1 696 0.0 T 21-04-2016 SDY_3520 0f571455a5fe1d28174f9927e3bdef6f 696 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 3.6E-74 T 21-04-2016 IPR032692 Integral membrane protein YccS, N-terminal SDY_3520 0f571455a5fe1d28174f9927e3bdef6f 696 PANTHER PTHR30509 1 696 0.0 T 21-04-2016 SDY_3520 0f571455a5fe1d28174f9927e3bdef6f 696 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 675 5.9E-277 T 21-04-2016 IPR010020 Integral membrane protein, YccS/YhfK SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 PANTHER PTHR10293 2 115 3.5E-60 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 PIRSF PIRSF005894 1 108 1.0E-52 T 21-04-2016 IPR014434 Monothiol glutaredoxin SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 Gene3D G3DSA:3.40.30.10 8 102 2.8E-32 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 SUPERFAMILY SSF52833 2 104 1.99E-35 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.7E-47 T 21-04-2016 IPR004480 Monothiol glutaredoxin-related SDY_1880 9e5e4071a9d1b9e3765784083543f591 115 Pfam PF00462 Glutaredoxin 17 81 1.7E-18 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 SUPERFAMILY SSF50129 3 165 1.98E-47 T 21-04-2016 IPR011032 GroES-like SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 PANTHER PTHR11695:SF501 1 309 8.5E-145 T 21-04-2016 SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 Gene3D G3DSA:3.40.50.720 159 275 1.8E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 SUPERFAMILY SSF51735 129 297 1.36E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 Gene3D G3DSA:3.90.180.10 2 158 7.2E-51 T 21-04-2016 IPR011032 GroES-like SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 51 65 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 Pfam PF00107 Zinc-binding dehydrogenase 167 289 1.2E-24 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 14 126 1.4E-29 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_1493 5dd95f6a7fdafe69929e2a7501587931 335 PANTHER PTHR11695 1 309 8.5E-145 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_P218 241e60dc2d2c4665c23e714bfa387e33 76 SUPERFAMILY SSF81340 3 74 7.46E-8 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_P218 241e60dc2d2c4665c23e714bfa387e33 76 Pfam PF00654 Voltage gated chloride channel 11 73 1.8E-6 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_P218 241e60dc2d2c4665c23e714bfa387e33 76 PANTHER PTHR11689:SF96 5 75 2.2E-17 T 21-04-2016 SDY_P218 241e60dc2d2c4665c23e714bfa387e33 76 PANTHER PTHR11689 5 75 2.2E-17 T 21-04-2016 SDY_P218 241e60dc2d2c4665c23e714bfa387e33 76 Gene3D G3DSA:1.10.3080.10 2 67 3.3E-6 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_4674 49543304d03f0406dca52b3b5d0cb20a 84 PANTHER PTHR33293:SF2 1 83 1.5E-14 T 21-04-2016 SDY_4674 49543304d03f0406dca52b3b5d0cb20a 84 Pfam PF12759 InsA C-terminal domain 42 81 4.8E-22 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4674 49543304d03f0406dca52b3b5d0cb20a 84 PANTHER PTHR33293 1 83 1.5E-14 T 21-04-2016 SDY_4674 49543304d03f0406dca52b3b5d0cb20a 84 Pfam PF03811 InsA N-terminal domain 1 35 8.6E-24 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 PANTHER PTHR10438:SF266 11 139 1.7E-65 T 21-04-2016 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 PANTHER PTHR10438 11 139 1.7E-65 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 4.5E-37 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 SUPERFAMILY SSF52833 24 138 2.0E-38 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 21-04-2016 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 21-04-2016 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 21-04-2016 SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 Gene3D G3DSA:3.40.30.10 31 138 8.1E-37 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2825 e9d50cfbfaea17e8ebb59f9add77f07a 139 Pfam PF00085 Thioredoxin 37 137 1.6E-28 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 4.9E-184 T 21-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 Gene3D G3DSA:3.40.50.2000 1 239 1.6E-74 T 21-04-2016 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 SUPERFAMILY SSF53756 2 455 1.67E-148 T 21-04-2016 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 Gene3D G3DSA:3.40.50.2000 244 435 1.4E-75 T 21-04-2016 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 PANTHER PTHR10788 1 473 4.1E-206 T 21-04-2016 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 Pfam PF00982 Glycosyltransferase family 20 17 452 9.7E-153 T 21-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 SDY_1193 1446729bec3da4ae5a0b090583def8a9 474 PANTHER PTHR10788:SF6 1 473 4.1E-206 T 21-04-2016 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Gene3D G3DSA:1.10.940.10 3 135 6.6E-45 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 3.1E-45 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 PANTHER PTHR11078 1 139 1.1E-56 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 SUPERFAMILY SSF48013 3 134 2.35E-42 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.572 T 21-04-2016 IPR011605 NusB antitermination factor GO:0006353 SDY_0318 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Pfam PF01029 NusB family 7 131 3.7E-35 T 21-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 SMART SM00861 591 784 1.6E-65 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 PANTHER PTHR23152 1 933 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.0E-15 T 21-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 PIRSF PIRSF000157 1 932 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 788 930 3.0E-54 T 21-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Pfam PF00676 Dehydrogenase E1 component 218 511 6.1E-49 T 21-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 SUPERFAMILY SSF52518 575 791 4.04E-52 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 PANTHER PTHR23152:SF4 1 933 0.0 T 21-04-2016 SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 4.6E-67 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Gene3D G3DSA:3.40.50.970 162 550 8.3E-79 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 SUPERFAMILY SSF52518 121 546 1.03E-88 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 Gene3D G3DSA:3.40.50.970 592 787 3.1E-26 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0664 8a0600b8a62f60726af3d940d31c5524 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 21-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 174.591 T 21-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 PANTHER PTHR33866 15 84 7.7E-172 T 21-04-2016 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 4.3E-148 T 21-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 SUPERFAMILY SSF56276 112 173 5.1E-23 T 21-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 SUPERFAMILY SSF56276 41 84 5.1E-23 T 21-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 PIRSF PIRSF001356 1 263 1.2E-155 T 21-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 PANTHER PTHR33866:SF1 112 263 7.7E-172 T 21-04-2016 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 PANTHER PTHR33866 112 263 7.7E-172 T 21-04-2016 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 PANTHER PTHR33866:SF1 15 84 7.7E-172 T 21-04-2016 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 Gene3D G3DSA:3.60.90.10 33 186 5.3E-47 T 21-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_0027 d8df345fa00c14d97a6bffce3c35046f 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.4E-30 T 21-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 SUPERFAMILY SSF52172 3 132 1.85E-37 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 SMART SM00862 150 226 4.5E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 Gene3D G3DSA:1.10.10.10 137 227 1.0E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 SMART SM00448 4 115 9.7E-37 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 PANTHER PTHR26402 4 229 2.2E-166 T 21-04-2016 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.5E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 Gene3D G3DSA:3.40.50.2300 2 136 1.8E-36 T 21-04-2016 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 SUPERFAMILY SSF46894 126 226 1.25E-24 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4659 1fc4a92c1e1892d96c1d247a9d864b97 229 PANTHER PTHR26402:SF573 4 229 2.2E-166 T 21-04-2016 SDY_0332a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0332a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_0332a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_0332a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0699a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0699a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_0699a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_0699a 7a5abd874f2d1d5bf2ed14cfdd3a56dd 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 Gene3D G3DSA:1.10.150.130 111 204 3.1E-6 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 Pfam PF13356 Domain of unknown function (DUF4102) 16 99 3.8E-16 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 SUPERFAMILY SSF56349 111 393 7.65E-49 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 Pfam PF00589 Phage integrase family 218 381 1.0E-20 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 PANTHER PTHR30629:SF4 10 405 2.4E-98 T 21-04-2016 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 PANTHER PTHR30629 10 405 2.4E-98 T 21-04-2016 SDY_1380 14ee4e99a8c0c81dd0425d280824a3b0 409 Gene3D G3DSA:1.10.443.10 216 388 1.6E-29 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.835 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 SUPERFAMILY SSF51735 162 315 2.02E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 PIRSF PIRSF000445 1 418 9.9E-155 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 SUPERFAMILY SSF69075 317 417 2.75E-27 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 2.2E-23 T 21-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 Gene3D G3DSA:3.40.50.720 184 358 1.6E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.0E-49 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 PANTHER PTHR21089 272 359 1.9E-153 T 21-04-2016 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 PANTHER PTHR21089 40 256 1.9E-153 T 21-04-2016 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 6.8E-171 T 21-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 21-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 SUPERFAMILY SSF69742 1 158 3.27E-47 T 21-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 9.5E-49 T 21-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 PANTHER PTHR21089:SF3 272 359 1.9E-153 T 21-04-2016 SDY_1259 f599e4c0f39a64fb473b78f9434e7b77 418 PANTHER PTHR21089:SF3 40 256 1.9E-153 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 Gene3D G3DSA:3.40.720.10 56 156 1.5E-22 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 ProSitePatterns PS00523 Sulfatases signature 1. 130 142 - T 21-04-2016 IPR024607 Sulfatase, conserved site SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 SUPERFAMILY SSF53649 109 154 2.47E-19 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 SUPERFAMILY SSF53649 56 82 2.47E-19 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342 99 161 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342 56 71 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342 7 32 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342:SF199 99 161 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342:SF199 56 71 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 PANTHER PTHR10342:SF199 7 32 6.7E-24 T 21-04-2016 SDY_1661 db7c9faf504e3fb6c7680a5edf1fa5e1 161 Pfam PF00884 Sulfatase 58 157 7.2E-19 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.1E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 SUPERFAMILY SSF54862 38 325 3.18E-71 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 PANTHER PTHR11938 34 73 5.6E-95 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 PANTHER PTHR11938 99 213 5.6E-95 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 Gene3D G3DSA:3.30.70.20 117 149 3.0E-12 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 Gene3D G3DSA:3.30.70.20 150 187 4.7E-9 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 PANTHER PTHR11938:SF68 34 73 5.6E-95 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 PANTHER PTHR11938:SF68 99 213 5.6E-95 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 Pfam PF13247 4Fe-4S dicluster domain 105 207 5.1E-23 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 Gene3D G3DSA:3.30.70.20 188 228 1.6E-24 T 21-04-2016 SDY_3077 4ecad830dc91fde7ebad69ffd3d02b98 328 Gene3D G3DSA:3.30.70.20 38 116 1.6E-24 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 Gene3D G3DSA:3.40.190.10 174 319 1.2E-29 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 SUPERFAMILY SSF53850 49 590 3.8E-107 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 Gene3D G3DSA:3.10.105.10 320 558 3.2E-44 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 PIRSF PIRSF002741 3 592 5.9E-181 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 Gene3D G3DSA:3.90.76.10 90 173 9.6E-14 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 PANTHER PTHR30290 1 354 3.8E-250 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 PANTHER PTHR30290 379 599 3.8E-250 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 504 6.3E-69 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 PANTHER PTHR30290:SF2 1 354 3.8E-250 T 21-04-2016 SDY_0902 c0b1816b05a8dae95da693196102dd3b 604 PANTHER PTHR30290:SF2 379 599 3.8E-250 T 21-04-2016 SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 Gene3D G3DSA:3.30.70.1400 27 112 7.8E-34 T 21-04-2016 SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 49.311 T 21-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 SUPERFAMILY SSF101790 244 325 1.24E-25 T 21-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 PANTHER PTHR22602 1 315 8.0E-78 T 21-04-2016 SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 1.2E-8 T 21-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 251 6.3E-26 T 21-04-2016 IPR017703 YgfZ/GcvT conserved site SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 PANTHER PTHR22602:SF0 1 315 8.0E-78 T 21-04-2016 SDY_3184 c7fb5569fba5ba05868dc827d27f1438 326 SUPERFAMILY SSF103025 6 242 2.04E-67 T 21-04-2016 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 2.2E-144 T 21-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 PANTHER PTHR30026:SF3 1 453 6.3E-178 T 21-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 SUPERFAMILY SSF56954 25 447 4.97E-100 T 21-04-2016 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 Gene3D G3DSA:1.20.1600.10 15 434 5.2E-95 T 21-04-2016 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 PANTHER PTHR30026 1 453 6.3E-178 T 21-04-2016 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 Pfam PF02321 Outer membrane efflux protein 26 209 1.3E-26 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SDY_3205 73c11880d5e15b9debcf52c7899c2c68 493 Pfam PF02321 Outer membrane efflux protein 232 427 4.5E-33 T 21-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 PANTHER PTHR30327:SF1 1 187 1.6E-73 T 21-04-2016 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 PANTHER PTHR30327 1 187 1.6E-73 T 21-04-2016 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.617 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.30.70.1300 41 130 7.3E-29 T 21-04-2016 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 9.9E-50 T 21-04-2016 IPR003774 Protein of unknown function UPF0301 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 2 40 7.9E-36 T 21-04-2016 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 131 177 7.9E-36 T 21-04-2016 SDY_3124 fb8570c0e78a414e59aca3a077fd1ffa 187 SUPERFAMILY SSF143456 1 187 4.84E-66 T 21-04-2016 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 Gene3D G3DSA:1.20.1300.10 1 119 1.5E-55 T 21-04-2016 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 Pfam PF02313 Fumarate reductase subunit D 6 116 6.5E-52 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 PIRSF PIRSF000179 1 119 3.4E-53 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.602 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 SUPERFAMILY SSF81343 1 119 2.62E-53 T 21-04-2016 SDY_4395 b715da47d04f9735194c841a1b3d28d5 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 106 8.0E-47 T 21-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 SDY_2279 9349b0c023e13e5b28da19a2c598a33c 90 PANTHER PTHR33677:SF1 1 90 1.7E-71 T 21-04-2016 SDY_2279 9349b0c023e13e5b28da19a2c598a33c 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.3E-19 T 21-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SDY_2279 9349b0c023e13e5b28da19a2c598a33c 90 PANTHER PTHR33677 1 90 1.7E-71 T 21-04-2016 SDY_4380 09f4ad6a6558bebe967bd3ae30f58472 324 SUPERFAMILY SSF103481 227 312 4.84E-5 T 21-04-2016 SDY_4380 09f4ad6a6558bebe967bd3ae30f58472 324 PANTHER PTHR12715:SF21 4 323 1.2E-200 T 21-04-2016 SDY_4380 09f4ad6a6558bebe967bd3ae30f58472 324 SUPERFAMILY SSF103481 42 139 1.7E-8 T 21-04-2016 SDY_4380 09f4ad6a6558bebe967bd3ae30f58472 324 Pfam PF00892 EamA-like transporter family 6 128 3.8E-15 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_4380 09f4ad6a6558bebe967bd3ae30f58472 324 PANTHER PTHR12715 4 323 1.2E-200 T 21-04-2016 SDY_2330 43c51c44121a845983c3dd8f2202983e 215 SMART SM00849 12 192 2.6E-42 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2330 43c51c44121a845983c3dd8f2202983e 215 SUPERFAMILY SSF56281 2 209 2.03E-60 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2330 43c51c44121a845983c3dd8f2202983e 215 PANTHER PTHR11935:SF115 1 212 1.1E-138 T 21-04-2016 SDY_2330 43c51c44121a845983c3dd8f2202983e 215 PANTHER PTHR11935 1 212 1.1E-138 T 21-04-2016 SDY_2330 43c51c44121a845983c3dd8f2202983e 215 Gene3D G3DSA:3.60.15.10 2 210 1.0E-66 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2330 43c51c44121a845983c3dd8f2202983e 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 3.8E-32 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_4792 6700641465b49ead62c368a0f62f44e9 90 Pfam PF03811 InsA N-terminal domain 1 35 1.5E-21 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4792 6700641465b49ead62c368a0f62f44e9 90 PANTHER PTHR33293 1 89 2.1E-18 T 21-04-2016 SDY_4792 6700641465b49ead62c368a0f62f44e9 90 PANTHER PTHR33293:SF2 1 89 2.1E-18 T 21-04-2016 SDY_4792 6700641465b49ead62c368a0f62f44e9 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4786 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293 1 89 3.5E-20 T 21-04-2016 SDY_4786 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4786 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293:SF2 1 89 3.5E-20 T 21-04-2016 SDY_4786 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4819 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293 1 89 3.5E-20 T 21-04-2016 SDY_4819 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4819 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293:SF2 1 89 3.5E-20 T 21-04-2016 SDY_4819 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4796 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293 1 89 3.5E-20 T 21-04-2016 SDY_4796 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF12759 InsA C-terminal domain 42 87 2.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4796 61601d95d10a20fe14e37a49ca6e8c89 90 PANTHER PTHR33293:SF2 1 89 3.5E-20 T 21-04-2016 SDY_4796 61601d95d10a20fe14e37a49ca6e8c89 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4378 0c625ea629b944a8bfa50967e063bd0c 470 PANTHER PTHR11785 1 464 6.4E-223 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4378 0c625ea629b944a8bfa50967e063bd0c 470 Pfam PF00324 Amino acid permease 27 468 2.5E-124 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_4378 0c625ea629b944a8bfa50967e063bd0c 470 PIRSF PIRSF006060 1 469 7.4E-69 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4378 0c625ea629b944a8bfa50967e063bd0c 470 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_4378 0c625ea629b944a8bfa50967e063bd0c 470 PANTHER PTHR11785:SF336 1 464 6.4E-223 T 21-04-2016 SDY_2630 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 3.0E-110 T 21-04-2016 IPR010938 Protein of unknown function DUF1131 SDY_2630 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 3.7E-82 T 21-04-2016 IPR010938 Protein of unknown function DUF1131 SDY_2630 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 Gene3D G3DSA:2.60.460.10 26 191 2.1E-84 T 21-04-2016 SDY_3369 4de2814dddcf51156be20c8fa840836a 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 2.5E-34 T 21-04-2016 SDY_3369 4de2814dddcf51156be20c8fa840836a 92 SUPERFAMILY SSF47413 3 72 1.46E-28 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3369 4de2814dddcf51156be20c8fa840836a 92 Gene3D G3DSA:1.10.260.40 6 72 2.8E-37 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 SUPERFAMILY SSF52343 256 394 4.71E-37 T 21-04-2016 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Pfam PF00042 Globin 7 103 7.3E-15 T 21-04-2016 IPR000971 Globin GO:0019825|GO:0020037 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Gene3D G3DSA:2.40.30.10 149 254 7.8E-33 T 21-04-2016 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 PANTHER PTHR22924 1 396 4.2E-128 T 21-04-2016 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 8.8E-17 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Gene3D G3DSA:1.10.490.10 2 140 1.6E-54 T 21-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.328 T 21-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 SUPERFAMILY SSF46458 1 142 3.49E-38 T 21-04-2016 IPR009050 Globin-like SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 2.3E-9 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 SUPERFAMILY SSF63380 148 253 4.43E-29 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 Gene3D G3DSA:3.40.50.80 259 394 3.2E-35 T 21-04-2016 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.5E-6 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 4.5E-6 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.5E-6 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_2742 63150f42d0531f65bf3c8ec4c532deb2 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.5E-6 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_0836 cc9789e2282fb52871becda951412d95 237 Pfam PF00665 Integrase core domain 72 186 4.0E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0836 cc9789e2282fb52871becda951412d95 237 Pfam PF13276 HTH-like domain 5 47 3.7E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0836 cc9789e2282fb52871becda951412d95 237 Gene3D G3DSA:3.30.420.10 66 226 1.6E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0836 cc9789e2282fb52871becda951412d95 237 PANTHER PTHR32552 2 235 1.6E-58 T 21-04-2016 SDY_0836 cc9789e2282fb52871becda951412d95 237 SUPERFAMILY SSF53098 65 229 2.12E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0062 317735c3357520a210e1faddd91ad790 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 500 2.6E-124 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SDY_0062 317735c3357520a210e1faddd91ad790 504 PANTHER PTHR30047:SF4 1 504 0.0 T 21-04-2016 SDY_0062 317735c3357520a210e1faddd91ad790 504 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 62.709 T 21-04-2016 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 UniPathway: UPA00117 SDY_0062 317735c3357520a210e1faddd91ad790 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 501 2.5E-165 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SDY_0062 317735c3357520a210e1faddd91ad790 504 PANTHER PTHR30047 1 504 0.0 T 21-04-2016 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 5.0E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 Pfam PF07729 FCD domain 100 222 3.9E-23 T 21-04-2016 IPR011711 GntR, C-terminal SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PANTHER PTHR11751 94 116 1.6E-50 T 21-04-2016 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PANTHER PTHR11751 1 74 1.6E-50 T 21-04-2016 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PANTHER PTHR11751:SF382 94 116 1.6E-50 T 21-04-2016 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PANTHER PTHR11751:SF382 1 74 1.6E-50 T 21-04-2016 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 SUPERFAMILY SSF46785 6 75 1.8E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 SMART SM00345 12 71 1.7E-25 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 Gene3D G3DSA:1.10.10.10 6 72 8.2E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 SUPERFAMILY SSF48008 96 230 3.92E-27 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 Gene3D G3DSA:1.20.120.530 96 231 2.5E-25 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_4037 f62dbe6c9c0af528b8c3e488ff5867a2 258 SMART SM00895 100 224 2.7E-20 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 SUPERFAMILY SSF55594 4 90 3.66E-24 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-22 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.6E-22 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.3E-8 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.3E-8 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.3E-8 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 PANTHER PTHR33705:SF2 1 90 1.5E-39 T 21-04-2016 SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 Gene3D G3DSA:3.30.1340.10 3 89 1.6E-26 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SDY_3387 f957fc3f45621e04f1c53152aea9a048 90 PANTHER PTHR33705 1 90 1.5E-39 T 21-04-2016 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 PANTHER PTHR32552 40 656 2.8E-26 T 21-04-2016 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 Pfam PF00593 TonB dependent receptor 425 655 1.6E-23 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 SUPERFAMILY SSF56935 38 656 3.51E-85 T 21-04-2016 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 139 1.3E-19 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 Gene3D G3DSA:2.40.170.20 146 656 1.1E-59 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1235 c2c55d551231122eb127b5c62a6c83a0 656 Gene3D G3DSA:2.170.130.10 39 145 1.7E-27 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 PANTHER PTHR11751 12 101 1.6E-48 T 21-04-2016 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 Pfam PF07729 FCD domain 89 208 8.5E-26 T 21-04-2016 IPR011711 GntR, C-terminal SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 SMART SM00345 17 75 2.6E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.02E-5 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.02E-5 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 Gene3D G3DSA:1.20.120.530 79 221 1.1E-25 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 SMART SM00895 85 209 2.4E-17 T 21-04-2016 IPR011711 GntR, C-terminal SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.9E-17 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 Gene3D G3DSA:1.10.10.10 4 76 5.8E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 PANTHER PTHR11751:SF362 12 101 1.6E-48 T 21-04-2016 SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 SUPERFAMILY SSF46785 7 104 7.69E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1585 d17ad9ef6ff4cfff14fe6b0f5a44d047 228 SUPERFAMILY SSF48008 83 216 2.25E-26 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_4261 217669a79244794cef0d2fbc790c93c9 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 373 379 - T 21-04-2016 IPR018303 P-type ATPase, phosphorylation site SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Gene3D G3DSA:1.20.1110.10 98 149 2.8E-69 T 21-04-2016 IPR023298 P-type ATPase, transmembrane domain SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Gene3D G3DSA:1.20.1110.10 608 890 2.8E-69 T 21-04-2016 IPR023298 P-type ATPase, transmembrane domain SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 284 300 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 301 320 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PRINTS PR01836 Magnesium-transporting ATPase signature 405 418 2.4E-85 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SMART SM00831 44 117 1.4E-7 T 21-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SDY_4261 217669a79244794cef0d2fbc790c93c9 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 123 407 1.9E-38 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 728 5.1E-31 T 21-04-2016 IPR001757 P-type ATPase GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Pfam PF00690 Cation transporter/ATPase, N-terminus 48 112 3.0E-15 T 21-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF81665 272 365 3.92E-105 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF81665 46 155 3.92E-105 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF81665 688 896 3.92E-105 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 367 653 2.2E-19 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF56784 532 683 5.76E-38 T 21-04-2016 IPR023214 HAD-like domain SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF81660 340 543 1.92E-41 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Gene3D G3DSA:2.70.150.10 150 271 1.3E-43 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Gene3D G3DSA:2.70.150.10 60 97 1.3E-43 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 SUPERFAMILY SSF81653 168 270 2.88E-29 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Pfam PF00689 Cation transporting ATPase, C-terminus 722 888 3.6E-14 T 21-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SDY_4261 217669a79244794cef0d2fbc790c93c9 898 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 34 898 0.0 T 21-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PANTHER PTHR24093:SF356 45 898 0.0 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Pfam PF00122 E1-E2 ATPase 123 362 1.3E-59 T 21-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 PANTHER PTHR24093 45 898 0.0 T 21-04-2016 SDY_4261 217669a79244794cef0d2fbc790c93c9 898 Gene3D G3DSA:3.40.1110.10 363 546 7.3E-38 T 21-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 Pfam PF02525 Flavodoxin-like fold 3 195 4.8E-47 T 21-04-2016 IPR003680 Flavodoxin-like fold SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 PANTHER PTHR10204 1 201 2.8E-117 T 21-04-2016 SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 Gene3D G3DSA:3.40.50.360 1 199 7.6E-68 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 SUPERFAMILY SSF52218 1 199 3.86E-59 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 PANTHER PTHR10204:SF16 1 201 2.8E-117 T 21-04-2016 SDY_1775 15a31bea385edee59fe0fd42b69a8c38 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.474 T 21-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 21-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Gene3D G3DSA:1.10.579.10 281 469 7.1E-81 T 21-04-2016 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Gene3D G3DSA:1.25.40.80 148 164 3.1E-41 T 21-04-2016 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Gene3D G3DSA:1.25.40.80 200 280 3.1E-41 T 21-04-2016 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 8.5E-85 T 21-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Gene3D G3DSA:3.40.50.620 2 147 2.4E-47 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PRINTS PR00147 DNA photolyase signature 143 159 1.9E-32 T 21-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PRINTS PR00147 DNA photolyase signature 381 395 1.9E-32 T 21-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PRINTS PR00147 DNA photolyase signature 322 338 1.9E-32 T 21-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PRINTS PR00147 DNA photolyase signature 342 360 1.9E-32 T 21-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 21-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 SUPERFAMILY SSF52425 3 198 1.24E-53 T 21-04-2016 IPR006050 DNA photolyase, N-terminal SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 Pfam PF00875 DNA photolyase 5 168 1.7E-46 T 21-04-2016 IPR006050 DNA photolyase, N-terminal SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 SUPERFAMILY SSF48173 194 470 5.89E-107 T 21-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PANTHER PTHR11455:SF18 1 470 2.0E-214 T 21-04-2016 SDY_0643 7a81e3a85d337098b8d5b41636fafbd0 472 PANTHER PTHR11455 1 470 2.0E-214 T 21-04-2016 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 SMART SM00642 63 365 1.1E-29 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 PANTHER PTHR10357:SF144 110 373 1.1E-166 T 21-04-2016 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 PANTHER PTHR10357:SF144 10 75 1.1E-166 T 21-04-2016 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 PANTHER PTHR10357 110 373 1.1E-166 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 PANTHER PTHR10357 10 75 1.1E-166 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 Pfam PF00128 Alpha amylase, catalytic domain 113 374 3.1E-67 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 SUPERFAMILY SSF51445 53 369 2.99E-58 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_0334 f4e8c1924de2128d27ae37dff672d1a9 374 Gene3D G3DSA:3.20.20.80 53 370 7.3E-74 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 PANTHER PTHR12338:SF7 47 486 5.4E-182 T 21-04-2016 SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 Pfam PF03212 Pertactin 36 148 1.1E-10 T 21-04-2016 IPR004899 Pertactin, central region SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 Pfam PF03797 Autotransporter beta-domain 186 470 2.0E-62 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 SUPERFAMILY SSF51126 5 149 3.77E-22 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 Gene3D G3DSA:2.40.128.130 152 486 1.1E-53 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 SMART SM00869 188 473 4.1E-19 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 PANTHER PTHR12338 47 486 5.4E-182 T 21-04-2016 SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 Gene3D G3DSA:2.160.20.20 10 149 9.8E-24 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_4587 c03f4c38cccff078e22daa9625b6ce56 486 SUPERFAMILY SSF103515 159 486 1.83E-27 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_4413 50ba39a5e7587e96d30d0fca5fd4db4b 65 PANTHER PTHR38602 1 64 2.5E-26 T 21-04-2016 SDY_4413 50ba39a5e7587e96d30d0fca5fd4db4b 65 PANTHER PTHR38602:SF1 1 64 2.5E-26 T 21-04-2016 SDY_4413 50ba39a5e7587e96d30d0fca5fd4db4b 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.4E-21 T 21-04-2016 IPR019201 Protein of unknown function DUF2065 SDY_4327 47f7233482bb4bb809e21b827927b749 578 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 570 0.0 T 21-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SDY_4327 47f7233482bb4bb809e21b827927b749 578 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 5.1E-245 T 21-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SDY_4327 47f7233482bb4bb809e21b827927b749 578 PANTHER PTHR39559 1 576 6.5E-251 T 21-04-2016 SDY_4327 47f7233482bb4bb809e21b827927b749 578 PIRSF PIRSF000719 1 575 2.1E-299 T 21-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SDY_4327 47f7233482bb4bb809e21b827927b749 578 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.749 T 21-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PIRSF PIRSF001220 20 348 8.5E-94 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PIRSF PIRSF500176 22 348 1.4E-82 T 21-04-2016 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 2.7E-170 T 21-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 3.0E-23 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.0E-23 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.0E-23 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 21-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 Pfam PF00710 Asparaginase, N-terminal 25 216 2.0E-63 T 21-04-2016 IPR027474 L-asparaginase, N-terminal SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PANTHER PTHR11707:SF29 23 347 7.3E-105 T 21-04-2016 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 Gene3D G3DSA:3.40.50.1170 23 231 3.0E-76 T 21-04-2016 IPR027474 L-asparaginase, N-terminal SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 SUPERFAMILY SSF53774 23 347 1.57E-109 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 Gene3D G3DSA:3.40.50.40 235 346 1.5E-41 T 21-04-2016 IPR027473 L-asparaginase, C-terminal domain SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 21-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 SMART SM00870 25 342 3.2E-147 T 21-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SDY_3115 b464e1a985a7f8c25398303e503e4d19 348 PANTHER PTHR11707 23 347 7.3E-105 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.30.30 53 108 1.7E-28 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:2.60.34.10 390 531 1.0E-70 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100934 507 602 6.54E-31 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 4 183 3.56E-66 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.01E-81 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100920 384 539 1.29E-61 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PANTHER PTHR19375 2 638 0.0 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 319 361 8.5E-34 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 197 229 8.5E-34 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:1.20.1270.10 532 601 1.1E-28 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 PANTHER PTHR19375:SF173 2 638 0.0 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.3E-294 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.90.640.10 230 315 5.3E-32 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Pfam PF00012 Hsp70 protein 4 602 2.6E-270 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 4 52 1.2E-63 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 119 196 1.2E-63 T 21-04-2016 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.27 T 21-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_0013 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 187 382 5.12E-69 T 21-04-2016 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 SUPERFAMILY SSF52794 369 459 1.96E-22 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 PANTHER PTHR30181:SF2 1 462 5.9E-269 T 21-04-2016 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 PANTHER PTHR30181 1 462 5.9E-269 T 21-04-2016 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 Pfam PF02378 Phosphotransferase system, EIIC 20 277 1.6E-22 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 Gene3D G3DSA:3.40.50.10370 369 461 2.0E-32 T 21-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 3.2E-144 T 21-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 SDY_3144 f7cc7d093d19d9e3e3f938217e8ac9e8 462 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 454 3.5E-12 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 Pfam PF13353 4Fe-4S single cluster domain 112 176 1.7E-5 T 21-04-2016 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 PANTHER PTHR30538:SF1 8 339 2.9E-149 T 21-04-2016 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 Gene3D G3DSA:3.20.20.70 104 315 1.8E-18 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 1.0E-156 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 PANTHER PTHR30538 8 339 2.9E-149 T 21-04-2016 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 SUPERFAMILY SSF102114 102 324 1.23E-26 T 21-04-2016 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 Pfam PF04055 Radical SAM superfamily 118 265 5.1E-9 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 PIRSF PIRSF004911 1 342 3.2E-125 T 21-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SDY_4389 e3926a9d973fa4697aa3ed93a4fcc945 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 1.5E-161 T 21-04-2016 IPR022462 Lysine-2,3-aminomutase-like SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 5.6E-109 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 53.515 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 7.4E-156 T 21-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 PIRSF PIRSF026649 9 314 8.2E-105 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 PANTHER PTHR30606 9 323 9.6E-213 T 21-04-2016 SDY_1142 fa05c1f3f6961712e77421fd42fbeddd 323 PANTHER PTHR30606:SF4 9 323 9.6E-213 T 21-04-2016 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Gene3D G3DSA:1.10.8.60 309 385 2.7E-22 T 21-04-2016 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Gene3D G3DSA:3.40.50.2300 3 126 5.6E-37 T 21-04-2016 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 SMART SM00382 156 299 7.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Gene3D G3DSA:3.40.50.300 134 307 4.3E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Gene3D G3DSA:1.10.10.60 390 437 3.5E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Pfam PF00158 Sigma-54 interaction domain 136 302 1.3E-71 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 PANTHER PTHR32071 1 444 1.1E-259 T 21-04-2016 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 SUPERFAMILY SSF52540 136 380 2.1E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 PANTHER PTHR32071:SF5 1 444 1.1E-259 T 21-04-2016 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 SUPERFAMILY SSF46689 387 437 6.57E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 SUPERFAMILY SSF52172 4 180 2.85E-43 T 21-04-2016 IPR011006 CheY-like superfamily SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 SMART SM00448 6 117 3.8E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_2744 2e7d40fdfdaf6ae0642aa95c50e47abc 444 Pfam PF00072 Response regulator receiver domain 9 117 4.7E-30 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4523 2baa029712212a12e240651cbb29557a 327 SMART SM00829 11 325 2.0E-26 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_4523 2baa029712212a12e240651cbb29557a 327 Gene3D G3DSA:3.90.180.10 5 146 4.8E-43 T 21-04-2016 IPR011032 GroES-like SDY_4523 2baa029712212a12e240651cbb29557a 327 SUPERFAMILY SSF51735 113 275 1.87E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4523 2baa029712212a12e240651cbb29557a 327 PANTHER PTHR11695:SF605 16 327 2.4E-131 T 21-04-2016 SDY_4523 2baa029712212a12e240651cbb29557a 327 PANTHER PTHR11695 16 327 2.4E-131 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_4523 2baa029712212a12e240651cbb29557a 327 SUPERFAMILY SSF50129 5 144 7.39E-33 T 21-04-2016 IPR011032 GroES-like SDY_4523 2baa029712212a12e240651cbb29557a 327 Gene3D G3DSA:3.40.50.720 147 256 1.1E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4523 2baa029712212a12e240651cbb29557a 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 3.8E-29 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_4523 2baa029712212a12e240651cbb29557a 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 21-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 SDY_4523 2baa029712212a12e240651cbb29557a 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.9E-9 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 Pfam PF01327 Polypeptide deformylase 4 152 1.5E-50 T 21-04-2016 IPR023635 Peptide deformylase SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PANTHER PTHR10458:SF10 1 168 3.3E-111 T 21-04-2016 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 Gene3D G3DSA:3.90.45.10 5 165 1.7E-63 T 21-04-2016 IPR023635 Peptide deformylase SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.054 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-38 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 SUPERFAMILY SSF56420 3 164 1.02E-61 T 21-04-2016 IPR023635 Peptide deformylase SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.9E-66 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PIRSF PIRSF004749 1 168 3.4E-55 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_3463 6edaccfd0cf997a74924ac8da9f6b01f 169 PANTHER PTHR10458 1 168 3.3E-111 T 21-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 PANTHER PTHR11807:SF2 13 429 1.2E-108 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 SUPERFAMILY SSF52402 4 226 7.5E-66 T 21-04-2016 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 Pfam PF09179 TilS substrate binding domain 241 308 1.4E-19 T 21-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 196 1.5E-52 T 21-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 SUPERFAMILY SSF82829 227 312 9.68E-27 T 21-04-2016 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 SUPERFAMILY SSF56037 318 427 2.88E-31 T 21-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 Gene3D G3DSA:3.40.50.620 8 173 1.0E-11 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 300 23.771 T 21-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 SMART SM00977 356 427 7.7E-25 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 401 1.6E-15 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 PANTHER PTHR11807 13 429 1.2E-108 T 21-04-2016 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 Pfam PF11734 TilS substrate C-terminal domain 356 427 1.0E-25 T 21-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SDY_0206 6ddccfc50cfec4f36d4e7f1c422c5627 431 Pfam PF01171 PP-loop family 14 191 7.5E-61 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SDY_1682 bf574960d06a881453b1aa0debd7d231 126 Gene3D G3DSA:1.20.1250.20 13 122 1.3E-14 T 21-04-2016 SDY_1682 bf574960d06a881453b1aa0debd7d231 126 Pfam PF07690 Major Facilitator Superfamily 15 122 9.0E-10 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1682 bf574960d06a881453b1aa0debd7d231 126 ProSitePatterns PS00216 Sugar transport proteins signature 1. 38 54 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_1682 bf574960d06a881453b1aa0debd7d231 126 SUPERFAMILY SSF103473 6 122 5.1E-15 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1682 bf574960d06a881453b1aa0debd7d231 126 PANTHER PTHR23514 1 121 4.7E-72 T 21-04-2016 SDY_1682 bf574960d06a881453b1aa0debd7d231 126 PANTHER PTHR23514:SF1 1 121 4.7E-72 T 21-04-2016 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Pfam PF02607 B12 binding domain 660 733 3.2E-25 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 PANTHER PTHR21091 12 398 2.3E-164 T 21-04-2016 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SUPERFAMILY SSF47644 653 739 6.02E-29 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Pfam PF02574 Homocysteine S-methyltransferase 17 325 2.2E-89 T 21-04-2016 IPR003726 Homocysteine-binding domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 PANTHER PTHR21091:SF97 12 398 2.3E-164 T 21-04-2016 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Gene3D G3DSA:3.20.20.330 3 363 4.2E-126 T 21-04-2016 IPR003726 Homocysteine-binding domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Gene3D G3DSA:3.10.196.10 957 1226 3.5E-116 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 7.4E-128 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SUPERFAMILY SSF82282 7 399 2.09E-116 T 21-04-2016 IPR003726 Homocysteine-binding domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 21-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Pfam PF00809 Pterin binding enzyme 360 598 1.1E-62 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Gene3D G3DSA:3.40.50.280 745 894 2.6E-65 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Pfam PF02310 B12 binding domain 748 840 2.9E-18 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Gene3D G3DSA:1.10.1240.10 650 737 3.0E-40 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SUPERFAMILY SSF51717 356 630 7.46E-89 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 Gene3D G3DSA:3.20.20.20 364 636 1.4E-114 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SUPERFAMILY SSF52242 743 894 7.06E-48 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SUPERFAMILY SSF56507 902 1225 2.49E-135 T 21-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 SMART SM01018 657 740 5.0E-45 T 21-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SDY_4322 fa7944881917e9544d5162fcb4fc264f 1232 PIRSF PIRSF000381 1 1195 0.0 T 21-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 222 287 1.0E-16 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 Gene3D G3DSA:3.40.50.300 3 255 4.8E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 220 305 4.2E-19 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 PANTHER PTHR24220 7 307 3.3E-121 T 21-04-2016 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 Pfam PF00005 ABC transporter 33 171 3.4E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 SUPERFAMILY SSF52540 6 241 2.44E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 SMART SM00382 41 220 1.7E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1611 c6a09c5cf859501cd2b78f4268c3f34c 308 PANTHER PTHR24220:SF336 7 307 3.3E-121 T 21-04-2016 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 SMART SM00388 270 338 3.5E-18 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PANTHER PTHR24423:SF473 210 490 3.7E-225 T 21-04-2016 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PANTHER PTHR24423:SF473 11 32 3.7E-225 T 21-04-2016 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 337 2.1E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PANTHER PTHR24423 210 490 3.7E-225 T 21-04-2016 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PANTHER PTHR24423 11 32 3.7E-225 T 21-04-2016 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 491 8.0E-16 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 4.5E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 4.5E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 4.5E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 4.5E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 SUPERFAMILY SSF55874 342 490 1.7E-31 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 Gene3D G3DSA:3.30.565.10 340 493 8.7E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 Gene3D G3DSA:1.10.287.130 262 334 5.2E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 SUPERFAMILY SSF47384 257 337 9.42E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 Pfam PF00672 HAMP domain 197 264 7.2E-8 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_2746 56731c982cc20d735ba35f36b8c76f40 496 SMART SM00387 381 493 1.9E-26 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 329 1.3E-89 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 SUPERFAMILY SSF47413 1 56 6.88E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 PANTHER PTHR30146:SF36 1 330 4.9E-146 T 21-04-2016 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.3E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-5 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 PANTHER PTHR30146 1 330 4.9E-146 T 21-04-2016 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 Gene3D G3DSA:3.40.50.2300 169 331 1.5E-33 T 21-04-2016 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 Gene3D G3DSA:1.10.260.40 1 50 2.1E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 SUPERFAMILY SSF53822 65 331 1.45E-38 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 Gene3D G3DSA:3.40.50.2300 51 168 9.8E-19 T 21-04-2016 SDY_2559 5cfac866a0cc1984e728ebee9101831a 331 SMART SM00354 1 73 3.7E-28 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 3.0E-102 T 21-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PANTHER PTHR24322:SF635 151 183 1.4E-80 T 21-04-2016 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PANTHER PTHR24322:SF635 10 135 1.4E-80 T 21-04-2016 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 SUPERFAMILY SSF51735 4 243 4.0E-87 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.1E-67 T 21-04-2016 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PANTHER PTHR24322 151 183 1.4E-80 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PANTHER PTHR24322 10 135 1.4E-80 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 7.8E-6 T 21-04-2016 SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.18E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.18E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.18E-15 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 Gene3D G3DSA:3.40.50.720 2 243 4.0E-89 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.08E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2057 ef3aab3e8ec6270bd49286e9962e35ac 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_3557 9e018c5a76108fdebc9ccc8ee4b127f3 199 PIRSF PIRSF004982 12 195 9.2E-56 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_3557 9e018c5a76108fdebc9ccc8ee4b127f3 199 Pfam PF03843 Outer membrane lipoprotein Slp family 27 176 1.9E-43 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_3557 9e018c5a76108fdebc9ccc8ee4b127f3 199 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 13 194 9.7E-90 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_3557 9e018c5a76108fdebc9ccc8ee4b127f3 199 PANTHER PTHR37530 8 195 1.2E-70 T 21-04-2016 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.453 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PANTHER PTHR12128:SF34 1 292 1.6E-148 T 21-04-2016 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 SUPERFAMILY SSF51569 1 292 1.05E-99 T 21-04-2016 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PIRSF PIRSF001365 1 292 6.5E-98 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PANTHER PTHR12128 1 292 1.6E-148 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.9E-35 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.9E-35 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.9E-35 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.9E-35 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 7.7E-126 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 21-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 Gene3D G3DSA:3.20.20.70 1 292 1.3E-117 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 21-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 SMART SM01130 1 290 8.1E-141 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_2667 d27183a754786b8557e4cc1ab11fcb38 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.1E-127 T 21-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 Gene3D G3DSA:2.60.120.590 15 214 1.5E-62 T 21-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 PANTHER PTHR16557 31 216 1.9E-65 T 21-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 PANTHER PTHR16557 3 15 1.9E-65 T 21-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 19 210 4.2E-56 T 21-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 TIGRFAM TIGR00568 alkb: alkylated DNA repair protein AlkB 22 189 1.7E-76 T 21-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 SDY_0864 b406dce3b8d8f1947019bd9572e8d8ab 216 SUPERFAMILY SSF51197 15 212 2.2E-63 T 21-04-2016 SDY_1416a b9e2af2f7bbf3177e751533d47755e53 90 PANTHER PTHR33293 1 89 4.6E-20 T 21-04-2016 SDY_1416a b9e2af2f7bbf3177e751533d47755e53 90 PANTHER PTHR33293:SF2 1 89 4.6E-20 T 21-04-2016 SDY_1416a b9e2af2f7bbf3177e751533d47755e53 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1416a b9e2af2f7bbf3177e751533d47755e53 90 Pfam PF12759 InsA C-terminal domain 42 87 3.4E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0965a b9e2af2f7bbf3177e751533d47755e53 90 PANTHER PTHR33293 1 89 4.6E-20 T 21-04-2016 SDY_0965a b9e2af2f7bbf3177e751533d47755e53 90 PANTHER PTHR33293:SF2 1 89 4.6E-20 T 21-04-2016 SDY_0965a b9e2af2f7bbf3177e751533d47755e53 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0965a b9e2af2f7bbf3177e751533d47755e53 90 Pfam PF12759 InsA C-terminal domain 42 87 3.4E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 SUPERFAMILY SSF52540 4 234 4.9E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 PANTHER PTHR24220:SF568 7 236 1.4E-137 T 21-04-2016 SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 PANTHER PTHR24220 7 236 1.4E-137 T 21-04-2016 SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 Pfam PF00005 ABC transporter 21 165 2.5E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 PIRSF PIRSF039137 1 237 1.3E-102 T 21-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 Gene3D G3DSA:3.40.50.300 2 232 2.2E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3603 fb37fe39bdd34bc9d892078cacdbd107 237 SMART SM00382 30 216 7.4E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4460 3b4d9c77a73323aa23ce22e2ea80c06a 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 51 3.0E-7 T 21-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SDY_4460 3b4d9c77a73323aa23ce22e2ea80c06a 85 Gene3D G3DSA:2.10.260.10 2 85 9.9E-25 T 21-04-2016 SDY_4460 3b4d9c77a73323aa23ce22e2ea80c06a 85 PANTHER PTHR40516 4 85 9.0E-27 T 21-04-2016 SDY_4460 3b4d9c77a73323aa23ce22e2ea80c06a 85 SUPERFAMILY SSF89447 3 66 6.1E-14 T 21-04-2016 SDY_4460 3b4d9c77a73323aa23ce22e2ea80c06a 85 SMART SM00966 8 53 2.9E-5 T 21-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SDY_2942 74dc26128b76215968daf2543c090ded 208 Gene3D G3DSA:3.40.50.150 12 205 8.3E-64 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2942 74dc26128b76215968daf2543c090ded 208 SUPERFAMILY SSF53335 12 204 2.59E-46 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2942 74dc26128b76215968daf2543c090ded 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SDY_2942 74dc26128b76215968daf2543c090ded 208 PANTHER PTHR11579 7 203 3.0E-92 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SDY_2942 74dc26128b76215968daf2543c090ded 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 3.0E-82 T 21-04-2016 SDY_2942 74dc26128b76215968daf2543c090ded 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 8.5E-100 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SDY_2942 74dc26128b76215968daf2543c090ded 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.213 T 21-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 Pfam PF13500 AAA domain 3 208 1.4E-39 T 21-04-2016 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 PANTHER PTHR21343 2 223 3.5E-124 T 21-04-2016 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 216 30.392 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 PIRSF PIRSF006755 1 225 9.1E-89 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 Gene3D G3DSA:3.40.50.300 3 214 3.1E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 PANTHER PTHR21343:SF13 2 223 3.5E-124 T 21-04-2016 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 5.1E-67 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_0828 ecbb8195b87df4ad69f8340e1c0820ac 225 SUPERFAMILY SSF52540 3 211 6.57E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 PANTHER PTHR30293 4 298 1.3E-226 T 21-04-2016 SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 SUPERFAMILY SSF46785 1 87 4.46E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 Pfam PF03466 LysR substrate binding domain 99 286 3.6E-10 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.2E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 Gene3D G3DSA:1.10.10.10 5 85 3.6E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 PANTHER PTHR30293:SF2 4 298 1.3E-226 T 21-04-2016 SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 Gene3D G3DSA:3.40.190.10 99 229 2.0E-6 T 21-04-2016 SDY_0019 18b81b41aef5f364b6d48565df28ad24 301 SUPERFAMILY SSF53850 92 289 6.79E-26 T 21-04-2016 SDY_2132 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_2132 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_2132 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3199 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_3199 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_3199 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1057 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_1057 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_1057 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1414 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_1414 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_1414 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1761 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_1761 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_1761 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0362 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_0362 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_0362 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3946 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_3946 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_3946 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4621 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_4621 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_4621 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2652 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_2652 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_2652 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3531 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_3531 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_3531 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2400 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293 6 126 1.0E-23 T 21-04-2016 SDY_2400 96f9cfaa751a7cedf426aeb2419c5bf0 131 PANTHER PTHR33293:SF1 6 126 1.0E-23 T 21-04-2016 SDY_2400 96f9cfaa751a7cedf426aeb2419c5bf0 131 Pfam PF03400 IS1 transposase 2 131 5.8E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 PANTHER PTHR30462 2 875 0.0 T 21-04-2016 SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 749 812 3.0E-8 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 48 139 1.5E-15 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 282 353 8.5E-8 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 165 222 8.3E-6 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 638 726 5.5E-10 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 Pfam PF02470 MlaD protein 396 457 8.9E-6 T 21-04-2016 IPR003399 Mce/MlaD SDY_1985 986c6295bf5942e14f2d7c69ba12837e 875 PANTHER PTHR30462:SF0 2 875 0.0 T 21-04-2016 SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 Gene3D G3DSA:3.90.550.10 24 295 1.4E-62 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 SUPERFAMILY SSF53448 25 296 1.69E-57 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 PANTHER PTHR13778:SF10 19 312 1.9E-39 T 21-04-2016 SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 Pfam PF01501 Glycosyl transferase family 8 25 276 2.4E-64 T 21-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 3.1E-19 T 21-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 SDY_4056 9c97b1530ba5d0462899672ae023e5dd 342 PANTHER PTHR13778 19 312 1.9E-39 T 21-04-2016 SDY_1132 7985d314e5cd849001902373d6b67211 219 SUPERFAMILY SSF158682 88 212 1.96E-18 T 21-04-2016 IPR029024 TerB-like SDY_1132 7985d314e5cd849001902373d6b67211 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 5.6E-50 T 21-04-2016 IPR007486 Inner membrane protein YebE SDY_1132 7985d314e5cd849001902373d6b67211 219 Gene3D G3DSA:1.10.3680.10 66 212 2.1E-14 T 21-04-2016 IPR029024 TerB-like SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 7.4E-15 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Pfam PF01966 HD domain 229 328 3.1E-12 T 21-04-2016 IPR006674 HD domain SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 SUPERFAMILY SSF81891 120 402 7.59E-54 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 SUPERFAMILY SSF81301 2 119 2.51E-32 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.491 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Gene3D G3DSA:3.30.460.10 2 121 1.7E-31 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Gene3D G3DSA:1.10.3090.10 122 359 2.8E-56 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.784 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 PANTHER PTHR13734 386 401 1.1E-75 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 PANTHER PTHR13734 1 301 1.1E-75 T 21-04-2016 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.4E-18 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SDY_3239 dc1453d8f757c3a835dc38c18dc13765 412 PIRSF PIRSF000813 1 408 1.7E-207 T 21-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.1E-13 T 21-04-2016 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 PANTHER PTHR30154:SF2 1 152 6.3E-65 T 21-04-2016 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 SMART SM00344 6 113 7.8E-45 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF54909 68 152 2.28E-19 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF46785 4 66 1.06E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 21-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-14 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.7E-14 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-14 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 6.5E-18 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:1.10.10.10 1 57 4.8E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 PANTHER PTHR30154 1 152 6.3E-65 T 21-04-2016 SDY_4005 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:3.30.70.920 70 143 9.9E-23 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_4007 207108a253bcc96220dbddab0dcc9557 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.108 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 21-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 21-04-2016 IPR020595 MnmG-related, conserved site SDY_4007 207108a253bcc96220dbddab0dcc9557 629 Pfam PF13932 GidA associated domain 403 616 2.7E-73 T 21-04-2016 IPR026904 GidA associated domain 3 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 PANTHER PTHR11806:SF0 1 629 0.0 T 21-04-2016 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 PANTHER PTHR11806 1 629 0.0 T 21-04-2016 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 Pfam PF01134 Glucose inhibited division protein A 8 398 2.8E-170 T 21-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 21-04-2016 IPR020595 MnmG-related, conserved site SDY_4007 207108a253bcc96220dbddab0dcc9557 629 SMART SM01228 546 617 9.2E-45 T 21-04-2016 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 SUPERFAMILY SSF51905 97 261 2.07E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 SUPERFAMILY SSF51905 7 66 2.07E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4007 207108a253bcc96220dbddab0dcc9557 629 Gene3D G3DSA:3.50.50.60 7 233 3.1E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 9.1E-155 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PANTHER PTHR32195 1 410 7.7E-213 T 21-04-2016 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.3E-161 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PANTHER PTHR32195:SF18 1 410 7.7E-213 T 21-04-2016 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 21-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_3340 a348e5409d1f080e3e0212c74f681cd0 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.8E-105 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 PANTHER PTHR30570 1 340 5.1E-135 T 21-04-2016 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 Gene3D G3DSA:3.40.190.10 27 177 4.2E-56 T 21-04-2016 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 Gene3D G3DSA:3.40.190.10 181 338 6.2E-35 T 21-04-2016 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 PIRSF PIRSF002756 1 338 6.1E-104 T 21-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 Pfam PF12849 PBP superfamily domain 27 307 2.3E-61 T 21-04-2016 IPR024370 PBP domain SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 SUPERFAMILY SSF53850 27 339 1.47E-96 T 21-04-2016 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 PANTHER PTHR30570:SF0 1 340 5.1E-135 T 21-04-2016 SDY_4022 667bb6b3c2c73941380ebe38620f5a20 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.0E-124 T 21-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SDY_1270 d858f8b32a148bfc048078fe26aec4f1 218 Pfam PF04752 ChaC-like protein 54 217 1.2E-54 T 21-04-2016 IPR006840 ChaC-like protein SDY_1270 d858f8b32a148bfc048078fe26aec4f1 218 PANTHER PTHR12192 8 218 1.7E-131 T 21-04-2016 IPR006840 ChaC-like protein SDY_1270 d858f8b32a148bfc048078fe26aec4f1 218 SUPERFAMILY SSF110857 54 168 2.22E-10 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SDY_1270 d858f8b32a148bfc048078fe26aec4f1 218 Gene3D G3DSA:3.10.490.10 48 216 6.4E-47 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SDY_1270 d858f8b32a148bfc048078fe26aec4f1 218 PANTHER PTHR12192:SF9 8 218 1.7E-131 T 21-04-2016 SDY_3142 bd98d227ef737d7a4fc222d0f0b5ec15 131 PANTHER PTHR33293 6 126 1.1E-24 T 21-04-2016 SDY_3142 bd98d227ef737d7a4fc222d0f0b5ec15 131 Pfam PF03400 IS1 transposase 2 131 2.0E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3142 bd98d227ef737d7a4fc222d0f0b5ec15 131 PANTHER PTHR33293:SF1 6 126 1.1E-24 T 21-04-2016 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 SUPERFAMILY SSF103481 42 132 2.35E-11 T 21-04-2016 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 Pfam PF00892 EamA-like transporter family 7 130 7.2E-14 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 Pfam PF00892 EamA-like transporter family 143 286 6.5E-15 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 PANTHER PTHR32322:SF9 3 298 1.6E-116 T 21-04-2016 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 PANTHER PTHR32322 3 298 1.6E-116 T 21-04-2016 SDY_1594 cf73918b3d3f0a04a7b3aa8f6ce2f98d 299 SUPERFAMILY SSF103481 209 287 2.75E-10 T 21-04-2016 SDY_3095 28436014d84845cce9353f0e0746df60 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 21-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SDY_3095 28436014d84845cce9353f0e0746df60 399 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 399 6.0E-142 T 21-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 SDY_3095 28436014d84845cce9353f0e0746df60 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 399 5.6E-35 T 21-04-2016 IPR003004 GspF/PilC family SDY_3095 28436014d84845cce9353f0e0746df60 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 5.6E-35 T 21-04-2016 IPR003004 GspF/PilC family SDY_3095 28436014d84845cce9353f0e0746df60 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 5.6E-35 T 21-04-2016 IPR003004 GspF/PilC family SDY_3095 28436014d84845cce9353f0e0746df60 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 5.6E-35 T 21-04-2016 IPR003004 GspF/PilC family SDY_3095 28436014d84845cce9353f0e0746df60 399 PANTHER PTHR30012 2 399 5.1E-193 T 21-04-2016 SDY_3095 28436014d84845cce9353f0e0746df60 399 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.0E-23 T 21-04-2016 IPR018076 Type II secretion system F domain SDY_3095 28436014d84845cce9353f0e0746df60 399 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 7.1E-30 T 21-04-2016 IPR018076 Type II secretion system F domain SDY_3095 28436014d84845cce9353f0e0746df60 399 PANTHER PTHR30012:SF6 2 399 5.1E-193 T 21-04-2016 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 Gene3D G3DSA:1.10.3430.10 26 407 1.1E-138 T 21-04-2016 IPR029020 Ammonium/urea transporter SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 PANTHER PTHR11730:SF17 3 427 1.2E-189 T 21-04-2016 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 4.5E-137 T 21-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 SUPERFAMILY SSF111352 27 407 2.48E-127 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 21-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 Pfam PF00909 Ammonium Transporter Family 33 426 1.4E-129 T 21-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SDY_0388 4f55c3d57fec47266b3cee69f5824e8f 428 PANTHER PTHR11730 3 427 1.2E-189 T 21-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SDY_0685 8d53964583b70def164722bb86ff4a5b 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 2.0E-93 T 21-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 SDY_0685 8d53964583b70def164722bb86ff4a5b 230 PANTHER PTHR30625 3 228 2.0E-78 T 21-04-2016 SDY_0685 8d53964583b70def164722bb86ff4a5b 230 PANTHER PTHR30625:SF3 3 228 2.0E-78 T 21-04-2016 SDY_0685 8d53964583b70def164722bb86ff4a5b 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 6.7E-42 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SDY_2545 a5e17ba22f15433f8e1b2922231f38e5 448 SUPERFAMILY SSF56935 28 448 2.2E-114 T 21-04-2016 SDY_2545 a5e17ba22f15433f8e1b2922231f38e5 448 PANTHER PTHR35093 5 448 0.0 T 21-04-2016 SDY_2545 a5e17ba22f15433f8e1b2922231f38e5 448 PANTHER PTHR35093:SF3 5 448 0.0 T 21-04-2016 SDY_2545 a5e17ba22f15433f8e1b2922231f38e5 448 Gene3D G3DSA:2.40.160.60 28 448 9.6E-141 T 21-04-2016 SDY_2545 a5e17ba22f15433f8e1b2922231f38e5 448 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 448 4.5E-155 T 21-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 PANTHER PTHR24220 329 439 1.5E-246 T 21-04-2016 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 PANTHER PTHR24220 3 301 1.5E-246 T 21-04-2016 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 PANTHER PTHR24220:SF442 3 301 1.5E-246 T 21-04-2016 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 PANTHER PTHR24220:SF442 329 439 1.5E-246 T 21-04-2016 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 532 564 4.3E-8 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 269 6.4E-8 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Gene3D G3DSA:3.40.50.300 2 259 2.7E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 SUPERFAMILY SSF52540 303 552 1.33E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Pfam PF00005 ABC transporter 330 480 2.7E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Pfam PF00005 ABC transporter 22 185 1.8E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 Gene3D G3DSA:3.40.50.300 301 554 8.3E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 SMART SM00382 30 235 4.5E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 SMART SM00382 338 538 2.3E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0758 cb5f2a2c7d48f343530553e16346c9ff 612 SUPERFAMILY SSF52540 1 257 2.15E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3370 2e674b40ffadf7201b81483e66b05254 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.2E-183 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 Gene3D G3DSA:3.65.10.10 220 416 8.2E-64 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 PANTHER PTHR21090 1 419 6.9E-225 T 21-04-2016 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.525 T 21-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 2.6E-130 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 Gene3D G3DSA:3.65.10.10 21 219 6.2E-67 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_3370 2e674b40ffadf7201b81483e66b05254 419 SUPERFAMILY SSF55205 1 418 6.21E-146 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Gene3D G3DSA:3.40.50.720 457 628 1.8E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 8.3E-27 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 PIRSF PIRSF000727 12 810 5.6E-302 T 21-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 SUPERFAMILY SSF51735 457 630 3.55E-34 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 SUPERFAMILY SSF53633 12 299 5.24E-56 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Gene3D G3DSA:3.30.360.10 629 786 4.1E-52 T 21-04-2016 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 3.4E-63 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 SUPERFAMILY SSF55347 608 791 3.14E-47 T 21-04-2016 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 PANTHER PTHR21499 386 810 3.6E-249 T 21-04-2016 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 21-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Pfam PF00742 Homoserine dehydrogenase 608 803 2.7E-44 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Pfam PF00696 Amino acid kinase family 12 284 1.7E-43 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Gene3D G3DSA:3.40.1160.10 114 298 3.2E-47 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 Gene3D G3DSA:3.40.1160.10 12 59 3.2E-47 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3775 205fd0b80c7419e2ef2edc1f59a90177 810 PANTHER PTHR21499:SF29 386 810 3.6E-249 T 21-04-2016 SDY_4346 a6b3a8b6552b15a25ce87d30d37622ce 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.7E-13 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_4346 a6b3a8b6552b15a25ce87d30d37622ce 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.7E-13 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_4346 a6b3a8b6552b15a25ce87d30d37622ce 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 21-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 SDY_4346 a6b3a8b6552b15a25ce87d30d37622ce 50 Pfam PF01848 Hok/gef family 5 46 4.2E-23 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_4346 a6b3a8b6552b15a25ce87d30d37622ce 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 46 1.0E-20 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 SUPERFAMILY SSF75217 75 242 4.6E-51 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 PANTHER PTHR30027:SF3 1 243 3.8E-106 T 21-04-2016 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 Gene3D G3DSA:3.40.1280.10 75 242 1.7E-58 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.3E-94 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 PIRSF PIRSF015601 2 242 1.8E-51 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 Pfam PF04452 RNA methyltransferase 20 236 1.9E-73 T 21-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 SUPERFAMILY SSF88697 2 70 4.22E-18 T 21-04-2016 IPR015947 PUA-like domain SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 PANTHER PTHR30027 1 243 3.8E-106 T 21-04-2016 SDY_3126 5a3988b9f9b719dc55bf6072d8f4c9c4 243 Gene3D G3DSA:2.40.240.20 1 71 2.1E-30 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PANTHER PTHR30222:SF10 1 345 1.4E-190 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 Pfam PF13343 Bacterial extracellular solute-binding protein 77 322 6.5E-39 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 Gene3D G3DSA:3.40.190.10 26 132 3.7E-65 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 Gene3D G3DSA:3.40.190.10 270 313 3.7E-65 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 3.1E-97 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PIRSF PIRSF019574 1 348 3.5E-135 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 PANTHER PTHR30222 1 345 1.4E-190 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 SUPERFAMILY SSF53850 27 345 6.34E-98 T 21-04-2016 SDY_2029 c3f307642155ebe32b4c91383e8cadac 348 Gene3D G3DSA:3.40.190.10 134 269 7.4E-26 T 21-04-2016 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 PIRSF PIRSF006205 1 398 8.0E-160 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 2.1E-198 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 4.3E-40 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 SUPERFAMILY SSF51735 2 150 1.27E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 SUPERFAMILY SSF69055 301 393 1.24E-28 T 21-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 PANTHER PTHR30525 1 391 5.7E-235 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.298 T 21-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.4E-50 T 21-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 SUPERFAMILY SSF55347 126 274 1.11E-62 T 21-04-2016 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Gene3D G3DSA:3.40.50.720 1 150 2.6E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.8E-36 T 21-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_0189 f4df5c8e5df4e94539ad00ab33dfcad4 398 Gene3D G3DSA:1.10.1740.10 313 395 7.6E-30 T 21-04-2016 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 SUPERFAMILY SSF50249 3 68 5.9E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.4E-33 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 PIRSF PIRSF002599 1 69 2.5E-26 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 PANTHER PTHR11544 1 69 2.9E-43 T 21-04-2016 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 Gene3D G3DSA:2.40.50.140 4 67 1.6E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 21-04-2016 IPR019844 Cold-shock conserved site SDY_0546 a681313ba1313404e2556ff70a8ea5db 69 SMART SM00357 5 69 3.2E-33 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Gene3D G3DSA:3.40.50.620 183 385 1.7E-92 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Gene3D G3DSA:3.40.50.620 6 144 1.7E-92 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Pfam PF01588 Putative tRNA binding domain 581 674 4.9E-22 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Gene3D G3DSA:2.40.50.140 568 677 9.8E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PANTHER PTHR11946:SF86 6 632 1.5E-257 T 21-04-2016 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 2.0E-164 T 21-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.5E-48 T 21-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Gene3D G3DSA:2.20.28.20 145 176 1.5E-19 T 21-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 SUPERFAMILY SSF52374 176 388 1.54E-105 T 21-04-2016 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 SUPERFAMILY SSF52374 6 141 1.54E-105 T 21-04-2016 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 SUPERFAMILY SSF47323 391 548 2.24E-47 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 21-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 3.6E-209 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 SUPERFAMILY SSF50249 570 676 1.64E-28 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Gene3D G3DSA:1.10.730.10 391 526 2.0E-42 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PANTHER PTHR11946 6 632 1.5E-257 T 21-04-2016 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.8E-26 T 21-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SDY_2181 ec5cffd692046ca0d43c1c7e13047109 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.776 T 21-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SMART SM00382 226 363 3.7E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 PANTHER PTHR32071 1 513 6.3E-212 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SMART SM00091 80 147 2.1E-4 T 21-04-2016 IPR000014 PAS domain SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Gene3D G3DSA:1.10.10.60 450 507 2.2E-28 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Pfam PF00158 Sigma-54 interaction domain 207 365 8.4E-56 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SUPERFAMILY SSF55021 2 69 3.51E-5 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Gene3D G3DSA:3.30.70.260 2 68 2.3E-5 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SUPERFAMILY SSF52540 206 440 2.6E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SUPERFAMILY SSF46689 454 507 4.93E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Gene3D G3DSA:3.30.450.20 78 183 2.4E-14 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Gene3D G3DSA:3.40.50.300 203 371 8.0E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 SUPERFAMILY SSF55785 82 174 1.47E-8 T 21-04-2016 IPR000014 PAS domain SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 PANTHER PTHR32071:SF3 1 513 6.3E-212 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Pfam PF13188 PAS domain 82 135 6.8E-5 T 21-04-2016 IPR000014 PAS domain SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 Gene3D G3DSA:1.10.8.60 372 442 7.0E-19 T 21-04-2016 SDY_1401 ffdd191dec151391c3a1f8fc669fa994 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.3E-28 T 21-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 SDY_3285 fa1a4201301f9503dd5d51aa06fb8a10 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.8E-31 T 21-04-2016 IPR010279 Protein of unknown function DUF883, ElaB SDY_3285 fa1a4201301f9503dd5d51aa06fb8a10 101 PANTHER PTHR35893:SF2 1 101 2.9E-74 T 21-04-2016 SDY_3285 fa1a4201301f9503dd5d51aa06fb8a10 101 PANTHER PTHR35893 1 101 2.9E-74 T 21-04-2016 SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 2.0E-77 T 21-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 PANTHER PTHR30333:SF1 2 200 5.1E-118 T 21-04-2016 SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 Gene3D G3DSA:1.10.3820.10 21 193 5.3E-28 T 21-04-2016 SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 5.7E-106 T 21-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 SUPERFAMILY SSF48695 17 196 9.41E-65 T 21-04-2016 IPR011031 Multihaem cytochrome SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 PIRSF PIRSF000013 1 200 1.0E-107 T 21-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SDY_0876 09ef5a40e257d60a0a7ad4ab26c7f130 200 PANTHER PTHR30333 2 200 5.1E-118 T 21-04-2016 SDY_4585 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4585 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4585 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4585 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_1078 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1078 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1078 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1078 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0495 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0495 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0495 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0495 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2979 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2979 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2979 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2979 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2168 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2168 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2168 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2168 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_1162 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1162 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1162 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1162 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3699 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3699 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3699 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3699 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_1019 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF00665 Integrase core domain 124 243 3.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1019 9413f5e904ad401e5ff2cd29d54f2929 301 Gene3D G3DSA:3.30.420.10 119 282 9.7E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1019 9413f5e904ad401e5ff2cd29d54f2929 301 SUPERFAMILY SSF53098 125 291 8.35E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1019 9413f5e904ad401e5ff2cd29d54f2929 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Gene3D G3DSA:3.40.1190.10 82 310 1.0E-76 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Gene3D G3DSA:3.90.190.20 313 448 3.8E-45 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Pfam PF01225 Mur ligase family, catalytic domain 26 80 3.0E-9 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Pfam PF08245 Mur ligase middle domain 106 292 4.5E-52 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 PANTHER PTHR23135 12 448 4.0E-173 T 21-04-2016 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 394 1.2E-14 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.693 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 PANTHER PTHR23135:SF3 12 448 4.0E-173 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 Gene3D G3DSA:3.40.1390.10 1 80 1.8E-26 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 SUPERFAMILY SSF63418 1 97 1.31E-28 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 SUPERFAMILY SSF53623 100 310 4.45E-60 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 9.3E-143 T 21-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0116 7ac3f2a9d3c3a2edb603b3fd92f7ec0a 452 SUPERFAMILY SSF53244 313 446 8.24E-38 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 Pfam PF01300 Telomere recombination 16 189 9.9E-41 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.719 T 21-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 Gene3D G3DSA:3.90.870.10 3 190 6.3E-54 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 SUPERFAMILY SSF55821 4 187 6.1E-55 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 PANTHER PTHR17490:SF8 4 185 8.9E-116 T 21-04-2016 SDY_3459 155973e004a4cfa2d014bd0181c356f0 190 PANTHER PTHR17490 4 185 8.9E-116 T 21-04-2016 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PANTHER PTHR18901:SF7 11 237 4.0E-139 T 21-04-2016 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 SUPERFAMILY SSF56784 21 232 2.34E-47 T 21-04-2016 IPR023214 HAD-like domain SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 28 206 1.6E-19 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 120 133 1.8E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 25 36 1.8E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 1.8E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 1.8E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 Gene3D G3DSA:3.40.50.1000 25 210 1.4E-28 T 21-04-2016 IPR023214 HAD-like domain SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 205 1.6E-10 T 21-04-2016 IPR023214 HAD-like domain SDY_3679 ea1935057ecd2859f6da1701e49ff0d3 237 PANTHER PTHR18901 11 237 4.0E-139 T 21-04-2016 SDY_0912a 924562008583d873713c700fe5412449 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0912a 924562008583d873713c700fe5412449 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_0912a 924562008583d873713c700fe5412449 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_0912a 924562008583d873713c700fe5412449 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4777 924562008583d873713c700fe5412449 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4777 924562008583d873713c700fe5412449 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_4777 924562008583d873713c700fe5412449 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_4777 924562008583d873713c700fe5412449 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0913a 924562008583d873713c700fe5412449 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0913a 924562008583d873713c700fe5412449 90 PANTHER PTHR33293 1 89 7.8E-21 T 21-04-2016 SDY_0913a 924562008583d873713c700fe5412449 90 PANTHER PTHR33293:SF2 1 89 7.8E-21 T 21-04-2016 SDY_0913a 924562008583d873713c700fe5412449 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 PANTHER PTHR18964 63 403 2.8E-257 T 21-04-2016 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 PANTHER PTHR18964:SF127 63 403 2.8E-257 T 21-04-2016 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 Gene3D G3DSA:1.10.10.10 12 80 6.8E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 Gene3D G3DSA:3.30.420.40 83 223 1.4E-32 T 21-04-2016 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 Gene3D G3DSA:3.30.420.40 224 375 1.7E-43 T 21-04-2016 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 SUPERFAMILY SSF46785 12 77 1.18E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 SUPERFAMILY SSF53067 87 391 4.51E-45 T 21-04-2016 SDY_1562 f0e6487e50dc9c23145997ea5db1b426 406 Pfam PF00480 ROK family 91 389 4.1E-52 T 21-04-2016 IPR000600 ROK family SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 Gene3D G3DSA:3.40.50.300 3 233 3.0E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 SUPERFAMILY SSF52540 3 229 4.92E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 Pfam PF00005 ABC transporter 19 167 4.2E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 PANTHER PTHR24220:SF582 5 238 7.7E-85 T 21-04-2016 SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 PANTHER PTHR24220 5 238 7.7E-85 T 21-04-2016 SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1240 4a87bb848d1f66339cf9da67aefacd2c 252 SMART SM00382 28 215 3.6E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 SUPERFAMILY SSF53383 19 400 4.17E-125 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 Gene3D G3DSA:3.40.640.10 61 303 8.2E-91 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 PANTHER PTHR11986 1 404 3.9E-213 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 Pfam PF00202 Aminotransferase class-III 26 400 1.3E-140 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 2.1E-204 T 21-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 1.3E-148 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 PANTHER PTHR11986:SF71 1 404 3.9E-213 T 21-04-2016 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.352 T 21-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 Gene3D G3DSA:3.90.1150.10 307 402 7.3E-36 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3521 863069ed92e0ca6caa7aa28c123df114 406 Gene3D G3DSA:3.90.1150.10 13 60 7.3E-36 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 PANTHER PTHR10342:SF199 84 514 5.2E-112 T 21-04-2016 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 Pfam PF00884 Sulfatase 86 418 3.4E-84 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 ProSitePatterns PS00149 Sulfatases signature 2. 180 190 - T 21-04-2016 IPR024607 Sulfatase, conserved site SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 PANTHER PTHR10342 84 514 5.2E-112 T 21-04-2016 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 ProSitePatterns PS00523 Sulfatases signature 1. 134 146 - T 21-04-2016 IPR024607 Sulfatase, conserved site SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 Gene3D G3DSA:3.40.720.10 84 467 5.2E-89 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 Gene3D G3DSA:3.30.1120.10 468 536 4.7E-4 T 21-04-2016 SDY_3945 2fe55f804e06e6bbfec11044e4f5c062 551 SUPERFAMILY SSF53649 83 542 2.62E-90 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 SUPERFAMILY SSF118196 1 229 4.05E-85 T 21-04-2016 IPR023370 TsaA-like domain SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 PANTHER PTHR12818:SF6 1 235 2.0E-146 T 21-04-2016 SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.2E-41 T 21-04-2016 IPR023370 TsaA-like domain SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 148 6.1E-62 T 21-04-2016 IPR023370 TsaA-like domain SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 PANTHER PTHR12818 1 235 2.0E-146 T 21-04-2016 SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 Gene3D G3DSA:2.40.30.70 4 157 1.9E-52 T 21-04-2016 IPR023370 TsaA-like domain SDY_0214 0f024ecbe6721fc6db3352217cc12d7d 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 21-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 Gene3D G3DSA:3.30.360.10 149 331 4.6E-66 T 21-04-2016 SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 SUPERFAMILY SSF55347 132 296 6.7E-23 T 21-04-2016 SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 PANTHER PTHR22604 7 322 3.9E-157 T 21-04-2016 SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 Gene3D G3DSA:3.40.50.720 7 148 9.3E-42 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 124 2.3E-27 T 21-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 SUPERFAMILY SSF51735 7 158 1.83E-42 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3272 250d08bfe19ca044890b39fa940c0aa3 334 PANTHER PTHR22604:SF76 7 322 3.9E-157 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.4E-29 T 21-04-2016 IPR000362 Fumarate lyase family SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.4E-29 T 21-04-2016 IPR000362 Fumarate lyase family SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.4E-29 T 21-04-2016 IPR000362 Fumarate lyase family SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.4E-29 T 21-04-2016 IPR000362 Fumarate lyase family SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Gene3D G3DSA:1.10.40.30 375 432 3.3E-31 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.672 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 SUPERFAMILY SSF48557 3 456 2.2E-143 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Gene3D G3DSA:1.20.200.10 108 374 1.7E-104 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 5.6E-216 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PANTHER PTHR11444:SF3 3 456 2.6E-245 T 21-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Pfam PF00206 Lyase 6 301 6.6E-101 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PANTHER PTHR11444 3 456 2.6E-245 T 21-04-2016 IPR000362 Fumarate lyase family SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.0E-68 T 21-04-2016 SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Gene3D G3DSA:1.10.275.10 1 107 1.5E-37 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal SDY_3795 dcfc86225cb4e6d1d7ba5bce620c9cae 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.2E-25 T 21-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3515 95b7b976b596723a93e64e511b204154 340 PANTHER PTHR10794 17 336 1.8E-94 T 21-04-2016 SDY_3515 95b7b976b596723a93e64e511b204154 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 239 280 - T 21-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SDY_3515 95b7b976b596723a93e64e511b204154 340 PIRSF PIRSF005211 5 340 3.6E-111 T 21-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SDY_3515 95b7b976b596723a93e64e511b204154 340 Pfam PF00561 alpha/beta hydrolase fold 73 312 2.8E-30 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_3515 95b7b976b596723a93e64e511b204154 340 Gene3D G3DSA:3.40.50.1820 54 184 1.5E-28 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3515 95b7b976b596723a93e64e511b204154 340 Gene3D G3DSA:3.40.50.1820 260 336 1.5E-28 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3515 95b7b976b596723a93e64e511b204154 340 SUPERFAMILY SSF53474 38 312 8.95E-38 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3515 95b7b976b596723a93e64e511b204154 340 PANTHER PTHR10794:SF46 17 336 1.8E-94 T 21-04-2016 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PANTHER PTHR10381 2 207 4.2E-145 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 Gene3D G3DSA:3.90.226.10 16 205 7.0E-91 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.936 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 Pfam PF00574 Clp protease 25 205 5.2E-89 T 21-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 21-04-2016 IPR018215 ClpP, Ser active site SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 21-04-2016 IPR033135 ClpP, histidine active site SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PANTHER PTHR10381:SF22 2 207 4.2E-145 T 21-04-2016 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 SUPERFAMILY SSF52096 23 206 1.77E-75 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 7.2E-112 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_0295 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-54 T 21-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 PANTHER PTHR10788 2 172 1.6E-115 T 21-04-2016 SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 PANTHER PTHR10788:SF42 2 172 1.6E-115 T 21-04-2016 SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 SUPERFAMILY SSF56784 3 167 2.73E-23 T 21-04-2016 IPR023214 HAD-like domain SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 Gene3D G3DSA:3.40.50.1000 4 14 1.0E-24 T 21-04-2016 IPR023214 HAD-like domain SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 Gene3D G3DSA:3.40.50.1000 89 181 1.0E-24 T 21-04-2016 IPR023214 HAD-like domain SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 2 168 2.4E-60 T 21-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SDY_1194 f2560e2922b42d02b47bbce0a07fd6e8 190 Pfam PF02358 Trehalose-phosphatase 3 153 3.5E-36 T 21-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PANTHER PTHR32071 5 98 3.4E-34 T 21-04-2016 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 21-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 SDY_3438 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 Gene3D G3DSA:3.40.50.300 3 229 1.6E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 PANTHER PTHR24220 9 381 2.1E-232 T 21-04-2016 SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 SUPERFAMILY SSF52540 6 230 3.38E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 SUPERFAMILY SSF52540 274 484 4.95E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 Gene3D G3DSA:3.40.50.300 274 491 7.3E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 PANTHER PTHR24220:SF516 9 381 2.1E-232 T 21-04-2016 SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 SMART SM00382 32 220 2.3E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 SMART SM00382 281 476 1.6E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 Pfam PF00005 ABC transporter 23 172 1.3E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1121 956179c259b2ef0e960e3bb04fe5024c 504 Pfam PF00005 ABC transporter 275 427 1.4E-17 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 Pfam PF01048 Phosphorylase superfamily 21 246 1.1E-40 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 PANTHER PTHR21234:SF22 1 253 2.0E-197 T 21-04-2016 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.5E-132 T 21-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 Gene3D G3DSA:3.40.50.1580 5 252 7.4E-85 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 SUPERFAMILY SSF53167 6 250 4.58E-73 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 PANTHER PTHR21234 1 253 2.0E-197 T 21-04-2016 IPR018017 Nucleoside phosphorylase SDY_3912 4b2854ef28a7ae4768468e32e4e24cb2 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 21-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Pfam PF01842 ACT domain 345 401 5.2E-7 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 PANTHER PTHR10996 1 368 1.1E-248 T 21-04-2016 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Gene3D G3DSA:3.40.50.720 121 297 2.9E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.1E-38 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 SUPERFAMILY SSF55021 328 409 1.15E-20 T 21-04-2016 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 SUPERFAMILY SSF51735 108 295 7.99E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Gene3D G3DSA:3.30.70.260 324 409 1.1E-28 T 21-04-2016 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 SUPERFAMILY SSF52283 7 138 1.79E-50 T 21-04-2016 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 PANTHER PTHR10996:SF18 1 368 1.1E-248 T 21-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Gene3D G3DSA:3.40.50.720 8 120 2.5E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_3169 47c1d3c1854bb19ddf6dcc1e0b09de6b 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.6E-50 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 SUPERFAMILY SSF52540 2 166 5.07E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 PANTHER PTHR19136:SF82 3 140 2.1E-39 T 21-04-2016 SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 164 5.9E-50 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 139 1.6E-49 T 21-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 Gene3D G3DSA:3.40.50.300 1 166 6.6E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3889 5724af6cc42150503b6b26b0b50b7e24 170 PANTHER PTHR19136 3 140 2.1E-39 T 21-04-2016 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 SMART SM00852 14 158 1.1E-29 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 Gene3D G3DSA:3.40.980.10 8 169 1.2E-50 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.5E-83 T 21-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 PIRSF PIRSF006443 1 166 2.7E-62 T 21-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 PANTHER PTHR10192:SF18 5 170 5.4E-95 T 21-04-2016 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 PANTHER PTHR10192 5 170 5.4E-95 T 21-04-2016 SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 SUPERFAMILY SSF53218 7 168 3.14E-46 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 5.5E-39 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0824 810996d1a10f8bf0735299a9ddda7795 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 2.3E-32 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 Pfam PF00871 Acetokinase family 11 390 1.4E-167 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 SUPERFAMILY SSF53067 157 396 3.96E-85 T 21-04-2016 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 Hamap MF_00020 Acetate kinase [ackA]. 1 400 162.402 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PANTHER PTHR21060:SF17 7 406 0.0 T 21-04-2016 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 SUPERFAMILY SSF53067 9 195 5.18E-65 T 21-04-2016 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PIRSF PIRSF000722 7 401 3.0E-134 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 378 390 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 11 22 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 203 224 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 300 313 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 173 186 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PRINTS PR00471 Acetate kinase family signature 322 338 2.4E-47 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 PANTHER PTHR21060 7 406 0.0 T 21-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 Gene3D G3DSA:3.30.420.40 11 204 1.2E-11 T 21-04-2016 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 Gene3D G3DSA:3.30.420.40 205 395 4.3E-71 T 21-04-2016 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 Hamap MF_01881 Propionate kinase [tdcD]. 5 406 78.4 T 21-04-2016 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013|UniPathway: UPA00052 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 TIGRFAM TIGR00016 ackA: acetate kinase 8 397 3.1E-172 T 21-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_3307 9eec22a711ae83b621c6afccb356ff1f 406 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 11 22 - T 21-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SDY_2042 6d811a959a23ed1a3377425992e348e2 180 PANTHER PTHR35602:SF2 1 180 9.8E-144 T 21-04-2016 SDY_2042 6d811a959a23ed1a3377425992e348e2 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.8E-72 T 21-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SDY_2042 6d811a959a23ed1a3377425992e348e2 180 PANTHER PTHR35602 1 180 9.8E-144 T 21-04-2016 SDY_2042 6d811a959a23ed1a3377425992e348e2 180 Gene3D G3DSA:3.40.50.1820 2 77 4.9E-5 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2042 6d811a959a23ed1a3377425992e348e2 180 SUPERFAMILY SSF53474 2 176 4.47E-8 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2042 6d811a959a23ed1a3377425992e348e2 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 56.44 T 21-04-2016 IPR022987 Uncharacterised protein family UPF0227 SDY_1867 2d2862cab468163f13d0827398d66347 299 Gene3D G3DSA:2.40.50.100 57 91 2.4E-19 T 21-04-2016 SDY_1867 2d2862cab468163f13d0827398d66347 299 Gene3D G3DSA:2.40.50.100 165 198 2.4E-19 T 21-04-2016 SDY_1867 2d2862cab468163f13d0827398d66347 299 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 244 2.0E-18 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_1867 2d2862cab468163f13d0827398d66347 299 PANTHER PTHR30367 9 299 1.1E-159 T 21-04-2016 SDY_1867 2d2862cab468163f13d0827398d66347 299 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 291 7.5E-9 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_1867 2d2862cab468163f13d0827398d66347 299 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 244 1.2E-39 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_1867 2d2862cab468163f13d0827398d66347 299 SUPERFAMILY SSF111369 56 232 7.32E-26 T 21-04-2016 SDY_1867 2d2862cab468163f13d0827398d66347 299 PANTHER PTHR30367:SF5 9 299 1.1E-159 T 21-04-2016 SDY_4283 4c7f4d37ee5f227c696235bc2b2d9035 147 PANTHER PTHR38767 2 146 2.0E-67 T 21-04-2016 SDY_4283 4c7f4d37ee5f227c696235bc2b2d9035 147 Gene3D G3DSA:3.40.50.10110 1 144 1.1E-52 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SDY_4283 4c7f4d37ee5f227c696235bc2b2d9035 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 4.1E-39 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SDY_4283 4c7f4d37ee5f227c696235bc2b2d9035 147 SUPERFAMILY SSF102400 1 145 3.53E-47 T 21-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 PANTHER PTHR24221 2 586 3.8E-202 T 21-04-2016 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 Pfam PF00005 ABC transporter 352 500 1.3E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 SUPERFAMILY SSF52540 326 572 8.4E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 Gene3D G3DSA:1.20.1560.10 7 319 1.8E-70 T 21-04-2016 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 SUPERFAMILY SSF90123 7 327 4.58E-71 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 Pfam PF00664 ABC transporter transmembrane region 22 291 8.4E-36 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 Gene3D G3DSA:3.40.50.300 337 564 1.1E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0385 94e7819799e2686648f1fe5a8898c0d8 590 SMART SM00382 361 547 1.8E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 PANTHER PTHR30136:SF15 1 268 3.8E-222 T 21-04-2016 SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 PANTHER PTHR30136 1 268 3.8E-222 T 21-04-2016 SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 SUPERFAMILY SSF55781 86 266 2.42E-48 T 21-04-2016 IPR029016 GAF domain-like SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 SUPERFAMILY SSF46785 22 94 9.89E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 Gene3D G3DSA:1.10.10.10 19 92 5.7E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 SMART SM00346 21 111 3.0E-35 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 Gene3D G3DSA:3.30.450.40 93 267 7.5E-53 T 21-04-2016 IPR029016 GAF domain-like SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 Pfam PF09339 IclR helix-turn-helix domain 23 73 6.5E-12 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_0396 146e167c2e5ca2f2572c6610561b3b89 271 Pfam PF01614 Bacterial transcriptional regulator 141 263 2.8E-41 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 PANTHER PTHR30451 143 403 2.2E-210 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 PANTHER PTHR30451 1 122 2.2E-210 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 Pfam PF00577 Outer membrane usher protein 147 402 7.7E-112 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 PANTHER PTHR30451:SF2 143 403 2.2E-210 T 21-04-2016 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 PANTHER PTHR30451:SF2 1 122 2.2E-210 T 21-04-2016 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 258 268 - T 21-04-2016 IPR018030 Fimbrial membrane usher, conserved site SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 Pfam PF13954 PapC N-terminal domain 5 111 6.8E-29 T 21-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 SDY_4570 b86ab27ea0f78d63633aa6d7d9e86f69 403 SUPERFAMILY SSF141729 20 102 1.31E-23 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 Pfam PF07690 Major Facilitator Superfamily 22 334 1.3E-8 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 PANTHER PTHR23515:SF1 354 376 1.5E-191 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 PANTHER PTHR23515:SF1 27 334 1.5E-191 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 SUPERFAMILY SSF103473 22 377 3.92E-24 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 PANTHER PTHR23515 354 376 1.5E-191 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 PANTHER PTHR23515 27 334 1.5E-191 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 Gene3D G3DSA:1.20.1250.20 214 377 2.6E-6 T 21-04-2016 SDY_1647 80d369c6dbda2b2f9742cb66eca2edd2 387 Gene3D G3DSA:1.20.1250.20 25 191 1.3E-10 T 21-04-2016 SDY_3507 4db436295fbcd8bf11e7e88635b055a7 244 Pfam PF08348 YheO-like PAS domain 33 141 2.3E-35 T 21-04-2016 IPR013559 YheO-like SDY_3507 4db436295fbcd8bf11e7e88635b055a7 244 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 31 157 6.0E-71 T 21-04-2016 IPR013559 YheO-like SDY_3507 4db436295fbcd8bf11e7e88635b055a7 244 Pfam PF13309 HTH domain 175 232 3.0E-19 T 21-04-2016 SDY_3507 4db436295fbcd8bf11e7e88635b055a7 244 PANTHER PTHR35568 14 241 4.9E-183 T 21-04-2016 SDY_3507 4db436295fbcd8bf11e7e88635b055a7 244 PANTHER PTHR35568:SF3 14 241 4.9E-183 T 21-04-2016 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 Gene3D G3DSA:3.40.50.2000 6 154 6.1E-39 T 21-04-2016 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 PANTHER PTHR30160 2 324 8.8E-95 T 21-04-2016 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 7 344 2.8E-185 T 21-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 PANTHER PTHR30160:SF1 2 324 8.8E-95 T 21-04-2016 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 SUPERFAMILY SSF53756 6 344 2.72E-81 T 21-04-2016 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 326 2.6E-67 T 21-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SDY_4062 f8d0101a4f0f5aeb7cdd01cce4e4acc5 352 Gene3D G3DSA:3.40.50.2000 171 343 2.4E-49 T 21-04-2016 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Gene3D G3DSA:3.40.50.970 1 168 8.3E-51 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 SUPERFAMILY SSF52518 2 169 2.24E-42 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.7E-41 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 PANTHER PTHR18968:SF12 1 572 0.0 T 21-04-2016 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.1E-29 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 SUPERFAMILY SSF52467 182 352 6.1E-43 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 4.9E-40 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 PANTHER PTHR18968 1 572 0.0 T 21-04-2016 SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 SUPERFAMILY SSF52518 357 557 1.11E-59 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Gene3D G3DSA:3.40.50.970 350 550 4.1E-61 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2392 49050f5a6f396067e85c49b1f9a61ed8 572 Gene3D G3DSA:3.40.50.1220 185 341 2.7E-43 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 PANTHER PTHR24220:SF471 4 251 9.6E-142 T 21-04-2016 SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 Gene3D G3DSA:3.40.50.300 4 239 4.4E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 Pfam PF00005 ABC transporter 18 166 2.4E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 SMART SM00382 27 215 3.4E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 SUPERFAMILY SSF52540 3 227 6.92E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4293 8628d87bfbdfad760fac5bd2b3f89e1b 255 PANTHER PTHR24220 4 251 9.6E-142 T 21-04-2016 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.286.20 183 226 5.7E-20 T 21-04-2016 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 227 262 1.6E-31 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 142 178 1.6E-31 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Pfam PF00889 Elongation factor TS 71 263 1.5E-66 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 PANTHER PTHR11741 1 283 3.7E-146 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 142 281 1.31E-53 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 56 139 1.24E-20 T 21-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.8.10 2 55 7.0E-28 T 21-04-2016 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.24 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 21-04-2016 IPR009060 UBA-like GO:0005515 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 21-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SDY_0186 5c95adf3bad4ca4fb76bb94204974137 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 3.1E-123 T 21-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SDY_0156 1751e491469851c9ad747f506ac6c27b 125 Pfam PF03400 IS1 transposase 1 125 3.9E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0156 1751e491469851c9ad747f506ac6c27b 125 PANTHER PTHR33293 1 124 4.1E-42 T 21-04-2016 SDY_0753 1751e491469851c9ad747f506ac6c27b 125 Pfam PF03400 IS1 transposase 1 125 3.9E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0753 1751e491469851c9ad747f506ac6c27b 125 PANTHER PTHR33293 1 124 4.1E-42 T 21-04-2016 SDY_0850 57eb7b0705baaa647bd13e391c21c544 267 Pfam PF00665 Integrase core domain 72 186 5.7E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0850 57eb7b0705baaa647bd13e391c21c544 267 SUPERFAMILY SSF53098 65 229 9.86E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0850 57eb7b0705baaa647bd13e391c21c544 267 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_0850 57eb7b0705baaa647bd13e391c21c544 267 Gene3D G3DSA:3.30.420.10 66 226 4.9E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0850 57eb7b0705baaa647bd13e391c21c544 267 Pfam PF13276 HTH-like domain 5 47 8.7E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 PANTHER PTHR30053:SF5 1 190 5.2E-133 T 21-04-2016 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 7.0E-17 T 21-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.30.30.30 1 65 7.0E-16 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 132 189 6.68E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 PANTHER PTHR30053 1 190 5.2E-133 T 21-04-2016 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 67 131 2.4E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 SMART SM01185 69 125 1.4E-13 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 67 130 2.27E-11 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 132 189 1.1E-22 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 21-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 PIRSF PIRSF005901 1 190 1.4E-59 T 21-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 6.9E-103 T 21-04-2016 IPR011897 Translation elongation factor P-like, YeiP SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 1.7E-13 T 21-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.4E-18 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50104 1 65 2.71E-11 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.611 T 21-04-2016 IPR011897 Translation elongation factor P-like, YeiP SDY_0908 d0f6208c7ec49867d6a18499e56be373 190 SMART SM00841 133 188 1.7E-26 T 21-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SMART SM00388 240 304 1.8E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 1.8E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.6E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.6E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.6E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.6E-12 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 7.8E-20 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 Pfam PF00672 HAMP domain 168 235 8.1E-16 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 Gene3D G3DSA:1.10.287.130 232 290 7.8E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SUPERFAMILY SSF47384 223 304 6.28E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SUPERFAMILY SSF55874 293 459 3.14E-40 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SMART SM00387 349 461 9.0E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SUPERFAMILY SSF158472 188 236 1.57E-8 T 21-04-2016 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PANTHER PTHR24423 181 462 2.5E-187 T 21-04-2016 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PANTHER PTHR24423 1 10 2.5E-187 T 21-04-2016 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 SMART SM00304 187 239 6.2E-13 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PANTHER PTHR24423:SF531 181 462 2.5E-187 T 21-04-2016 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 PANTHER PTHR24423:SF531 1 10 2.5E-187 T 21-04-2016 SDY_2187 ddc05a2ee86cf47cfc25ea82c4fb790d 467 Gene3D G3DSA:3.30.565.10 291 461 7.0E-39 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.9E-205 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 PANTHER PTHR11986:SF5 1 426 2.2E-240 T 21-04-2016 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 Gene3D G3DSA:3.40.640.10 70 315 4.0E-83 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 PANTHER PTHR11986 1 426 2.2E-240 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 108.321 T 21-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 SUPERFAMILY SSF53383 2 425 3.8E-138 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 Gene3D G3DSA:3.90.1150.10 2 69 1.8E-45 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 Gene3D G3DSA:3.90.1150.10 319 425 1.8E-45 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_0170 ea9646ffee9a31b0cfe0a77b3bf21436 426 Pfam PF00202 Aminotransferase class-III 32 397 9.9E-79 T 21-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 PANTHER PTHR37423 1 245 3.1E-119 T 21-04-2016 SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 SUPERFAMILY SSF48452 27 121 2.53E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 Gene3D G3DSA:1.25.40.10 29 234 3.1E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 Pfam PF13525 Outer membrane lipoprotein 28 236 5.7E-85 T 21-04-2016 SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 49.074 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD SDY_2838 8ddd1f38f000a376673bb7fb3317ff3b 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 1.2E-88 T 21-04-2016 IPR017689 Outer membrane protein assembly factor BamD SDY_0009 918a2283398b45aef599bc51f63ac02d 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 7.0E-28 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0009 918a2283398b45aef599bc51f63ac02d 195 Gene3D G3DSA:3.40.980.10 2 188 6.3E-53 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0009 918a2283398b45aef599bc51f63ac02d 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 2.2E-40 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0009 918a2283398b45aef599bc51f63ac02d 195 PANTHER PTHR10192 1 192 2.6E-92 T 21-04-2016 SDY_0009 918a2283398b45aef599bc51f63ac02d 195 SMART SM00852 7 153 1.0E-22 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0009 918a2283398b45aef599bc51f63ac02d 195 SUPERFAMILY SSF53218 3 188 9.29E-49 T 21-04-2016 IPR001453 MoaB/Mog domain SDY_0009 918a2283398b45aef599bc51f63ac02d 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 21-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 Gene3D G3DSA:3.40.50.700 49 226 1.7E-56 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 Gene3D G3DSA:4.10.480.10 227 310 1.6E-38 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PIRSF PIRSF000310 5 357 2.8E-146 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.6E-28 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PANTHER PTHR30013 1 367 0.0 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.0E-118 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 360 7.2E-204 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 1.4E-31 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 1.1E-6 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 PANTHER PTHR30013:SF9 1 367 0.0 T 21-04-2016 SDY_0947 dc8ab3c05eace93812417bcdcbf160b7 372 SUPERFAMILY SSF56770 46 310 6.54E-87 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF52009 125 246 4.58E-37 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF51621 249 549 2.62E-110 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.5E-30 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PANTHER PTHR22931 66 550 1.1E-221 T 21-04-2016 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 9.4E-274 T 21-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 PIRSF PIRSF000732 1 574 1.1E-218 T 21-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:1.10.274.10 23 132 1.2E-39 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 4.7E-127 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:3.50.30.10 133 255 3.0E-42 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF47831 23 143 3.27E-34 T 21-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:3.20.20.60 256 572 6.2E-116 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_2613 78e039f50c802839e4b1b5fa8f5d14eb 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 24 649 0.0 T 21-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PANTHER PTHR11575:SF6 7 648 0.0 T 21-04-2016 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 ProSitePatterns PS00785 5'-nucleotidase signature 1. 26 38 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 ProSitePatterns PS00786 5'-nucleotidase signature 2. 111 122 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 SUPERFAMILY SSF55816 357 599 1.44E-38 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PANTHER PTHR11575 7 648 0.0 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 Gene3D G3DSA:3.60.21.10 14 361 1.4E-92 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 552 4.1E-24 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 285 305 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 430 453 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 532 551 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 24 42 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 245 268 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 PRINTS PR01607 Apyrase family signature 217 234 1.0E-27 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 Pfam PF00149 Calcineurin-like phosphoesterase 26 258 5.7E-10 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 SUPERFAMILY SSF56300 21 355 6.79E-82 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_4383 553b81ec492abde9a6812281c2d7e39e 649 Gene3D G3DSA:3.90.780.10 362 598 1.0E-44 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 Pfam PF00884 Sulfatase 4 341 1.1E-79 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 Gene3D G3DSA:3.30.1120.10 373 453 6.8E-20 T 21-04-2016 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 PANTHER PTHR10342:SF207 2 461 1.5E-105 T 21-04-2016 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 PANTHER PTHR10342 2 461 1.5E-105 T 21-04-2016 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 Gene3D G3DSA:3.40.720.10 2 354 1.3E-86 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 SUPERFAMILY SSF53649 2 440 3.14E-104 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 21-04-2016 IPR024607 Sulfatase, conserved site SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 ProSitePatterns PS00523 Sulfatases signature 1. 50 62 - T 21-04-2016 IPR024607 Sulfatase, conserved site SDY_4162 1e01ac70b223d8080105b99ba9f802c4 497 Pfam PF16347 Domain of unknown function (DUF4976) 385 439 1.3E-7 T 21-04-2016 IPR032506 Domain of unknown function DUF4976 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 Gene3D G3DSA:2.170.130.10 30 147 4.6E-39 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 Gene3D G3DSA:2.40.170.20 148 660 5.2E-75 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 30 660 1.4E-177 T 21-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 Pfam PF00593 TonB dependent receptor 413 658 1.4E-26 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 SUPERFAMILY SSF56935 30 660 2.26E-102 T 21-04-2016 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 PANTHER PTHR32552 29 660 0.0 T 21-04-2016 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 PANTHER PTHR32552:SF22 29 660 0.0 T 21-04-2016 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 147 3.2E-25 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_3554 ac3daf8b459666c3773b77aa50642ea9 660 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 660 7.2E-136 T 21-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 SDY_3228 5f3be0266908c7a94db10ee79d5d5b67 66 Hamap MF_00525 Surface composition regulator [glgS]. 1 65 26.981 T 21-04-2016 IPR015065 Surface composition regulator SDY_3228 5f3be0266908c7a94db10ee79d5d5b67 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 1 66 4.0E-34 T 21-04-2016 IPR015065 Surface composition regulator SDY_3228 5f3be0266908c7a94db10ee79d5d5b67 66 SUPERFAMILY SSF109747 1 66 1.57E-42 T 21-04-2016 IPR015065 Surface composition regulator SDY_3228 5f3be0266908c7a94db10ee79d5d5b67 66 Pfam PF08971 Glycogen synthesis protein 1 66 3.6E-40 T 21-04-2016 IPR015065 Surface composition regulator SDY_3228 5f3be0266908c7a94db10ee79d5d5b67 66 Gene3D G3DSA:1.20.970.20 1 66 3.2E-40 T 21-04-2016 IPR015065 Surface composition regulator SDY_1825 1215c061daa567e9fed616543f92b73d 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.3E-7 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_1825 1215c061daa567e9fed616543f92b73d 433 SUPERFAMILY SSF47384 194 271 8.04E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PANTHER PTHR24423:SF564 6 101 6.6E-156 T 21-04-2016 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PANTHER PTHR24423:SF564 152 428 6.6E-156 T 21-04-2016 SDY_1825 1215c061daa567e9fed616543f92b73d 433 SUPERFAMILY SSF55874 261 424 7.07E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1825 1215c061daa567e9fed616543f92b73d 433 Gene3D G3DSA:3.30.565.10 274 425 1.3E-35 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1825 1215c061daa567e9fed616543f92b73d 433 Gene3D G3DSA:1.10.287.130 201 267 4.6E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_1825 1215c061daa567e9fed616543f92b73d 433 SMART SM00304 158 210 1.7E-5 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_1825 1215c061daa567e9fed616543f92b73d 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.3E-18 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1825 1215c061daa567e9fed616543f92b73d 433 SMART SM00388 211 271 5.3E-8 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.61E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.61E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.61E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.61E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PANTHER PTHR24423 6 101 6.6E-156 T 21-04-2016 SDY_1825 1215c061daa567e9fed616543f92b73d 433 PANTHER PTHR24423 152 428 6.6E-156 T 21-04-2016 SDY_1825 1215c061daa567e9fed616543f92b73d 433 SMART SM00387 315 425 5.5E-34 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 SUPERFAMILY SSF53335 258 373 1.34E-40 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 SMART SM00981 56 154 6.8E-20 T 21-04-2016 IPR004114 THUMP domain GO:0003723 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Gene3D G3DSA:3.40.50.150 432 700 2.3E-75 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.8E-65 T 21-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 4.8E-5 T 21-04-2016 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 4.8E-5 T 21-04-2016 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 PANTHER PTHR18895:SF62 401 681 4.6E-135 T 21-04-2016 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Gene3D G3DSA:3.40.50.150 147 214 1.6E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Gene3D G3DSA:3.40.50.150 255 334 1.6E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 6.6E-20 T 21-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 SUPERFAMILY SSF53335 396 698 1.1E-69 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 PIRSF PIRSF037618 1 702 1.8E-295 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 PANTHER PTHR18895 401 681 4.6E-135 T 21-04-2016 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 SUPERFAMILY SSF53335 145 217 1.34E-40 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.744 T 21-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0921 b00eeb53bfe74adeee59d9323fe48ba7 702 Pfam PF02926 THUMP domain 23 153 3.7E-20 T 21-04-2016 IPR004114 THUMP domain GO:0003723 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 3.7E-124 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 6.2E-94 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 8 255 6.0E-61 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 256 434 2.0E-49 T 21-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 Gene3D G3DSA:3.20.20.60 4 417 2.9E-172 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 SUPERFAMILY SSF51621 4 417 7.18E-157 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 21-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 PANTHER PTHR21631 4 434 1.3E-175 T 21-04-2016 SDY_4328 f995a4b2b1deaa2b2ef3164261dcedc9 434 PIRSF PIRSF001362 1 434 6.4E-229 T 21-04-2016 SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 2.1E-54 T 21-04-2016 SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 Gene3D G3DSA:3.40.50.720 14 259 6.5E-78 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.7E-37 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.0E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 4.0E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 4.0E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PANTHER PTHR24322:SF378 23 150 1.6E-52 T 21-04-2016 SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PANTHER PTHR24322:SF378 166 198 1.6E-52 T 21-04-2016 SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 SUPERFAMILY SSF51735 17 260 8.83E-75 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PANTHER PTHR24322 23 150 1.6E-52 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 PANTHER PTHR24322 166 198 1.6E-52 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2976 3f0504f7fc2628982e4e45c73319b995 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 99 104 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 TIGRFAM TIGR00608 radc: DNA repair protein RadC 28 150 2.4E-43 T 21-04-2016 IPR001405 RadC protein SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 PANTHER PTHR30471 16 150 7.6E-104 T 21-04-2016 SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 PANTHER PTHR30471:SF4 16 150 7.6E-104 T 21-04-2016 SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 Pfam PF04002 RadC-like JAB domain 30 149 1.7E-42 T 21-04-2016 IPR025657 RadC-like JAB domain SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 SUPERFAMILY SSF102712 75 116 5.1E-5 T 21-04-2016 SDY_1013 5990440b78f231dbb846ea49dd153fc4 150 Gene3D G3DSA:3.40.140.10 28 150 5.0E-49 T 21-04-2016 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 2.8E-36 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 493 3.0E-25 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 PANTHER PTHR18968 1 493 0.0 T 21-04-2016 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 SUPERFAMILY SSF52467 186 376 2.89E-47 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 PANTHER PTHR18968:SF14 1 493 0.0 T 21-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 495 0.0 T 21-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Gene3D G3DSA:3.40.50.1220 190 357 2.2E-51 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 3.0E-52 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Gene3D G3DSA:3.40.50.970 2 182 3.0E-62 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 Gene3D G3DSA:3.40.50.970 362 490 2.0E-43 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 SUPERFAMILY SSF52518 369 491 4.29E-36 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0395 40c2ea4342314dfd20927added3ca9cb 519 SUPERFAMILY SSF52518 3 186 9.58E-50 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3134 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 21-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482:SF36 463 621 3.5E-294 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482:SF36 1 390 3.5E-294 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF51419 92 369 1.48E-67 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3134 412624b5c1215b2bf08615145be9629f 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.749 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 99 368 8.0E-74 T 21-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF50621 482 584 4.88E-7 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 1.5E-280 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 21-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 391 585 3.4E-23 T 21-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.7E-74 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482 463 621 3.5E-294 T 21-04-2016 SDY_3134 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482 1 390 3.5E-294 T 21-04-2016 SDY_3134 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 21-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 356 380 4.6E-12 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 479 611 4.6E-12 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_3134 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:3.20.20.10 94 355 6.7E-61 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3134 412624b5c1215b2bf08615145be9629f 658 PIRSF PIRSF001336 17 658 3.2E-257 T 21-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 PANTHER PTHR10799 3 115 5.8E-19 T 21-04-2016 SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 3 119 1.1E-27 T 21-04-2016 IPR000160 GGDEF domain SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 SMART SM00267 1 120 3.5E-10 T 21-04-2016 IPR000160 GGDEF domain SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 Gene3D G3DSA:3.30.70.270 3 118 4.4E-27 T 21-04-2016 SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 PANTHER PTHR10799:SF750 3 115 5.8E-19 T 21-04-2016 SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 118 3.6E-30 T 21-04-2016 IPR000160 GGDEF domain SDY_1684 39e7a7e25bc3d73fbc45b831674ac701 120 SUPERFAMILY SSF55073 2 119 8.63E-27 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1122 005c7b26a61a909f77c6da544a6ff6b9 329 PANTHER PTHR32196 21 326 3.0E-245 T 21-04-2016 SDY_1122 005c7b26a61a909f77c6da544a6ff6b9 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 316 5.4E-45 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_1122 005c7b26a61a909f77c6da544a6ff6b9 329 PANTHER PTHR32196:SF37 21 326 3.0E-245 T 21-04-2016 SDY_2204 11755dc6c60007348abfcffdfb166620 361 PANTHER PTHR10366 2 357 1.6E-192 T 21-04-2016 SDY_2204 11755dc6c60007348abfcffdfb166620 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 343 3.9E-154 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_2204 11755dc6c60007348abfcffdfb166620 361 Gene3D G3DSA:3.90.25.10 200 354 6.2E-56 T 21-04-2016 SDY_2204 11755dc6c60007348abfcffdfb166620 361 PANTHER PTHR10366:SF41 2 357 1.6E-192 T 21-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_2204 11755dc6c60007348abfcffdfb166620 361 SUPERFAMILY SSF51735 2 356 2.27E-91 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2204 11755dc6c60007348abfcffdfb166620 361 Gene3D G3DSA:3.40.50.720 2 199 2.8E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2204 11755dc6c60007348abfcffdfb166620 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 2.4E-98 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PANTHER PTHR30603 14 329 2.5E-209 T 21-04-2016 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 39.798 T 21-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Pfam PF04542 Sigma-70 region 2 94 163 3.3E-21 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PANTHER PTHR30603:SF15 14 329 2.5E-209 T 21-04-2016 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 8.5E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 8.5E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 8.5E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 8.5E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 8.5E-27 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 SUPERFAMILY SSF88659 225 323 4.09E-23 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Pfam PF04545 Sigma-70, region 4 262 315 5.9E-15 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Gene3D G3DSA:1.10.601.10 50 163 9.6E-55 T 21-04-2016 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 8.7E-145 T 21-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 21-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Gene3D G3DSA:1.10.10.10 257 322 9.2E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 3.1E-34 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2940 fba1a0f17d34cb98e2cfa173c0ecec16 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 3.0E-11 T 21-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:3.30.70.20 189 228 4.1E-25 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938:SF83 1 31 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938:SF83 163 329 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938:SF83 127 136 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:3.30.70.20 229 351 2.4E-77 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:3.30.70.20 430 459 2.4E-77 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 SUPERFAMILY SSF54862 1 496 6.59E-174 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 351 429 2.2E-28 T 21-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:1.10.3650.10 352 428 8.7E-30 T 21-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:3.30.70.20 10 26 5.3E-12 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Gene3D G3DSA:3.30.70.20 152 188 5.3E-12 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938 1 31 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938 163 329 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 PANTHER PTHR11938 127 136 3.4E-136 T 21-04-2016 SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 Pfam PF13247 4Fe-4S dicluster domain 168 264 1.2E-37 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1651 386cf80846ebd1cc52e10dd0b7e5b678 507 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 486 4.5E-285 T 21-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 SUPERFAMILY SSF55120 69 229 1.51E-38 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 PANTHER PTHR21600 1 264 1.4E-152 T 21-04-2016 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 2.7E-54 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 Pfam PF01479 S4 domain 7 52 5.5E-14 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 SMART SM00363 7 68 1.3E-13 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 5.1E-14 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 Gene3D G3DSA:3.10.290.10 6 60 6.0E-21 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 SUPERFAMILY SSF55174 7 62 5.72E-14 T 21-04-2016 SDY_4310 b90dc2868665d658cb50d93bd24b73fc 290 PANTHER PTHR21600:SF24 1 264 1.4E-152 T 21-04-2016 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 PANTHER PTHR26402 2 217 2.1E-116 T 21-04-2016 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:3.40.50.2300 2 119 5.9E-35 T 21-04-2016 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-22 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00421 147 204 2.4E-19 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00448 2 115 1.0E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 PANTHER PTHR26402:SF506 2 217 2.1E-116 T 21-04-2016 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF52172 3 161 1.46E-33 T 21-04-2016 IPR011006 CheY-like superfamily SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00072 Response regulator receiver domain 4 115 9.5E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1104 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:1.10.10.10 120 211 2.6E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Pfam PF05127 Helicase 197 337 2.0E-41 T 21-04-2016 IPR007807 Helicase domain SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Gene3D G3DSA:3.40.630.30 447 513 1.6E-10 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Gene3D G3DSA:3.40.630.30 380 413 1.6E-10 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Pfam PF13718 GNAT acetyltransferase 2 369 483 2.0E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 PANTHER PTHR10925:SF6 14 603 0.0 T 21-04-2016 SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 SUPERFAMILY SSF52540 172 285 1.59E-10 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Pfam PF17176 tRNA-binding domain 537 653 8.4E-37 T 21-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Gene3D G3DSA:3.40.50.300 169 281 4.2E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 PANTHER PTHR10925 14 603 0.0 T 21-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 SUPERFAMILY SSF55729 370 418 4.29E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 SUPERFAMILY SSF55729 454 513 4.29E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Pfam PF08351 Domain of unknown function (DUF1726) 66 148 4.8E-7 T 21-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal SDY_2661 e599f020fb995fe05bf3ad73c624647f 671 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 651 46.991 T 21-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 Pfam PF00230 Major intrinsic protein 2 215 3.5E-43 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 Gene3D G3DSA:1.20.1080.10 2 219 8.8E-59 T 21-04-2016 IPR023271 Aquaporin-like SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 SUPERFAMILY SSF81338 2 203 5.36E-58 T 21-04-2016 IPR023271 Aquaporin-like SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 215 6.9E-57 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 ProSitePatterns PS00221 MIP family signature. 61 69 - T 21-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PANTHER PTHR19139 1 198 3.8E-63 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PANTHER PTHR19139:SF103 1 198 3.8E-63 T 21-04-2016 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PRINTS PR00783 Major intrinsic protein family signature 3 22 4.1E-40 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PRINTS PR00783 Major intrinsic protein family signature 137 155 4.1E-40 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PRINTS PR00783 Major intrinsic protein family signature 80 99 4.1E-40 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PRINTS PR00783 Major intrinsic protein family signature 167 189 4.1E-40 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_2388 106e2b0969f558d8e98e1b0aa0239ce9 225 PRINTS PR00783 Major intrinsic protein family signature 43 67 4.1E-40 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Gene3D G3DSA:3.30.470.20 199 352 6.8E-61 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 SUPERFAMILY SSF56059 7 386 8.12E-110 T 21-04-2016 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 353 1.2E-121 T 21-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Gene3D G3DSA:3.20.20.60 484 791 1.6E-102 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 SUPERFAMILY SSF52009 351 468 6.93E-35 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Gene3D G3DSA:3.50.30.10 376 473 1.0E-36 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 PANTHER PTHR22931 2 271 0.0 T 21-04-2016 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 PANTHER PTHR22931 287 792 0.0 T 21-04-2016 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Gene3D G3DSA:3.30.1490.20 8 197 2.3E-69 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 21-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 PANTHER PTHR22931:SF7 2 271 0.0 T 21-04-2016 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 PANTHER PTHR22931:SF7 287 792 0.0 T 21-04-2016 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 PIRSF PIRSF000854 4 792 0.0 T 21-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 7.5E-27 T 21-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 21-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 SUPERFAMILY SSF51621 467 790 1.13E-95 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 21-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SDY_1794 89cbaffcd36b42d6ac5bd8fcc8cbd389 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 789 1.9E-59 T 21-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 7.4E-111 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 SUPERFAMILY SSF52540 46 162 1.59E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 PANTHER PTHR30160:SF13 1 310 2.1E-104 T 21-04-2016 SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 40.018 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 Gene3D G3DSA:3.40.50.300 45 108 1.3E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 Gene3D G3DSA:3.40.50.300 156 168 1.3E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 8.6E-124 T 21-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SDY_2343 3e7e2eb2ea83b959d31d147beb87cd2b 328 PANTHER PTHR30160 1 310 2.1E-104 T 21-04-2016 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 PANTHER PTHR37512 14 408 1.4E-154 T 21-04-2016 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 Gene3D G3DSA:1.10.260.40 5 58 2.6E-11 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 Gene3D G3DSA:3.40.50.300 231 400 2.4E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 Pfam PF01381 Helix-turn-helix 7 59 5.2E-9 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 SUPERFAMILY SSF47413 6 59 5.63E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.4E-166 T 21-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 Gene3D G3DSA:3.40.50.620 63 230 2.9E-52 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 SUPERFAMILY SSF52540 232 386 7.49E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 SMART SM00530 6 62 7.0E-8 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 SUPERFAMILY SSF52374 66 229 1.66E-18 T 21-04-2016 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 Pfam PF13521 AAA domain 234 394 4.3E-31 T 21-04-2016 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 PIRSF PIRSF004776 3 410 6.7E-214 T 21-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 SDY_4651 be562ed66db78e1ea8cafa30eb7ddf9e 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 5.3E-20 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 83 1.8E-33 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 21-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.6E-28 T 21-04-2016 IPR000032 Phosphocarrier HPr protein-like SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 21-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705 1 84 1.8E-40 T 21-04-2016 SDY_2612 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705:SF1 1 84 1.8E-40 T 21-04-2016 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 Gene3D G3DSA:3.90.550.10 22 301 2.6E-78 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 Gene3D G3DSA:3.90.550.10 344 386 2.6E-78 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 PANTHER PTHR22572 21 398 7.0E-184 T 21-04-2016 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF53448 378 393 7.72E-78 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF53448 20 294 7.72E-78 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF51161 313 411 2.65E-18 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 Pfam PF00483 Nucleotidyl transferase 22 291 3.2E-69 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.812 T 21-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 4.2E-157 T 21-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 21-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3576 f1dee98dc68e3f06069a54029dbd5aa2 431 PANTHER PTHR22572:SF10 21 398 7.0E-184 T 21-04-2016 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 PANTHER PTHR18895 53 343 4.2E-176 T 21-04-2016 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 SUPERFAMILY SSF53335 154 315 2.56E-32 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 PANTHER PTHR18895:SF70 53 343 4.2E-176 T 21-04-2016 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.957 T 21-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 Pfam PF05175 Methyltransferase small domain 167 333 4.8E-61 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 2.9E-57 T 21-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_4630 b81ec75a547bbfc9714c0fc07e7e9f7f 343 Gene3D G3DSA:3.40.50.150 157 332 6.3E-29 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 SUPERFAMILY SSF52540 119 253 3.66E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 SUPERFAMILY SSF52540 295 516 5.75E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 Pfam PF00005 ABC transporter 17 178 2.5E-22 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 Pfam PF00005 ABC transporter 328 459 2.5E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 PANTHER PTHR19211 1 554 0.0 T 21-04-2016 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 Gene3D G3DSA:3.40.50.300 310 537 1.1E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 Gene3D G3DSA:3.40.50.300 1 265 4.2E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 Pfam PF12848 ABC transporter 217 296 1.1E-28 T 21-04-2016 IPR032781 ABC-transporter extension domain SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 PANTHER PTHR19211:SF49 1 554 0.0 T 21-04-2016 SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 SMART SM00382 337 506 2.3E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 SMART SM00382 26 223 2.4E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3514 b272bce00bdda698c37cc0f8dfe72530 637 SUPERFAMILY SSF52540 2 92 3.66E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2926 55b20512d782897616750497d43c36a5 373 PANTHER PTHR30149 2 372 9.1E-212 T 21-04-2016 SDY_2926 55b20512d782897616750497d43c36a5 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 1.9E-179 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SDY_2926 55b20512d782897616750497d43c36a5 373 Pfam PF01924 Hydrogenase formation hypA family 15 367 1.1E-150 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SDY_2926 55b20512d782897616750497d43c36a5 373 PANTHER PTHR30149:SF0 2 372 9.1E-212 T 21-04-2016 SDY_2926 55b20512d782897616750497d43c36a5 373 PIRSF PIRSF005622 1 372 2.0E-159 T 21-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SDY_0915 533d4d718598548e8b86447389f10701 169 Gene3D G3DSA:2.60.40.1090 20 169 3.1E-31 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0915 533d4d718598548e8b86447389f10701 169 SUPERFAMILY SSF49401 20 169 7.95E-29 T 21-04-2016 IPR008966 Adhesion domain SDY_0915 533d4d718598548e8b86447389f10701 169 PANTHER PTHR33420:SF5 1 169 1.4E-105 T 21-04-2016 SDY_0915 533d4d718598548e8b86447389f10701 169 PANTHER PTHR33420 1 169 1.4E-105 T 21-04-2016 SDY_0474 13119f177bb40251c69d693b6a942708 367 Pfam PF01472 PUA domain 276 350 1.4E-22 T 21-04-2016 IPR002478 PUA domain GO:0003723 SDY_0474 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.9E-57 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SDY_0474 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.9E-57 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SDY_0474 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.9E-57 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SDY_0474 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.9E-57 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SDY_0474 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.9E-57 T 21-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SDY_0474 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:2.30.130.10 273 365 1.9E-26 T 21-04-2016 IPR015947 PUA-like domain SDY_0474 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:3.40.1160.10 3 260 1.3E-59 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0474 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF88697 276 365 1.1E-23 T 21-04-2016 IPR015947 PUA-like domain SDY_0474 13119f177bb40251c69d693b6a942708 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-44 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0474 13119f177bb40251c69d693b6a942708 367 PIRSF PIRSF000729 1 367 2.7E-147 T 21-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0474 13119f177bb40251c69d693b6a942708 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 36.214 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0474 13119f177bb40251c69d693b6a942708 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 21-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0474 13119f177bb40251c69d693b6a942708 367 SMART SM00359 276 359 7.2E-23 T 21-04-2016 IPR002478 PUA domain GO:0003723 SDY_0474 13119f177bb40251c69d693b6a942708 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 5.4E-157 T 21-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SDY_0474 13119f177bb40251c69d693b6a942708 367 PANTHER PTHR11063 3 367 1.9E-146 T 21-04-2016 SDY_0474 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF53633 6 256 1.13E-65 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 PANTHER PTHR30032 53 243 3.3E-98 T 21-04-2016 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 PANTHER PTHR30032 263 431 3.3E-98 T 21-04-2016 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 SUPERFAMILY SSF51445 81 365 1.46E-31 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 PANTHER PTHR30032:SF2 53 243 3.3E-98 T 21-04-2016 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 PANTHER PTHR30032:SF2 263 431 3.3E-98 T 21-04-2016 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 Gene3D G3DSA:3.20.20.80 89 240 1.8E-9 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_1613 9dcf231c904ff8eccd69f8cff5408b00 439 Pfam PF02638 Glycosyl hydrolase-like 10 55 390 3.2E-138 T 21-04-2016 IPR003790 Glycosyl hydrolase-like 10 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 SUPERFAMILY SSF50331 240 328 7.37E-10 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 PANTHER PTHR24220 6 247 2.1E-132 T 21-04-2016 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 Pfam PF00005 ABC transporter 21 162 7.6E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 SUPERFAMILY SSF52540 5 241 1.86E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 Gene3D G3DSA:3.40.50.300 3 237 2.5E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 PANTHER PTHR24220:SF150 6 247 2.1E-132 T 21-04-2016 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 Pfam PF08402 TOBE domain 257 331 5.2E-17 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1733 8102529d7a3411d1cf3a60e8197b82db 337 SMART SM00382 29 212 3.7E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 PANTHER PTHR30502 1 255 8.1E-221 T 21-04-2016 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 Gene3D G3DSA:3.20.20.60 6 255 3.0E-79 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 3.6E-63 T 21-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 SUPERFAMILY SSF51621 4 255 1.94E-82 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 68.74 T 21-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 PANTHER PTHR30502:SF4 1 255 8.1E-221 T 21-04-2016 SDY_3320 f89bc2de5e3cc43241e02e2ce68a68fd 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 3.0E-148 T 21-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Gene3D G3DSA:3.40.1390.20 226 366 3.1E-30 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Pfam PF07085 DRTGG domain 234 345 2.2E-29 T 21-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 3.7E-129 T 21-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 SUPERFAMILY SSF75138 230 354 3.14E-25 T 21-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Pfam PF13500 AAA domain 5 230 5.5E-47 T 21-04-2016 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Gene3D G3DSA:3.40.50.10750 525 683 1.0E-67 T 21-04-2016 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 PANTHER PTHR23406 179 714 8.4E-58 T 21-04-2016 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 Gene3D G3DSA:3.40.50.300 3 224 5.8E-11 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2493 86983f47f212c9af04668463f7e3ad49 714 SUPERFAMILY SSF52540 4 241 1.38E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2493 86983f47f212c9af04668463f7e3ad49 714 PIRSF PIRSF006107 1 714 0.0 T 21-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 PANTHER PTHR23406:SF3 179 714 8.4E-58 T 21-04-2016 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 5.6E-139 T 21-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SDY_2493 86983f47f212c9af04668463f7e3ad49 714 SUPERFAMILY SSF53659 393 711 1.77E-94 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.40.190.10 54 186 1.9E-11 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00448 959 1070 2.5E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF47384 694 778 2.16E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00388 711 777 6.8E-20 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4478 9674d157064ad7bfd398200461607454 1197 PANTHER PTHR24423:SF414 560 1113 5.7E-155 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 PANTHER PTHR24423:SF414 4 14 5.7E-155 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:1.10.287.130 711 772 1.3E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00387 824 938 5.6E-32 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4478 9674d157064ad7bfd398200461607454 1197 Pfam PF00512 His Kinase A (phospho-acceptor) domain 711 777 1.1E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.40.190.10 300 380 3.2E-12 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.40.190.10 482 520 3.2E-12 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.30.565.10 779 940 1.2E-42 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4478 9674d157064ad7bfd398200461607454 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 74 276 2.3E-13 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_4478 9674d157064ad7bfd398200461607454 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 306 520 6.9E-23 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_4478 9674d157064ad7bfd398200461607454 1197 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 825 937 2.8E-24 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4478 9674d157064ad7bfd398200461607454 1197 Pfam PF00072 Response regulator receiver domain 961 1070 1.3E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF55874 767 939 6.55E-40 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF53850 62 278 1.47E-23 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF53850 296 522 3.55E-29 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF47226 1053 1182 6.02E-15 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_4478 9674d157064ad7bfd398200461607454 1197 SUPERFAMILY SSF52172 957 1091 2.85E-36 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4478 9674d157064ad7bfd398200461607454 1197 PANTHER PTHR24423 560 1113 5.7E-155 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 PANTHER PTHR24423 4 14 5.7E-155 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:1.20.120.160 1063 1193 2.9E-11 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00073 1094 1193 7.0E-18 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.40.50.2300 957 1062 1.3E-36 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00062 303 522 6.6E-44 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_4478 9674d157064ad7bfd398200461607454 1197 SMART SM00062 57 279 5.1E-4 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_4478 9674d157064ad7bfd398200461607454 1197 Gene3D G3DSA:3.40.190.10 381 463 4.6E-4 T 21-04-2016 SDY_4478 9674d157064ad7bfd398200461607454 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 922 935 1.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4478 9674d157064ad7bfd398200461607454 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 893 1.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4478 9674d157064ad7bfd398200461607454 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 916 1.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4478 9674d157064ad7bfd398200461607454 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 879 1.7E-13 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 61.063 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 1.8E-26 T 21-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 Gene3D G3DSA:1.10.10.10 2 77 1.9E-35 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PANTHER PTHR34471:SF1 2 156 8.3E-69 T 21-04-2016 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 3.2E-49 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 8.6E-23 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 SUPERFAMILY SSF46785 3 77 1.81E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PANTHER PTHR34471 2 156 8.3E-69 T 21-04-2016 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 SUPERFAMILY SSF55252 82 151 1.05E-19 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 Gene3D G3DSA:3.30.1360.40 80 154 2.2E-27 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.3E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.3E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.3E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.3E-24 T 21-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SDY_3413 91d0535ec00ce932aac0c98e8a6bf9df 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-31 T 21-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SDY_2376 12363c218e057a84a424aab8ff60907f 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 231 5.2E-95 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SDY_2376 12363c218e057a84a424aab8ff60907f 234 PANTHER PTHR30098:SF2 1 233 3.4E-95 T 21-04-2016 SDY_2376 12363c218e057a84a424aab8ff60907f 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.607 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SDY_2376 12363c218e057a84a424aab8ff60907f 234 SUPERFAMILY SSF55729 2 228 4.56E-94 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2376 12363c218e057a84a424aab8ff60907f 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 5.1E-71 T 21-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SDY_2376 12363c218e057a84a424aab8ff60907f 234 PANTHER PTHR30098 1 233 3.4E-95 T 21-04-2016 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 SMART SM00853 438 573 1.6E-17 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Gene3D G3DSA:3.30.565.10 2 202 4.9E-78 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 SUPERFAMILY SSF118116 434 613 2.35E-43 T 21-04-2016 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.834 T 21-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Gene3D G3DSA:3.30.230.10 217 329 1.8E-37 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 21-04-2016 IPR014762 DNA mismatch repair, conserved site SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 SUPERFAMILY SSF55874 1 201 3.01E-57 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.3E-107 T 21-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Pfam PF08676 MutL C terminal dimerisation domain 435 563 1.7E-24 T 21-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.2E-12 T 21-04-2016 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 3.2E-35 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 SMART SM01340 212 331 6.7E-54 T 21-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 PANTHER PTHR10073 3 359 3.3E-158 T 21-04-2016 SDY_4419 e4d2326d9cd48df3fcdefe03bb338961 615 SUPERFAMILY SSF54211 191 331 4.17E-35 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4092 72bd3b31bc9cd67e6923900893208223 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 6.6E-81 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 6.4E-63 T 21-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 Gene3D G3DSA:3.40.50.720 3 168 2.5E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4092 72bd3b31bc9cd67e6923900893208223 451 SUPERFAMILY SSF51735 5 171 4.09E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4092 72bd3b31bc9cd67e6923900893208223 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 21-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PANTHER PTHR32092:SF6 2 451 8.6E-299 T 21-04-2016 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 SUPERFAMILY SSF56327 172 449 1.08E-74 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 Gene3D G3DSA:3.90.110.10 171 449 1.7E-84 T 21-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.4E-42 T 21-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 SDY_4092 72bd3b31bc9cd67e6923900893208223 451 PANTHER PTHR32092 2 451 8.6E-299 T 21-04-2016 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Pfam PF00085 Thioredoxin 18 120 1.8E-18 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 PANTHER PTHR10438 5 146 6.5E-74 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Gene3D G3DSA:1.25.40.10 122 208 4.4E-38 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Gene3D G3DSA:3.40.30.10 16 121 2.1E-28 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Pfam PF14559 Tetratricopeptide repeat 136 202 9.5E-23 T 21-04-2016 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Gene3D G3DSA:1.25.40.10 209 296 2.2E-33 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 SUPERFAMILY SSF52833 13 124 4.65E-31 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0407 54848df8a8038233b01f3c7fef48d684 296 PANTHER PTHR10438:SF288 5 146 6.5E-74 T 21-04-2016 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 SUPERFAMILY SSF48452 130 251 4.02E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0407 54848df8a8038233b01f3c7fef48d684 296 Pfam PF14561 Tetratricopeptide repeat 207 296 2.5E-28 T 21-04-2016 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 PANTHER PTHR23133 6 185 5.2E-73 T 21-04-2016 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 Pfam PF13242 HAD-hyrolase-like 109 179 4.5E-13 T 21-04-2016 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 153 1.6E-37 T 21-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 6.0E-101 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 SUPERFAMILY SSF56784 3 185 1.33E-53 T 21-04-2016 IPR023214 HAD-like domain SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 PANTHER PTHR23133:SF3 6 185 5.2E-73 T 21-04-2016 SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 Gene3D G3DSA:3.40.50.1000 3 183 3.4E-63 T 21-04-2016 IPR023214 HAD-like domain SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 1.1E-38 T 21-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SDY_0219 7f5fe36723d1198c71f7278eb20bf619 190 PIRSF PIRSF004682 1 189 1.5E-66 T 21-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 PANTHER PTHR30400:SF0 1 242 7.3E-123 T 21-04-2016 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 44.108 T 21-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 Gene3D G3DSA:1.10.3810.10 62 231 7.9E-62 T 21-04-2016 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 Pfam PF00912 Transglycosylase 60 227 4.1E-52 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 SUPERFAMILY SSF53955 51 231 8.44E-63 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 PANTHER PTHR30400 1 242 7.3E-123 T 21-04-2016 SDY_3389 fd61eb6c3fd488beff43c0c53a7f8c3b 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 231 2.8E-87 T 21-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 SDY_4470 6b755ab9a81fb645108e468e91075712 278 Gene3D G3DSA:3.30.420.10 102 260 9.4E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4470 6b755ab9a81fb645108e468e91075712 278 SUPERFAMILY SSF53098 100 262 6.7E-43 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4470 6b755ab9a81fb645108e468e91075712 278 Pfam PF00665 Integrase core domain 107 222 4.4E-33 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4470 6b755ab9a81fb645108e468e91075712 278 PANTHER PTHR32552 10 268 6.5E-72 T 21-04-2016 SDY_1657 be9823a47b75eac36a48d08377cb86ba 225 Gene3D G3DSA:2.60.40.1090 9 103 1.7E-36 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_1657 be9823a47b75eac36a48d08377cb86ba 225 Pfam PF09160 FimH, mannose binding 12 92 6.2E-32 T 21-04-2016 IPR015243 FimH, mannose-binding SDY_1657 be9823a47b75eac36a48d08377cb86ba 225 SUPERFAMILY SSF49401 105 225 1.09E-23 T 21-04-2016 IPR008966 Adhesion domain SDY_1657 be9823a47b75eac36a48d08377cb86ba 225 SUPERFAMILY SSF49401 13 103 2.78E-33 T 21-04-2016 IPR008966 Adhesion domain SDY_1657 be9823a47b75eac36a48d08377cb86ba 225 Gene3D G3DSA:2.60.40.1090 104 225 8.2E-32 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_3067 5bdaec02fb5a7e801d2c81806ddbaf51 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 9.1E-104 T 21-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 SDY_3067 5bdaec02fb5a7e801d2c81806ddbaf51 244 PANTHER PTHR30572 3 227 3.4E-94 T 21-04-2016 SDY_3067 5bdaec02fb5a7e801d2c81806ddbaf51 244 PANTHER PTHR30572:SF11 3 227 3.4E-94 T 21-04-2016 SDY_3067 5bdaec02fb5a7e801d2c81806ddbaf51 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 205 5.2E-35 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SDY_1263 03faa04720edb20d54e05517ad4fbb92 269 SUPERFAMILY SSF48452 191 258 6.72E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1263 03faa04720edb20d54e05517ad4fbb92 269 PANTHER PTHR31350 24 261 2.8E-53 T 21-04-2016 SDY_1263 03faa04720edb20d54e05517ad4fbb92 269 Gene3D G3DSA:1.25.40.10 188 258 1.7E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1263 03faa04720edb20d54e05517ad4fbb92 269 Pfam PF13371 Tetratricopeptide repeat 187 259 8.4E-27 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1263 03faa04720edb20d54e05517ad4fbb92 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.0E-38 T 21-04-2016 IPR032698 Protein SirB1, N-terminal SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 Gene3D G3DSA:3.40.50.10490 4 249 2.6E-83 T 21-04-2016 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 PANTHER PTHR10088 1 296 2.8E-149 T 21-04-2016 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 42.101 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 21-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 9.1E-155 T 21-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 SUPERFAMILY SSF53697 6 249 3.11E-65 T 21-04-2016 SDY_2624 3465a4dd09bf4fe1ff129641ba41c72c 298 Pfam PF01380 SIS domain 129 208 8.6E-9 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_2198 123323ba878c5b58ca5e7ddfaa58b3d6 617 Pfam PF05170 AsmA family 227 511 8.8E-23 T 21-04-2016 IPR007844 AsmA SDY_2198 123323ba878c5b58ca5e7ddfaa58b3d6 617 PANTHER PTHR30441:SF4 1 615 5.1E-243 T 21-04-2016 SDY_2198 123323ba878c5b58ca5e7ddfaa58b3d6 617 PANTHER PTHR30441 1 615 5.1E-243 T 21-04-2016 SDY_3709 eab3a90241c214e325f90cd73643a177 274 SMART SM00047 127 256 9.6E-42 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SDY_3709 eab3a90241c214e325f90cd73643a177 274 PANTHER PTHR40572 8 274 4.9E-96 T 21-04-2016 SDY_3709 eab3a90241c214e325f90cd73643a177 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 2.0E-16 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SDY_1256 55b665c7de7d2354089745562edafe6c 315 SMART SM01400 4 121 5.7E-76 T 21-04-2016 SDY_1256 55b665c7de7d2354089745562edafe6c 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 21-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SDY_1256 55b665c7de7d2354089745562edafe6c 315 SUPERFAMILY SSF53271 69 306 5.83E-67 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_1256 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 160 285 2.5E-52 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_1256 55b665c7de7d2354089745562edafe6c 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 21-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SDY_1256 55b665c7de7d2354089745562edafe6c 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.757 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SDY_1256 55b665c7de7d2354089745562edafe6c 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.7E-127 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SDY_1256 55b665c7de7d2354089745562edafe6c 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 21-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SDY_1256 55b665c7de7d2354089745562edafe6c 315 PANTHER PTHR10210:SF41 2 315 4.0E-189 T 21-04-2016 SDY_1256 55b665c7de7d2354089745562edafe6c 315 PANTHER PTHR10210 2 315 4.0E-189 T 21-04-2016 SDY_1256 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 2 159 3.7E-72 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_3263 12ee5a295203714f78cdb58a7ab69f98 783 Pfam PF01204 Trehalase 414 762 5.0E-11 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_3263 12ee5a295203714f78cdb58a7ab69f98 783 PANTHER PTHR23403 415 525 2.8E-42 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_3263 12ee5a295203714f78cdb58a7ab69f98 783 PANTHER PTHR23403 547 761 2.8E-42 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_3263 12ee5a295203714f78cdb58a7ab69f98 783 SUPERFAMILY SSF48208 558 779 2.86E-83 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SDY_3263 12ee5a295203714f78cdb58a7ab69f98 783 SUPERFAMILY SSF48208 270 530 2.86E-83 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 PIRSF PIRSF000379 55 810 1.2E-200 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 PANTHER PTHR30191:SF6 6 810 0.0 T 21-04-2016 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 Pfam PF01228 Glycine radical 688 791 7.7E-30 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 Gene3D G3DSA:3.20.70.20 8 808 1.4E-269 T 21-04-2016 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 PANTHER PTHR30191 6 810 0.0 T 21-04-2016 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 3.1E-214 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 21-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 SUPERFAMILY SSF51998 7 808 1.59E-233 T 21-04-2016 SDY_0764 6dd698e1c7f81b0ba215c1483fdfa770 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_2922 9d3004aa1fb10398c95f61b8696bf0e0 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 6.4E-75 T 21-04-2016 IPR021285 Transcription regulator, HycA SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 Gene3D G3DSA:3.30.70.20 42 78 8.9E-6 T 21-04-2016 SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 PANTHER PTHR10617:SF112 1 82 5.8E-62 T 21-04-2016 SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 PIRSF PIRSF036548 3 97 3.0E-37 T 21-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 SUPERFAMILY SSF54862 42 91 2.63E-8 T 21-04-2016 SDY_1792 38305fff2e6a90432e8e216609ddc3b2 97 PANTHER PTHR10617 1 82 5.8E-62 T 21-04-2016 SDY_3057 bf57747f5398e5f3122cca726083601b 227 Gene3D G3DSA:3.40.50.1860 1 113 5.1E-45 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 226 1.7E-59 T 21-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 SDY_3057 bf57747f5398e5f3122cca726083601b 227 Gene3D G3DSA:3.40.50.1860 114 213 3.8E-29 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 PANTHER PTHR21198:SF7 1 225 1.0E-93 T 21-04-2016 SDY_3057 bf57747f5398e5f3122cca726083601b 227 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 221 1.9E-52 T 21-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 SUPERFAMILY SSF53681 119 226 9.81E-27 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 SUPERFAMILY SSF53681 1 114 4.14E-36 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 21-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3057 bf57747f5398e5f3122cca726083601b 227 PANTHER PTHR21198 1 225 1.0E-93 T 21-04-2016 SDY_3057 bf57747f5398e5f3122cca726083601b 227 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 190 200 - T 21-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 SUPERFAMILY SSF52172 2 188 9.11E-42 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3834 893a3274dc45ef91b256983a83c8b153 232 SMART SM00448 2 111 1.2E-45 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 Gene3D G3DSA:1.10.10.10 130 229 1.0E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3834 893a3274dc45ef91b256983a83c8b153 232 PANTHER PTHR26402 2 231 7.5E-82 T 21-04-2016 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.5E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 SMART SM00862 152 228 9.7E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 PANTHER PTHR26402:SF117 2 231 7.5E-82 T 21-04-2016 SDY_3834 893a3274dc45ef91b256983a83c8b153 232 Gene3D G3DSA:3.40.50.2300 2 126 3.6E-41 T 21-04-2016 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 SMART SM01210 330 424 1.5E-55 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 SUPERFAMILY SSF52440 1 103 1.29E-37 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Gene3D G3DSA:3.30.470.20 191 328 4.0E-65 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 21-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 SUPERFAMILY SSF51246 329 424 2.9E-33 T 21-04-2016 IPR011054 Rudiment single hybrid motif SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 PANTHER PTHR10520 1 427 1.2E-299 T 21-04-2016 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 SUPERFAMILY SSF56059 104 325 5.83E-70 T 21-04-2016 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.2E-36 T 21-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.2E-83 T 21-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Gene3D G3DSA:3.30.1490.20 121 190 7.2E-34 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 2.4E-29 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Gene3D G3DSA:3.40.50.20 2 95 1.2E-38 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 SMART SM01209 103 296 1.1E-142 T 21-04-2016 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.992 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 3.5E-190 T 21-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3721 71f4afe9b96a0564f1911276adf605c6 429 Gene3D G3DSA:3.90.600.10 331 424 1.2E-35 T 21-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 SUPERFAMILY SSF55821 7 213 5.04E-86 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 PANTHER PTHR21327:SF15 1 215 2.3E-164 T 21-04-2016 SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 PANTHER PTHR21327 1 215 2.3E-164 T 21-04-2016 SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.303 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 Gene3D G3DSA:3.90.870.10 10 214 4.2E-95 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.1E-86 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_3226 7a0ee251aebd17f34ee42e9d84f7869d 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 9.0E-83 T 21-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 9.0E-46 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 Pfam PF01386 Ribosomal L25p family 4 91 2.3E-25 T 21-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 SUPERFAMILY SSF50715 1 93 7.32E-32 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 Gene3D G3DSA:2.40.240.10 1 93 4.0E-36 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.446 T 21-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SDY_0894 f4f08edd306f448c81f9dd6169c602a6 94 PANTHER PTHR33284 1 94 3.1E-42 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.309.10 309 404 3.9E-30 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.309.10 214 273 3.9E-30 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 5.8E-114 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.605.10 4 206 4.4E-25 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:1.20.1090.10 644 864 1.7E-68 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Pfam PF00171 Aldehyde dehydrogenase family 5 400 8.4E-29 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 PANTHER PTHR11496:SF79 360 867 0.0 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 PIRSF PIRSF000111 1 866 0.0 T 21-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.50.1970 450 643 6.5E-63 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 SUPERFAMILY SSF56796 449 867 4.58E-119 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 PANTHER PTHR11496 360 867 0.0 T 21-04-2016 SDY_1295 74428bf03d3c75c944ea0b2eb632701f 891 SUPERFAMILY SSF53720 6 453 2.62E-85 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 1.1E-60 T 21-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 PANTHER PTHR11715 1 129 8.7E-76 T 21-04-2016 IPR002930 Glycine cleavage system H-protein SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.2E-49 T 21-04-2016 IPR002930 Glycine cleavage system H-protein SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 PANTHER PTHR11715:SF12 1 129 8.7E-76 T 21-04-2016 SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 Gene3D G3DSA:2.40.50.100 7 128 1.2E-51 T 21-04-2016 SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.268 T 21-04-2016 IPR002930 Glycine cleavage system H-protein SDY_3177 8011239fd9d51746b3a12fd7b4dd993f 129 SUPERFAMILY SSF51230 4 128 9.79E-46 T 21-04-2016 IPR011053 Single hybrid motif SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 SUPERFAMILY SSF53850 28 528 1.57E-132 T 21-04-2016 SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 453 6.6E-78 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 PANTHER PTHR30290 1 533 3.1E-180 T 21-04-2016 SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 Gene3D G3DSA:3.10.105.10 292 503 8.4E-60 T 21-04-2016 SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 Gene3D G3DSA:3.90.76.10 42 217 7.8E-50 T 21-04-2016 SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 PANTHER PTHR30290:SF10 1 533 3.1E-180 T 21-04-2016 SDY_3217 c4848ba54f5cb3c884463841916a95f7 535 PIRSF PIRSF002741 4 535 4.4E-102 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_2199 214cd4246a86f39d498b8edff441c6ef 96 SMART SM00530 32 88 0.0018 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2199 214cd4246a86f39d498b8edff441c6ef 96 Pfam PF13744 Helix-turn-helix domain 14 86 2.7E-20 T 21-04-2016 SDY_2199 214cd4246a86f39d498b8edff441c6ef 96 SUPERFAMILY SSF47413 19 87 5.9E-18 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2199 214cd4246a86f39d498b8edff441c6ef 96 Gene3D G3DSA:1.10.260.40 19 82 2.2E-28 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4136 f676dcea6ace48858439da9f603284e5 264 Pfam PF02369 Bacterial Ig-like domain (group 1) 182 262 1.1E-12 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4136 f676dcea6ace48858439da9f603284e5 264 Gene3D G3DSA:2.60.40.920 171 263 8.4E-17 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4136 f676dcea6ace48858439da9f603284e5 264 Gene3D G3DSA:2.60.40.920 73 150 1.0E-12 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4136 f676dcea6ace48858439da9f603284e5 264 SUPERFAMILY SSF49373 73 146 6.28E-9 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_4136 f676dcea6ace48858439da9f603284e5 264 SUPERFAMILY SSF49373 170 263 3.92E-15 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_4136 f676dcea6ace48858439da9f603284e5 264 SMART SM00634 73 164 0.81 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4136 f676dcea6ace48858439da9f603284e5 264 SMART SM00634 178 264 1.9E-13 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_0003 76c455e312bbc25a609543bc830a44a2 310 TIGRFAM TIGR00191 thrB: homoserine kinase 2 309 1.3E-122 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.70.890 169 298 6.3E-41 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0003 76c455e312bbc25a609543bc830a44a2 310 Pfam PF00288 GHMP kinases N terminal domain 85 150 7.1E-14 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 Pfam PF08544 GHMP kinases C terminal 212 281 6.6E-10 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PIRSF PIRSF000676 1 310 4.1E-87 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.230.10 1 164 2.6E-51 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_0003 76c455e312bbc25a609543bc830a44a2 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 21-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF55060 172 289 2.88E-33 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PANTHER PTHR20861:SF1 1 310 4.4E-132 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PANTHER PTHR20861 1 310 4.4E-132 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF54211 1 162 2.2E-32 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 9 24 3.7E-34 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 137 150 3.7E-34 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 254 269 3.7E-34 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 175 192 3.7E-34 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 97 112 3.7E-34 T 21-04-2016 SDY_0003 76c455e312bbc25a609543bc830a44a2 310 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 31.0 T 21-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PANTHER PTHR11757 2 683 0.0 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 2.7E-54 T 21-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 SUPERFAMILY SSF53474 414 655 4.63E-44 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 4.6E-116 T 21-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 PANTHER PTHR11757:SF3 2 683 0.0 T 21-04-2016 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 SUPERFAMILY SSF50993 2 408 3.4E-81 T 21-04-2016 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 Gene3D G3DSA:3.40.50.1820 416 644 1.7E-35 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 Gene3D G3DSA:2.130.10.120 73 407 2.9E-96 T 21-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 Pfam PF00326 Prolyl oligopeptidase family 463 676 4.9E-69 T 21-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SDY_1131 2d9acc8013716d70a1f66f77430cbb32 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 21-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 8.2E-83 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 SUPERFAMILY SSF64158 79 310 3.14E-85 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Gene3D G3DSA:3.40.1450.10 80 310 2.6E-98 T 21-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 PANTHER PTHR31637:SF0 1 514 5.5E-295 T 21-04-2016 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 PANTHER PTHR31637 1 514 5.5E-295 T 21-04-2016 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.857 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Gene3D G3DSA:3.40.720.10 315 510 1.5E-88 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Gene3D G3DSA:3.40.720.10 5 79 1.5E-88 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 8.9E-246 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 SUPERFAMILY SSF53649 311 510 2.22E-74 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 SUPERFAMILY SSF53649 5 79 2.22E-74 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 PIRSF PIRSF001492 1 514 1.5E-205 T 21-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_4045 2d2f3f06785bbab878c003112e63106a 514 Pfam PF01676 Metalloenzyme superfamily 6 500 2.9E-84 T 21-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SDY_2633 6a05fdc9976726584a97156149a29229 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 1.6E-51 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_2633 6a05fdc9976726584a97156149a29229 289 SUPERFAMILY SSF53187 200 277 7.85E-55 T 21-04-2016 SDY_2633 6a05fdc9976726584a97156149a29229 289 SUPERFAMILY SSF53187 57 152 7.85E-55 T 21-04-2016 SDY_2633 6a05fdc9976726584a97156149a29229 289 PANTHER PTHR30404 29 283 2.9E-216 T 21-04-2016 SDY_2633 6a05fdc9976726584a97156149a29229 289 SMART SM00646 118 273 4.0E-66 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_2633 6a05fdc9976726584a97156149a29229 289 Gene3D G3DSA:3.40.630.40 57 153 4.0E-59 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_2633 6a05fdc9976726584a97156149a29229 289 Gene3D G3DSA:3.40.630.40 201 277 4.0E-59 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_2633 6a05fdc9976726584a97156149a29229 289 PANTHER PTHR30404:SF2 29 283 2.9E-216 T 21-04-2016 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 SUPERFAMILY SSF51690 131 296 9.81E-60 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 3.5E-104 T 21-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 4.1E-63 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 2.4E-23 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 PANTHER PTHR32179 1 297 2.2E-129 T 21-04-2016 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 PIRSF PIRSF006250 17 297 9.8E-115 T 21-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SDY_0139 e49067dced21df203d3834cd09dfea6a 297 Gene3D G3DSA:3.90.1170.20 20 151 1.8E-46 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 SUPERFAMILY SSF54675 14 130 9.89E-32 T 21-04-2016 SDY_0139 e49067dced21df203d3834cd09dfea6a 297 Gene3D G3DSA:3.20.20.70 152 285 8.4E-60 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 SUPERFAMILY SSF140990 402 602 3.79E-73 T 21-04-2016 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.7E-248 T 21-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 SUPERFAMILY SSF52540 141 391 7.38E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 37.49 T 21-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Gene3D G3DSA:1.10.8.60 332 406 5.6E-29 T 21-04-2016 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Gene3D G3DSA:3.40.50.300 144 331 2.9E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Pfam PF01434 Peptidase family M41 382 591 8.2E-83 T 21-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 21-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 SMART SM00382 184 323 1.9E-26 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 PANTHER PTHR23076 1 629 0.0 T 21-04-2016 SDY_3359 4300bd417ad2fece328021e9e2eb880f 644 Pfam PF06480 FtsH Extracellular 5 93 2.9E-16 T 21-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SDY_3424 5d91b83808294d6fe31e82623b92e4a1 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 3.4E-42 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SDY_3424 5d91b83808294d6fe31e82623b92e4a1 162 PIRSF PIRSF018472 2 162 9.3E-58 T 21-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type SDY_3424 5d91b83808294d6fe31e82623b92e4a1 162 PANTHER PTHR37484 1 162 7.4E-74 T 21-04-2016 SDY_3424 5d91b83808294d6fe31e82623b92e4a1 162 Pfam PF04093 rod shape-determining protein MreD 5 155 3.0E-46 T 21-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 PANTHER PTHR12526:SF220 1 352 2.2E-137 T 21-04-2016 SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 9.6E-8 T 21-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 Gene3D G3DSA:3.40.50.2000 154 349 3.4E-21 T 21-04-2016 SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 SUPERFAMILY SSF53756 3 354 2.74E-61 T 21-04-2016 SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 PANTHER PTHR12526 1 352 2.2E-137 T 21-04-2016 SDY_4061 fe92dcc4ac363ce8037bc987fff3a36b 374 Pfam PF00534 Glycosyl transferases group 1 183 350 6.1E-37 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.147 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 PANTHER PTHR33694 1 305 3.8E-148 T 21-04-2016 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.6E-164 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 134 278 3.34E-54 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 8.1E-109 T 21-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.230.20 3 124 1.7E-45 T 21-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.1700.10 129 283 3.0E-63 T 21-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 PANTHER PTHR33694:SF1 1 305 3.8E-148 T 21-04-2016 SDY_0126 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 3 124 1.29E-41 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.69 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 SUPERFAMILY SSF53098 3 156 1.87E-56 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 21-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.1E-69 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.8E-88 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 21-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 PANTHER PTHR30194 1 169 3.5E-73 T 21-04-2016 SDY_1150 539598d2fa64fa2ffaa2e499b33e63ab 173 Gene3D G3DSA:3.30.420.10 3 157 1.3E-67 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 PANTHER PTHR31793:SF9 6 134 2.8E-49 T 21-04-2016 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 2.0E-48 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 PIRSF PIRSF003230 1 134 2.2E-48 T 21-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 SUPERFAMILY SSF54637 4 133 7.48E-38 T 21-04-2016 IPR029069 HotDog domain SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 Pfam PF03061 Thioesterase superfamily 20 103 4.8E-16 T 21-04-2016 IPR006683 Thioesterase domain SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 PANTHER PTHR31793 6 134 2.8E-49 T 21-04-2016 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 Gene3D G3DSA:3.10.129.10 4 133 1.1E-46 T 21-04-2016 IPR029069 HotDog domain SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 21-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SDY_0684 f0de7a5d94e97d4f5f43a34b3e8d7e52 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.2E-49 T 21-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 414 43.291 T 21-04-2016 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 Pfam PF05977 Transmembrane secretion effector 16 405 7.0E-20 T 21-04-2016 IPR010290 Transmembrane secretion effector SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 Gene3D G3DSA:1.20.1250.20 16 206 7.8E-21 T 21-04-2016 SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 PANTHER PTHR23513:SF9 1 410 2.6E-139 T 21-04-2016 SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 Gene3D G3DSA:1.20.1250.20 239 402 1.0E-11 T 21-04-2016 SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 PANTHER PTHR23513 1 410 2.6E-139 T 21-04-2016 SDY_0522 f6e6f873f60e975168799dcb03af4da4 416 SUPERFAMILY SSF103473 16 403 8.89E-40 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3375 aebbf49a3e896e2eef426cb630050b72 260 PANTHER PTHR30188 1 260 2.4E-125 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SDY_3375 aebbf49a3e896e2eef426cb630050b72 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 7.7E-107 T 21-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SDY_3375 aebbf49a3e896e2eef426cb630050b72 260 PANTHER PTHR30188:SF4 1 260 2.4E-125 T 21-04-2016 SDY_3375 aebbf49a3e896e2eef426cb630050b72 260 Pfam PF02405 Permease MlaE 44 256 4.7E-73 T 21-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PANTHER PTHR11958 7 427 7.4E-271 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 5.7E-115 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PANTHER PTHR11958:SF49 7 427 7.4E-271 T 21-04-2016 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 Gene3D G3DSA:1.10.3860.10 6 406 1.9E-120 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 SUPERFAMILY SSF118215 9 401 6.41E-122 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 21-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.1E-37 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.14 T 21-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 SDY_4548 4deadf220e3e9f9aa713054ec0c5a454 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 21-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 SDY_3563 2beadc5164b67220edde6841b2bad841 280 PANTHER PTHR37426:SF1 2 280 4.4E-168 T 21-04-2016 SDY_3563 2beadc5164b67220edde6841b2bad841 280 SUPERFAMILY SSF53335 9 279 8.0E-100 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3563 2beadc5164b67220edde6841b2bad841 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 6.2E-119 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SDY_3563 2beadc5164b67220edde6841b2bad841 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3563 2beadc5164b67220edde6841b2bad841 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3563 2beadc5164b67220edde6841b2bad841 280 Gene3D G3DSA:3.40.50.150 1 280 1.7E-120 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3563 2beadc5164b67220edde6841b2bad841 280 PANTHER PTHR37426 2 280 4.4E-168 T 21-04-2016 SDY_3563 2beadc5164b67220edde6841b2bad841 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.934 T 21-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 SDY_0626 d840bf9ea85caa98f05d63d2ec229980 254 PANTHER PTHR10992 1 254 2.6E-78 T 21-04-2016 SDY_0626 d840bf9ea85caa98f05d63d2ec229980 254 Pfam PF12697 Alpha/beta hydrolase family 19 246 1.1E-18 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0626 d840bf9ea85caa98f05d63d2ec229980 254 Gene3D G3DSA:3.40.50.1820 4 253 1.7E-46 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0626 d840bf9ea85caa98f05d63d2ec229980 254 SUPERFAMILY SSF53474 12 253 8.38E-49 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0626 d840bf9ea85caa98f05d63d2ec229980 254 PANTHER PTHR10992:SF768 1 254 2.6E-78 T 21-04-2016 SDY_1197 e4ff694949b052dd3df8cca4fae3e9c0 256 Gene3D G3DSA:3.30.420.10 66 226 1.1E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1197 e4ff694949b052dd3df8cca4fae3e9c0 256 Pfam PF00665 Integrase core domain 72 186 2.4E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1197 e4ff694949b052dd3df8cca4fae3e9c0 256 SUPERFAMILY SSF53098 65 229 1.52E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1197 e4ff694949b052dd3df8cca4fae3e9c0 256 PANTHER PTHR32552 2 235 1.4E-63 T 21-04-2016 SDY_1197 e4ff694949b052dd3df8cca4fae3e9c0 256 Pfam PF13276 HTH-like domain 5 47 8.1E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 4.9E-153 T 21-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 Gene3D G3DSA:3.50.30.20 4 146 2.3E-63 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 SMART SM01097 3 133 3.4E-90 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.5E-50 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.715 T 21-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 PANTHER PTHR11405 3 379 2.9E-257 T 21-04-2016 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 Gene3D G3DSA:3.40.50.880 154 378 3.7E-86 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 SUPERFAMILY SSF52021 3 143 2.88E-57 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.0E-52 T 21-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SDY_0054 811fd162eba2ce5db5f1e4585763fbc9 382 SUPERFAMILY SSF52317 153 378 1.68E-64 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 Pfam PF00005 ABC transporter 18 157 5.1E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 8.3E-119 T 21-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 Gene3D G3DSA:3.40.50.300 17 224 9.3E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 PANTHER PTHR24220 1 219 5.4E-106 T 21-04-2016 SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 SUPERFAMILY SSF52540 1 223 5.06E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 SMART SM00382 24 209 4.6E-20 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0093 a93c54da751b7ed71940cfe5689dfdab 232 PANTHER PTHR24220:SF439 1 219 5.4E-106 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:3.90.800.10 101 209 1.5E-47 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.941 T 21-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 0.0 T 21-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 SUPERFAMILY SSF52374 10 337 3.1E-103 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:1.10.1160.10 263 338 6.2E-39 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 8.8E-128 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.4E-63 T 21-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 SUPERFAMILY SSF50715 340 547 6.8E-81 T 21-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:3.40.50.620 212 262 4.0E-43 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:3.40.50.620 27 96 4.0E-43 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PANTHER PTHR11451 7 247 6.7E-244 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PANTHER PTHR11451 267 551 6.7E-244 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PANTHER PTHR11451:SF29 7 247 6.7E-244 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 PANTHER PTHR11451:SF29 267 551 6.7E-244 T 21-04-2016 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:2.40.240.10 462 547 4.6E-35 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SDY_0614 c2d700b66b99b44605df4aec4bfbe785 554 Gene3D G3DSA:2.40.240.10 348 461 1.1E-49 T 21-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 PANTHER PTHR31690:SF6 1 140 1.4E-63 T 21-04-2016 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 48.785 T 21-04-2016 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 UniPathway: UPA00956 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 Pfam PF05025 RbsD / FucU transport protein family 4 139 9.6E-35 T 21-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 PANTHER PTHR31690 1 140 1.4E-63 T 21-04-2016 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 SUPERFAMILY SSF102546 1 139 1.96E-38 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 SDY_3022 05793d33afddf98c3a809ef19fa95319 140 Gene3D G3DSA:3.40.1650.10 1 139 8.4E-50 T 21-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 SDY_0392 ddf54e2a1876bd2de0b1097122664d99 117 SUPERFAMILY SSF54909 1 116 1.2E-53 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_0392 ddf54e2a1876bd2de0b1097122664d99 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 2.5E-47 T 21-04-2016 IPR009874 Protein of unknown function DUF1428 SDY_0392 ddf54e2a1876bd2de0b1097122664d99 117 PIRSF PIRSF007028 1 117 2.6E-56 T 21-04-2016 IPR009874 Protein of unknown function DUF1428 SDY_0392 ddf54e2a1876bd2de0b1097122664d99 117 Gene3D G3DSA:3.30.70.900 1 116 2.3E-57 T 21-04-2016 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 PANTHER PTHR20941 1 148 3.6E-78 T 21-04-2016 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 Gene3D G3DSA:3.30.70.560 3 151 4.2E-58 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.8E-47 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.2E-36 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_0158 17560e90873f8e57a74350fe4b5c8acc 159 SUPERFAMILY SSF55083 1 154 2.22E-54 T 21-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_1276 388365decac83eae24683bfee3967190 598 SUPERFAMILY SSF158472 178 225 2.09E-5 T 21-04-2016 SDY_1276 388365decac83eae24683bfee3967190 598 PIRSF PIRSF003167 1 597 1.4E-196 T 21-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 SDY_1276 388365decac83eae24683bfee3967190 598 Pfam PF07730 Histidine kinase 390 453 7.0E-19 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SDY_1276 388365decac83eae24683bfee3967190 598 PANTHER PTHR24421:SF12 87 583 2.5E-226 T 21-04-2016 SDY_1276 388365decac83eae24683bfee3967190 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 130 1.6E-9 T 21-04-2016 IPR029095 NarX-like, N-terminal SDY_1276 388365decac83eae24683bfee3967190 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 583 3.8E-11 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1276 388365decac83eae24683bfee3967190 598 PANTHER PTHR24421 87 583 2.5E-226 T 21-04-2016 SDY_1276 388365decac83eae24683bfee3967190 598 SMART SM00387 494 587 9.4E-15 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1276 388365decac83eae24683bfee3967190 598 SUPERFAMILY SSF55874 467 583 2.62E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_1276 388365decac83eae24683bfee3967190 598 Pfam PF00672 HAMP domain 160 224 8.1E-11 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_1276 388365decac83eae24683bfee3967190 598 SMART SM00304 176 228 1.4E-10 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_1276 388365decac83eae24683bfee3967190 598 Gene3D G3DSA:3.30.565.10 447 583 1.4E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3538 a52676fa657ff76a30e279898ff8c409 384 Gene3D G3DSA:2.40.50.100 168 202 3.1E-21 T 21-04-2016 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 Gene3D G3DSA:2.40.50.100 60 93 3.1E-21 T 21-04-2016 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 PANTHER PTHR30158 3 380 2.7E-187 T 21-04-2016 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 288 1.1E-16 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_3538 a52676fa657ff76a30e279898ff8c409 384 SUPERFAMILY SSF111369 49 295 8.37E-81 T 21-04-2016 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 9.5E-80 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 Pfam PF00529 HlyD membrane-fusion protein of T1SS 34 355 1.3E-9 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_3538 a52676fa657ff76a30e279898ff8c409 384 PANTHER PTHR30158:SF3 3 380 2.7E-187 T 21-04-2016 SDY_2996 d196eab62d33c61927f63166a310bad3 432 SMART SM01192 143 430 1.3E-215 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 Pfam PF03952 Enolase, N-terminal domain 4 134 5.7E-59 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PANTHER PTHR11902 1 427 6.6E-279 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 PIRSF PIRSF001400 1 430 4.0E-194 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF51604 143 427 9.34E-129 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_2996 d196eab62d33c61927f63166a310bad3 432 Hamap MF_00318 Enolase [eno]. 2 416 44.545 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 21-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 6.0E-143 T 21-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 SMART SM01193 4 134 2.6E-94 T 21-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.20.20.120 128 429 3.0E-138 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_2996 d196eab62d33c61927f63166a310bad3 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 8.8E-207 T 21-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SDY_2996 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.30.390.10 3 127 2.1E-55 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_2996 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF54826 3 138 3.71E-57 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PANTHER PTHR22912 1 461 3.2E-299 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PIRSF PIRSF000350 2 463 7.7E-69 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.3E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.7E-30 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 70.118 T 21-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.4E-25 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.4E-25 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 9.4E-25 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.4E-25 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.4E-25 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-49 T 21-04-2016 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 SUPERFAMILY SSF51905 5 335 1.47E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 21-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 21-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Gene3D G3DSA:3.50.50.60 6 150 1.3E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Gene3D G3DSA:3.50.50.60 279 338 1.3E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 Gene3D G3DSA:3.50.50.60 157 278 1.7E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3797 063d12b9b61d8ae850f44c2dac9c12b0 466 PANTHER PTHR22912:SF93 1 461 3.2E-299 T 21-04-2016 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 Pfam PF00654 Voltage gated chloride channel 89 437 5.4E-89 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 Gene3D G3DSA:1.10.3080.10 26 452 5.6E-101 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 102 119 3.1E-28 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 405 424 3.1E-28 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 387 403 3.1E-28 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 352 372 3.1E-28 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PRINTS PR00762 Chloride channel signature 183 202 3.1E-28 T 21-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PANTHER PTHR11689 8 451 5.1E-213 T 21-04-2016 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.995 T 21-04-2016 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 SUPERFAMILY SSF81340 15 453 1.96E-111 T 21-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SDY_0171 97c1ffd44b4760afc957e6181cb543b1 473 PANTHER PTHR11689:SF96 8 451 5.1E-213 T 21-04-2016 SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 Pfam PF03969 AFG1-like ATPase 4 371 4.0E-170 T 21-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 PANTHER PTHR12169 1 373 1.1E-212 T 21-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.784 T 21-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 Gene3D G3DSA:3.40.50.300 37 184 4.0E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 SUPERFAMILY SSF52540 69 208 2.09E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3408 f2c8ea8d98980091d18a3c6032820dba 375 PANTHER PTHR12169:SF11 1 373 1.1E-212 T 21-04-2016 SDY_0092 96e6a4c779d5bf51c9884d42a7c80172 254 PANTHER PTHR30353 1 252 8.1E-193 T 21-04-2016 IPR032818 DedA family SDY_0092 96e6a4c779d5bf51c9884d42a7c80172 254 PANTHER PTHR30353:SF7 1 252 8.1E-193 T 21-04-2016 SDY_0092 96e6a4c779d5bf51c9884d42a7c80172 254 Pfam PF09335 SNARE associated Golgi protein 36 159 1.5E-18 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_0797 c1614b5775854f0b07bcc0f7894518ef 86 PANTHER PTHR34156:SF1 2 86 3.4E-50 T 21-04-2016 SDY_0797 c1614b5775854f0b07bcc0f7894518ef 86 SUPERFAMILY SSF159871 3 86 1.57E-24 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_0797 c1614b5775854f0b07bcc0f7894518ef 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 7.8E-16 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_0797 c1614b5775854f0b07bcc0f7894518ef 86 Gene3D G3DSA:3.30.1660.10 18 86 7.6E-27 T 21-04-2016 IPR025543 Dodecin-like SDY_0797 c1614b5775854f0b07bcc0f7894518ef 86 PANTHER PTHR34156 2 86 3.4E-50 T 21-04-2016 SDY_1948 bbf91b1b3c513b05e46a9801dfacba95 288 Pfam PF00324 Amino acid permease 45 283 2.1E-29 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_1948 bbf91b1b3c513b05e46a9801dfacba95 288 PANTHER PTHR11785:SF55 8 288 2.2E-203 T 21-04-2016 SDY_1948 bbf91b1b3c513b05e46a9801dfacba95 288 PANTHER PTHR11785 8 288 2.2E-203 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 8.6E-7 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 SUPERFAMILY SSF53623 13 284 1.83E-88 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 Pfam PF08245 Mur ligase middle domain 54 197 1.0E-9 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 SUPERFAMILY SSF53244 286 414 4.58E-34 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 21-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 Gene3D G3DSA:3.90.190.20 288 415 1.6E-46 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 Gene3D G3DSA:3.40.1190.10 13 284 2.4E-92 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 1.6E-114 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 PIRSF PIRSF001563 6 419 1.4E-108 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 PANTHER PTHR11136 16 420 1.7E-138 T 21-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 21-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SDY_2514 63c890eeba6f0df525d1d1e906d0cfc0 422 PANTHER PTHR11136:SF0 16 420 1.7E-138 T 21-04-2016 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 SUPERFAMILY SSF47413 14 83 9.65E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 Pfam PF13413 Helix-turn-helix domain 18 78 5.1E-15 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 PANTHER PTHR34475 2 337 4.2E-66 T 21-04-2016 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 Gene3D G3DSA:1.10.260.40 6 86 1.0E-14 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 SMART SM00530 18 79 2.2E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 PANTHER PTHR34475:SF1 2 337 4.2E-66 T 21-04-2016 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 Pfam PF13464 Domain of unknown function (DUF4115) 255 329 9.3E-24 T 21-04-2016 IPR025194 Domain of unknown function DUF4115 SDY_2712 4fb4fd1cd273f1585c61f9bdd85ca3be 337 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 332 45.656 T 21-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 SDY_2015 ebedea6ee71893d365032b5742f1cf7d 107 Hamap MF_01199 Anti-adapter protein IraM [iraM]. 1 107 28.978 T 21-04-2016 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 SDY_2015 ebedea6ee71893d365032b5742f1cf7d 107 PIRSF PIRSF007036 1 107 6.0E-59 T 21-04-2016 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 SDY_1610 656807be916d8b5025c47586584f7e47 143 Pfam PF02566 OsmC-like protein 43 138 4.1E-19 T 21-04-2016 IPR003718 OsmC/Ohr family SDY_1610 656807be916d8b5025c47586584f7e47 143 Gene3D G3DSA:3.30.300.20 3 141 1.2E-52 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_1610 656807be916d8b5025c47586584f7e47 143 PANTHER PTHR33797 1 143 3.7E-65 T 21-04-2016 SDY_1610 656807be916d8b5025c47586584f7e47 143 PANTHER PTHR33797:SF1 1 143 3.7E-65 T 21-04-2016 SDY_1610 656807be916d8b5025c47586584f7e47 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 8.6E-60 T 21-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 SDY_1610 656807be916d8b5025c47586584f7e47 143 SUPERFAMILY SSF82784 1 141 6.94E-41 T 21-04-2016 IPR003718 OsmC/Ohr family SDY_2417 af544802eba7d5140f866cca4f1f31f1 136 SUPERFAMILY SSF103370 1 133 1.23E-46 T 21-04-2016 IPR008711 Recombinase NinB SDY_2417 af544802eba7d5140f866cca4f1f31f1 136 Pfam PF05772 NinB protein 1 131 1.9E-54 T 21-04-2016 IPR008711 Recombinase NinB SDY_2417 af544802eba7d5140f866cca4f1f31f1 136 Gene3D G3DSA:1.10.3790.10 1 134 8.2E-52 T 21-04-2016 IPR008711 Recombinase NinB SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 SMART SM00062 26 246 1.0E-73 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 Gene3D G3DSA:3.40.190.10 207 246 4.9E-48 T 21-04-2016 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 Gene3D G3DSA:3.40.190.10 25 102 4.9E-48 T 21-04-2016 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 PANTHER PTHR18966 25 248 4.7E-62 T 21-04-2016 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 SUPERFAMILY SSF53850 7 245 2.59E-74 T 21-04-2016 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.5E-70 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 Gene3D G3DSA:3.40.190.10 103 206 1.0E-32 T 21-04-2016 SDY_0785 d7431b2d9caebe7ad4757e38ef35f327 248 SMART SM00079 26 245 1.2E-7 T 21-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 Gene3D G3DSA:1.10.10.10 1 82 1.9E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.7E-22 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.33E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.33E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.33E-9 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 SUPERFAMILY SSF53850 89 296 1.21E-39 T 21-04-2016 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 Gene3D G3DSA:3.40.190.10 90 177 8.7E-27 T 21-04-2016 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 SUPERFAMILY SSF46785 4 89 5.53E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 PANTHER PTHR30346:SF7 1 292 2.2E-139 T 21-04-2016 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 Pfam PF03466 LysR substrate binding domain 88 296 1.6E-44 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 PANTHER PTHR30346 1 292 2.2E-139 T 21-04-2016 SDY_1561 13baa2a138de8a7b7082e6bf61df65c7 297 Gene3D G3DSA:3.40.190.10 178 270 2.0E-29 T 21-04-2016 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.1E-94 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.8E-42 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PANTHER PTHR11548 1 264 4.4E-201 T 21-04-2016 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 Gene3D G3DSA:3.30.572.10 1 264 7.7E-137 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.6E-47 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.6E-47 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.6E-47 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.6E-47 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.6E-47 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 SUPERFAMILY SSF55831 1 264 3.01E-132 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 21-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.34 T 21-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_3044 9c6c531d58ec663fe884cf861201e328 264 Pfam PF00303 Thymidylate synthase 2 264 2.7E-125 T 21-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 PANTHER PTHR30404 1 445 3.1E-259 T 21-04-2016 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 SMART SM00646 254 413 4.6E-76 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 SUPERFAMILY SSF53187 340 416 3.77E-53 T 21-04-2016 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 SUPERFAMILY SSF53187 192 288 3.77E-53 T 21-04-2016 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 194 413 1.2E-48 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 PANTHER PTHR30404:SF1 1 445 3.1E-259 T 21-04-2016 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 Gene3D G3DSA:3.40.630.40 341 416 9.1E-59 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_4420 bf8eb65a5a61f360fe6771f86608ab70 445 Gene3D G3DSA:3.40.630.40 192 289 9.1E-59 T 21-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SDY_2032 1ae207b797beafab2a756444838a7c0f 414 Pfam PF02687 FtsX-like permease family 274 407 6.6E-21 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SDY_2032 1ae207b797beafab2a756444838a7c0f 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 1.2E-166 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SDY_2032 1ae207b797beafab2a756444838a7c0f 414 PANTHER PTHR30489 3 414 2.2E-88 T 21-04-2016 SDY_2032 1ae207b797beafab2a756444838a7c0f 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 1.4E-15 T 21-04-2016 IPR025857 MacB-like periplasmic core domain SDY_2032 1ae207b797beafab2a756444838a7c0f 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 4.7E-236 T 21-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 SDY_2032 1ae207b797beafab2a756444838a7c0f 414 PANTHER PTHR30489:SF0 3 414 2.2E-88 T 21-04-2016 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 SUPERFAMILY SSF52317 3 195 7.91E-53 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.165 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 PIRSF PIRSF000495 1 196 2.5E-62 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 9.7E-75 T 21-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 21-04-2016 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 21-04-2016 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 Pfam PF00117 Glutamine amidotransferase class-I 7 194 1.6E-17 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 PANTHER PTHR21235 2 196 2.3E-90 T 21-04-2016 SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 Gene3D G3DSA:3.40.50.880 1 196 5.1E-70 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2218 238e25162c0a2ea5ef8b1029e602d964 196 PANTHER PTHR21235:SF1 2 196 2.3E-90 T 21-04-2016 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.30.565.10 15 218 1.7E-92 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.40.50.670 404 550 1.2E-101 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.40.50.670 718 786 1.2E-101 T 21-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Gene3D G3DSA:3.30.230.10 220 392 1.2E-78 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PANTHER PTHR10169 1 553 0.0 T 21-04-2016 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PANTHER PTHR10169 722 804 0.0 T 21-04-2016 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF01751 Toprim domain 419 531 4.0E-18 T 21-04-2016 IPR006171 Toprim domain SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-80 T 21-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 5.8E-71 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF54211 221 392 5.12E-62 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SMART SM00433 35 797 2.4E-283 T 21-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 6.7E-24 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 117.135 T 21-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 2.6E-30 T 21-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF56719 730 795 8.11E-87 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF56719 394 560 8.11E-87 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 Pfam PF00204 DNA gyrase B 221 390 2.8E-59 T 21-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 21-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SMART SM00387 31 175 2.6E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4181 955cda65d616cd2bc5d9ff4ebab37c60 804 SUPERFAMILY SSF55874 4 220 1.22E-77 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0520 550dbc8e472e53b6303008470df0e850 330 PANTHER PTHR30472 1 330 2.1E-172 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0520 550dbc8e472e53b6303008470df0e850 330 Gene3D G3DSA:1.10.3470.10 6 329 1.1E-90 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0520 550dbc8e472e53b6303008470df0e850 330 Pfam PF01032 FecCD transport family 19 324 1.4E-84 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0520 550dbc8e472e53b6303008470df0e850 330 SUPERFAMILY SSF81345 3 325 3.53E-72 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0520 550dbc8e472e53b6303008470df0e850 330 PANTHER PTHR30472:SF24 1 330 2.1E-172 T 21-04-2016 SDY_2452 8a1447240aa8874654d340274039e458 296 Gene3D G3DSA:3.20.20.370 13 38 1.0E-26 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SDY_2452 8a1447240aa8874654d340274039e458 296 Gene3D G3DSA:3.20.20.370 82 268 1.0E-26 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SDY_2452 8a1447240aa8874654d340274039e458 296 Pfam PF01522 Polysaccharide deacetylase 15 167 7.0E-13 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SDY_2452 8a1447240aa8874654d340274039e458 296 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 292 60.762 T 21-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 SDY_2452 8a1447240aa8874654d340274039e458 296 SUPERFAMILY SSF88713 81 267 1.39E-27 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SDY_2452 8a1447240aa8874654d340274039e458 296 SUPERFAMILY SSF88713 14 41 1.39E-27 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SDY_3148 1e7c2d75e7738b29e868fd22bab05370 237 PANTHER PTHR10285 19 218 1.1E-46 T 21-04-2016 SDY_3148 1e7c2d75e7738b29e868fd22bab05370 237 SUPERFAMILY SSF52540 5 219 3.51E-29 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3148 1e7c2d75e7738b29e868fd22bab05370 237 Gene3D G3DSA:3.40.50.300 6 230 6.1E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3148 1e7c2d75e7738b29e868fd22bab05370 237 PANTHER PTHR10285:SF81 19 218 1.1E-46 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 1.1E-113 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 6.2E-37 T 21-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 SUPERFAMILY SSF53756 6 353 1.06E-130 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 Gene3D G3DSA:3.40.50.2000 5 196 1.7E-76 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 PANTHER PTHR21015 1 355 9.4E-135 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 34.986 T 21-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 Gene3D G3DSA:3.40.50.2000 254 334 2.9E-5 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 PANTHER PTHR21015:SF22 1 355 9.4E-135 T 21-04-2016 SDY_0120 7a968d3b8fda059507cc65df0d12a639 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.4E-49 T 21-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 SUPERFAMILY SSF53067 4 318 5.7E-65 T 21-04-2016 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 Hamap MF_00524 Glucokinase [glk]. 2 316 40.164 T 21-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 Gene3D G3DSA:3.40.367.20 100 299 5.5E-79 T 21-04-2016 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 PANTHER PTHR30514:SF0 1 320 6.9E-126 T 21-04-2016 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 Pfam PF02685 Glucokinase 6 315 4.2E-124 T 21-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 2.9E-156 T 21-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SDY_2587 c0560e8798f8728f4844d5ae33c04b58 321 PANTHER PTHR30514 1 320 6.9E-126 T 21-04-2016 SDY_4795 d8acf85d3fbbc925eef050a74ea9bfa3 90 PANTHER PTHR33293:SF2 1 89 2.1E-20 T 21-04-2016 SDY_4795 d8acf85d3fbbc925eef050a74ea9bfa3 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4795 d8acf85d3fbbc925eef050a74ea9bfa3 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4795 d8acf85d3fbbc925eef050a74ea9bfa3 90 PANTHER PTHR33293 1 89 2.1E-20 T 21-04-2016 SDY_4813 d8acf85d3fbbc925eef050a74ea9bfa3 90 PANTHER PTHR33293:SF2 1 89 2.1E-20 T 21-04-2016 SDY_4813 d8acf85d3fbbc925eef050a74ea9bfa3 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4813 d8acf85d3fbbc925eef050a74ea9bfa3 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4813 d8acf85d3fbbc925eef050a74ea9bfa3 90 PANTHER PTHR33293 1 89 2.1E-20 T 21-04-2016 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 PANTHER PTHR11938 1 340 1.3E-253 T 21-04-2016 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 PANTHER PTHR11938:SF102 1 340 1.3E-253 T 21-04-2016 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 Pfam PF01180 Dihydroorotate dehydrogenase 6 304 1.1E-32 T 21-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 Gene3D G3DSA:3.20.20.70 4 320 4.3E-79 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 1.5E-58 T 21-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SDY_2140a cb7cce3cd19050e1db53ee7582de0243 360 SUPERFAMILY SSF51395 4 319 3.33E-69 T 21-04-2016 SDY_2997 65fa8534717f4498012197a9bedf951b 545 Pfam PF06418 CTP synthase N-terminus 5 266 5.0E-126 T 21-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SDY_2997 65fa8534717f4498012197a9bedf951b 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.6E-266 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SDY_2997 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52317 289 542 2.06E-88 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2997 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.880 288 541 1.7E-97 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2997 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.300 1 280 4.1E-134 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2997 65fa8534717f4498012197a9bedf951b 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.8E-65 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_2997 65fa8534717f4498012197a9bedf951b 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.971 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SDY_2997 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52540 3 269 4.18E-122 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2997 65fa8534717f4498012197a9bedf951b 545 PANTHER PTHR11550 1 542 0.0 T 21-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 SUPERFAMILY SSF50249 1 103 1.06E-28 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 PIRSF PIRSF003135 1 101 2.8E-49 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 2.7E-35 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 Pfam PF00436 Single-strand binding protein family 3 87 1.1E-12 T 21-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 30.209 T 21-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 SDY_4370 83fe44f708661cb5efeaa47ecfbcc0d8 104 Gene3D G3DSA:2.40.50.140 1 103 5.8E-42 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1008 b56147182c72e2d379f6b901ddb2a83e 163 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 6 60 2.0E-24 T 21-04-2016 SDY_2351 202771d243ec4ad201cea816fc47ab24 301 Gene3D G3DSA:3.30.420.10 119 282 5.6E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2351 202771d243ec4ad201cea816fc47ab24 301 SUPERFAMILY SSF53098 125 291 8.22E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2351 202771d243ec4ad201cea816fc47ab24 301 Pfam PF13276 HTH-like domain 56 104 1.3E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2351 202771d243ec4ad201cea816fc47ab24 301 Pfam PF00665 Integrase core domain 124 243 1.9E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 SUPERFAMILY SSF47203 226 381 3.54E-49 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Gene3D G3DSA:1.10.540.10 1 109 5.5E-21 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 PANTHER PTHR10909 1 383 0.0 T 21-04-2016 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Gene3D G3DSA:1.20.140.10 218 382 6.2E-58 T 21-04-2016 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 1.1E-44 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 1.5E-22 T 21-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Gene3D G3DSA:2.40.110.10 121 217 1.2E-27 T 21-04-2016 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 SUPERFAMILY SSF56645 1 227 2.88E-51 T 21-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 PANTHER PTHR10909:SF333 1 383 0.0 T 21-04-2016 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_1783 a0b4925c90b80b7ebbc7cbe1a783a265 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 3.2E-17 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SDY_0968 7a342dfc75dede254213a75eb0b09407 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 46 334 7.1E-132 T 21-04-2016 IPR014301 TMAO reductase system periplasmic, TorT SDY_0968 7a342dfc75dede254213a75eb0b09407 342 PANTHER PTHR30146:SF60 1 341 2.0E-211 T 21-04-2016 SDY_0968 7a342dfc75dede254213a75eb0b09407 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 44 337 2.7E-94 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_0968 7a342dfc75dede254213a75eb0b09407 342 Gene3D G3DSA:3.40.50.2300 45 161 1.5E-13 T 21-04-2016 SDY_0968 7a342dfc75dede254213a75eb0b09407 342 Gene3D G3DSA:3.40.50.2300 162 306 4.5E-28 T 21-04-2016 SDY_0968 7a342dfc75dede254213a75eb0b09407 342 PANTHER PTHR30146 1 341 2.0E-211 T 21-04-2016 SDY_0968 7a342dfc75dede254213a75eb0b09407 342 SUPERFAMILY SSF53822 45 300 2.9E-38 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_4205 2d9e93415ee9f3be9bc71aaed54e882c 301 SUPERFAMILY SSF53098 125 291 9.36E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4205 2d9e93415ee9f3be9bc71aaed54e882c 301 Gene3D G3DSA:3.30.420.10 119 282 5.5E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4205 2d9e93415ee9f3be9bc71aaed54e882c 301 Pfam PF00665 Integrase core domain 125 243 3.3E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4205 2d9e93415ee9f3be9bc71aaed54e882c 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2319 32c7f4c874f03de116044b66f05120a9 191 Gene3D G3DSA:3.40.50.360 1 174 3.0E-33 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2319 32c7f4c874f03de116044b66f05120a9 191 PANTHER PTHR30543:SF1 1 176 3.8E-52 T 21-04-2016 SDY_2319 32c7f4c874f03de116044b66f05120a9 191 SUPERFAMILY SSF52218 1 143 6.52E-30 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2319 32c7f4c874f03de116044b66f05120a9 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 8.9E-34 T 21-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SDY_2319 32c7f4c874f03de116044b66f05120a9 191 PANTHER PTHR30543 1 176 3.8E-52 T 21-04-2016 SDY_2319 32c7f4c874f03de116044b66f05120a9 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 4.5E-73 T 21-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 4 22 3.7E-18 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 60 73 3.7E-18 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 46 59 3.7E-18 T 21-04-2016 IPR014025 Glutaredoxin subgroup SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 Pfam PF00462 Glutaredoxin 4 63 3.2E-24 T 21-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 Gene3D G3DSA:3.40.30.10 1 73 4.2E-31 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 PANTHER PTHR10168 4 83 8.9E-31 T 21-04-2016 SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.6E-37 T 21-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 SDY_4043 e8c576ae9b777b43591ed7dca04bcfd9 83 SUPERFAMILY SSF52833 1 83 5.62E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1487 bf4031c986a047c1e8590956043efe77 301 PANTHER PTHR11122:SF14 12 301 1.0E-134 T 21-04-2016 SDY_1487 bf4031c986a047c1e8590956043efe77 301 SUPERFAMILY SSF74650 15 280 6.91E-68 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_1487 bf4031c986a047c1e8590956043efe77 301 Gene3D G3DSA:2.70.98.10 17 298 2.2E-85 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SDY_1487 bf4031c986a047c1e8590956043efe77 301 PANTHER PTHR11122 12 301 1.0E-134 T 21-04-2016 SDY_1487 bf4031c986a047c1e8590956043efe77 301 Pfam PF01263 Aldose 1-epimerase 34 277 6.5E-45 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SDY_1487 bf4031c986a047c1e8590956043efe77 301 PIRSF PIRSF016020 17 301 1.5E-53 T 21-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SMART SM00387 581 692 2.8E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Gene3D G3DSA:3.30.450.20 417 472 1.7E-6 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Gene3D G3DSA:1.10.287.130 473 520 2.4E-17 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Gene3D G3DSA:3.30.565.10 521 693 3.9E-47 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Pfam PF00072 Response regulator receiver domain 827 936 2.5E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 4.8E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 4.8E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 4.8E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 4.8E-18 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423:SF382 355 695 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 1.5E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.1E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 1.2E-34 T 21-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SUPERFAMILY SSF52172 824 947 1.99E-38 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423 28 56 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423 355 695 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SMART SM00388 469 534 1.7E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SUPERFAMILY SSF47384 453 535 2.16E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423:SF382 28 56 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423:SF382 824 948 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423:SF382 734 786 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SUPERFAMILY SSF55874 523 694 3.8E-48 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 27.378 T 21-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SUPERFAMILY SSF52172 701 815 2.2E-42 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 Gene3D G3DSA:3.40.50.2300 822 946 7.3E-40 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 SMART SM00448 825 936 1.3E-37 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423 824 948 4.4E-265 T 21-04-2016 SDY_0856 226724dda3bd47b4010a7a5cc8efb610 949 PANTHER PTHR24423 734 786 4.4E-265 T 21-04-2016 SDY_0497 befeec2f3dd234bc5963ca3a0d4c8388 330 PANTHER PTHR35037:SF2 28 322 1.1E-115 T 21-04-2016 SDY_0497 befeec2f3dd234bc5963ca3a0d4c8388 330 SUPERFAMILY SSF51126 12 311 3.77E-25 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor SDY_0497 befeec2f3dd234bc5963ca3a0d4c8388 330 Gene3D G3DSA:2.160.20.20 9 300 4.5E-5 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_0497 befeec2f3dd234bc5963ca3a0d4c8388 330 PANTHER PTHR35037 28 322 1.1E-115 T 21-04-2016 SDY_3845 6093808160681edcb8681968d6dbdeea 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.819 T 21-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 SDY_3845 6093808160681edcb8681968d6dbdeea 104 PANTHER PTHR34389 1 103 6.0E-60 T 21-04-2016 SDY_3845 6093808160681edcb8681968d6dbdeea 104 PANTHER PTHR34389:SF2 1 103 6.0E-60 T 21-04-2016 SDY_3845 6093808160681edcb8681968d6dbdeea 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 1.8E-29 T 21-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 SDY_3845 6093808160681edcb8681968d6dbdeea 104 SUPERFAMILY SSF54909 1 104 3.56E-38 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_3845 6093808160681edcb8681968d6dbdeea 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 1.8E-58 T 21-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:3.40.50.620 4 205 9.5E-90 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PANTHER PTHR10055 2 334 4.4E-190 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 SUPERFAMILY SSF52374 5 330 2.85E-98 T 21-04-2016 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PANTHER PTHR10055:SF10 2 334 4.4E-190 T 21-04-2016 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.643 T 21-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.7E-118 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:1.10.240.10 206 324 1.3E-20 T 21-04-2016 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 21-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_3695 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 7.7E-90 T 21-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 SUPERFAMILY SSF50331 6 76 5.59E-21 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 74 2.6E-23 T 21-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 78 145 4.2E-19 T 21-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 PANTHER PTHR30432 5 147 5.8E-15 T 21-04-2016 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 Pfam PF03459 TOBE domain 81 141 3.0E-15 T 21-04-2016 IPR005116 Transport-associated OB, type 1 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 Pfam PF03459 TOBE domain 9 71 4.8E-16 T 21-04-2016 IPR005116 Transport-associated OB, type 1 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 SUPERFAMILY SSF50331 52 143 4.13E-19 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 Gene3D G3DSA:2.40.50.100 5 74 2.5E-29 T 21-04-2016 SDY_2931 aabc50cf6c223a5d234ef6b66c4a823b 147 Gene3D G3DSA:2.40.50.100 77 146 1.1E-25 T 21-04-2016 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 SUPERFAMILY SSF54171 17 51 1.5E-12 T 21-04-2016 IPR016177 DNA-binding domain GO:0003677 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Gene3D G3DSA:3.30.160.60 17 57 1.8E-17 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Pfam PF00589 Phage integrase family 173 339 1.4E-36 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 75 152 2.8E-11 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 18 63 1.2E-13 T 21-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 PANTHER PTHR30349:SF20 67 347 1.7E-21 T 21-04-2016 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 SUPERFAMILY SSF56349 68 344 5.89E-64 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Gene3D G3DSA:1.10.443.10 172 346 2.0E-49 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 Gene3D G3DSA:1.10.150.130 68 169 5.8E-36 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal SDY_2420 24ab96b8ef49350a60ee2d24d5c2e251 351 PANTHER PTHR30349 67 347 1.7E-21 T 21-04-2016 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 PIRSF PIRSF029827 1 90 1.3E-44 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-44 T 21-04-2016 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 PANTHER PTHR36965 2 91 1.5E-55 T 21-04-2016 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 PANTHER PTHR36965:SF1 2 91 1.5E-55 T 21-04-2016 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.992 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.0E-40 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SDY_3110 d3e155df63b4b26d95a6a761b36e6453 91 SUPERFAMILY SSF111148 1 90 1.44E-40 T 21-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 PANTHER PTHR10357 6 110 6.3E-184 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 PANTHER PTHR10357 160 491 6.3E-184 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 SUPERFAMILY SSF51011 405 491 1.03E-29 T 21-04-2016 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 Gene3D G3DSA:2.60.40.1180 408 491 6.0E-31 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta SDY_1088 a9796413954f25f1f279d4688d478d6a 495 SMART SM00642 4 402 4.1E-60 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 Pfam PF00128 Alpha amylase, catalytic domain 28 367 6.7E-21 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 SUPERFAMILY SSF51445 6 378 2.46E-88 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_1088 a9796413954f25f1f279d4688d478d6a 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 416 491 6.4E-6 T 21-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 PIRSF PIRSF001021 1 494 9.4E-209 T 21-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 PANTHER PTHR10357:SF156 6 110 6.3E-184 T 21-04-2016 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 PANTHER PTHR10357:SF156 160 491 6.3E-184 T 21-04-2016 SDY_1088 a9796413954f25f1f279d4688d478d6a 495 Gene3D G3DSA:3.20.20.80 2 406 3.7E-69 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_3920 7155553ec2f3ddcf2bfd258e4ab5be4d 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 5.3E-70 T 21-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 SDY_3920 7155553ec2f3ddcf2bfd258e4ab5be4d 206 PANTHER PTHR30086 1 206 1.5E-142 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3920 7155553ec2f3ddcf2bfd258e4ab5be4d 206 PIRSF PIRSF006324 1 206 4.5E-41 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3920 7155553ec2f3ddcf2bfd258e4ab5be4d 206 PANTHER PTHR30086:SF1 1 206 1.5E-142 T 21-04-2016 SDY_3920 7155553ec2f3ddcf2bfd258e4ab5be4d 206 Pfam PF01810 LysE type translocator 14 205 8.7E-57 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 226 9.1E-129 T 21-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 Gene3D G3DSA:1.20.950.20 3 217 2.0E-70 T 21-04-2016 SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 PANTHER PTHR30598 2 226 4.1E-198 T 21-04-2016 SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 SUPERFAMILY SSF103501 3 225 8.63E-70 T 21-04-2016 IPR023234 NarG-like domain SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 4.3E-79 T 21-04-2016 IPR023234 NarG-like domain SDY_1653 f296c6acfc7fc737f1eac735c628ab75 226 PANTHER PTHR30598:SF4 2 226 4.1E-198 T 21-04-2016 SDY_1085 3ee66204766ce5067aac3c93ef2e04c6 77 PANTHER PTHR33279 1 77 4.3E-27 T 21-04-2016 SDY_1085 3ee66204766ce5067aac3c93ef2e04c6 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 21-04-2016 IPR001455 TusA-like domain SDY_1085 3ee66204766ce5067aac3c93ef2e04c6 77 SUPERFAMILY SSF64307 2 77 2.75E-24 T 21-04-2016 IPR001455 TusA-like domain SDY_1085 3ee66204766ce5067aac3c93ef2e04c6 77 Gene3D G3DSA:3.30.110.40 6 77 2.2E-33 T 21-04-2016 IPR001455 TusA-like domain SDY_1085 3ee66204766ce5067aac3c93ef2e04c6 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 21-04-2016 IPR001455 TusA-like domain SDY_4426 5029aa13e124c659bb7979883c7a1907 374 Pfam PF03853 YjeF-related protein N-terminus 3 58 2.4E-14 T 21-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 PANTHER PTHR12592 1 366 7.6E-107 T 21-04-2016 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 182 192 - T 21-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SDY_4426 5029aa13e124c659bb7979883c7a1907 374 SUPERFAMILY SSF64153 3 115 1.31E-23 T 21-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 90 358 7.2E-100 T 21-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 Gene3D G3DSA:3.40.50.10260 2 99 1.6E-26 T 21-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 SUPERFAMILY SSF53613 92 357 7.42E-76 T 21-04-2016 IPR029056 Ribokinase-like SDY_4426 5029aa13e124c659bb7979883c7a1907 374 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 297 307 - T 21-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SDY_4426 5029aa13e124c659bb7979883c7a1907 374 PANTHER PTHR12592:SF0 1 366 7.6E-107 T 21-04-2016 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 Pfam PF01256 Carbohydrate kinase 117 355 4.2E-82 T 21-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 93 362 23.367 T 21-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SDY_4426 5029aa13e124c659bb7979883c7a1907 374 Gene3D G3DSA:3.40.1190.20 100 357 2.3E-92 T 21-04-2016 IPR029056 Ribokinase-like SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 Gene3D G3DSA:3.30.70.20 36 72 1.9E-10 T 21-04-2016 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 7 157 2.3E-73 T 21-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 37 48 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 PANTHER PTHR24960 1 160 1.4E-72 T 21-04-2016 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 PANTHER PTHR24960:SF46 1 160 1.4E-72 T 21-04-2016 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 Gene3D G3DSA:3.30.70.20 73 159 1.7E-13 T 21-04-2016 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 Pfam PF12800 4Fe-4S binding domain 101 118 0.6 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 SUPERFAMILY SSF54862 33 158 4.74E-18 T 21-04-2016 SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 Pfam PF00037 4Fe-4S binding domain 136 157 4.9E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 Pfam PF13187 4Fe-4S dicluster domain 37 82 5.3E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_0870 0bc7f19f0bddf8014df39f2d18aada63 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 21-04-2016 IPR001310 Histidine triad (HIT) protein SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 Pfam PF01230 HIT domain 12 109 5.6E-30 T 21-04-2016 IPR001310 Histidine triad (HIT) protein SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 PANTHER PTHR23089:SF2 2 112 3.5E-50 T 21-04-2016 SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 Gene3D G3DSA:3.30.428.10 3 110 7.9E-38 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 PANTHER PTHR23089 2 112 3.5E-50 T 21-04-2016 IPR001310 Histidine triad (HIT) protein SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 SUPERFAMILY SSF54197 3 113 1.33E-35 T 21-04-2016 IPR011146 HIT-like domain GO:0003824 SDY_2047 9ff6dd7a7b30ba73eab5708460772111 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 21-04-2016 IPR019808 Histidine triad, conserved site SDY_2830 79418c8d83875c099c912df867d9aa6e 432 PANTHER PTHR23508 14 431 0.0 T 21-04-2016 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 SUPERFAMILY SSF103473 18 430 2.35E-64 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2830 79418c8d83875c099c912df867d9aa6e 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 1.7E-146 T 21-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 Gene3D G3DSA:1.20.1250.20 240 428 3.7E-18 T 21-04-2016 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 Gene3D G3DSA:1.20.1250.20 22 227 3.0E-25 T 21-04-2016 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 Pfam PF00083 Sugar (and other) transporter 24 221 4.6E-26 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 Pfam PF00083 Sugar (and other) transporter 223 421 6.7E-12 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_2830 79418c8d83875c099c912df867d9aa6e 432 PANTHER PTHR23508:SF12 14 431 0.0 T 21-04-2016 SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 SUPERFAMILY SSF52540 8 233 1.08E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 Pfam PF00005 ABC transporter 24 171 4.1E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 SMART SM00382 32 229 7.4E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 PANTHER PTHR24220:SF438 9 268 4.5E-166 T 21-04-2016 SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 Gene3D G3DSA:3.40.50.300 8 241 5.9E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0519 791f92ae0a9d676a1175a548eee6ddb5 271 PANTHER PTHR24220 9 268 4.5E-166 T 21-04-2016 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 PANTHER PTHR10160 1 510 0.0 T 21-04-2016 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Gene3D G3DSA:3.40.50.1770 202 371 4.2E-47 T 21-04-2016 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Gene3D G3DSA:3.40.50.1770 1 168 1.1E-69 T 21-04-2016 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Gene3D G3DSA:3.50.50.60 169 201 4.7E-6 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.4E-52 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 PIRSF PIRSF000203 1 509 4.0E-288 T 21-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 0.0 T 21-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 SMART SM01003 4 137 5.3E-76 T 21-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 21-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 21-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 3.9E-36 T 21-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 SUPERFAMILY SSF51735 137 317 1.69E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 SUPERFAMILY SSF52283 1 168 1.02E-56 T 21-04-2016 SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 SMART SM01002 146 311 5.5E-85 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SDY_1550 2a1d9eb3a24c2080362f325606ce68e5 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.7E-76 T 21-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SDY_2949 e76736719b951c91dc283a3fd5205c58 201 SUPERFAMILY SSF52540 24 194 1.65E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2949 e76736719b951c91dc283a3fd5205c58 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 1.4E-89 T 21-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SDY_2949 e76736719b951c91dc283a3fd5205c58 201 PANTHER PTHR11055 5 199 4.4E-132 T 21-04-2016 SDY_2949 e76736719b951c91dc283a3fd5205c58 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.735 T 21-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SDY_2949 e76736719b951c91dc283a3fd5205c58 201 Gene3D G3DSA:3.40.50.300 6 200 2.0E-88 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2949 e76736719b951c91dc283a3fd5205c58 201 Pfam PF01583 Adenylylsulphate kinase 27 179 9.8E-73 T 21-04-2016 SDY_1400 2143125046eaacae37a8225309adb03b 344 Pfam PF05128 Domain of unknown function (DUF697) 183 341 9.5E-54 T 21-04-2016 IPR021147 Protein of unknown function DUF697 SDY_1400 2143125046eaacae37a8225309adb03b 344 PANTHER PTHR39342 1 344 3.6E-147 T 21-04-2016 SDY_1400 2143125046eaacae37a8225309adb03b 344 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 2.3E-149 T 21-04-2016 IPR006507 Uncharacterised protein family UPF0283 SDY_1400 2143125046eaacae37a8225309adb03b 344 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 344 37.74 T 21-04-2016 IPR006507 Uncharacterised protein family UPF0283 SDY_1400 2143125046eaacae37a8225309adb03b 344 PANTHER PTHR39342:SF1 1 344 3.6E-147 T 21-04-2016 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 Pfam PF00293 NUDIX domain 7 146 5.1E-27 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 Gene3D G3DSA:3.90.79.10 3 151 7.1E-33 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 PANTHER PTHR23114 1 164 1.2E-69 T 21-04-2016 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.961 T 21-04-2016 IPR022927 RNA pyrophosphohydrolase RppH SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 SUPERFAMILY SSF55811 5 159 6.77E-33 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_3047 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 SUPERFAMILY SSF101756 30 130 2.35E-27 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 Pfam PF04076 Bacterial OB fold (BOF) protein 30 130 2.6E-42 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 PANTHER PTHR36571 2 130 1.1E-102 T 21-04-2016 SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 Gene3D G3DSA:2.40.50.200 29 130 1.6E-29 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 2.1E-61 T 21-04-2016 IPR016052 Bacteriophage 933W, L0136 SDY_1589 ea68ef288de37bb806484d8b718a5f5d 130 PANTHER PTHR36571:SF2 2 130 1.1E-102 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 Gene3D G3DSA:3.90.199.10 34 216 4.7E-84 T 21-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 847 29.96 T 21-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 SMART SM00434 11 499 2.4E-298 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 PANTHER PTHR10169 450 814 0.0 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 PANTHER PTHR10169 2 418 0.0 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 7.5E-11 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 8.1E-15 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.0E-13 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.0E-10 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 9.3E-13 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 3.6E-7 T 21-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 SUPERFAMILY SSF101904 533 851 5.36E-111 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 4.1E-153 T 21-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_2423 1c486add9cbee18738bda1659123f977 875 Gene3D G3DSA:2.120.10.90 531 839 4.2E-139 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 Gene3D G3DSA:3.30.1360.40 236 333 3.3E-38 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain SDY_2423 1c486add9cbee18738bda1659123f977 875 PANTHER PTHR10169:SF48 450 814 0.0 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 PANTHER PTHR10169:SF48 2 418 0.0 T 21-04-2016 SDY_2423 1c486add9cbee18738bda1659123f977 875 SUPERFAMILY SSF56719 30 521 6.8E-182 T 21-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SDY_2423 1c486add9cbee18738bda1659123f977 875 Gene3D G3DSA:1.10.268.10 363 496 2.8E-49 T 21-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SDY_4581 a889a006d560e644830cd042c0751749 91 PANTHER PTHR33293 2 91 1.6E-31 T 21-04-2016 SDY_4581 a889a006d560e644830cd042c0751749 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4581 a889a006d560e644830cd042c0751749 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4581 a889a006d560e644830cd042c0751749 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4581 a889a006d560e644830cd042c0751749 91 Pfam PF03811 InsA N-terminal domain 2 36 8.2E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.9E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.9E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.9E-11 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 SUPERFAMILY SSF46955 12 134 2.16E-27 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 PANTHER PTHR30204 4 142 4.8E-87 T 21-04-2016 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 SMART SM00422 12 80 1.2E-22 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 PANTHER PTHR30204:SF0 4 142 4.8E-87 T 21-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 Pfam PF09278 MerR, DNA binding 54 119 8.7E-15 T 21-04-2016 IPR015358 Transcription regulator MerR, DNA binding SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 Pfam PF00376 MerR family regulatory protein 13 49 1.4E-13 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 Gene3D G3DSA:1.10.1660.10 10 65 3.2E-18 T 21-04-2016 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 4.7E-75 T 21-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 SDY_4504 a1a3f0ca97e2d301588bead4f4b7ffac 154 Gene3D G3DSA:1.10.1660.10 66 144 7.0E-14 T 21-04-2016 SDY_2877 63c86ad88c3bd4f1128377cee8054258 245 PANTHER PTHR34979 1 245 7.6E-57 T 21-04-2016 SDY_2877 63c86ad88c3bd4f1128377cee8054258 245 Pfam PF03591 AzlC protein 24 165 1.4E-37 T 21-04-2016 IPR011606 Branched-chain amino acid transport, permease SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-37 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 2.0E-99 T 21-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PANTHER PTHR11922 1 185 1.7E-99 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 SUPERFAMILY SSF52317 1 186 9.34E-58 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.9E-14 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.9E-14 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.9E-14 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.3E-57 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PANTHER PTHR11922:SF7 1 185 1.7E-99 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 Gene3D G3DSA:3.40.50.880 1 186 7.8E-70 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.1E-6 T 21-04-2016 SDY_3522 e75efc7826eed684fa0728aff586cc9b 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.1E-6 T 21-04-2016 SDY_1768 4715d4027aad4c3c62b7ceef6d486698 100 Gene3D G3DSA:1.10.10.60 9 90 1.5E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1768 4715d4027aad4c3c62b7ceef6d486698 100 SUPERFAMILY SSF46689 4 94 1.0E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1768 4715d4027aad4c3c62b7ceef6d486698 100 PANTHER PTHR33215 3 100 2.2E-15 T 21-04-2016 SDY_1768 4715d4027aad4c3c62b7ceef6d486698 100 Pfam PF01527 Transposase 3 74 9.4E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Pfam PF02811 PHP domain 8 171 6.5E-40 T 21-04-2016 IPR004013 PHP domain GO:0003824 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 2.0E-8 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 2.8E-25 T 21-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 SMART SM00481 7 74 1.5E-26 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 SUPERFAMILY SSF89550 6 263 2.94E-17 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 PANTHER PTHR32294 2 1160 0.0 T 21-04-2016 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 PANTHER PTHR32294:SF0 2 1160 0.0 T 21-04-2016 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Gene3D G3DSA:2.40.50.140 982 1078 7.6E-11 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 2.5E-179 T 21-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Gene3D G3DSA:3.20.20.140 6 257 5.7E-21 T 21-04-2016 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 Gene3D G3DSA:1.10.150.280 836 883 1.0E-5 T 21-04-2016 SDY_0200 6527e32f6873a04f447e125d0a513166 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 21-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_2377 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 71 6.9E-39 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2377 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SDY_2377 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 21-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SDY_2377 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 21-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SDY_2377 7685e403ced062aa096db5195bf558e7 72 PANTHER PTHR33370 1 72 3.6E-50 T 21-04-2016 SDY_2377 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2377 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_3856 d66207afec71dec6a480214072fb189a 145 SUPERFAMILY SSF69500 1 144 1.44E-56 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SDY_3856 d66207afec71dec6a480214072fb189a 145 PANTHER PTHR10472 2 144 1.6E-76 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SDY_3856 d66207afec71dec6a480214072fb189a 145 Gene3D G3DSA:3.50.80.10 1 144 1.1E-56 T 21-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SDY_3856 d66207afec71dec6a480214072fb189a 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.9E-76 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SDY_3856 d66207afec71dec6a480214072fb189a 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 4.9E-53 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SDY_3856 d66207afec71dec6a480214072fb189a 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.853 T 21-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 421 438 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Gene3D G3DSA:3.90.55.10 423 529 4.4E-35 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 PANTHER PTHR11615:SF163 2 348 0.0 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 PANTHER PTHR11615:SF163 366 739 0.0 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 SUPERFAMILY SSF50692 593 736 2.49E-37 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Gene3D G3DSA:2.40.40.20 574 732 5.9E-53 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Pfam PF01568 Molydopterin dinucleotide binding domain 599 702 8.2E-24 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Gene3D G3DSA:3.40.228.10 117 325 4.0E-60 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 SUPERFAMILY SSF53706 8 595 1.83E-158 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 PANTHER PTHR11615 2 348 0.0 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 PANTHER PTHR11615 366 739 0.0 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Gene3D G3DSA:3.40.50.740 326 422 3.1E-45 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Gene3D G3DSA:3.40.50.740 10 112 3.1E-45 T 21-04-2016 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 637 664 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 Pfam PF00384 Molybdopterin oxidoreductase 18 479 3.2E-112 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_4352 2619242c3a724280e8ae90c16a77a5f5 739 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 3 737 0.0 T 21-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82714 182 272 1.7E-21 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 21-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82714 723 809 5.36E-23 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82693 39 132 4.53E-27 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PANTHER PTHR32063 1 1037 0.0 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82866 296 497 1.44E-47 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:1.10.3850.10 815 1028 2.1E-56 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:3.30.2090.10 181 275 3.6E-27 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:3.30.2090.10 722 811 1.4E-28 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:1.20.1640.10 292 506 7.1E-57 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-110 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82866 807 1030 5.49E-45 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 PANTHER PTHR32063:SF32 1 1037 0.0 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82693 138 182 1.46E-24 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82693 274 330 1.46E-24 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:3.30.70.1430 39 139 2.5E-34 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 SUPERFAMILY SSF82693 566 672 7.32E-29 T 21-04-2016 SDY_2654 62ac357e61f00635fb961d736cd5a63d 1037 Gene3D G3DSA:3.30.70.1430 568 672 5.8E-34 T 21-04-2016 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 21-04-2016 IPR005824 KOW SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 PANTHER PTHR30265 3 180 7.2E-88 T 21-04-2016 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 SMART SM00739 127 154 7.9E-7 T 21-04-2016 IPR005824 KOW SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 SMART SM00738 6 115 5.9E-51 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 SUPERFAMILY SSF82679 6 116 2.49E-40 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 21-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 Gene3D G3DSA:2.30.30.30 120 181 1.7E-32 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.8E-27 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 Gene3D G3DSA:3.30.70.940 6 116 4.3E-43 T 21-04-2016 IPR006645 NusG, N-terminal GO:0006355 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 5.7E-72 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.014 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SDY_3746 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 21-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SDY_0838 7d085542409224b55607c7d57adb8b1e 210 SUPERFAMILY SSF47616 86 205 2.09E-27 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_0838 7d085542409224b55607c7d57adb8b1e 210 PANTHER PTHR11260:SF157 3 207 9.5E-92 T 21-04-2016 SDY_0838 7d085542409224b55607c7d57adb8b1e 210 PANTHER PTHR11260 3 207 9.5E-92 T 21-04-2016 SDY_0838 7d085542409224b55607c7d57adb8b1e 210 SUPERFAMILY SSF52833 2 87 1.69E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0838 7d085542409224b55607c7d57adb8b1e 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 199 3.7E-10 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal SDY_0838 7d085542409224b55607c7d57adb8b1e 210 Gene3D G3DSA:3.40.30.10 2 84 1.7E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0838 7d085542409224b55607c7d57adb8b1e 210 Gene3D G3DSA:1.20.1050.10 90 205 4.8E-29 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_0838 7d085542409224b55607c7d57adb8b1e 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 78 2.5E-14 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_4276 9a7b835067364e7d51a955939d7db146 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 6.6E-54 T 21-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PANTHER PTHR11405:SF42 1 276 1.0E-242 T 21-04-2016 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PANTHER PTHR11405:SF42 297 333 1.0E-242 T 21-04-2016 SDY_4276 9a7b835067364e7d51a955939d7db146 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 9.7E-48 T 21-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PANTHER PTHR11405 1 276 1.0E-242 T 21-04-2016 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PANTHER PTHR11405 297 333 1.0E-242 T 21-04-2016 SDY_4276 9a7b835067364e7d51a955939d7db146 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.052 T 21-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 Gene3D G3DSA:3.40.50.1370 144 319 3.3E-73 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 SUPERFAMILY SSF53671 2 333 3.27E-98 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 Gene3D G3DSA:3.40.50.1370 4 143 3.5E-58 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.4E-139 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.0E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.0E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.0E-25 T 21-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.9E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.9E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.9E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.9E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_4276 9a7b835067364e7d51a955939d7db146 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.9E-32 T 21-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 PANTHER PTHR11819 4 490 3.1E-192 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 3.6E-233 T 21-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 PANTHER PTHR11819:SF148 4 490 3.1E-192 T 21-04-2016 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 Pfam PF00474 Sodium:solute symporter family 35 437 2.7E-147 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.9E-132 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_0990 9e3e90daf1608065c09bac1b012a5432 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 PANTHER PTHR11601 1 412 1.0E-247 T 21-04-2016 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 Gene3D G3DSA:3.40.640.10 25 262 3.9E-99 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 9 412 2.7E-236 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 Pfam PF00266 Aminotransferase class-V 13 376 1.4E-89 T 21-04-2016 IPR000192 Aminotransferase class V domain SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 Gene3D G3DSA:3.90.1150.10 263 383 2.2E-52 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 PIRSF PIRSF005572 10 392 2.1E-144 T 21-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 SUPERFAMILY SSF53383 13 399 4.79E-117 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 205 224 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 9 403 56.355 T 21-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SDY_2726 7daf9b4ec18d834de497ba267c48a7cd 412 PANTHER PTHR11601:SF45 1 412 1.0E-247 T 21-04-2016 SDY_3592 69904899b7901c707496cde551fd80d7 120 Gene3D G3DSA:3.40.630.30 2 120 6.8E-24 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3592 69904899b7901c707496cde551fd80d7 120 SUPERFAMILY SSF55729 4 120 9.45E-19 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3592 69904899b7901c707496cde551fd80d7 120 PANTHER PTHR23091 1 120 1.4E-72 T 21-04-2016 SDY_3592 69904899b7901c707496cde551fd80d7 120 Pfam PF13673 Acetyltransferase (GNAT) domain 38 112 1.0E-6 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3592 69904899b7901c707496cde551fd80d7 120 PANTHER PTHR23091:SF262 1 120 1.4E-72 T 21-04-2016 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 424 34.663 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 SUPERFAMILY SSF55205 1 422 9.35E-147 T 21-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 PIRSF PIRSF000505 1 424 4.6E-157 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 PANTHER PTHR21090 1 424 1.6E-219 T 21-04-2016 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 4.4E-155 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 Gene3D G3DSA:3.65.10.10 22 237 1.9E-66 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 Gene3D G3DSA:3.65.10.10 238 422 6.0E-74 T 21-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 7.6E-140 T 21-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2353 e83cd1c0762cd62726435955fa9d9a9c 424 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 21-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3471 abbc8565f25c570f2216312bc1631480 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 8.6E-113 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 21-04-2016 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 21-04-2016 SDY_3471 abbc8565f25c570f2216312bc1631480 329 PANTHER PTHR32108:SF0 1 329 3.6E-159 T 21-04-2016 SDY_3471 abbc8565f25c570f2216312bc1631480 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 21-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 PANTHER PTHR32108 1 329 3.6E-159 T 21-04-2016 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 2.4E-23 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.622 T 21-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 SUPERFAMILY SSF56553 53 178 2.09E-41 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3471 abbc8565f25c570f2216312bc1631480 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 21-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SDY_3471 abbc8565f25c570f2216312bc1631480 329 SMART SM00662 23 234 4.1E-105 T 21-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3471 abbc8565f25c570f2216312bc1631480 329 Gene3D G3DSA:2.170.120.12 58 177 7.3E-40 T 21-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SDY_3471 abbc8565f25c570f2216312bc1631480 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 21-04-2016 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 180.446 T 21-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.1E-79 T 21-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 SUPERFAMILY SSF56059 123 312 2.43E-60 T 21-04-2016 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 PANTHER PTHR21621 1 316 2.0E-171 T 21-04-2016 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Gene3D G3DSA:3.30.1490.20 137 191 3.8E-32 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 SUPERFAMILY SSF52440 2 122 2.82E-45 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Gene3D G3DSA:3.30.470.20 192 297 5.0E-50 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Gene3D G3DSA:3.40.50.20 2 129 9.0E-54 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.0E-138 T 21-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 PANTHER PTHR21621:SF4 1 316 2.0E-171 T 21-04-2016 SDY_3125 a75817539fcb02c7f444937af87a8cf7 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.4E-44 T 21-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 SDY_3292 7e16d6a32a5d431053e2ae0c8bd741fc 121 Pfam PF05656 Protein of unknown function (DUF805) 11 117 9.2E-35 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SDY_3292 7e16d6a32a5d431053e2ae0c8bd741fc 121 PANTHER PTHR34980 1 118 2.1E-35 T 21-04-2016 SDY_3292 7e16d6a32a5d431053e2ae0c8bd741fc 121 PANTHER PTHR34980:SF2 1 118 2.1E-35 T 21-04-2016 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 21-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 21-04-2016 SDY_3249 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 21-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 1.7E-73 T 21-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 SUPERFAMILY SSF52540 1 210 6.25E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 Gene3D G3DSA:3.40.50.300 1 140 4.3E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 PANTHER PTHR34388 1 342 9.2E-89 T 21-04-2016 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 SUPERFAMILY SSF48019 212 335 1.87E-36 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 Gene3D G3DSA:1.20.272.20 223 341 1.3E-52 T 21-04-2016 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.1E-106 T 21-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 Gene3D G3DSA:1.10.8.60 143 222 1.1E-37 T 21-04-2016 SDY_0562 8fdcd4f18d57d0a9ef546eebaec8acbf 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.2E-47 T 21-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SDY_1699 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1699 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_1699 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_0716 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0716 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_0716 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_4635 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4635 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_4635 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_0859 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0859 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_0859 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_4424 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4424 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_4424 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_1273 e9bbbd4f5c10a16ccc44898894447027 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1273 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293:SF1 6 126 1.6E-24 T 21-04-2016 SDY_1273 e9bbbd4f5c10a16ccc44898894447027 131 PANTHER PTHR33293 6 126 1.6E-24 T 21-04-2016 SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 SUPERFAMILY SSF75620 12 158 2.09E-39 T 21-04-2016 SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 Gene3D G3DSA:3.30.160.20 69 134 1.0E-25 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 1 163 1.7E-79 T 21-04-2016 IPR017509 Putative peptide chain release factor H SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 PANTHER PTHR11075:SF53 1 166 2.9E-86 T 21-04-2016 SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 Pfam PF00472 RF-1 domain 67 143 2.5E-22 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_0481 0d48eb8750cd0c61597c5c4e73f0e4b7 166 PANTHER PTHR11075 1 166 2.9E-86 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 Gene3D G3DSA:3.40.190.10 127 233 1.1E-31 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 SUPERFAMILY SSF53850 8 274 2.88E-64 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 PANTHER PTHR30085:SF2 10 300 6.9E-143 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 Gene3D G3DSA:3.40.190.10 38 126 2.6E-31 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 Gene3D G3DSA:3.40.190.10 234 276 2.6E-31 T 21-04-2016 SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 3.8E-48 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 SMART SM00062 41 273 5.6E-72 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0592 f8229ee49d6b3219cae09be5df2b8c13 302 PANTHER PTHR30085 10 300 6.9E-143 T 21-04-2016 SDY_1113 f280d9f948d7fad2e551a8eb6e58ff3f 165 Gene3D G3DSA:1.20.1260.10 1 160 2.9E-58 T 21-04-2016 IPR012347 Ferritin-related SDY_1113 f280d9f948d7fad2e551a8eb6e58ff3f 165 Pfam PF00210 Ferritin-like domain 7 143 3.0E-35 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SDY_1113 f280d9f948d7fad2e551a8eb6e58ff3f 165 PANTHER PTHR11431 4 164 3.3E-46 T 21-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 SDY_1113 f280d9f948d7fad2e551a8eb6e58ff3f 165 SUPERFAMILY SSF47240 3 161 3.54E-56 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_1113 f280d9f948d7fad2e551a8eb6e58ff3f 165 PANTHER PTHR11431:SF4 4 164 3.3E-46 T 21-04-2016 SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 Gene3D G3DSA:3.90.550.10 30 300 1.4E-68 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 PANTHER PTHR13778 5 313 3.8E-76 T 21-04-2016 SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 Pfam PF08437 Glycosyl transferase family 8 C-terminal 279 335 9.3E-23 T 21-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 SUPERFAMILY SSF53448 31 300 2.78E-66 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 PANTHER PTHR13778:SF10 5 313 3.8E-76 T 21-04-2016 SDY_4059 8e240983c51dc0e00210fa2611fa9481 338 Pfam PF01501 Glycosyl transferase family 8 31 277 4.5E-70 T 21-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 SUPERFAMILY SSF55159 5 105 9.81E-26 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 Gene3D G3DSA:3.30.780.10 29 109 1.6E-35 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 PIRSF PIRSF037511 1 109 2.7E-37 T 21-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 Pfam PF01253 Translation initiation factor SUI1 33 102 6.3E-19 T 21-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 PANTHER PTHR12789 2 109 2.0E-41 T 21-04-2016 SDY_1358 865bfb73793b7eee46b8be9177934d23 109 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 9 109 4.2E-40 T 21-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 PIRSF PIRSF000460 1 797 4.4E-206 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 Gene3D G3DSA:3.40.50.2000 463 780 2.0E-135 T 21-04-2016 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 PANTHER PTHR11468 1 793 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 Gene3D G3DSA:3.40.50.2000 7 462 7.5E-184 T 21-04-2016 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 794 0.0 T 21-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 SUPERFAMILY SSF53756 8 795 5.26E-296 T 21-04-2016 SDY_3659 68f8ec8b6e5023d8729a1f24f9767e27 797 PANTHER PTHR11468:SF10 1 793 0.0 T 21-04-2016 SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 77 4.3E-20 T 21-04-2016 IPR022789 Antitoxin ParD SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 74 7.0E-26 T 21-04-2016 IPR022789 Antitoxin ParD SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 PANTHER PTHR36582 1 83 3.4E-39 T 21-04-2016 SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 Gene3D G3DSA:1.10.1220.10 5 38 0.001 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 PANTHER PTHR36582:SF2 1 83 3.4E-39 T 21-04-2016 SDY_2257 1af5276b9beeaa5eef29e5e00e4a6806 83 SUPERFAMILY SSF47598 4 44 1.67E-9 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 48.703 T 21-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 PANTHER PTHR12418 2 136 8.6E-53 T 21-04-2016 SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 2.2E-47 T 21-04-2016 IPR003736 Phenylacetic acid degradation-related domain SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 SUPERFAMILY SSF54637 1 133 1.94E-29 T 21-04-2016 IPR029069 HotDog domain SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 PANTHER PTHR12418:SF33 2 136 8.6E-53 T 21-04-2016 SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 Pfam PF03061 Thioesterase superfamily 50 127 9.6E-17 T 21-04-2016 IPR006683 Thioesterase domain SDY_1674 64c850bb918a31acbefa8a5c44437e7f 136 Gene3D G3DSA:3.10.129.10 1 136 8.9E-52 T 21-04-2016 IPR029069 HotDog domain SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 Gene3D G3DSA:3.40.50.150 28 224 1.6E-45 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 SUPERFAMILY SSF53335 17 224 2.84E-44 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.9E-91 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.456 T 21-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 Pfam PF13489 Methyltransferase domain 57 170 4.2E-25 T 21-04-2016 SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 PANTHER PTHR10108:SF910 1 240 5.5E-179 T 21-04-2016 SDY_2424 c85df4f0f034c51fe420ff314ef1d243 240 PANTHER PTHR10108 1 240 5.5E-179 T 21-04-2016 SDY_4600 17e081e0d5694f0d2674456db69a930c 314 Pfam PF04754 Putative transposase, YhgA-like 8 210 1.4E-87 T 21-04-2016 IPR006842 Transposase (putative), YhgA-like SDY_4600 17e081e0d5694f0d2674456db69a930c 314 PANTHER PTHR34611:SF3 2 302 2.0E-176 T 21-04-2016 SDY_4600 17e081e0d5694f0d2674456db69a930c 314 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 297 2.8E-50 T 21-04-2016 IPR010106 Conserved hypothetical protein CHP01784 SDY_4600 17e081e0d5694f0d2674456db69a930c 314 PANTHER PTHR34611 2 302 2.0E-176 T 21-04-2016 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 Gene3D G3DSA:3.40.50.270 6 147 1.1E-45 T 21-04-2016 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.8E-29 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 8.8E-29 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.8E-29 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 8.8E-29 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 8.8E-29 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 SUPERFAMILY SSF52788 5 146 9.29E-42 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SDY_0958 e708f2101280a7bb3d02956365052fbb 148 SMART SM00226 7 145 1.6E-68 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PANTHER PTHR11717 9 146 4.6E-51 T 21-04-2016 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 PANTHER PTHR11717:SF20 9 146 4.6E-51 T 21-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SDY_0958 e708f2101280a7bb3d02956365052fbb 148 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 143 2.2E-45 T 21-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 PANTHER PTHR11995:SF20 13 199 1.1E-87 T 21-04-2016 SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 Gene3D G3DSA:3.40.50.700 34 156 8.5E-24 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 PANTHER PTHR11995 13 199 1.1E-87 T 21-04-2016 SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 44 151 1.7E-19 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 127 143 - T 21-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SDY_2678 e3dee1f39d36484f1e5fdea248b13a08 252 SUPERFAMILY SSF56770 32 163 1.83E-45 T 21-04-2016 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 PANTHER PTHR23132 1 364 1.5E-186 T 21-04-2016 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 9.4E-31 T 21-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 SUPERFAMILY SSF56059 140 354 3.89E-60 T 21-04-2016 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 SUPERFAMILY SSF52440 3 139 1.92E-36 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Gene3D G3DSA:3.40.50.20 1 129 4.4E-36 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 21-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 PANTHER PTHR23132:SF8 1 364 1.5E-186 T 21-04-2016 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Gene3D G3DSA:3.30.470.20 224 361 2.4E-52 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Gene3D G3DSA:3.30.1490.20 157 223 4.7E-26 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.0E-119 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 PIRSF PIRSF039102 1 359 1.9E-138 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.684 T 21-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0365 fd27d74074509d0a75cb4a38d83d2ec0 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 6.9E-82 T 21-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_4147 e792f43af49931f24d2c367a41211479 463 Pfam PF07690 Major Facilitator Superfamily 35 397 3.4E-33 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4147 e792f43af49931f24d2c367a41211479 463 PANTHER PTHR11662:SF244 1 460 1.3E-291 T 21-04-2016 SDY_4147 e792f43af49931f24d2c367a41211479 463 PANTHER PTHR11662 1 460 1.3E-291 T 21-04-2016 SDY_4147 e792f43af49931f24d2c367a41211479 463 Gene3D G3DSA:1.20.1250.20 30 231 2.7E-33 T 21-04-2016 SDY_4147 e792f43af49931f24d2c367a41211479 463 Gene3D G3DSA:1.20.1250.20 252 456 9.2E-30 T 21-04-2016 SDY_4147 e792f43af49931f24d2c367a41211479 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.2E-144 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_4147 e792f43af49931f24d2c367a41211479 463 SUPERFAMILY SSF103473 18 451 1.57E-57 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4147 e792f43af49931f24d2c367a41211479 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 SDY_4147 e792f43af49931f24d2c367a41211479 463 PIRSF PIRSF002808 9 461 1.6E-100 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_1151 abf17d08344fe635327f09a83e238b26 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 3.9E-107 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like SDY_1151 abf17d08344fe635327f09a83e238b26 246 Pfam PF01709 Transcriptional regulator 5 235 1.2E-93 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like SDY_1151 abf17d08344fe635327f09a83e238b26 246 Gene3D G3DSA:3.30.70.980 135 204 1.9E-30 T 21-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SDY_1151 abf17d08344fe635327f09a83e238b26 246 SUPERFAMILY SSF75625 3 244 2.22E-97 T 21-04-2016 IPR029072 YebC-like SDY_1151 abf17d08344fe635327f09a83e238b26 246 Gene3D G3DSA:3.30.1270.10 211 245 3.5E-42 T 21-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SDY_1151 abf17d08344fe635327f09a83e238b26 246 Gene3D G3DSA:3.30.1270.10 82 134 3.5E-42 T 21-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SDY_1151 abf17d08344fe635327f09a83e238b26 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.65 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like SDY_1151 abf17d08344fe635327f09a83e238b26 246 PANTHER PTHR12532 1 240 1.9E-120 T 21-04-2016 IPR002876 Transcriptional regulator TACO1-like SDY_1151 abf17d08344fe635327f09a83e238b26 246 Gene3D G3DSA:1.10.10.200 1 79 1.4E-34 T 21-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.2E-29 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.312 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:1.10.287.180 1 75 8.8E-36 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:3.10.50.30 80 157 5.0E-33 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 PIRSF PIRSF006092 1 158 5.6E-56 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF46557 3 78 2.35E-29 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 7.7E-61 T 21-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF54534 81 157 4.05E-25 T 21-04-2016 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 PANTHER PTHR30437 1 157 1.2E-77 T 21-04-2016 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SDY_3362 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.9E-32 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PANTHER PTHR24322 199 231 3.2E-59 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PANTHER PTHR24322 54 183 3.2E-59 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 Gene3D G3DSA:3.40.50.720 45 292 4.0E-75 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 3.9E-32 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 6.2E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 6.2E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 6.2E-5 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 SUPERFAMILY SSF51735 48 293 7.3E-74 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 6.2E-58 T 21-04-2016 SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PANTHER PTHR24322:SF399 199 231 3.2E-59 T 21-04-2016 SDY_3069 ffef9a263a908063e8ccf7e6ef319141 294 PANTHER PTHR24322:SF399 54 183 3.2E-59 T 21-04-2016 SDY_4364 dc6ca4c611085c9a79e4d22072dd7d5f 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 148 7.6E-32 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_4364 dc6ca4c611085c9a79e4d22072dd7d5f 154 SUPERFAMILY SSF55804 10 148 1.19E-34 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_4364 dc6ca4c611085c9a79e4d22072dd7d5f 154 PANTHER PTHR30505 1 151 1.8E-93 T 21-04-2016 SDY_4364 dc6ca4c611085c9a79e4d22072dd7d5f 154 Gene3D G3DSA:3.40.930.10 8 150 3.4E-51 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_4364 dc6ca4c611085c9a79e4d22072dd7d5f 154 PANTHER PTHR30505:SF10 1 151 1.8E-93 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:3.40.50.2300 524 648 6.3E-32 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PIRSF PIRSF003182 1 778 0.0 T 21-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SMART SM00388 282 347 5.6E-19 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SUPERFAMILY SSF47226 661 773 7.98E-28 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SUPERFAMILY SSF52172 526 647 1.99E-27 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SMART SM00091 155 221 4.3E-7 T 21-04-2016 IPR000014 PAS domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SMART SM00073 675 772 6.6E-23 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Pfam PF01627 Hpt domain 686 760 4.5E-10 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:3.30.565.10 348 506 9.4E-46 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.2E-30 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.0E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.0E-14 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PANTHER PTHR24423 4 95 0.0 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PANTHER PTHR24423 153 677 0.0 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Pfam PF00072 Response regulator receiver domain 528 639 5.8E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PANTHER PTHR24423:SF476 4 95 0.0 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 PANTHER PTHR24423:SF476 153 677 0.0 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SMART SM00387 394 507 2.0E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:1.10.287.970 1 89 3.3E-41 T 21-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SUPERFAMILY SSF47384 269 347 3.92E-17 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Pfam PF00989 PAS fold 156 266 1.1E-17 T 21-04-2016 IPR013767 PAS fold GO:0006355 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:1.20.120.160 676 776 6.6E-35 T 21-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SUPERFAMILY SSF55874 336 503 3.41E-43 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SMART SM00448 526 639 7.9E-26 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Gene3D G3DSA:3.30.450.20 141 267 3.7E-20 T 21-04-2016 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.4E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.5E-13 T 21-04-2016 IPR000014 PAS domain SDY_3391 7fa0230fbc05bf97e50299e31d223068 778 SUPERFAMILY SSF55785 140 267 3.49E-20 T 21-04-2016 IPR000014 PAS domain SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-5 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 SUPERFAMILY SSF53850 90 297 4.81E-46 T 21-04-2016 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 Pfam PF03466 LysR substrate binding domain 89 293 3.4E-44 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.7E-20 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 SUPERFAMILY SSF46785 6 113 7.57E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 Gene3D G3DSA:3.40.190.10 180 258 2.7E-19 T 21-04-2016 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 PANTHER PTHR30126 3 297 1.9E-155 T 21-04-2016 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 PANTHER PTHR30126:SF15 3 297 1.9E-155 T 21-04-2016 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 Gene3D G3DSA:3.40.190.10 93 179 1.2E-24 T 21-04-2016 SDY_0227 2aaf485b5c3f6e94fc1c3c6c0d4a4c51 304 Gene3D G3DSA:1.10.10.10 5 84 4.3E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PANTHER PTHR30483:SF16 1 376 1.1E-231 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 SUPERFAMILY SSF53822 43 377 8.41E-89 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PANTHER PTHR30483 1 376 1.1E-231 T 21-04-2016 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 Pfam PF13458 Periplasmic binding protein 45 363 3.0E-56 T 21-04-2016 IPR028081 Leucine-binding protein domain SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 296 309 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 346 361 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 273 291 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 83 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 104 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 107 117 6.4E-69 T 21-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SDY_3611 809c60cd8554a35d46a5ef8f2c7c8bb2 386 Gene3D G3DSA:3.40.50.2300 44 243 2.0E-65 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 Gene3D G3DSA:1.10.8.260 271 322 6.2E-25 T 21-04-2016 IPR023166 HI0933 insert-like domain SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 SUPERFAMILY SSF51905 337 394 1.52E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 SUPERFAMILY SSF51905 3 188 1.52E-58 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PANTHER PTHR10617:SF103 330 396 5.6E-138 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 Gene3D G3DSA:3.50.50.60 3 186 3.2E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 Gene3D G3DSA:3.50.50.60 339 394 3.2E-52 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 Gene3D G3DSA:2.40.30.10 188 270 1.2E-28 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PANTHER PTHR10617 330 396 5.6E-138 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 Pfam PF03486 HI0933-like protein 5 392 3.4E-155 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 SUPERFAMILY SSF160996 190 338 8.37E-43 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PANTHER PTHR10617:SF103 2 286 5.6E-138 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PANTHER PTHR10617 2 286 5.6E-138 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.4E-5 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 6.4E-5 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.4E-5 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 7.6E-7 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 7.6E-7 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.6E-7 T 21-04-2016 SDY_3570 4caabb4a7ce0454a3ec4cd2e9824f272 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 3.2E-128 T 21-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 249 6.0E-12 T 21-04-2016 IPR000014 PAS domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 Gene3D G3DSA:3.30.70.270 254 321 1.0E-17 T 21-04-2016 SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 320 1.0E-17 T 21-04-2016 IPR000160 GGDEF domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 SUPERFAMILY SSF55785 148 250 2.26E-14 T 21-04-2016 IPR000014 PAS domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 SMART SM00267 242 324 0.0023 T 21-04-2016 IPR000160 GGDEF domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 Gene3D G3DSA:3.30.450.20 126 240 8.0E-11 T 21-04-2016 SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 SUPERFAMILY SSF55073 258 321 4.94E-15 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 321 5.5E-19 T 21-04-2016 IPR000160 GGDEF domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 SMART SM00091 129 198 0.031 T 21-04-2016 IPR000014 PAS domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 SMART SM00091 3 70 2.9 T 21-04-2016 IPR000014 PAS domain SDY_1423 f7a344c0cac20fac61db55d65a8e1ba3 326 Pfam PF08448 PAS fold 142 244 2.6E-8 T 21-04-2016 IPR013656 PAS fold-4 SDY_3087 79bba5698fb175e8b349a3ac2c5b263b 234 SUPERFAMILY SSF52540 10 229 2.5E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3087 79bba5698fb175e8b349a3ac2c5b263b 234 Gene3D G3DSA:3.40.50.300 12 225 7.1E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683 1 316 0.0 T 21-04-2016 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 Gene3D G3DSA:3.40.50.300 961 1267 4.7E-98 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 SMART SM00843 1301 1366 4.4E-42 T 21-04-2016 IPR018541 FtsK gamma domain SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683:SF41 761 1365 0.0 T 21-04-2016 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 SUPERFAMILY SSF52540 961 1273 9.79E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683 761 1365 0.0 T 21-04-2016 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 Pfam PF01580 FtsK/SpoIIIE family 987 1200 2.6E-75 T 21-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 SUPERFAMILY SSF46785 1302 1365 4.81E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683 454 693 0.0 T 21-04-2016 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683:SF41 454 693 0.0 T 21-04-2016 SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.1E-41 T 21-04-2016 IPR025199 DNA translocase FtsK, 4TM region SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 Pfam PF09397 Ftsk gamma domain 1303 1363 2.0E-28 T 21-04-2016 IPR018541 FtsK gamma domain SDY_2371 59fa72d31fe2f11453c4a3b81cde182a 1368 PANTHER PTHR22683:SF41 1 316 0.0 T 21-04-2016 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 PANTHER PTHR18895 4 308 3.2E-192 T 21-04-2016 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 Gene3D G3DSA:1.10.8.10 15 106 1.0E-6 T 21-04-2016 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.722 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 304 4.7E-110 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.7E-139 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 PIRSF PIRSF037167 1 307 4.5E-151 T 21-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 PANTHER PTHR18895:SF66 4 308 3.2E-192 T 21-04-2016 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 Pfam PF05175 Methyltransferase small domain 132 215 2.6E-16 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 SUPERFAMILY SSF53335 15 293 2.76E-54 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_2530 53af758c8e3ba509dd52e8eb94c8d175 310 Gene3D G3DSA:3.40.50.150 108 289 3.1E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 SMART SM00938 4 105 4.1E-68 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PANTHER PTHR30115 1 112 1.0E-67 T 21-04-2016 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-51 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-44 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 21-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 21-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SDY_2743 8ceb698f0aa0b9491fc60d01c78bde64 112 PIRSF PIRSF039144 1 112 9.6E-58 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 SUPERFAMILY SSF56770 35 185 1.83E-65 T 21-04-2016 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.4E-22 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 PANTHER PTHR11995 2 216 9.1E-146 T 21-04-2016 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 PANTHER PTHR11995:SF14 2 216 9.1E-146 T 21-04-2016 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 Gene3D G3DSA:3.40.50.700 47 178 3.4E-32 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 4.3E-71 T 21-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.735 T 21-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SDY_2483 13adf393a0500093cffd6cb6e7814e85 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 21-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SDY_0927 f02c85ffe7784203e2291bb5cd740ffe 172 Pfam PF07977 FabA-like domain 29 158 4.1E-54 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SDY_0927 f02c85ffe7784203e2291bb5cd740ffe 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.705 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_0927 f02c85ffe7784203e2291bb5cd740ffe 172 SUPERFAMILY SSF54637 3 169 1.16E-55 T 21-04-2016 IPR029069 HotDog domain SDY_0927 f02c85ffe7784203e2291bb5cd740ffe 172 Gene3D G3DSA:3.10.129.10 2 169 8.8E-62 T 21-04-2016 IPR029069 HotDog domain SDY_0927 f02c85ffe7784203e2291bb5cd740ffe 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.1E-98 T 21-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_2618 cb259788890d812b71db663c73750b27 365 PANTHER PTHR24220:SF123 4 289 6.5E-144 T 21-04-2016 SDY_2618 cb259788890d812b71db663c73750b27 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2618 cb259788890d812b71db663c73750b27 365 Gene3D G3DSA:3.40.50.300 3 244 7.1E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2618 cb259788890d812b71db663c73750b27 365 SUPERFAMILY SSF50331 239 345 7.94E-14 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_2618 cb259788890d812b71db663c73750b27 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.9E-129 T 21-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 SDY_2618 cb259788890d812b71db663c73750b27 365 Pfam PF00005 ABC transporter 18 164 4.8E-38 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2618 cb259788890d812b71db663c73750b27 365 SMART SM00382 27 214 3.2E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2618 cb259788890d812b71db663c73750b27 365 Pfam PF12857 TOBE-like domain 289 339 4.0E-7 T 21-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 SDY_2618 cb259788890d812b71db663c73750b27 365 PANTHER PTHR24220 4 289 6.5E-144 T 21-04-2016 SDY_2618 cb259788890d812b71db663c73750b27 365 SUPERFAMILY SSF52540 3 244 9.13E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 PANTHER PTHR13929:SF0 1 306 4.8E-104 T 21-04-2016 SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 PANTHER PTHR13929 1 306 4.8E-104 T 21-04-2016 SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 8.0E-153 T 21-04-2016 SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.057 T 21-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 PIRSF PIRSF005355 1 306 2.0E-100 T 21-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 SDY_3807 cfd2e655881d686cc812ecb0dd7016c4 308 Pfam PF01040 UbiA prenyltransferase family 26 273 1.1E-37 T 21-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SDY_1973 451eb0ab172f6de5db3b6d9d86ca8e51 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 21.855 T 21-04-2016 IPR020907 PhoP/PhoQ regulator MgrB SDY_1973 451eb0ab172f6de5db3b6d9d86ca8e51 47 Pfam PF13998 MgrB protein 19 47 2.2E-17 T 21-04-2016 IPR020907 PhoP/PhoQ regulator MgrB SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 PANTHER PTHR10681:SF107 1 179 6.7E-81 T 21-04-2016 SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 Pfam PF08534 Redoxin 42 166 8.8E-23 T 21-04-2016 IPR013740 Redoxin GO:0016491 SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 SUPERFAMILY SSF52833 46 178 4.33E-40 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.1E-84 T 21-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 PANTHER PTHR10681 1 179 6.7E-81 T 21-04-2016 SDY_0883 e3e47bfcd80797607b29dc8738dff31d 185 Gene3D G3DSA:3.40.30.10 10 178 3.9E-41 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3213 c485483f40addd8ab6aa4db86794b019 449 SMART SM00387 348 449 2.6E-20 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 2.4E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 1.7E-7 T 21-04-2016 IPR013727 Two-component sensor kinase, N-terminal SDY_3213 c485483f40addd8ab6aa4db86794b019 449 SMART SM00388 236 302 1.7E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 SUPERFAMILY SSF55874 291 447 3.67E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 442 5.6E-16 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Gene3D G3DSA:1.10.287.130 231 298 8.6E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PANTHER PTHR24423:SF474 6 142 3.7E-154 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PANTHER PTHR24423:SF474 174 449 3.7E-154 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PANTHER PTHR24423 6 142 3.7E-154 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PANTHER PTHR24423 174 449 3.7E-154 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 SUPERFAMILY SSF47384 219 301 4.32E-15 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Gene3D G3DSA:1.20.5.1040 2 84 7.0E-27 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Gene3D G3DSA:1.20.5.1040 101 185 1.5E-33 T 21-04-2016 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 Gene3D G3DSA:3.30.565.10 312 448 7.2E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 3.5E-5 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3213 c485483f40addd8ab6aa4db86794b019 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 3.5E-5 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 60 73 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 184 205 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 29 47 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 263 282 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 73 90 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00690 Adhesin family signature 237 255 4.5E-42 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 233 250 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 54 72 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 29 50 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 184 201 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 73 92 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 255 273 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PRINTS PR00691 Adhesin B signature 210 228 2.8E-36 T 21-04-2016 IPR006129 Adhesin B GO:0007155 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.0E-73 T 21-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PANTHER PTHR30477 14 297 1.5E-150 T 21-04-2016 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 SUPERFAMILY SSF53807 25 298 8.34E-90 T 21-04-2016 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 Gene3D G3DSA:3.40.50.1980 177 298 3.1E-40 T 21-04-2016 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 Gene3D G3DSA:3.40.50.1980 22 176 9.0E-51 T 21-04-2016 SDY_1457 5e38020d74549e0f59fd8481edd6d3fb 304 PANTHER PTHR30477:SF12 14 297 1.5E-150 T 21-04-2016 SDY_2865 f67688070123945965b6071fe79306af 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 2.2E-20 T 21-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SDY_2865 f67688070123945965b6071fe79306af 143 PANTHER PTHR34846 26 142 2.2E-13 T 21-04-2016 SDY_2865 f67688070123945965b6071fe79306af 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 1.2E-15 T 21-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SDY_2865 f67688070123945965b6071fe79306af 143 Gene3D G3DSA:1.20.1290.10 8 143 7.7E-52 T 21-04-2016 IPR029032 AhpD-like SDY_2865 f67688070123945965b6071fe79306af 143 PANTHER PTHR34846:SF2 26 142 2.2E-13 T 21-04-2016 SDY_2865 f67688070123945965b6071fe79306af 143 SUPERFAMILY SSF69118 8 143 2.49E-43 T 21-04-2016 IPR029032 AhpD-like SDY_2943 3c895d55970b941c2165958720540ba7 253 SUPERFAMILY SSF64167 1 246 3.4E-83 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SDY_2943 3c895d55970b941c2165958720540ba7 253 PANTHER PTHR30457 1 247 1.2E-99 T 21-04-2016 SDY_2943 3c895d55970b941c2165958720540ba7 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 1.3E-79 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SDY_2943 3c895d55970b941c2165958720540ba7 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.116 T 21-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SDY_2943 3c895d55970b941c2165958720540ba7 253 Pfam PF01975 Survival protein SurE 3 180 5.1E-56 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SDY_2943 3c895d55970b941c2165958720540ba7 253 Gene3D G3DSA:3.40.1210.10 1 246 8.3E-85 T 21-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 635 1.6E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 SUPERFAMILY SSF51905 467 627 3.29E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 SUPERFAMILY SSF51395 1 362 1.52E-108 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PANTHER PTHR22893:SF25 1 417 2.2E-250 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 2.8E-6 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 2.8E-6 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 2.0E-105 T 21-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 1.2E-11 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.2E-11 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 1.2E-11 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 Gene3D G3DSA:3.50.50.60 361 463 3.0E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 Gene3D G3DSA:3.50.50.60 469 625 3.9E-51 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 SUPERFAMILY SSF51971 333 519 2.71E-42 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 PANTHER PTHR22893 1 417 2.2E-250 T 21-04-2016 SDY_3265 fbaef8b9c13a64498499984f7f8f3af6 672 Gene3D G3DSA:3.20.20.70 3 360 5.7E-120 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3403 f63d7ff2198283127de3aa46559fc036 99 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 98 2.1E-27 T 21-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 SDY_3403 f63d7ff2198283127de3aa46559fc036 99 PANTHER PTHR42002 1 99 2.1E-71 T 21-04-2016 SDY_3403 f63d7ff2198283127de3aa46559fc036 99 PANTHER PTHR42002:SF1 1 99 2.1E-71 T 21-04-2016 SDY_3900 123fe750764f55410b503493a6045d6b 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 21-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 SUPERFAMILY SSF53901 1 259 6.76E-78 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 21-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 Gene3D G3DSA:3.40.47.10 143 183 1.1E-57 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 Gene3D G3DSA:3.40.47.10 268 386 1.1E-57 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 2.1E-86 T 21-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 8.9E-244 T 21-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3900 123fe750764f55410b503493a6045d6b 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 21-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SDY_3900 123fe750764f55410b503493a6045d6b 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.082 T 21-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_3900 123fe750764f55410b503493a6045d6b 387 PIRSF PIRSF000429 1 387 9.9E-131 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 Gene3D G3DSA:3.40.47.10 184 267 1.8E-64 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 Gene3D G3DSA:3.40.47.10 4 126 1.8E-64 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.1E-49 T 21-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 SUPERFAMILY SSF53901 262 386 1.23E-42 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_3900 123fe750764f55410b503493a6045d6b 387 PANTHER PTHR18919:SF69 1 387 9.6E-205 T 21-04-2016 SDY_3900 123fe750764f55410b503493a6045d6b 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.8E-145 T 21-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SDY_3900 123fe750764f55410b503493a6045d6b 387 PANTHER PTHR18919 1 387 9.6E-205 T 21-04-2016 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 Pfam PF08544 GHMP kinases C terminal 213 263 2.2E-6 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 1.3E-10 T 21-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.638 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 Gene3D G3DSA:3.30.70.890 166 281 1.6E-45 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 Gene3D G3DSA:3.30.230.10 4 163 1.7E-54 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 PIRSF PIRSF010376 1 283 1.5E-85 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 SUPERFAMILY SSF54211 2 162 2.66E-49 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 282 9.7E-125 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 PANTHER PTHR20861:SF2 1 280 2.6E-110 T 21-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 PANTHER PTHR20861 1 280 2.6E-110 T 21-04-2016 SDY_1257 a539861b9148ea206ae2f4b2aa4b4827 283 SUPERFAMILY SSF55060 164 281 6.98E-37 T 21-04-2016 IPR013750 GHMP kinase, C-terminal domain SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Gene3D G3DSA:3.30.9.10 212 314 6.7E-53 T 21-04-2016 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Gene3D G3DSA:3.30.9.10 59 146 6.7E-53 T 21-04-2016 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 372 75.644 T 21-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 PANTHER PTHR10961 1 372 5.1E-114 T 21-04-2016 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Pfam PF01266 FAD dependent oxidoreductase 4 352 3.6E-44 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Gene3D G3DSA:3.50.50.60 317 372 1.9E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Gene3D G3DSA:3.50.50.60 147 209 1.9E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 Gene3D G3DSA:3.50.50.60 1 57 1.9E-56 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 PANTHER PTHR10961:SF7 1 372 5.1E-114 T 21-04-2016 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 SUPERFAMILY SSF51905 2 217 3.67E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 SUPERFAMILY SSF51905 314 371 3.67E-48 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2096 c2e2aad67dbf54f96759b1540c82e277 372 SUPERFAMILY SSF54373 213 314 1.57E-16 T 21-04-2016 SDY_2398a a525d9472235330bffffbe8cbdfa01d9 125 Pfam PF03400 IS1 transposase 1 125 3.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2398a a525d9472235330bffffbe8cbdfa01d9 125 PANTHER PTHR33293 1 124 3.5E-42 T 21-04-2016 SDY_4512 a525d9472235330bffffbe8cbdfa01d9 125 Pfam PF03400 IS1 transposase 1 125 3.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4512 a525d9472235330bffffbe8cbdfa01d9 125 PANTHER PTHR33293 1 124 3.5E-42 T 21-04-2016 SDY_3883 a525d9472235330bffffbe8cbdfa01d9 125 Pfam PF03400 IS1 transposase 1 125 3.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3883 a525d9472235330bffffbe8cbdfa01d9 125 PANTHER PTHR33293 1 124 3.5E-42 T 21-04-2016 SDY_4386 a525d9472235330bffffbe8cbdfa01d9 125 Pfam PF03400 IS1 transposase 1 125 3.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4386 a525d9472235330bffffbe8cbdfa01d9 125 PANTHER PTHR33293 1 124 3.5E-42 T 21-04-2016 SDY_2092 f01bd6283a2f1252909108286d84afae 81 PANTHER PTHR36572:SF2 1 81 5.1E-45 T 21-04-2016 SDY_2092 f01bd6283a2f1252909108286d84afae 81 Gene3D G3DSA:3.30.910.10 1 80 4.9E-34 T 21-04-2016 IPR010391 DNA damage-inducible protein DinI-like SDY_2092 f01bd6283a2f1252909108286d84afae 81 PANTHER PTHR36572 1 81 5.1E-45 T 21-04-2016 SDY_2092 f01bd6283a2f1252909108286d84afae 81 Pfam PF06183 DinI-like family 14 78 4.1E-27 T 21-04-2016 IPR010391 DNA damage-inducible protein DinI-like SDY_2092 f01bd6283a2f1252909108286d84afae 81 SUPERFAMILY SSF54857 1 80 1.44E-27 T 21-04-2016 IPR010391 DNA damage-inducible protein DinI-like SDY_4228 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4228 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4228 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4228 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3288 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3288 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3288 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3288 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3331 5551fb514d463939ebf5f22132c0852d 226 PANTHER PTHR14097:SF7 8 226 1.3E-73 T 21-04-2016 SDY_3331 5551fb514d463939ebf5f22132c0852d 226 Gene3D G3DSA:3.40.50.720 15 224 1.9E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3331 5551fb514d463939ebf5f22132c0852d 226 SMART SM00859 18 118 0.0058 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_3331 5551fb514d463939ebf5f22132c0852d 226 SUPERFAMILY SSF51735 16 215 2.47E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3331 5551fb514d463939ebf5f22132c0852d 226 Pfam PF13460 NAD(P)H-binding 23 205 4.8E-10 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3331 5551fb514d463939ebf5f22132c0852d 226 PANTHER PTHR14097 8 226 1.3E-73 T 21-04-2016 SDY_2214 e8604b40ff95a1001ebf4d987d1fda76 344 Gene3D G3DSA:3.30.1890.10 270 313 2.7E-59 T 21-04-2016 SDY_2214 e8604b40ff95a1001ebf4d987d1fda76 344 Gene3D G3DSA:3.30.1890.10 71 205 2.7E-59 T 21-04-2016 SDY_2214 e8604b40ff95a1001ebf4d987d1fda76 344 SUPERFAMILY SSF160355 73 311 1.29E-70 T 21-04-2016 SDY_2214 e8604b40ff95a1001ebf4d987d1fda76 344 Pfam PF02706 Chain length determinant protein 35 173 5.1E-19 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 2.9E-32 T 21-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Gene3D G3DSA:1.10.8.60 167 242 1.1E-33 T 21-04-2016 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 SUPERFAMILY SSF52540 35 221 2.1E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0449 1434184494d8876a08c94d9bbee21b86 643 PANTHER PTHR11669:SF0 1 435 6.6E-194 T 21-04-2016 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Gene3D G3DSA:1.20.272.10 243 361 5.6E-49 T 21-04-2016 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 498 3.8E-21 T 21-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.0E-42 T 21-04-2016 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 SUPERFAMILY SSF48019 243 366 2.55E-36 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 PANTHER PTHR11669 1 435 6.6E-194 T 21-04-2016 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 SMART SM00382 37 178 1.1E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0449 1434184494d8876a08c94d9bbee21b86 643 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 8.2E-134 T 21-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Gene3D G3DSA:3.40.50.300 15 166 8.0E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0449 1434184494d8876a08c94d9bbee21b86 643 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 500 640 7.0E-58 T 21-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Gene3D G3DSA:3.90.700.10 234 352 3.6E-37 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_4398 3c33ff73b8389770d67016a972380a91 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 21-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 21-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.0E-38 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Gene3D G3DSA:4.10.80.40 543 577 5.5E-18 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Pfam PF00890 FAD binding domain 7 397 1.3E-115 T 21-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SDY_4398 3c33ff73b8389770d67016a972380a91 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.5E-5 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-5 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 SUPERFAMILY SSF56425 227 358 6.88E-43 T 21-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SDY_4398 3c33ff73b8389770d67016a972380a91 602 SUPERFAMILY SSF46977 444 590 3.01E-46 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 4.7E-250 T 21-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PANTHER PTHR11632 1 584 0.0 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 SUPERFAMILY SSF51905 361 415 2.96E-71 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 SUPERFAMILY SSF51905 3 250 2.96E-71 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PIRSF PIRSF000171 1 576 1.7E-42 T 21-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SDY_4398 3c33ff73b8389770d67016a972380a91 602 Gene3D G3DSA:1.20.58.100 426 537 1.5E-38 T 21-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PANTHER PTHR11632:SF50 1 584 0.0 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.0E-10 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.0E-10 T 21-04-2016 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Gene3D G3DSA:3.50.50.60 353 416 7.5E-106 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4398 3c33ff73b8389770d67016a972380a91 602 Gene3D G3DSA:3.50.50.60 3 233 7.5E-106 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 87.131 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 Gene3D G3DSA:3.40.50.150 184 316 5.2E-15 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 PANTHER PTHR37524:SF2 1 360 2.4E-235 T 21-04-2016 SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 SUPERFAMILY SSF53335 184 296 3.09E-13 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 PANTHER PTHR37524 1 360 2.4E-235 T 21-04-2016 SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 3.2E-8 T 21-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SDY_3024 fb7764f24053008a71ec537fb9453a8d 366 PIRSF PIRSF028774 1 360 7.2E-192 T 21-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 PANTHER PTHR30363:SF1 1 252 2.3E-126 T 21-04-2016 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 Gene3D G3DSA:1.10.10.10 1 58 3.1E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3652 06bc8aafa080776910698cca6a27fab3 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 8.0E-56 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_3652 06bc8aafa080776910698cca6a27fab3 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 Gene3D G3DSA:3.30.750.70 72 153 3.2E-17 T 21-04-2016 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.8E-26 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 SUPERFAMILY SSF100950 73 233 9.21E-31 T 21-04-2016 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 SUPERFAMILY SSF46785 3 76 1.43E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3652 06bc8aafa080776910698cca6a27fab3 252 SMART SM01134 72 233 5.1E-74 T 21-04-2016 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 SMART SM00420 6 58 1.0E-28 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.8E-14 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.8E-14 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3652 06bc8aafa080776910698cca6a27fab3 252 PANTHER PTHR30363 1 252 2.3E-126 T 21-04-2016 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 PANTHER PTHR23522 11 434 0.0 T 21-04-2016 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 TIGRFAM TIGR00889 2A0110: nucleoside transporter 17 433 2.0E-225 T 21-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 SUPERFAMILY SSF103473 24 422 1.96E-32 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 Pfam PF03825 Nucleoside H+ symporter 17 422 6.3E-189 T 21-04-2016 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 PANTHER PTHR23522:SF2 11 434 0.0 T 21-04-2016 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 Gene3D G3DSA:1.20.1250.20 216 421 1.8E-18 T 21-04-2016 SDY_3108 2895a34c76fc40e9dfcac0b84c34a36e 434 Gene3D G3DSA:1.20.1250.20 21 137 3.0E-8 T 21-04-2016 SDY_4123 26f7588494fa6385ee3915d255e14cb5 144 SUPERFAMILY SSF55729 6 137 6.58E-27 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4123 26f7588494fa6385ee3915d255e14cb5 144 PANTHER PTHR23091:SF230 1 134 1.3E-97 T 21-04-2016 SDY_4123 26f7588494fa6385ee3915d255e14cb5 144 Pfam PF00583 Acetyltransferase (GNAT) family 54 134 1.5E-14 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_4123 26f7588494fa6385ee3915d255e14cb5 144 Gene3D G3DSA:3.40.630.30 3 143 1.6E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4123 26f7588494fa6385ee3915d255e14cb5 144 PANTHER PTHR23091 1 134 1.3E-97 T 21-04-2016 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 SMART SM00855 3 157 5.7E-24 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 Gene3D G3DSA:3.40.50.1240 2 209 8.1E-60 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 SUPERFAMILY SSF53254 1 208 8.25E-57 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 PANTHER PTHR23029:SF53 1 215 4.6E-159 T 21-04-2016 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 PANTHER PTHR23029 1 215 4.6E-159 T 21-04-2016 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 64.869 T 21-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 21-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SDY_4656 ddb1fce23901a1c11c76d226bd8d0ece 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 2.5E-56 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SDY_0682 9e441c32db8af40efbbc54336b0dd9dc 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.8E-15 T 21-04-2016 IPR012994 Membrane bound YbgT-like SDY_0682 9e441c32db8af40efbbc54336b0dd9dc 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.4E-20 T 21-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 SDY_3416 b9b689c044b89567a98d843fd7095845 655 PANTHER PTHR30509:SF10 7 255 0.0 T 21-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 SDY_3416 b9b689c044b89567a98d843fd7095845 655 PANTHER PTHR30509:SF10 305 638 0.0 T 21-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 SDY_3416 b9b689c044b89567a98d843fd7095845 655 Pfam PF04632 Fusaric acid resistance protein family 11 651 7.7E-165 T 21-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 SDY_3416 b9b689c044b89567a98d843fd7095845 655 PANTHER PTHR30509 7 255 0.0 T 21-04-2016 SDY_3416 b9b689c044b89567a98d843fd7095845 655 PANTHER PTHR30509 305 638 0.0 T 21-04-2016 SDY_3416 b9b689c044b89567a98d843fd7095845 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.689 T 21-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 2.7E-38 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 9.0E-93 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 SUPERFAMILY SSF48179 162 268 3.74E-37 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 4.7E-25 T 21-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.835 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 PANTHER PTHR11645 1 269 5.7E-124 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 PANTHER PTHR11645:SF0 1 269 5.7E-124 T 21-04-2016 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 SUPERFAMILY SSF51735 3 159 1.47E-38 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 Gene3D G3DSA:3.40.50.720 1 159 3.7E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 PIRSF PIRSF000193 2 269 5.9E-100 T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 Gene3D G3DSA:1.10.3730.10 162 266 1.2E-42 T 21-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_0356 7e8d11ad7992b44bc286fd93e61dbe54 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 21-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SDY_3070 81d1e615b204271cabc485977ff9196e 164 PANTHER PTHR38596:SF1 1 164 1.2E-100 T 21-04-2016 SDY_3070 81d1e615b204271cabc485977ff9196e 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.6E-35 T 21-04-2016 IPR005134 Uncharacterised protein family UPF0114 SDY_3070 81d1e615b204271cabc485977ff9196e 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.281 T 21-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 SDY_3070 81d1e615b204271cabc485977ff9196e 164 PANTHER PTHR38596 1 164 1.2E-100 T 21-04-2016 SDY_3070 81d1e615b204271cabc485977ff9196e 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 1.5E-80 T 21-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 9.8E-167 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.428 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 SUPERFAMILY SSF56300 1 259 5.99E-57 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 Gene3D G3DSA:3.60.21.10 169 267 6.2E-55 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 Gene3D G3DSA:3.60.21.10 1 132 6.2E-55 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 PANTHER PTHR24032 1 276 1.1E-182 T 21-04-2016 SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 153 3.7E-14 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 PANTHER PTHR24032:SF27 1 276 1.1E-182 T 21-04-2016 SDY_0074 159bd3eae98d3b8b981a107cfe600fed 282 PIRSF PIRSF000903 1 275 2.3E-124 T 21-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 PANTHER PTHR11751:SF419 11 415 2.6E-190 T 21-04-2016 SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 SUPERFAMILY SSF53383 26 411 1.11E-57 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 PANTHER PTHR11751 11 415 2.6E-190 T 21-04-2016 SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 Pfam PF00155 Aminotransferase class I and II 165 391 7.9E-21 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 Gene3D G3DSA:3.40.640.10 61 266 1.8E-39 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3707 2aa96f0a1d4b0a06a9fd1093f2d55b19 417 Gene3D G3DSA:3.90.1150.10 267 410 1.3E-15 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 PANTHER PTHR30566 21 343 5.3E-102 T 21-04-2016 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 SUPERFAMILY SSF82861 79 160 1.96E-10 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 Pfam PF00924 Mechanosensitive ion channel 120 323 1.4E-63 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 Gene3D G3DSA:2.30.30.60 178 228 4.5E-15 T 21-04-2016 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 SUPERFAMILY SSF82689 231 335 8.37E-22 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 Gene3D G3DSA:3.30.70.100 233 321 2.7E-16 T 21-04-2016 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SDY_1410 e821d344135c556a25ae1f39e22fb725 343 SUPERFAMILY SSF50182 162 228 1.77E-17 T 21-04-2016 IPR010920 LSM domain SDY_2896 3b61a213ace8ecc52df100debcf65333 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 1.1E-63 T 21-04-2016 IPR008136 CinA, C-terminal SDY_2896 3b61a213ace8ecc52df100debcf65333 165 SUPERFAMILY SSF142433 3 161 2.09E-59 T 21-04-2016 IPR008136 CinA, C-terminal SDY_2896 3b61a213ace8ecc52df100debcf65333 165 PANTHER PTHR13939 1 161 9.7E-84 T 21-04-2016 SDY_2896 3b61a213ace8ecc52df100debcf65333 165 Gene3D G3DSA:3.90.950.20 3 163 2.6E-62 T 21-04-2016 IPR008136 CinA, C-terminal SDY_2896 3b61a213ace8ecc52df100debcf65333 165 Pfam PF02464 Competence-damaged protein 8 160 3.3E-60 T 21-04-2016 IPR008136 CinA, C-terminal SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 SUPERFAMILY SSF81296 2 124 1.18E-47 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 Gene3D G3DSA:2.60.40.10 1 118 8.7E-54 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 Gene3D G3DSA:3.40.50.1820 120 369 3.3E-70 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 Pfam PF11806 Domain of unknown function (DUF3327) 3 129 1.6E-45 T 21-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 PANTHER PTHR10907 43 328 1.0E-118 T 21-04-2016 SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 PANTHER PTHR10907:SF55 43 328 1.0E-118 T 21-04-2016 SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 Pfam PF00756 Putative esterase 146 365 1.0E-48 T 21-04-2016 IPR000801 Putative esterase SDY_0513 bf281e651097cc2fcfeccf5b3659e036 374 SUPERFAMILY SSF53474 129 367 9.48E-48 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0738 9ffdf18182857a96a2180abdb7226f77 281 PANTHER PTHR30222 15 279 6.1E-91 T 21-04-2016 SDY_0738 9ffdf18182857a96a2180abdb7226f77 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 2.3E-14 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0738 9ffdf18182857a96a2180abdb7226f77 281 SUPERFAMILY SSF161098 8 266 1.12E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0738 9ffdf18182857a96a2180abdb7226f77 281 Gene3D G3DSA:1.10.3720.10 11 270 2.3E-57 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0738 9ffdf18182857a96a2180abdb7226f77 281 PANTHER PTHR30222:SF1 15 279 6.1E-91 T 21-04-2016 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 Pfam PF00825 Ribonuclease P 6 111 1.8E-32 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 21-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.951 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 105 3.0E-45 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 Gene3D G3DSA:3.30.230.10 5 116 3.2E-34 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 7.5E-38 T 21-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 SUPERFAMILY SSF54211 5 115 2.48E-31 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4186 344f447b7988c3072dc40e0fc1b81a54 119 PANTHER PTHR33992 2 116 5.6E-43 T 21-04-2016 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Gene3D G3DSA:1.10.1040.10 361 481 5.7E-16 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 SUPERFAMILY SSF51735 30 209 6.23E-58 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 38.768 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 PANTHER PTHR21371 1 489 1.7E-226 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.7E-58 T 21-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 SUPERFAMILY SSF48179 349 484 3.23E-40 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Gene3D G3DSA:3.40.50.720 1 201 2.7E-76 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 1.3E-21 T 21-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.4E-28 T 21-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.0E-137 T 21-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3974 adefa4c2b55d3d2e479af00393e2c000 491 SUPERFAMILY SSF48179 210 343 1.65E-41 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_4442 9de8c859930b5dd0da696c9e2c30583b 112 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 112 42.162 T 21-04-2016 IPR023700 Divalent cation tolerance protein CutA, bacteria GO:0005507|GO:0005737 SDY_4442 9de8c859930b5dd0da696c9e2c30583b 112 SUPERFAMILY SSF54913 11 111 4.08E-35 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SDY_4442 9de8c859930b5dd0da696c9e2c30583b 112 PANTHER PTHR23419 11 112 6.1E-47 T 21-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SDY_4442 9de8c859930b5dd0da696c9e2c30583b 112 Pfam PF03091 CutA1 divalent ion tolerance protein 12 109 5.1E-34 T 21-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SDY_4442 9de8c859930b5dd0da696c9e2c30583b 112 Gene3D G3DSA:3.30.70.830 3 111 1.5E-40 T 21-04-2016 SDY_4454 0edaa50d6015aa7ad3286f11f9d528ea 81 Gene3D G3DSA:3.30.1910.10 14 78 9.5E-37 T 21-04-2016 SDY_4454 0edaa50d6015aa7ad3286f11f9d528ea 81 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 14 76 3.0E-30 T 21-04-2016 IPR009491 Protein of unknown function DUF1107 SDY_4454 0edaa50d6015aa7ad3286f11f9d528ea 81 Pfam PF06526 Protein of unknown function (DUF1107) 14 76 2.1E-29 T 21-04-2016 IPR009491 Protein of unknown function DUF1107 SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 PANTHER PTHR23091:SF249 9 194 1.5E-122 T 21-04-2016 SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 4.6E-49 T 21-04-2016 IPR012660 Thioesterase, putative SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 SUPERFAMILY SSF54637 171 313 8.25E-41 T 21-04-2016 IPR029069 HotDog domain SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 Pfam PF13673 Acetyltransferase (GNAT) domain 56 145 2.7E-13 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 SUPERFAMILY SSF55729 15 162 2.53E-29 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 Gene3D G3DSA:3.40.630.30 24 160 3.7E-26 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 5.9E-50 T 21-04-2016 IPR012660 Thioesterase, putative SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 Gene3D G3DSA:3.10.129.10 161 315 4.2E-65 T 21-04-2016 IPR029069 HotDog domain SDY_3855 244517a5d5f0568c11e59ae6252377a7 329 PANTHER PTHR23091 9 194 1.5E-122 T 21-04-2016 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 SUPERFAMILY SSF46785 5 143 2.73E-30 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 Gene3D G3DSA:1.10.10.10 13 142 9.5E-36 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 21-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 SMART SM00347 31 132 3.9E-34 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 Pfam PF01047 MarR family 38 96 4.1E-18 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PANTHER PTHR33164:SF4 6 143 1.4E-44 T 21-04-2016 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.2E-25 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 3.2E-25 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.2E-25 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.2E-25 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_1597 6f749eb022a676f64f3d6c1a46e2c37a 144 PANTHER PTHR33164 6 143 1.4E-44 T 21-04-2016 SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 SUPERFAMILY SSF52218 2 172 2.17E-30 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 PANTHER PTHR38030 1 181 5.3E-114 T 21-04-2016 SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 Pfam PF12724 Flavodoxin domain 4 152 2.1E-53 T 21-04-2016 IPR026816 Flavodoxin domain SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 PANTHER PTHR38030:SF2 1 181 5.3E-114 T 21-04-2016 SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 105 175 7.9E-28 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3895 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 2 73 7.9E-28 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 Pfam PF13460 NAD(P)H-binding 9 155 1.9E-16 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 PANTHER PTHR10366:SF439 4 238 2.2E-193 T 21-04-2016 SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 PANTHER PTHR10366 259 318 2.2E-193 T 21-04-2016 SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 Gene3D G3DSA:3.40.50.720 3 221 2.9E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 PANTHER PTHR10366 4 238 2.2E-193 T 21-04-2016 SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 PANTHER PTHR10366:SF439 259 318 2.2E-193 T 21-04-2016 SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 SUPERFAMILY SSF55961 333 472 6.04E-5 T 21-04-2016 SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 SUPERFAMILY SSF51735 3 294 6.27E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2394 f6aa5e7b6c6450e52ed8a89db63cf116 476 Pfam PF11066 Protein of unknown function (DUF2867) 331 463 4.4E-12 T 21-04-2016 IPR021295 Protein of unknown function DUF2867 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 Gene3D G3DSA:1.10.10.60 8 57 6.1E-21 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 62 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.4E-5 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.4E-5 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 PANTHER PTHR30328 4 224 4.0E-61 T 21-04-2016 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 Gene3D G3DSA:1.10.357.10 58 226 9.7E-75 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.0E-13 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 Pfam PF09209 Domain of unknown function (DUF1956) 100 222 1.6E-37 T 21-04-2016 IPR015292 Transcription regulator YbiH, C-terminal SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 SUPERFAMILY SSF48498 94 223 1.38E-36 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 PANTHER PTHR30328:SF8 4 224 4.0E-61 T 21-04-2016 SDY_0807 09ac175f72fcd09b1a7df66d4431cd5e 227 SUPERFAMILY SSF46689 8 86 6.16E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4571 492e31d7b836cdcfc5392f5dd7c66ad4 301 Pfam PF00665 Integrase core domain 124 243 1.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4571 492e31d7b836cdcfc5392f5dd7c66ad4 301 Gene3D G3DSA:3.30.420.10 119 282 9.3E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4571 492e31d7b836cdcfc5392f5dd7c66ad4 301 SUPERFAMILY SSF53098 121 292 3.04E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4571 492e31d7b836cdcfc5392f5dd7c66ad4 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_4307 492e31d7b836cdcfc5392f5dd7c66ad4 301 Pfam PF00665 Integrase core domain 124 243 1.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4307 492e31d7b836cdcfc5392f5dd7c66ad4 301 Gene3D G3DSA:3.30.420.10 119 282 9.3E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4307 492e31d7b836cdcfc5392f5dd7c66ad4 301 SUPERFAMILY SSF53098 121 292 3.04E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4307 492e31d7b836cdcfc5392f5dd7c66ad4 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305:SF6 529 799 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305:SF6 279 506 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305:SF6 1 260 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305:SF6 817 933 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305:SF6 1024 1087 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 425 463 8.6E-7 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 361 391 3.4E-5 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 637 674 1.5E-8 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 863 908 9.1E-8 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 575 611 2.8E-7 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 Pfam PF05593 RHS Repeat 535 568 4.9E-5 T 21-04-2016 IPR031325 RHS repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305 529 799 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305 279 506 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305 1 260 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305 817 933 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PANTHER PTHR32305 1024 1087 0.0 T 21-04-2016 SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 596 627 5.2E-4 T 21-04-2016 IPR006530 YD repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 575 612 1.7E-8 T 21-04-2016 IPR006530 YD repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 409 444 1.5E-4 T 21-04-2016 IPR006530 YD repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 451 482 0.002 T 21-04-2016 IPR006530 YD repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 637 678 5.8E-6 T 21-04-2016 IPR006530 YD repeat SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PRINTS PR00394 RHS protein signature 1023 1042 1.4E-19 T 21-04-2016 IPR001826 RHS protein SDY_0636 6bef959f67eb762fe8763c70e4b69267 1087 PRINTS PR00394 RHS protein signature 1061 1081 1.4E-19 T 21-04-2016 IPR001826 RHS protein SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.5E-6 T 21-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 9.0E-90 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 21-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Gene3D G3DSA:1.10.340.30 22 122 1.8E-33 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 PANTHER PTHR10359:SF18 5 210 2.2E-92 T 21-04-2016 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.146 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 PANTHER PTHR10359 5 210 2.2E-92 T 21-04-2016 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Gene3D G3DSA:1.10.1670.10 123 208 5.4E-36 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 21-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 SUPERFAMILY SSF48150 3 208 2.51E-73 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.2E-20 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 PIRSF PIRSF001435 1 210 4.8E-52 T 21-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 SMART SM00478 38 185 1.1E-53 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_1856 f50846e37d0f6d20ec5f09d4cda38399 211 SMART SM00525 186 206 1.4E-5 T 21-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SDY_4752 bd4c17a93905bfbee01586798dc9bef0 90 Pfam PF12759 InsA C-terminal domain 42 87 3.9E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4752 bd4c17a93905bfbee01586798dc9bef0 90 PANTHER PTHR33293:SF2 1 89 6.3E-20 T 21-04-2016 SDY_4752 bd4c17a93905bfbee01586798dc9bef0 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4752 bd4c17a93905bfbee01586798dc9bef0 90 PANTHER PTHR33293 1 89 6.3E-20 T 21-04-2016 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 TIGRFAM TIGR00077 lspA: signal peptidase II 1 164 4.2E-61 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 PANTHER PTHR33695:SF1 9 163 2.1E-59 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.026 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 Pfam PF01252 Signal peptidase (SPase) II 16 155 4.9E-35 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 PANTHER PTHR33695 9 163 2.1E-59 T 21-04-2016 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.5E-19 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.5E-19 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_0049 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.5E-19 T 21-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 PANTHER PTHR11361 2 852 0.0 T 21-04-2016 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SUPERFAMILY SSF48334 270 566 2.62E-90 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Gene3D G3DSA:3.40.1170.10 5 123 2.6E-52 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Pfam PF05190 MutS family domain IV 428 517 1.5E-28 T 21-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Pfam PF05192 MutS domain III 272 559 1.1E-40 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SUPERFAMILY SSF55271 6 116 4.58E-43 T 21-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 PANTHER PTHR11361:SF86 2 852 0.0 T 21-04-2016 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SMART SM00533 286 591 3.5E-110 T 21-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Pfam PF01624 MutS domain I 11 122 4.0E-43 T 21-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Gene3D G3DSA:3.30.420.110 129 258 5.7E-43 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Gene3D G3DSA:3.40.50.300 567 797 3.1E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Pfam PF00488 MutS domain V 610 797 6.5E-88 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SMART SM00534 607 794 2.0E-122 T 21-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Gene3D G3DSA:1.10.1420.10 319 477 7.7E-56 T 21-04-2016 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SUPERFAMILY SSF52540 567 798 2.53E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 SUPERFAMILY SSF53150 117 269 1.57E-42 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Pfam PF05188 MutS domain II 131 256 5.3E-33 T 21-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SDY_2933 180fba1365f1a8f0e09e2bcb03df58e6 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.449 T 21-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 PANTHER PTHR21091:SF18 8 234 3.6E-96 T 21-04-2016 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 4.4E-117 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 PIRSF PIRSF005917 1 286 1.4E-108 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.2E-29 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 SUPERFAMILY SSF53790 12 232 1.19E-84 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 PANTHER PTHR21091 8 234 3.6E-96 T 21-04-2016 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.785 T 21-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 Gene3D G3DSA:3.40.1010.10 12 120 8.1E-17 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 Gene3D G3DSA:3.30.950.10 121 236 4.6E-43 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SDY_3325 455e664b1c8fe97fa200485a1d5a212b 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 21-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.5E-60 T 21-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 21-04-2016 IPR019972 Ribosomal protein L14P, conserved site SDY_3486 88dcf3c63abf6783733af222cd11271c 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.078 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 SMART SM01374 1 123 3.7E-86 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 SUPERFAMILY SSF50193 2 122 2.35E-51 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 8.5E-55 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 PANTHER PTHR11761 1 123 5.1E-78 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_3486 88dcf3c63abf6783733af222cd11271c 123 Gene3D G3DSA:2.40.150.20 1 123 5.2E-56 T 21-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-33 T 21-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 Gene3D G3DSA:3.40.220.10 1 161 1.5E-66 T 21-04-2016 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 5.0E-120 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 Gene3D G3DSA:3.40.630.10 171 496 1.5E-139 T 21-04-2016 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PANTHER PTHR11963:SF13 7 503 3.6E-272 T 21-04-2016 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 SUPERFAMILY SSF52949 1 184 5.89E-52 T 21-04-2016 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.564 T 21-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 PANTHER PTHR11963 7 503 3.6E-272 T 21-04-2016 SDY_4284 1c1dbe8d1eb8416428236be9661becaf 503 SUPERFAMILY SSF53187 180 496 5.34E-126 T 21-04-2016 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 158 1.5E-24 T 21-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 Gene3D G3DSA:2.60.40.1070 160 241 6.5E-26 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_0917 33204065eb06117476b43d23ad8afa1a 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 116 133 - T 21-04-2016 IPR018046 Pili assembly chaperone, conserved site SDY_0917 33204065eb06117476b43d23ad8afa1a 245 SUPERFAMILY SSF49354 34 158 2.46E-25 T 21-04-2016 IPR008962 PapD-like SDY_0917 33204065eb06117476b43d23ad8afa1a 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 181 237 7.6E-13 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_0917 33204065eb06117476b43d23ad8afa1a 245 Gene3D G3DSA:2.60.40.360 36 158 6.5E-29 T 21-04-2016 IPR008962 PapD-like SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PANTHER PTHR30251 7 236 6.1E-149 T 21-04-2016 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PANTHER PTHR30251:SF1 7 236 6.1E-149 T 21-04-2016 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PRINTS PR00969 Pili chaperone signature 88 109 1.1E-23 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PRINTS PR00969 Pili chaperone signature 175 190 1.1E-23 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PRINTS PR00969 Pili chaperone signature 37 46 1.1E-23 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PRINTS PR00969 Pili chaperone signature 140 155 1.1E-23 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 PRINTS PR00969 Pili chaperone signature 117 134 1.1E-23 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0917 33204065eb06117476b43d23ad8afa1a 245 SUPERFAMILY SSF49584 152 237 2.75E-22 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 1.6E-154 T 21-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 PANTHER PTHR22981 1 296 2.0E-246 T 21-04-2016 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 Gene3D G3DSA:1.10.1040.10 166 294 6.5E-42 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 PANTHER PTHR22981:SF78 1 296 2.0E-246 T 21-04-2016 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 SUPERFAMILY SSF48179 164 293 6.8E-36 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 2.2E-50 T 21-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 PIRSF PIRSF000103 1 295 7.3E-95 T 21-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 21-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 2.4E-36 T 21-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.173 T 21-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 Gene3D G3DSA:3.40.50.720 1 164 1.2E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3319 00d0d8be1b9c33f0c87cb560d8f93512 296 SUPERFAMILY SSF51735 2 164 7.75E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4634 75317e6add306fb74e1b6394237d64db 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.615 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SDY_4634 75317e6add306fb74e1b6394237d64db 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_4634 75317e6add306fb74e1b6394237d64db 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.5E-11 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.9E-47 T 21-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SDY_4634 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:2.40.30.10 293 394 9.5E-24 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF54980 393 468 2.52E-17 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_4634 75317e6add306fb74e1b6394237d64db 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.1E-46 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF50447 262 393 2.03E-27 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_4634 75317e6add306fb74e1b6394237d64db 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 21-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SDY_4634 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:3.40.50.300 9 283 1.2E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4634 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:3.30.70.870 395 463 7.6E-14 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PANTHER PTHR23115 1 184 2.0E-253 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PANTHER PTHR23115 251 472 2.0E-253 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PANTHER PTHR23115:SF69 1 184 2.0E-253 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 PANTHER PTHR23115:SF69 251 472 2.0E-253 T 21-04-2016 SDY_4634 75317e6add306fb74e1b6394237d64db 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.5E-18 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_4634 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF52540 10 277 8.73E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 SUPERFAMILY SSF53383 4 362 1.68E-116 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 21-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 Pfam PF00266 Aminotransferase class-V 4 350 1.6E-75 T 21-04-2016 IPR000192 Aminotransferase class V domain SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 PIRSF PIRSF000525 1 362 1.9E-149 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 PANTHER PTHR21152 3 362 2.4E-189 T 21-04-2016 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 Gene3D G3DSA:3.90.1150.10 260 361 5.4E-43 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 Gene3D G3DSA:3.40.640.10 17 258 8.6E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 51.551 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 PANTHER PTHR21152:SF1 3 362 2.4E-189 T 21-04-2016 SDY_2354 54cfc07c1632a05f60a79611a294ab3b 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 3.3E-154 T 21-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 Pfam PF00005 ABC transporter 17 165 8.0E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 SMART SM00382 26 213 1.7E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 Gene3D G3DSA:3.40.50.300 1 237 4.1E-85 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 PIRSF PIRSF039085 1 240 2.6E-109 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 SUPERFAMILY SSF52540 1 235 1.36E-80 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 PANTHER PTHR24220:SF569 3 239 4.4E-177 T 21-04-2016 SDY_0787 51bb68ec9cac907a93b1d87e961344f2 240 PANTHER PTHR24220 3 239 4.4E-177 T 21-04-2016 SDY_4302 9f56f3a32d55e5b667b4f0ec425139b1 91 Pfam PF03811 InsA N-terminal domain 2 36 4.6E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4302 9f56f3a32d55e5b667b4f0ec425139b1 91 Pfam PF12759 InsA C-terminal domain 43 88 4.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4302 9f56f3a32d55e5b667b4f0ec425139b1 91 PANTHER PTHR33293 2 88 2.4E-29 T 21-04-2016 SDY_2103 9f56f3a32d55e5b667b4f0ec425139b1 91 Pfam PF03811 InsA N-terminal domain 2 36 4.6E-19 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2103 9f56f3a32d55e5b667b4f0ec425139b1 91 Pfam PF12759 InsA C-terminal domain 43 88 4.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2103 9f56f3a32d55e5b667b4f0ec425139b1 91 PANTHER PTHR33293 2 88 2.4E-29 T 21-04-2016 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 Pfam PF07690 Major Facilitator Superfamily 1 227 6.5E-20 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 Gene3D G3DSA:1.20.1250.20 2 82 1.3E-6 T 21-04-2016 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 Gene3D G3DSA:1.20.1250.20 99 229 3.3E-11 T 21-04-2016 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 PANTHER PTHR23508:SF1 1 233 4.8E-71 T 21-04-2016 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 PANTHER PTHR23508 1 233 4.8E-71 T 21-04-2016 SDY_3867 f681eb144224956855d62b2bdca8fae7 234 SUPERFAMILY SSF103473 2 232 7.19E-30 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4101 12492f054f3e13044909a31b478c8ce9 363 SUPERFAMILY SSF55874 192 354 2.36E-27 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4101 12492f054f3e13044909a31b478c8ce9 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 356 3.4E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4101 12492f054f3e13044909a31b478c8ce9 363 Gene3D G3DSA:1.10.287.130 134 198 4.7E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 SMART SM00387 249 357 2.9E-23 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4101 12492f054f3e13044909a31b478c8ce9 363 Gene3D G3DSA:3.30.565.10 220 356 2.2E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 6.8E-8 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 6.8E-8 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PANTHER PTHR24423:SF538 1 54 1.8E-193 T 21-04-2016 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PANTHER PTHR24423:SF538 83 363 1.8E-193 T 21-04-2016 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 SUPERFAMILY SSF47384 126 199 2.55E-11 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 SMART SM00388 142 202 3.0E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 5.4E-9 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PANTHER PTHR24423 1 54 1.8E-193 T 21-04-2016 SDY_4101 12492f054f3e13044909a31b478c8ce9 363 PANTHER PTHR24423 83 363 1.8E-193 T 21-04-2016 SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 SUPERFAMILY SSF47781 19 87 4.4E-8 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 Hamap MF_00018 UPF0758 protein YicR [yicR]. 4 224 53.467 T 21-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.8E-97 T 21-04-2016 IPR001405 RadC protein SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 Pfam PF04002 RadC-like JAB domain 105 222 1.1E-43 T 21-04-2016 IPR025657 RadC-like JAB domain SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 PANTHER PTHR30471 1 224 7.2E-144 T 21-04-2016 SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 Gene3D G3DSA:3.40.140.10 101 224 2.6E-49 T 21-04-2016 SDY_4068 3c6ff0c519d9967ed9dc128ede61c9da 224 PANTHER PTHR30471:SF5 1 224 7.2E-144 T 21-04-2016 SDY_0484 9479fbdb18f14cd28bd15f97f155829d 259 Pfam PF00691 OmpA family 118 210 5.1E-15 T 21-04-2016 IPR006665 OmpA-like domain SDY_0484 9479fbdb18f14cd28bd15f97f155829d 259 SUPERFAMILY SSF103088 104 220 2.22E-18 T 21-04-2016 IPR006665 OmpA-like domain SDY_0484 9479fbdb18f14cd28bd15f97f155829d 259 Gene3D G3DSA:3.30.1330.60 114 220 5.4E-17 T 21-04-2016 IPR006665 OmpA-like domain SDY_0484 9479fbdb18f14cd28bd15f97f155829d 259 PANTHER PTHR30329:SF6 1 244 4.7E-132 T 21-04-2016 SDY_0484 9479fbdb18f14cd28bd15f97f155829d 259 PANTHER PTHR30329 1 244 4.7E-132 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 PANTHER PTHR23515:SF1 397 463 0.0 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 PANTHER PTHR23515:SF1 5 377 0.0 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 Gene3D G3DSA:1.20.1250.20 31 232 1.3E-13 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 SUPERFAMILY SSF103473 20 460 9.42E-36 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 PANTHER PTHR23515 397 463 0.0 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 PANTHER PTHR23515 5 377 0.0 T 21-04-2016 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 Pfam PF07690 Major Facilitator Superfamily 45 422 3.8E-15 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 3.7E-118 T 21-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 SDY_1278 2dce49cb6b34a6a0fe0f6b7237e94e7a 463 Gene3D G3DSA:1.20.1250.20 252 457 1.7E-10 T 21-04-2016 SDY_2357 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 7.9E-129 T 21-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 SDY_2357 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520:SF4 12 228 1.4E-103 T 21-04-2016 SDY_2357 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520:SF4 245 280 1.4E-103 T 21-04-2016 SDY_2357 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.6E-98 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_2357 61b646950d110aff8f6777315807ff2b 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.7E-76 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_2357 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site SDY_2357 61b646950d110aff8f6777315807ff2b 285 Gene3D G3DSA:1.20.1080.10 29 280 8.6E-91 T 21-04-2016 IPR023271 Aquaporin-like SDY_2357 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site SDY_2357 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520 12 228 1.4E-103 T 21-04-2016 SDY_2357 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520 245 280 1.4E-103 T 21-04-2016 SDY_3338 6a88e982203a4486d43e670786e9b081 298 Pfam PF01136 Peptidase family U32 98 204 4.0E-11 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3338 6a88e982203a4486d43e670786e9b081 298 PANTHER PTHR30217 7 298 2.5E-221 T 21-04-2016 SDY_3338 6a88e982203a4486d43e670786e9b081 298 PANTHER PTHR30217:SF8 7 298 2.5E-221 T 21-04-2016 SDY_2027 d03ae69f1e89d70b2fd46f660af23b6f 275 SUPERFAMILY SSF161098 7 260 9.35E-53 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2027 d03ae69f1e89d70b2fd46f660af23b6f 275 PANTHER PTHR30193 1 275 3.2E-126 T 21-04-2016 SDY_2027 d03ae69f1e89d70b2fd46f660af23b6f 275 Gene3D G3DSA:1.10.3720.10 3 271 4.6E-45 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2027 d03ae69f1e89d70b2fd46f660af23b6f 275 PANTHER PTHR30193:SF10 1 275 3.2E-126 T 21-04-2016 SDY_2027 d03ae69f1e89d70b2fd46f660af23b6f 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 1.3E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0212 0c4f8e13cf095b1bb1b560ef9af55a1b 274 SUPERFAMILY SSF54001 64 160 1.93E-29 T 21-04-2016 SDY_0212 0c4f8e13cf095b1bb1b560ef9af55a1b 274 SUPERFAMILY SSF54001 201 264 1.93E-29 T 21-04-2016 SDY_0212 0c4f8e13cf095b1bb1b560ef9af55a1b 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 156 2.1E-9 T 21-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SDY_0212 0c4f8e13cf095b1bb1b560ef9af55a1b 274 Gene3D G3DSA:2.30.30.330 62 236 2.5E-25 T 21-04-2016 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 SUPERFAMILY SSF47413 4 71 1.39E-18 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 SMART SM00530 11 66 1.2E-15 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 PANTHER PTHR10245:SF9 1 178 8.6E-73 T 21-04-2016 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 Gene3D G3DSA:1.10.260.40 2 79 1.6E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 PANTHER PTHR10245 1 178 8.6E-73 T 21-04-2016 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 Gene3D G3DSA:2.60.120.10 85 177 2.3E-34 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 Pfam PF07883 Cupin domain 104 171 8.1E-10 T 21-04-2016 IPR013096 Cupin 2, conserved barrel SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 Pfam PF01381 Helix-turn-helix 12 64 1.0E-16 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1742 348a488ca86d607a0c49f7ef899d9703 178 SUPERFAMILY SSF51182 51 176 4.57E-23 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 PANTHER PTHR10314:SF4 74 131 3.0E-30 T 21-04-2016 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 PANTHER PTHR10314:SF4 1 51 3.0E-30 T 21-04-2016 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 4.4E-102 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 PANTHER PTHR10314 74 131 3.0E-30 T 21-04-2016 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 PANTHER PTHR10314 1 51 3.0E-30 T 21-04-2016 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 21-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.7E-113 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 SUPERFAMILY SSF51366 1 266 2.17E-91 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 Gene3D G3DSA:3.20.20.70 1 267 1.3E-99 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1328 80286dc899c7bc08453fa55c72cfd806 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.722 T 21-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SDY_0079 073b863fe19b6e2d8e67384337c9e777 784 Gene3D G3DSA:2.60.450.10 47 209 2.9E-25 T 21-04-2016 SDY_0079 073b863fe19b6e2d8e67384337c9e777 784 Pfam PF03968 OstA-like protein 53 194 2.1E-28 T 21-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SDY_0079 073b863fe19b6e2d8e67384337c9e777 784 Pfam PF04453 Organic solvent tolerance protein 309 697 6.8E-112 T 21-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SDY_0079 073b863fe19b6e2d8e67384337c9e777 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 763 21.306 T 21-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SDY_0079 073b863fe19b6e2d8e67384337c9e777 784 PANTHER PTHR30189 1 782 8.8E-132 T 21-04-2016 SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 PANTHER PTHR12029 3 179 1.7E-49 T 21-04-2016 SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 Gene3D G3DSA:3.40.1280.10 4 172 1.7E-33 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 3.2E-97 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.2E-33 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 PIRSF PIRSF004808 1 245 7.9E-81 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_2728 da3a821e4c4e571c4c0886b5722329c6 245 SUPERFAMILY SSF75217 4 164 8.5E-40 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_1523 f907b505ad5b0bfcb8c1f240c1d18848 182 Gene3D G3DSA:1.20.1290.10 30 175 2.5E-37 T 21-04-2016 IPR029032 AhpD-like SDY_1523 f907b505ad5b0bfcb8c1f240c1d18848 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 122 1.9E-6 T 21-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SDY_1523 f907b505ad5b0bfcb8c1f240c1d18848 182 SUPERFAMILY SSF69118 3 173 3.24E-36 T 21-04-2016 IPR029032 AhpD-like SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 SUPERFAMILY SSF54862 18 116 5.44E-23 T 21-04-2016 SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 Gene3D G3DSA:3.30.70.20 3 93 9.9E-21 T 21-04-2016 SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 PANTHER PTHR10849 1 150 1.6E-76 T 21-04-2016 SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 4.3E-13 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2917 f1319ab17c4af5b70e5e403f4ba4dc6c 180 PANTHER PTHR10849:SF11 1 150 1.6E-76 T 21-04-2016 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 PANTHER PTHR14503 1 46 2.6E-25 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 21-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4185 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 21-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 PANTHER PTHR21075 1 711 0.0 T 21-04-2016 SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 Gene3D G3DSA:3.20.70.20 124 685 1.1E-189 T 21-04-2016 SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 SUPERFAMILY SSF51998 121 687 2.84E-200 T 21-04-2016 SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 Pfam PF03477 ATP cone domain 4 89 1.9E-21 T 21-04-2016 IPR005144 ATP-cone domain SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 2.5E-213 T 21-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_4257 ae5b93a1d4979bf19a0fc1eaf21e2518 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 5.7E-185 T 21-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SDY_0726 bd075ba053803cf9eabc0cc803b4c943 272 PANTHER PTHR39184:SF1 3 261 5.9E-34 T 21-04-2016 SDY_0726 bd075ba053803cf9eabc0cc803b4c943 272 Pfam PF04466 Phage terminase large subunit 32 270 2.0E-46 T 21-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 SDY_0726 bd075ba053803cf9eabc0cc803b4c943 272 PANTHER PTHR39184 3 261 5.9E-34 T 21-04-2016 SDY_0726 bd075ba053803cf9eabc0cc803b4c943 272 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 34 254 5.6E-40 T 21-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 SDY_1842 37fc4a89a6ca546b8b403b43b2617a0f 466 PANTHER PTHR30009 12 457 0.0 T 21-04-2016 SDY_1842 37fc4a89a6ca546b8b403b43b2617a0f 466 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 3.1E-99 T 21-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 SDY_1842 37fc4a89a6ca546b8b403b43b2617a0f 466 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 456 2.6E-222 T 21-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 SDY_1842 37fc4a89a6ca546b8b403b43b2617a0f 466 PANTHER PTHR30009:SF1 12 457 0.0 T 21-04-2016 SDY_1842 37fc4a89a6ca546b8b403b43b2617a0f 466 Pfam PF02378 Phosphotransferase system, EIIC 19 361 7.2E-88 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.691 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 Pfam PF03884 Domain of unknown function (DUF329) 7 56 3.6E-25 T 21-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 Gene3D G3DSA:3.30.50.10 1 62 8.2E-28 T 21-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 PANTHER PTHR36150:SF1 2 62 2.8E-28 T 21-04-2016 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 SUPERFAMILY SSF57716 2 62 2.14E-23 T 21-04-2016 SDY_0131 389a5dad656b70da31de26225cbe2bab 65 PANTHER PTHR36150 2 62 2.8E-28 T 21-04-2016 SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 Gene3D G3DSA:3.30.230.10 4 130 1.3E-51 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 SUPERFAMILY SSF54211 5 130 6.07E-50 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.5E-48 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 PANTHER PTHR21569 1 130 7.6E-77 T 21-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.147 T 21-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SDY_3406 b0a92c7bfd277c123012ac7babc694e7 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 21-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_0623 fb5cad1bdf5c957282b288c2e61ba77c 148 SUPERFAMILY SSF46785 6 134 1.76E-45 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0623 fb5cad1bdf5c957282b288c2e61ba77c 148 Pfam PF01475 Ferric uptake regulator family 10 130 6.9E-49 T 21-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SDY_0623 fb5cad1bdf5c957282b288c2e61ba77c 148 PANTHER PTHR33202 7 142 5.6E-48 T 21-04-2016 SDY_0623 fb5cad1bdf5c957282b288c2e61ba77c 148 Gene3D G3DSA:1.10.10.10 3 82 5.5E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3186 c61f86dde8030b2aaae3450e9a67661a 135 PIRSF PIRSF020653 1 135 4.9E-78 T 21-04-2016 IPR009883 Toxin CptA SDY_3186 c61f86dde8030b2aaae3450e9a67661a 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 128 7.8E-55 T 21-04-2016 IPR009883 Toxin CptA SDY_3186 c61f86dde8030b2aaae3450e9a67661a 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 131 3.0E-58 T 21-04-2016 IPR009883 Toxin CptA SDY_2551 3494f31de47f5362e8fac7399662292c 310 Pfam PF01226 Formate/nitrite transporter 40 276 2.4E-40 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_2551 3494f31de47f5362e8fac7399662292c 310 Gene3D G3DSA:1.20.1080.10 54 281 5.8E-47 T 21-04-2016 IPR023271 Aquaporin-like SDY_2551 3494f31de47f5362e8fac7399662292c 310 PANTHER PTHR30520:SF2 20 309 6.4E-220 T 21-04-2016 SDY_2551 3494f31de47f5362e8fac7399662292c 310 PANTHER PTHR30520 20 309 6.4E-220 T 21-04-2016 SDY_3600 c675483e8760bf8a370f6b5d7490010c 295 SUPERFAMILY SSF161098 56 282 2.49E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3600 c675483e8760bf8a370f6b5d7490010c 295 PANTHER PTHR32243 5 293 8.5E-114 T 21-04-2016 SDY_3600 c675483e8760bf8a370f6b5d7490010c 295 Gene3D G3DSA:1.10.3720.10 62 291 3.5E-51 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3600 c675483e8760bf8a370f6b5d7490010c 295 PANTHER PTHR32243:SF13 5 293 8.5E-114 T 21-04-2016 SDY_3600 c675483e8760bf8a370f6b5d7490010c 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 2.2E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.5E-87 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 Gene3D G3DSA:3.60.20.10 2 172 3.7E-85 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 Pfam PF00227 Proteasome subunit 2 167 1.3E-23 T 21-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 PANTHER PTHR32194 2 175 2.1E-128 T 21-04-2016 SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 SUPERFAMILY SSF56235 2 172 1.08E-58 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 PIRSF PIRSF039093 1 175 3.1E-88 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SDY_3805 ca63a4328404c8e6cbec8523b84f1d95 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.149 T 21-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 PANTHER PTHR30328 1 210 3.1E-149 T 21-04-2016 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-12 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-12 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-19 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.10.60 45 62 7.9E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.10.60 1 44 7.8E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF46689 1 68 3.64E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF48498 84 200 6.43E-14 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 PANTHER PTHR30328:SF26 1 210 3.1E-149 T 21-04-2016 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.357.10 63 203 1.8E-18 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_0455 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 8.6E-52 T 21-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 Pfam PF00814 Glycoprotease family 28 131 2.7E-27 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 SUPERFAMILY SSF53067 108 217 1.07E-30 T 21-04-2016 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 PANTHER PTHR11735:SF11 1 138 2.7E-63 T 21-04-2016 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 1.6E-68 T 21-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 SUPERFAMILY SSF53067 3 106 2.42E-30 T 21-04-2016 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 Gene3D G3DSA:3.30.420.40 1 133 2.5E-45 T 21-04-2016 SDY_1711 68f8a2cda096f3fbd751afb9ab972d74 231 PANTHER PTHR11735 1 138 2.7E-63 T 21-04-2016 SDY_4290 eb12d58334b8e6b2694d9621976b5a38 58 PANTHER PTHR30629:SF4 1 58 6.9E-24 T 21-04-2016 SDY_4290 eb12d58334b8e6b2694d9621976b5a38 58 PANTHER PTHR30629 1 58 6.9E-24 T 21-04-2016 SDY_4290 eb12d58334b8e6b2694d9621976b5a38 58 Pfam PF13356 Domain of unknown function (DUF4102) 3 57 3.8E-9 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 SDY_2950 097d6870c52017186b8739d0959c870b 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.8E-42 T 21-04-2016 SDY_2950 097d6870c52017186b8739d0959c870b 475 Gene3D G3DSA:3.40.50.300 21 236 2.2E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2950 097d6870c52017186b8739d0959c870b 475 SUPERFAMILY SSF50465 336 435 7.19E-30 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SDY_2950 097d6870c52017186b8739d0959c870b 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 1.6E-212 T 21-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SDY_2950 097d6870c52017186b8739d0959c870b 475 PANTHER PTHR23115 74 356 9.4E-70 T 21-04-2016 SDY_2950 097d6870c52017186b8739d0959c870b 475 PANTHER PTHR23115 15 54 9.4E-70 T 21-04-2016 SDY_2950 097d6870c52017186b8739d0959c870b 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_2950 097d6870c52017186b8739d0959c870b 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 4.0E-13 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_2950 097d6870c52017186b8739d0959c870b 475 Gene3D G3DSA:2.40.30.10 244 359 4.9E-17 T 21-04-2016 SDY_2950 097d6870c52017186b8739d0959c870b 475 SUPERFAMILY SSF52540 24 251 3.2E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2950 097d6870c52017186b8739d0959c870b 475 SUPERFAMILY SSF50447 244 328 2.43E-22 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_2950 097d6870c52017186b8739d0959c870b 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.819 T 21-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SDY_2950 097d6870c52017186b8739d0959c870b 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 6.2E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2950 097d6870c52017186b8739d0959c870b 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 6.2E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2950 097d6870c52017186b8739d0959c870b 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 6.2E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2950 097d6870c52017186b8739d0959c870b 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 6.2E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_2950 097d6870c52017186b8739d0959c870b 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 6.2E-13 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 Gene3D G3DSA:1.20.1250.20 13 195 2.2E-34 T 21-04-2016 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 Gene3D G3DSA:1.20.1250.20 214 394 2.7E-19 T 21-04-2016 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 PANTHER PTHR23510 1 402 3.8E-276 T 21-04-2016 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 Pfam PF07690 Major Facilitator Superfamily 22 352 1.5E-38 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 PANTHER PTHR23510:SF6 1 402 3.8E-276 T 21-04-2016 SDY_0303 6cfec02dca48d5ab1af5ff77bc8dbefa 456 SUPERFAMILY SSF103473 8 393 6.8E-62 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2500 9c56481195c0a84887bc132b90327655 120 SMART SM00905 8 118 2.0E-33 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_2500 9c56481195c0a84887bc132b90327655 120 Gene3D G3DSA:3.30.1130.10 3 120 3.3E-37 T 21-04-2016 SDY_2500 9c56481195c0a84887bc132b90327655 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 2.1E-25 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_2500 9c56481195c0a84887bc132b90327655 120 PANTHER PTHR20941:SF6 1 120 3.0E-78 T 21-04-2016 SDY_2500 9c56481195c0a84887bc132b90327655 120 PANTHER PTHR20941 1 120 3.0E-78 T 21-04-2016 SDY_2500 9c56481195c0a84887bc132b90327655 120 SUPERFAMILY SSF55620 6 120 1.67E-31 T 21-04-2016 SDY_2500 9c56481195c0a84887bc132b90327655 120 TIGRFAM TIGR00526 folB_dom: FolB domain 6 120 1.5E-39 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 Pfam PF00270 DEAD/DEAH box helicase 25 196 3.1E-51 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 SMART SM00487 20 223 9.1E-64 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 SMART SM00490 259 340 7.6E-32 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 PANTHER PTHR24031:SF0 1 448 1.7E-196 T 21-04-2016 SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 52.416 T 21-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 Pfam PF00271 Helicase conserved C-terminal domain 237 339 6.7E-26 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 PANTHER PTHR24031 1 448 1.7E-196 T 21-04-2016 SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 Gene3D G3DSA:3.40.50.300 1 213 2.3E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 SUPERFAMILY SSF52540 75 361 4.7E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SDY_0806 0d89ac79710379fcbff6d74c64deb18f 454 Gene3D G3DSA:3.40.50.300 214 372 1.9E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0210 f8c23b20b324e9b941fd20cd1ba936ed 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_0210 f8c23b20b324e9b941fd20cd1ba936ed 140 PANTHER PTHR11075 10 139 1.2E-39 T 21-04-2016 SDY_0210 f8c23b20b324e9b941fd20cd1ba936ed 140 Gene3D G3DSA:3.30.160.200 3 107 9.3E-33 T 21-04-2016 SDY_0210 f8c23b20b324e9b941fd20cd1ba936ed 140 SUPERFAMILY SSF75620 7 108 3.53E-14 T 21-04-2016 SDY_0210 f8c23b20b324e9b941fd20cd1ba936ed 140 Pfam PF00472 RF-1 domain 6 132 6.1E-27 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_3140 275645e771c830c876b433f8f88b1ba0 252 PANTHER PTHR22726 1 249 1.2E-156 T 21-04-2016 SDY_3140 275645e771c830c876b433f8f88b1ba0 252 Gene3D G3DSA:3.30.2010.10 65 145 2.4E-23 T 21-04-2016 SDY_3140 275645e771c830c876b433f8f88b1ba0 252 PANTHER PTHR22726:SF4 1 249 1.2E-156 T 21-04-2016 SDY_3140 275645e771c830c876b433f8f88b1ba0 252 Pfam PF01435 Peptidase family M48 71 245 4.8E-26 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 SUPERFAMILY SSF51905 290 414 2.26E-40 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 SUPERFAMILY SSF51905 11 185 2.26E-40 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 PANTHER PTHR10617 11 416 4.3E-140 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 7.4E-7 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 7.4E-7 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 Gene3D G3DSA:3.30.9.10 243 346 6.8E-6 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 PANTHER PTHR10617:SF98 11 416 4.3E-140 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 SUPERFAMILY SSF54373 185 287 8.63E-17 T 21-04-2016 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 Pfam PF12831 FAD dependent oxidoreductase 16 160 1.0E-8 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2968 7fbf8286bee0f1eb1dc4f7c340ecc9ff 433 Gene3D G3DSA:3.50.50.60 14 242 3.3E-40 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 233 255 - T 21-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 SUPERFAMILY SSF47170 1 107 1.7E-21 T 21-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 SMART SM00283 208 455 2.3E-89 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 SMART SM00304 155 207 1.0E-9 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 Pfam PF02203 Tar ligand binding domain homologue 1 108 2.8E-21 T 21-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PANTHER PTHR32089 1 458 0.0 T 21-04-2016 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 267 454 9.6E-66 T 21-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 SUPERFAMILY SSF58104 175 456 9.68E-71 T 21-04-2016 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 229 258 1.5E-58 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 335 364 1.5E-58 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.5E-58 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 333 1.5E-58 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 1.5E-58 T 21-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 Gene3D G3DSA:1.10.287.950 223 427 2.6E-59 T 21-04-2016 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 Pfam PF00672 HAMP domain 136 202 2.0E-14 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 SMART SM00319 1 117 2.6E-31 T 21-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 SDY_1760 b6acb8d528b70c5ded7cd7fe6bb31a40 477 PANTHER PTHR32089:SF35 1 458 0.0 T 21-04-2016 SDY_2794 0e7203840af1f66727a214e0f112a6fe 70 SUPERFAMILY SSF103515 3 70 4.18E-7 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_2794 0e7203840af1f66727a214e0f112a6fe 70 Gene3D G3DSA:2.40.128.130 2 70 6.7E-12 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_2794 0e7203840af1f66727a214e0f112a6fe 70 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1 70 3.6E-12 T 21-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SDY_2794 0e7203840af1f66727a214e0f112a6fe 70 PANTHER PTHR12338:SF7 2 70 4.6E-29 T 21-04-2016 SDY_2794 0e7203840af1f66727a214e0f112a6fe 70 PANTHER PTHR12338 2 70 4.6E-29 T 21-04-2016 SDY_0769 8ffad3cdcdbb25f1d4f9cdb008f0c4e6 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0769 8ffad3cdcdbb25f1d4f9cdb008f0c4e6 237 Gene3D G3DSA:3.30.420.10 66 226 7.9E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0769 8ffad3cdcdbb25f1d4f9cdb008f0c4e6 237 PANTHER PTHR32552 2 235 2.1E-61 T 21-04-2016 SDY_0769 8ffad3cdcdbb25f1d4f9cdb008f0c4e6 237 Pfam PF00665 Integrase core domain 72 186 8.9E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0769 8ffad3cdcdbb25f1d4f9cdb008f0c4e6 237 SUPERFAMILY SSF53098 65 229 1.52E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 PANTHER PTHR20836 6 273 5.3E-104 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 SUPERFAMILY SSF51735 4 130 9.77E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 SUPERFAMILY SSF51735 240 272 9.77E-52 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 2.1E-112 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 PANTHER PTHR20836:SF0 6 273 5.3E-104 T 21-04-2016 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 Gene3D G3DSA:3.40.50.720 5 167 2.3E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 SUPERFAMILY SSF55347 131 240 1.44E-37 T 21-04-2016 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 21-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 6.8E-43 T 21-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 PIRSF PIRSF000161 4 272 1.0E-91 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.085 T 21-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_0053 6b859705bbb10510fb63eb7595c54d2b 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.2E-40 T 21-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 Gene3D G3DSA:3.30.870.10 27 154 5.9E-16 T 21-04-2016 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 Gene3D G3DSA:3.30.870.10 255 396 7.8E-16 T 21-04-2016 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 SMART SM00155 353 380 8.1E-5 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 SMART SM00155 134 160 0.012 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 PANTHER PTHR12586:SF3 1 451 1.4E-287 T 21-04-2016 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 SUPERFAMILY SSF56024 10 210 1.16E-27 T 21-04-2016 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 SUPERFAMILY SSF56024 253 396 4.19E-19 T 21-04-2016 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 PIRSF PIRSF000850 1 452 1.3E-268 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 PANTHER PTHR12586 1 451 1.4E-287 T 21-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 Pfam PF13091 PLD-like domain 41 154 2.1E-6 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_2828 99b8361b8492abc30c4d58b9092e1b08 452 Pfam PF13091 PLD-like domain 258 405 5.3E-23 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 5.4E-35 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Gene3D G3DSA:3.30.465.10 73 229 1.1E-52 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 SUPERFAMILY SSF56176 3 196 2.94E-50 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Gene3D G3DSA:3.90.78.10 230 341 1.3E-47 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 PANTHER PTHR21071 1 337 7.4E-200 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Gene3D G3DSA:3.30.43.10 3 68 7.1E-28 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 1.5E-132 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 91.661 T 21-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 SUPERFAMILY SSF56194 202 339 4.71E-52 T 21-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 Pfam PF01565 FAD binding domain 18 149 7.7E-27 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SDY_3756 b14f6d28f79c52d6f3a507c3e048f7be 342 PANTHER PTHR21071:SF6 1 337 7.4E-200 T 21-04-2016 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 PANTHER PTHR34772 1 94 5.9E-45 T 21-04-2016 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 21-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 Gene3D G3DSA:2.30.30.100 1 74 4.5E-38 T 21-04-2016 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 PANTHER PTHR34772:SF1 1 94 5.9E-45 T 21-04-2016 SDY_4417 059fe7b5ef031358650d6d6717365cb2 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 21-04-2016 IPR010920 LSM domain SDY_2265 de002603273113bf778f178cdd557a64 86 Gene3D G3DSA:3.40.50.270 2 83 1.3E-27 T 21-04-2016 SDY_2265 de002603273113bf778f178cdd557a64 86 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 80 9.2E-11 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2265 de002603273113bf778f178cdd557a64 86 PANTHER PTHR33843:SF6 1 83 6.5E-62 T 21-04-2016 SDY_2265 de002603273113bf778f178cdd557a64 86 SUPERFAMILY SSF52794 3 84 1.01E-15 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2265 de002603273113bf778f178cdd557a64 86 PANTHER PTHR33843 1 83 6.5E-62 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 SUPERFAMILY SSF56935 68 747 2.36E-143 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 PANTHER PTHR32552 68 747 5.6E-304 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 PANTHER PTHR32552 13 44 5.6E-304 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 PANTHER PTHR32552:SF17 68 747 5.6E-304 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 PANTHER PTHR32552:SF17 13 44 5.6E-304 T 21-04-2016 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 747 8.9E-206 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 Gene3D G3DSA:2.40.170.20 196 747 1.2E-174 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 Pfam PF00593 TonB dependent receptor 510 745 8.6E-28 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 Gene3D G3DSA:2.170.130.10 32 192 4.5E-39 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_0166 fa7561ce8b1db4d75a2a099fdc22215b 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 180 4.1E-20 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 22 343 52.917 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 SUPERFAMILY SSF51395 27 335 4.76E-71 T 21-04-2016 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 PIRSF PIRSF006621 16 341 1.5E-71 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 Gene3D G3DSA:3.20.20.70 24 267 6.8E-75 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 21-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 PANTHER PTHR11082:SF29 4 343 1.3E-170 T 21-04-2016 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 26 342 7.0E-175 T 21-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 PANTHER PTHR11082 4 343 1.3E-170 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_4525 ac1ecb17c2a09f3d70497465a754a0ed 345 Pfam PF01207 Dihydrouridine synthase (Dus) 30 339 5.8E-100 T 21-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SDY_2312 88800eb0f646df227539735a47b8dfeb 188 SUPERFAMILY SSF81342 5 181 3.22E-41 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_2312 88800eb0f646df227539735a47b8dfeb 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 4.0E-29 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_2312 88800eb0f646df227539735a47b8dfeb 188 PANTHER PTHR30529 2 184 1.1E-95 T 21-04-2016 SDY_2312 88800eb0f646df227539735a47b8dfeb 188 Gene3D G3DSA:1.20.950.20 89 174 1.3E-4 T 21-04-2016 SDY_2312 88800eb0f646df227539735a47b8dfeb 188 PANTHER PTHR30529:SF5 2 184 1.1E-95 T 21-04-2016 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 5.9E-77 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 1.4E-113 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.632 T 21-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 PANTHER PTHR30589 2 289 2.3E-134 T 21-04-2016 SDY_3045 9e23702219d06826b81dbc87632ba4fd 291 PANTHER PTHR30589:SF0 2 289 2.3E-134 T 21-04-2016 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.6E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.6E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.6E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.6E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.6E-34 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 Gene3D G3DSA:3.30.930.10 105 427 6.6E-142 T 21-04-2016 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PIRSF PIRSF001529 1 430 2.3E-185 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.647 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 Gene3D G3DSA:1.10.287.40 1 104 2.4E-29 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 8.7E-36 T 21-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 SUPERFAMILY SSF46589 1 112 1.41E-32 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.9E-34 T 21-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PANTHER PTHR11778:SF0 1 429 2.0E-225 T 21-04-2016 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 1.3E-184 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 PANTHER PTHR11778 1 429 2.0E-225 T 21-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SDY_2368 d48e314fc2a8cd3f36bf88aa5a5fd82b 430 SUPERFAMILY SSF55681 116 424 3.32E-99 T 21-04-2016 SDY_1827 95b9df49d2d067b16631db581e754b89 467 Pfam PF00206 Lyase 12 342 4.2E-125 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal SDY_1827 95b9df49d2d067b16631db581e754b89 467 Gene3D G3DSA:1.20.200.10 139 416 3.8E-106 T 21-04-2016 SDY_1827 95b9df49d2d067b16631db581e754b89 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.7E-34 T 21-04-2016 IPR000362 Fumarate lyase family SDY_1827 95b9df49d2d067b16631db581e754b89 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.7E-34 T 21-04-2016 IPR000362 Fumarate lyase family SDY_1827 95b9df49d2d067b16631db581e754b89 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.7E-34 T 21-04-2016 IPR000362 Fumarate lyase family SDY_1827 95b9df49d2d067b16631db581e754b89 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.7E-34 T 21-04-2016 IPR000362 Fumarate lyase family SDY_1827 95b9df49d2d067b16631db581e754b89 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.984 T 21-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_1827 95b9df49d2d067b16631db581e754b89 467 PANTHER PTHR11444 1 466 2.0E-256 T 21-04-2016 IPR000362 Fumarate lyase family SDY_1827 95b9df49d2d067b16631db581e754b89 467 Gene3D G3DSA:1.10.40.30 417 462 1.2E-33 T 21-04-2016 SDY_1827 95b9df49d2d067b16631db581e754b89 467 Pfam PF10415 Fumarase C C-terminus 408 461 1.3E-26 T 21-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_1827 95b9df49d2d067b16631db581e754b89 467 Gene3D G3DSA:1.10.275.10 3 138 3.2E-61 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal SDY_1827 95b9df49d2d067b16631db581e754b89 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 1.7E-254 T 21-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_1827 95b9df49d2d067b16631db581e754b89 467 PANTHER PTHR11444:SF1 1 466 2.0E-256 T 21-04-2016 SDY_1827 95b9df49d2d067b16631db581e754b89 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_1827 95b9df49d2d067b16631db581e754b89 467 SUPERFAMILY SSF48557 5 459 2.36E-160 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 SDY_3154 f71441048a4f2947e6282ef7ec53d918 143 Pfam PF03479 Domain of unknown function (DUF296) 14 120 1.2E-22 T 21-04-2016 IPR005175 PPC domain SDY_3154 f71441048a4f2947e6282ef7ec53d918 143 Gene3D G3DSA:3.30.1330.80 13 141 5.2E-47 T 21-04-2016 SDY_3154 f71441048a4f2947e6282ef7ec53d918 143 SUPERFAMILY SSF117856 10 140 2.88E-34 T 21-04-2016 SDY_3154 f71441048a4f2947e6282ef7ec53d918 143 PANTHER PTHR34988 1 141 4.0E-39 T 21-04-2016 SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 PANTHER PTHR23407 2 182 1.1E-67 T 21-04-2016 SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 PANTHER PTHR23407:SF1 2 182 1.1E-67 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 176 6.9E-51 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 Gene3D G3DSA:3.40.50.10420 2 181 5.8E-58 T 21-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 PIRSF PIRSF006806 1 179 4.6E-34 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 176 1.2E-42 T 21-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SDY_3170 fcdedcef21d473dd07f54baf7c09676e 182 SUPERFAMILY SSF100950 2 182 3.49E-53 T 21-04-2016 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 Gene3D G3DSA:3.90.1010.10 2 126 1.0E-57 T 21-04-2016 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 5.3E-72 T 21-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 PANTHER PTHR10093 1 128 2.1E-105 T 21-04-2016 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.0E-57 T 21-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 SUPERFAMILY SSF82649 1 125 1.2E-49 T 21-04-2016 SDY_2725 ecad0a2b61665c6066ff039f2211b326 128 PANTHER PTHR10093:SF3 1 128 2.1E-105 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 Gene3D G3DSA:2.40.50.100 61 91 1.4E-11 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 Gene3D G3DSA:2.40.50.100 238 272 1.4E-11 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 SUPERFAMILY SSF51230 57 98 3.85E-5 T 21-04-2016 IPR011053 Single hybrid motif SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 Pfam PF13437 HlyD family secretion protein 242 343 3.6E-17 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PANTHER PTHR30386 25 391 1.2E-119 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PANTHER PTHR30386:SF4 25 391 1.2E-119 T 21-04-2016 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 253 274 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 333 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 286 310 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 27 50 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 371 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 391 1.4E-38 T 21-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SDY_0416 7b33e8dbd7b764c2de8f5ff191d89a5b 391 ProSitePatterns PS00543 HlyD family secretion proteins signature. 356 378 - T 21-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.0E-32 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00679 Elongation factor G C-terminus 611 696 6.7E-29 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.1E-16 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 310 702 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 3 184 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 261 289 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.240 610 696 3.0E-32 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF50447 271 411 3.76E-35 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.230.10 491 609 9.4E-47 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SMART SM00889 487 609 1.4E-72 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 611 700 2.84E-27 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.8E-68 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF52540 6 288 1.2E-106 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.870 413 487 7.9E-39 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 310 702 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 3 184 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 261 289 0.0 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SMART SM00838 611 698 3.9E-50 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.9E-45 T 21-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:2.40.30.10 312 412 6.1E-38 T 21-04-2016 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.335 T 21-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.8E-34 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_3501 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.40.50.300 7 293 5.1E-104 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3501 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54211 486 610 9.1E-41 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 PANTHER PTHR30389:SF6 2 548 0.0 T 21-04-2016 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 Gene3D G3DSA:3.20.130.10 348 537 2.4E-75 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 PANTHER PTHR30389 2 548 0.0 T 21-04-2016 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 SUPERFAMILY SSF117457 361 536 1.44E-61 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 1.2E-33 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 9.3E-66 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.4E-88 T 21-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 Pfam PF05683 Fumarase C-terminus 332 537 7.9E-93 T 21-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 PIRSF PIRSF001394 30 548 5.2E-236 T 21-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_4231 333c0d9b8640304664b88e3c3fa4d21c 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 Gene3D G3DSA:3.40.50.970 1 80 5.7E-40 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 SUPERFAMILY SSF52518 1 76 1.17E-31 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 PANTHER PTHR11624:SF67 162 210 2.4E-109 T 21-04-2016 SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 PANTHER PTHR11624:SF67 1 143 2.4E-109 T 21-04-2016 SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 Gene3D G3DSA:3.40.50.920 82 210 2.5E-55 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 PANTHER PTHR11624 1 143 2.4E-109 T 21-04-2016 IPR033247 Transketolase family SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 PANTHER PTHR11624 162 210 2.4E-109 T 21-04-2016 IPR033247 Transketolase family SDY_P182 101b992b70e473fd46d4c7c17756fb7c 210 SUPERFAMILY SSF52922 77 210 2.36E-47 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 SMART SM00065 61 207 5.5E-17 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 Gene3D G3DSA:3.30.450.40 48 212 1.9E-16 T 21-04-2016 IPR029016 GAF domain-like SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 SUPERFAMILY SSF55073 222 374 1.57E-38 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 PANTHER PTHR10799:SF710 250 369 6.3E-18 T 21-04-2016 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 PANTHER PTHR10799:SF710 49 202 6.3E-18 T 21-04-2016 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 PANTHER PTHR10799 250 369 6.3E-18 T 21-04-2016 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 SMART SM00267 206 378 1.2E-53 T 21-04-2016 IPR000160 GGDEF domain SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 PANTHER PTHR10799 49 202 6.3E-18 T 21-04-2016 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 373 2.6E-41 T 21-04-2016 IPR000160 GGDEF domain SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 SUPERFAMILY SSF55781 61 210 7.63E-17 T 21-04-2016 IPR029016 GAF domain-like SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 Gene3D G3DSA:3.30.70.270 218 380 4.1E-44 T 21-04-2016 SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 377 5.1E-37 T 21-04-2016 IPR000160 GGDEF domain SDY_1692 bc63e8848873a9e8069dc38d0b6edb15 384 Pfam PF13185 GAF domain 60 198 1.3E-8 T 21-04-2016 IPR003018 GAF domain GO:0005515 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 Gene3D G3DSA:1.20.1050.10 90 215 4.6E-49 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 PANTHER PTHR11260:SF237 1 215 1.8E-126 T 21-04-2016 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 SUPERFAMILY SSF52833 1 78 6.99E-20 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 21-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 8.8E-103 T 21-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 PANTHER PTHR11260 1 215 1.8E-126 T 21-04-2016 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 SUPERFAMILY SSF47616 76 215 5.78E-48 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 7.3E-48 T 21-04-2016 IPR007494 Glutaredoxin 2, C-terminal SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 5.8E-13 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_2089 cb8f7aab39c0406b3ff59e13cfe82085 215 Gene3D G3DSA:3.40.30.10 8 83 1.8E-31 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1953 e9fd0f96555dba7596f22e4cd45b4e11 353 SUPERFAMILY SSF51004 37 337 1.44E-40 T 21-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SDY_1953 e9fd0f96555dba7596f22e4cd45b4e11 353 Gene3D G3DSA:2.130.10.10 46 333 6.1E-36 T 21-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 SUPERFAMILY SSF58014 42 138 1.57E-26 T 21-04-2016 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Pfam PF01025 GrpE 35 194 7.3E-47 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.664 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PANTHER PTHR21237 1 197 4.9E-60 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 SUPERFAMILY SSF51064 139 195 1.83E-16 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 173 192 1.3E-25 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 63 79 1.3E-25 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 146 161 1.3E-25 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 PRINTS PR00773 GrpE protein signature 91 106 1.3E-25 T 21-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Gene3D G3DSA:3.90.20.20 34 137 1.6E-32 T 21-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SDY_2787 5e8dd7584f5b3f84803dfd5fe0a762c0 197 Gene3D G3DSA:2.30.22.10 138 196 7.3E-24 T 21-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SDY_1498 621c5c773b54255872230bb9b39a2055 252 SMART SM01134 74 234 2.9E-59 T 21-04-2016 SDY_1498 621c5c773b54255872230bb9b39a2055 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_1498 621c5c773b54255872230bb9b39a2055 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-8 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1498 621c5c773b54255872230bb9b39a2055 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-8 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1498 621c5c773b54255872230bb9b39a2055 252 SMART SM00420 6 58 1.9E-25 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1498 621c5c773b54255872230bb9b39a2055 252 SUPERFAMILY SSF46785 4 71 1.78E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1498 621c5c773b54255872230bb9b39a2055 252 PANTHER PTHR30363 1 252 9.0E-217 T 21-04-2016 SDY_1498 621c5c773b54255872230bb9b39a2055 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.6E-17 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1498 621c5c773b54255872230bb9b39a2055 252 Gene3D G3DSA:3.40.50.1360 78 215 1.7E-12 T 21-04-2016 SDY_1498 621c5c773b54255872230bb9b39a2055 252 PANTHER PTHR30363:SF22 1 252 9.0E-217 T 21-04-2016 SDY_1498 621c5c773b54255872230bb9b39a2055 252 Gene3D G3DSA:1.10.10.10 4 59 6.2E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1498 621c5c773b54255872230bb9b39a2055 252 Pfam PF00455 DeoR C terminal sensor domain 77 233 5.3E-49 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_1498 621c5c773b54255872230bb9b39a2055 252 SUPERFAMILY SSF100950 76 234 3.35E-31 T 21-04-2016 SDY_0199 baddd6b1aaf458638bf2ef303f4f5224 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.782 T 21-04-2016 IPR022898 Ribonuclease HII GO:0004523 SDY_0199 baddd6b1aaf458638bf2ef303f4f5224 198 SUPERFAMILY SSF53098 3 195 1.97E-70 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0199 baddd6b1aaf458638bf2ef303f4f5224 198 Gene3D G3DSA:3.30.420.10 11 151 6.4E-49 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0199 baddd6b1aaf458638bf2ef303f4f5224 198 Pfam PF01351 Ribonuclease HII 13 188 5.7E-39 T 21-04-2016 IPR024567 Ribonuclease HII/HIII domain SDY_0199 baddd6b1aaf458638bf2ef303f4f5224 198 PANTHER PTHR10954 1 197 9.2E-85 T 21-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 SUPERFAMILY SSF52540 161 353 1.25E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 Pfam PF01018 GTP1/OBG 3 157 1.3E-60 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 Gene3D G3DSA:2.70.210.12 2 156 1.4E-60 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PIRSF PIRSF002401 1 376 2.6E-140 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PANTHER PTHR11702:SF3 1 378 1.1E-203 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 SUPERFAMILY SSF82051 2 157 1.12E-56 T 21-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 1.6E-148 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.3E-23 T 21-04-2016 IPR006073 GTP binding domain GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 PANTHER PTHR11702 1 378 1.1E-203 T 21-04-2016 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 Gene3D G3DSA:3.40.50.300 160 348 2.2E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 21-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SDY_3364 19c3eaf090c73ce88ffef9077e74212d 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.475 T 21-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Gene3D G3DSA:3.80.10.10 58 276 1.0E-42 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Gene3D G3DSA:1.20.58.90 494 566 3.6E-37 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Gene3D G3DSA:1.20.58.360 360 493 6.7E-58 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SUPERFAMILY SSF52058 20 248 2.27E-25 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 289 497 7.8E-71 T 21-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Pfam PF12468 Type III secretion system leucine rich repeat protein 7 51 1.1E-13 T 21-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 179 198 0.1 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 119 138 1.2E-4 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 79 98 0.53 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 99 118 0.0046 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 159 178 0.0043 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 SMART SM00364 139 158 2.6E-4 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 Gene3D G3DSA:1.20.1270.130 279 359 2.2E-37 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 PANTHER PTHR24365 471 483 3.8E-15 T 21-04-2016 SDY_2001 e953224dafb188c75e39d8b510b51d7f 571 PANTHER PTHR24365 55 244 3.8E-15 T 21-04-2016 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 SUPERFAMILY SSF51182 51 183 3.41E-30 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_1945 80f9398ec78d7f51d888303374d3524f 185 PANTHER PTHR10245:SF42 9 185 2.4E-101 T 21-04-2016 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 Gene3D G3DSA:1.10.260.40 7 74 5.7E-22 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 PANTHER PTHR10245 9 185 2.4E-101 T 21-04-2016 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 SUPERFAMILY SSF47413 8 73 2.68E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 SMART SM00530 11 66 1.1E-14 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 Pfam PF01381 Helix-turn-helix 13 66 1.9E-14 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1945 80f9398ec78d7f51d888303374d3524f 185 Gene3D G3DSA:2.60.120.10 75 183 2.6E-24 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1945 80f9398ec78d7f51d888303374d3524f 185 Pfam PF07883 Cupin domain 111 178 1.7E-17 T 21-04-2016 IPR013096 Cupin 2, conserved barrel SDY_3495 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 21-04-2016 IPR013005 50S ribosomal protein uL4 SDY_3495 af999efcbd0a2375432bf21906bd585c 201 PANTHER PTHR10746 11 200 1.1E-93 T 21-04-2016 IPR013005 50S ribosomal protein uL4 SDY_3495 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 21-04-2016 IPR013005 50S ribosomal protein uL4 SDY_3495 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 54 201 2.5E-59 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SDY_3495 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.0E-64 T 21-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SDY_3495 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 21-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 PANTHER PTHR21299:SF1 1 215 2.3E-119 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 SUPERFAMILY SSF52374 1 208 7.04E-90 T 21-04-2016 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 PANTHER PTHR21299 1 215 2.3E-119 T 21-04-2016 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 215 2.6E-105 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 Hamap MF_00158 Pantothenate synthetase [panC]. 1 213 30.579 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 Gene3D G3DSA:3.40.50.620 1 156 2.0E-74 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 Gene3D G3DSA:3.30.1300.10 161 215 5.1E-13 T 21-04-2016 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 48 7.0E-8 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_P191 2e6d1f05a5f10bcc98b0ea9e2a9d0cb6 216 Pfam PF02569 Pantoate-beta-alanine ligase 2 196 3.1E-89 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_1912 f5094f6e4bd802ea542745c14578f45d 423 PANTHER PTHR30508:SF0 30 418 9.0E-136 T 21-04-2016 SDY_1912 f5094f6e4bd802ea542745c14578f45d 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 1.6E-66 T 21-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SDY_1912 f5094f6e4bd802ea542745c14578f45d 423 PANTHER PTHR30508 30 418 9.0E-136 T 21-04-2016 SDY_1912 f5094f6e4bd802ea542745c14578f45d 423 SUPERFAMILY SSF101960 11 420 3.79E-111 T 21-04-2016 SDY_1912 f5094f6e4bd802ea542745c14578f45d 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 409 9.7E-88 T 21-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Gene3D G3DSA:3.30.1360.70 2 105 3.6E-35 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Pfam PF05746 DALR anticodon binding domain 460 577 2.6E-35 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 9.0E-26 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PANTHER PTHR11956:SF1 1 577 4.7E-274 T 21-04-2016 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 7.2E-22 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Gene3D G3DSA:1.10.730.10 454 577 5.2E-36 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 PANTHER PTHR11956 1 577 4.7E-274 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 SMART SM01016 5 87 7.8E-29 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 SUPERFAMILY SSF47323 454 577 3.34E-35 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 SMART SM00836 460 577 1.4E-36 T 21-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 3.2E-179 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 SUPERFAMILY SSF55190 2 100 1.83E-23 T 21-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Gene3D G3DSA:3.40.50.620 111 453 1.1E-118 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.625 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 2.6E-219 T 21-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SDY_1180 31f37ecf31ecaea741912e21f8151ab8 577 SUPERFAMILY SSF52374 110 454 2.41E-98 T 21-04-2016 SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 PANTHER PTHR18964 3 302 2.2E-104 T 21-04-2016 SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 PANTHER PTHR18964:SF123 3 302 2.2E-104 T 21-04-2016 SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 21-04-2016 IPR000600 ROK family SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 SUPERFAMILY SSF53067 3 300 1.09E-62 T 21-04-2016 SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 132 280 3.0E-49 T 21-04-2016 SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 Pfam PF00480 ROK family 3 301 5.9E-100 T 21-04-2016 IPR000600 ROK family SDY_0345 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 2 131 2.6E-37 T 21-04-2016 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 PANTHER PTHR21581:SF4 32 403 3.6E-209 T 21-04-2016 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.678452E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.678452E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.678452E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 SMART SM00936 292 383 1.8E-33 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.3E-101 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:3.40.710.10 37 290 1.1E-91 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF56601 10 292 6.71E-76 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 PANTHER PTHR21581 32 403 3.6E-209 T 21-04-2016 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 2.5E-24 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:2.60.410.10 292 383 4.0E-32 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0554 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF69189 292 385 7.85E-25 T 21-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2915 30159d6f4f7dc683c500769a8b674f46 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 5.6E-55 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH SDY_2915 30159d6f4f7dc683c500769a8b674f46 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 4.0E-76 T 21-04-2016 IPR010005 Formate hydrogenlyase maturation HycH SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 SUPERFAMILY SSF52922 702 885 1.74E-64 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 9.8E-10 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 SUPERFAMILY SSF52518 58 469 9.82E-144 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PIRSF PIRSF000156 1 887 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 Gene3D G3DSA:3.40.50.970 473 705 1.9E-120 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 21-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 Gene3D G3DSA:3.40.50.970 59 469 2.6E-157 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 SUPERFAMILY SSF52518 474 701 6.59E-99 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624:SF67 787 869 0.0 T 21-04-2016 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624:SF67 553 768 0.0 T 21-04-2016 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624:SF67 472 535 0.0 T 21-04-2016 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624:SF67 363 450 0.0 T 21-04-2016 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624:SF67 75 294 0.0 T 21-04-2016 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 Gene3D G3DSA:3.40.50.920 707 885 3.3E-77 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624 787 869 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624 553 768 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624 472 535 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624 363 450 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0144 fcd48d229c06010a92f300e5f08a7411 887 PANTHER PTHR11624 75 294 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_0559 416e6b328d255b232fc4d25449f34574 105 Gene3D G3DSA:3.30.460.10 4 105 4.1E-38 T 21-04-2016 SDY_0559 416e6b328d255b232fc4d25449f34574 105 PANTHER PTHR21043 1 105 1.9E-48 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SDY_0559 416e6b328d255b232fc4d25449f34574 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.806 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SDY_0559 416e6b328d255b232fc4d25449f34574 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.4E-38 T 21-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SDY_0559 416e6b328d255b232fc4d25449f34574 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.0E-29 T 21-04-2016 SDY_0559 416e6b328d255b232fc4d25449f34574 105 SUPERFAMILY SSF81301 4 105 1.59E-37 T 21-04-2016 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 SMART SM00411 1 90 3.1E-43 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 PANTHER PTHR33175:SF4 1 90 1.6E-59 T 21-04-2016 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 PANTHER PTHR33175 1 90 1.6E-59 T 21-04-2016 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-33 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_3726 4939a1cdd4b26c7d9053b02c16db7e41 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-37 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_1460 89cb08c8f784bf0027c96f6432201b75 237 PANTHER PTHR32552 2 232 5.8E-61 T 21-04-2016 SDY_1460 89cb08c8f784bf0027c96f6432201b75 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1460 89cb08c8f784bf0027c96f6432201b75 237 Gene3D G3DSA:3.30.420.10 66 226 3.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1460 89cb08c8f784bf0027c96f6432201b75 237 Pfam PF13276 HTH-like domain 5 47 3.7E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_1460 89cb08c8f784bf0027c96f6432201b75 237 SUPERFAMILY SSF53098 65 229 6.83E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1033 44694da1024c1fa5418007ba248dce98 216 Gene3D G3DSA:2.40.128.20 30 216 4.0E-87 T 21-04-2016 IPR012674 Calycin SDY_1033 44694da1024c1fa5418007ba248dce98 216 SUPERFAMILY SSF50814 31 216 1.62E-79 T 21-04-2016 IPR011038 Calycin-like SDY_1033 44694da1024c1fa5418007ba248dce98 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 1.3E-83 T 21-04-2016 IPR015304 ZinT domain GO:0008270 SDY_1361 68c10509da07b1f414db29a661c87670 249 SUPERFAMILY SSF100950 67 229 6.84E-29 T 21-04-2016 SDY_1361 68c10509da07b1f414db29a661c87670 249 PANTHER PTHR30363:SF16 1 248 3.5E-171 T 21-04-2016 SDY_1361 68c10509da07b1f414db29a661c87670 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 8.7E-16 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1361 68c10509da07b1f414db29a661c87670 249 SMART SM01134 67 228 1.4E-56 T 21-04-2016 SDY_1361 68c10509da07b1f414db29a661c87670 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_1361 68c10509da07b1f414db29a661c87670 249 Gene3D G3DSA:1.10.10.10 2 52 1.7E-9 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1361 68c10509da07b1f414db29a661c87670 249 PANTHER PTHR30363 1 248 3.5E-171 T 21-04-2016 SDY_1361 68c10509da07b1f414db29a661c87670 249 SUPERFAMILY SSF46785 1 60 3.04E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1361 68c10509da07b1f414db29a661c87670 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 7.7E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1361 68c10509da07b1f414db29a661c87670 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 7.7E-5 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1361 68c10509da07b1f414db29a661c87670 249 Gene3D G3DSA:3.40.50.1360 70 210 1.8E-10 T 21-04-2016 SDY_1361 68c10509da07b1f414db29a661c87670 249 SMART SM00420 4 56 2.0E-24 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_1361 68c10509da07b1f414db29a661c87670 249 Pfam PF00455 DeoR C terminal sensor domain 69 227 9.8E-46 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 8.2E-183 T 21-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PANTHER PTHR22939 9 352 3.4E-178 T 21-04-2016 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 Pfam PF13180 PDZ domain 279 347 4.4E-13 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 1.7E-28 T 21-04-2016 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 SUPERFAMILY SSF50156 256 352 1.97E-20 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 2.4E-47 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.40.10.10 148 258 1.7E-38 T 21-04-2016 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 PANTHER PTHR22939:SF93 9 352 3.4E-178 T 21-04-2016 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 SMART SM00228 257 339 2.2E-10 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.40.10.10 34 138 1.9E-31 T 21-04-2016 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.30.42.10 259 353 1.9E-26 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3411 d93ed33f63ae8ebec2b3f08782629cbc 355 SUPERFAMILY SSF50494 47 254 1.68E-60 T 21-04-2016 IPR009003 Peptidase S1, PA clan SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 21-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 PANTHER PTHR23409 9 315 1.4E-107 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 316 1.6E-140 T 21-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 Gene3D G3DSA:1.10.620.20 7 280 1.1E-89 T 21-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 9.0E-84 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 PIRSF PIRSF000355 2 316 2.4E-79 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2869 16a37e26b6122fd009eeb0f5833a3c48 322 SUPERFAMILY SSF47240 6 315 5.84E-101 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_1318 953f0df69b08bd9ecb9e702bbd0bd6ef 179 PANTHER PTHR36917:SF1 1 178 2.7E-83 T 21-04-2016 SDY_1318 953f0df69b08bd9ecb9e702bbd0bd6ef 179 Pfam PF04279 Intracellular septation protein A 1 175 1.7E-72 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SDY_1318 953f0df69b08bd9ecb9e702bbd0bd6ef 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 3.3E-75 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SDY_1318 953f0df69b08bd9ecb9e702bbd0bd6ef 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.457 T 21-04-2016 IPR006008 Intracellular septation protein A GO:0016021 SDY_1318 953f0df69b08bd9ecb9e702bbd0bd6ef 179 PANTHER PTHR36917 1 178 2.7E-83 T 21-04-2016 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 42.968 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 4.8E-137 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 PANTHER PTHR10108:SF809 4 241 6.3E-117 T 21-04-2016 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 PANTHER PTHR10108 4 241 6.3E-117 T 21-04-2016 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 SUPERFAMILY SSF53335 20 242 1.09E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 Gene3D G3DSA:3.40.50.150 19 241 6.0E-65 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 Pfam PF13649 Methyltransferase domain 60 158 3.7E-14 T 21-04-2016 SDY_1169 dabcf7fa2213e7eb9409a93d0890a8e5 247 PIRSF PIRSF006325 1 243 3.8E-135 T 21-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 SUPERFAMILY SSF53383 2 396 1.21E-114 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.8E-84 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 4.0E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 4.0E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 4.0E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 4.0E-37 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PANTHER PTHR11879:SF7 1 397 0.0 T 21-04-2016 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 Gene3D G3DSA:3.40.640.10 46 316 2.6E-103 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_4520 6e47d809757100830d2f30a87bcc3a75 397 PANTHER PTHR11879 1 397 0.0 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 SUPERFAMILY SSF56801 14 555 9.81E-155 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Pfam PF00501 AMP-binding enzyme 29 460 2.9E-114 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.30.300.30 455 552 6.3E-30 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.40.50.980 185 216 4.1E-43 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.40.50.980 23 152 4.1E-43 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 PANTHER PTHR24096 176 553 9.5E-187 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 PANTHER PTHR24096 14 153 9.5E-187 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 2.7E-18 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:3.40.50.980 217 379 8.7E-41 T 21-04-2016 SDY_1709 d207538cafe2e2d03a7a8f3bb3e8705a 561 Gene3D G3DSA:2.30.38.10 380 451 4.9E-31 T 21-04-2016 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.7E-50 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 PANTHER PTHR30309 1 205 9.2E-103 T 21-04-2016 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 8.0E-83 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 SMART SM01207 10 185 1.9E-86 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 PANTHER PTHR30309:SF0 1 205 9.2E-103 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SDY_3242 6eef03657d134c52e9725ddeea8523f6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.447 T 21-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 SMART SM00941 350 424 6.5E-30 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 54.564 T 21-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 PIRSF PIRSF000478 1 439 2.4E-154 T 21-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 SUPERFAMILY SSF47648 3 70 1.31E-21 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 21-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Gene3D G3DSA:1.20.970.10 2 68 6.5E-30 T 21-04-2016 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.8E-19 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Gene3D G3DSA:3.40.1030.10 75 337 5.4E-111 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 2.4E-25 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 SUPERFAMILY SSF54680 337 438 5.76E-33 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 PANTHER PTHR10515:SF0 2 440 1.5E-228 T 21-04-2016 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 PANTHER PTHR10515 2 440 1.5E-228 T 21-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Gene3D G3DSA:3.90.1170.30 338 432 5.0E-37 T 21-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 7.8E-238 T 21-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 SUPERFAMILY SSF52418 74 334 1.05E-88 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 2.0E-53 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_4642 0e4c83b4db0d1b76b650da80ec699a69 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 4.3E-171 T 21-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 Gene3D G3DSA:3.90.180.10 1 164 6.6E-59 T 21-04-2016 IPR011032 GroES-like SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 Gene3D G3DSA:3.40.50.720 165 282 3.4E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 Pfam PF00107 Zinc-binding dehydrogenase 172 298 3.9E-28 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 PANTHER PTHR11695 12 343 1.8E-148 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 PANTHER PTHR11695:SF498 12 343 1.8E-148 T 21-04-2016 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 SUPERFAMILY SSF50129 1 169 1.67E-46 T 21-04-2016 IPR011032 GroES-like SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 SUPERFAMILY SSF51735 135 302 3.94E-39 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.2E-28 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_1608 f7a43d61f88d17d959eae88fac7bfd2a 365 SMART SM00829 8 332 7.0E-7 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_0014 e211ce712b660dc8f11916248be29304 376 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-33 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-33 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-33 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-33 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 3.3E-143 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 PANTHER PTHR24078:SF231 1 356 4.2E-178 T 21-04-2016 SDY_0014 e211ce712b660dc8f11916248be29304 376 Gene3D G3DSA:2.60.260.20 207 251 9.0E-22 T 21-04-2016 SDY_0014 e211ce712b660dc8f11916248be29304 376 Gene3D G3DSA:2.60.260.20 103 137 9.0E-22 T 21-04-2016 SDY_0014 e211ce712b660dc8f11916248be29304 376 SUPERFAMILY SSF49493 256 341 6.02E-21 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 Gene3D G3DSA:1.10.287.110 1 102 4.1E-38 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 Gene3D G3DSA:2.10.230.10 138 206 5.4E-27 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 SUPERFAMILY SSF57938 131 207 3.14E-24 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 SMART SM00271 4 62 1.5E-31 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 PANTHER PTHR24078 1 356 4.2E-178 T 21-04-2016 SDY_0014 e211ce712b660dc8f11916248be29304 376 Pfam PF00684 DnaJ central domain 144 204 3.8E-16 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 SUPERFAMILY SSF49493 210 256 3.92E-20 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 SUPERFAMILY SSF46565 1 106 9.29E-37 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.966 T 21-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 Pfam PF01556 DnaJ C terminal domain 118 330 3.1E-45 T 21-04-2016 IPR002939 Chaperone DnaJ, C-terminal SDY_0014 e211ce712b660dc8f11916248be29304 376 SUPERFAMILY SSF49493 111 166 3.92E-20 T 21-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SDY_0014 e211ce712b660dc8f11916248be29304 376 Gene3D G3DSA:2.60.260.20 253 330 3.2E-23 T 21-04-2016 SDY_0014 e211ce712b660dc8f11916248be29304 376 Pfam PF00226 DnaJ domain 5 67 8.3E-29 T 21-04-2016 IPR001623 DnaJ domain SDY_0014 e211ce712b660dc8f11916248be29304 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 21-04-2016 IPR018253 DnaJ domain, conserved site SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Pfam PF00158 Sigma-54 interaction domain 140 306 1.4E-70 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 PANTHER PTHR32071:SF15 6 469 3.5E-259 T 21-04-2016 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Gene3D G3DSA:3.40.50.2300 6 132 1.2E-39 T 21-04-2016 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.9E-15 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 21-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Gene3D G3DSA:3.40.50.300 138 312 2.7E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 SMART SM00448 4 115 1.1E-38 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Pfam PF00072 Response regulator receiver domain 6 115 5.9E-31 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.3E-249 T 21-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 SUPERFAMILY SSF52540 139 382 9.46E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Gene3D G3DSA:1.10.10.60 399 469 5.0E-24 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 SMART SM00382 160 311 5.6E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 Gene3D G3DSA:1.10.8.60 313 391 2.0E-24 T 21-04-2016 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 SUPERFAMILY SSF52172 6 185 7.26E-49 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 SUPERFAMILY SSF46689 380 469 5.73E-24 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3875 2e4923d18ec24bccc33a37b0a1ac41dd 469 PANTHER PTHR32071 6 469 3.5E-259 T 21-04-2016 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PANTHER PTHR22594:SF7 15 324 2.9E-161 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.938 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 3.4E-6 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 3.4E-6 T 21-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PANTHER PTHR22594 15 324 2.9E-161 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 7.4E-47 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 SUPERFAMILY SSF55681 12 320 9.38E-85 T 21-04-2016 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Gene3D G3DSA:3.30.930.10 15 320 1.3E-74 T 21-04-2016 SDY_4399 fe3f3fe9e9fd4a541905a78c2ba045f0 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.0E-132 T 21-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 PANTHER PTHR37481 1 188 3.4E-72 T 21-04-2016 SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 8.6E-53 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.9E-54 T 21-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 PIRSF PIRSF028513 1 186 2.8E-41 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 PANTHER PTHR37481:SF1 1 188 3.4E-72 T 21-04-2016 SDY_3380 e7b335ee1a6eca37cc7ce70d47aeab74 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.913 T 21-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SDY_2490 686577aac277f737d875fe198ea6460a 164 SUPERFAMILY SSF116960 1 164 1.1E-70 T 21-04-2016 SDY_2490 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.287.680 1 52 2.4E-31 T 21-04-2016 IPR023145 YfbU, helix-hairpin domain SDY_2490 686577aac277f737d875fe198ea6460a 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU SDY_2490 686577aac277f737d875fe198ea6460a 164 Pfam PF03887 YfbU domain 1 164 2.9E-69 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU SDY_2490 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.3190.10 53 164 1.4E-51 T 21-04-2016 IPR023146 YfbU, alpha-helical bundle domain SDY_2490 686577aac277f737d875fe198ea6460a 164 PIRSF PIRSF006272 1 164 2.9E-80 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU SDY_2490 686577aac277f737d875fe198ea6460a 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.884 T 21-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU SDY_0483 cbe996dfcec516007332ca68676251b4 351 Pfam PF11798 IMS family HHH motif 166 197 1.3E-7 T 21-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 346 3.4E-9 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.235 T 21-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0483 cbe996dfcec516007332ca68676251b4 351 SUPERFAMILY SSF56672 1 234 4.09E-94 T 21-04-2016 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Gene3D G3DSA:1.10.150.20 165 237 2.9E-25 T 21-04-2016 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Gene3D G3DSA:3.30.1490.100 238 349 2.4E-44 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0483 cbe996dfcec516007332ca68676251b4 351 PANTHER PTHR11076 1 347 1.9E-226 T 21-04-2016 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Pfam PF00817 impB/mucB/samB family 7 154 2.8E-49 T 21-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0483 cbe996dfcec516007332ca68676251b4 351 Gene3D G3DSA:3.30.70.270 66 164 8.4E-37 T 21-04-2016 SDY_0483 cbe996dfcec516007332ca68676251b4 351 PANTHER PTHR11076:SF32 1 347 1.9E-226 T 21-04-2016 SDY_0483 cbe996dfcec516007332ca68676251b4 351 SUPERFAMILY SSF100879 241 349 5.69E-27 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1697 baa4308cec92c44ae312c56d9e35f7bc 119 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 8.0E-24 T 21-04-2016 IPR015392 Domain of unknown function DUF1971 SDY_1697 baa4308cec92c44ae312c56d9e35f7bc 119 PIRSF PIRSF020632 1 119 3.8E-57 T 21-04-2016 IPR014510 Tellurite resistance predicted, YeaR SDY_1697 baa4308cec92c44ae312c56d9e35f7bc 119 Gene3D G3DSA:2.60.120.10 1 117 3.2E-45 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1697 baa4308cec92c44ae312c56d9e35f7bc 119 SUPERFAMILY SSF51197 1 106 1.0E-34 T 21-04-2016 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 21-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 Gene3D G3DSA:2.40.100.10 27 189 7.3E-56 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 6.1E-50 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 3.3E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 3.3E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 3.3E-10 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 SUPERFAMILY SSF50891 26 189 1.9E-58 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 PANTHER PTHR11071 32 189 1.8E-68 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SDY_3525 56c7a89a3b764d7c0df802d1f3000126 190 PANTHER PTHR11071:SF265 32 189 1.8E-68 T 21-04-2016 SDY_4253 2fc6633efe6b5bbb0ab15a0df9f32c61 450 SUPERFAMILY SSF111283 17 449 4.19E-133 T 21-04-2016 SDY_4253 2fc6633efe6b5bbb0ab15a0df9f32c61 450 PANTHER PTHR30624:SF1 6 450 2.1E-197 T 21-04-2016 SDY_4253 2fc6633efe6b5bbb0ab15a0df9f32c61 450 PANTHER PTHR30624 6 450 2.1E-197 T 21-04-2016 SDY_4253 2fc6633efe6b5bbb0ab15a0df9f32c61 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 1.8E-54 T 21-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0006 571650dea65d67679759361a741e887b 258 PANTHER PTHR30283:SF3 2 254 2.5E-124 T 21-04-2016 SDY_0006 571650dea65d67679759361a741e887b 258 PANTHER PTHR30283 2 254 2.5E-124 T 21-04-2016 SDY_0006 571650dea65d67679759361a741e887b 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.306 T 21-04-2016 IPR005583 Peroxide stress protein YaaA SDY_0006 571650dea65d67679759361a741e887b 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 7.5E-91 T 21-04-2016 IPR005583 Peroxide stress protein YaaA SDY_4480 b9734dfbd4b672e3442ab252b3178f59 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.5E-36 T 21-04-2016 IPR008878 Transposase IS66, Orf2 SDY_4480 b9734dfbd4b672e3442ab252b3178f59 115 PANTHER PTHR36455 2 108 1.3E-36 T 21-04-2016 SDY_4480 b9734dfbd4b672e3442ab252b3178f59 115 PANTHER PTHR36455:SF1 2 108 1.3E-36 T 21-04-2016 SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 SUPERFAMILY SSF56235 1 196 2.92E-58 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 SUPERFAMILY SSF52402 210 479 4.19E-76 T 21-04-2016 SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 PANTHER PTHR11772:SF11 2 538 0.0 T 21-04-2016 SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 4.9E-128 T 21-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 Gene3D G3DSA:3.40.50.620 192 510 1.0E-119 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 Gene3D G3DSA:3.60.20.10 2 191 2.9E-68 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 6.5E-42 T 21-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 PANTHER PTHR11772 2 538 0.0 T 21-04-2016 SDY_0608 b89340b00d2ce151e1f6aaca90b913bf 554 Pfam PF00733 Asparagine synthase 211 511 5.0E-100 T 21-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SDY_3972 eb99266eaf6e232488d0bccae07d8fae 301 Pfam PF00665 Integrase core domain 125 243 4.0E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3972 eb99266eaf6e232488d0bccae07d8fae 301 Gene3D G3DSA:3.30.420.10 119 282 2.9E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3972 eb99266eaf6e232488d0bccae07d8fae 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_3972 eb99266eaf6e232488d0bccae07d8fae 301 SUPERFAMILY SSF53098 125 291 1.64E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 Gene3D G3DSA:3.40.50.300 115 275 2.6E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 Pfam PF03193 Protein of unknown function, DUF258 100 276 5.3E-57 T 21-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.951 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 334 3.9E-101 T 21-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 PANTHER PTHR32120 3 346 2.2E-168 T 21-04-2016 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 SUPERFAMILY SSF52540 114 340 1.56E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 Gene3D G3DSA:1.10.40.50 276 345 4.7E-26 T 21-04-2016 SDY_4431 ea677c193a7853f121d4331a8d042ee9 350 PANTHER PTHR32120:SF2 3 346 2.2E-168 T 21-04-2016 SDY_4058 01a229a59899881724a8c0aba99b549a 331 PANTHER PTHR13778:SF10 18 309 8.6E-41 T 21-04-2016 SDY_4058 01a229a59899881724a8c0aba99b549a 331 Gene3D G3DSA:3.90.550.10 23 296 5.2E-59 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4058 01a229a59899881724a8c0aba99b549a 331 Pfam PF01501 Glycosyl transferase family 8 24 273 1.6E-63 T 21-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SDY_4058 01a229a59899881724a8c0aba99b549a 331 Pfam PF08437 Glycosyl transferase family 8 C-terminal 275 331 2.4E-22 T 21-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 SDY_4058 01a229a59899881724a8c0aba99b549a 331 PANTHER PTHR13778 18 309 8.6E-41 T 21-04-2016 SDY_4058 01a229a59899881724a8c0aba99b549a 331 SUPERFAMILY SSF53448 24 294 5.06E-59 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_0335 111a14e2f39729750ab3bfc622cd4712 457 PANTHER PTHR11785:SF352 1 452 0.0 T 21-04-2016 SDY_0335 111a14e2f39729750ab3bfc622cd4712 457 PIRSF PIRSF006060 1 456 2.2E-77 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0335 111a14e2f39729750ab3bfc622cd4712 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_0335 111a14e2f39729750ab3bfc622cd4712 457 Pfam PF00324 Amino acid permease 15 451 4.1E-105 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_0335 111a14e2f39729750ab3bfc622cd4712 457 PANTHER PTHR11785 1 452 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 PANTHER PTHR30586 1 220 3.7E-143 T 21-04-2016 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.355 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 PANTHER PTHR30586:SF0 1 220 3.7E-143 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 6.0E-62 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 4.9E-81 T 21-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 SDY_1855 3969d74bdfc4d5f843c270fd981333f7 231 PIRSF PIRSF006102 1 219 2.8E-79 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 SUPERFAMILY SSF51658 1 277 1.13E-104 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 45.206 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 PANTHER PTHR21445 1 282 3.2E-158 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 PANTHER PTHR21445:SF0 1 282 3.2E-158 T 21-04-2016 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 Gene3D G3DSA:3.20.20.150 1 278 4.6E-122 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 6.1E-118 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 SMART SM00518 3 279 3.6E-146 T 21-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 6.6E-44 T 21-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SDY_2107 a6ae3b93949f7b83e1f48a1c29a8077d 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 21-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 PANTHER PTHR33507:SF3 1 152 3.1E-60 T 21-04-2016 SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 PANTHER PTHR33507 1 152 3.1E-60 T 21-04-2016 SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 Gene3D G3DSA:1.20.1250.20 34 84 5.3E-4 T 21-04-2016 SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 9.0E-24 T 21-04-2016 IPR002810 NfeD-like, C-terminal domain SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 Gene3D G3DSA:2.40.50.140 94 148 1.0E-10 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0411 9e14f3d76469485a67cf12d1f5304404 152 SUPERFAMILY SSF141322 96 149 7.85E-5 T 21-04-2016 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 PIRSF PIRSF006092 1 157 1.3E-45 T 21-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 54.298 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 PANTHER PTHR30437 1 155 1.5E-92 T 21-04-2016 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Gene3D G3DSA:3.10.50.30 76 155 6.9E-27 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Pfam PF03449 Transcription elongation factor, N-terminal 6 74 6.5E-27 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 SUPERFAMILY SSF54534 80 155 3.53E-20 T 21-04-2016 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.83 T 21-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 SUPERFAMILY SSF46557 3 78 3.66E-28 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 PANTHER PTHR30437:SF6 1 155 1.5E-92 T 21-04-2016 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 1.3E-22 T 21-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.1E-88 T 21-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 21-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SDY_3670 b223466ef33eda5ba8926cac5d29793a 158 Gene3D G3DSA:1.10.287.180 1 75 5.8E-27 T 21-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 PANTHER PTHR12029:SF45 1 189 2.1E-76 T 21-04-2016 SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 Gene3D G3DSA:3.40.1280.10 2 174 5.7E-49 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 6.4E-24 T 21-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.6E-36 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 PANTHER PTHR12029 1 189 2.1E-76 T 21-04-2016 SDY_4083 1ea3f0c0d5bb7db72d9bac9fbfbc2eab 229 SUPERFAMILY SSF75217 4 174 4.91E-49 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 SUPERFAMILY SSF47413 5 64 3.38E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 SMART SM00354 6 76 2.9E-33 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 PANTHER PTHR30146 5 339 2.6E-100 T 21-04-2016 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 Gene3D G3DSA:3.40.50.2300 179 325 1.3E-36 T 21-04-2016 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 Gene3D G3DSA:3.40.50.2300 59 178 1.6E-35 T 21-04-2016 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 341 3.1E-101 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 PANTHER PTHR30146:SF4 5 339 2.6E-100 T 21-04-2016 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 9.0E-19 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 Gene3D G3DSA:1.10.260.40 7 58 2.8E-22 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1841 2f4c5deef26fe06c51e6e664f3c19963 342 SUPERFAMILY SSF53822 63 338 3.37E-52 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 SUPERFAMILY SSF53067 7 128 2.72E-37 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 PANTHER PTHR30005:SF2 1 494 0.0 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 Gene3D G3DSA:3.30.420.150 128 300 9.2E-52 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.175 T 21-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 PANTHER PTHR30005 1 494 0.0 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 3.2E-102 T 21-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 SUPERFAMILY SSF109604 307 493 4.39E-46 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 Gene3D G3DSA:3.30.420.40 4 127 3.0E-45 T 21-04-2016 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 PIRSF PIRSF001267 1 494 2.6E-188 T 21-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SDY_3970 9ed53b74be3eead4b98f730ee3a60694 494 SUPERFAMILY SSF53067 132 300 1.75E-41 T 21-04-2016 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 5.9E-212 T 21-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 SUPERFAMILY SSF53383 5 381 1.2E-118 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 PANTHER PTHR11808 1 385 6.8E-185 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 Gene3D G3DSA:3.90.1150.10 250 383 6.8E-48 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 1.0E-141 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 Gene3D G3DSA:3.40.640.10 5 246 4.7E-88 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 PIRSF PIRSF001434 1 384 1.4E-130 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3774 983dd86bd8258c05e14248df9be1eb28 386 PANTHER PTHR11808:SF15 1 385 6.8E-185 T 21-04-2016 SDY_3141 b21c68f751c744011606594b853a302b 663 Gene3D G3DSA:3.40.50.970 4 320 4.6E-134 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3141 b21c68f751c744011606594b853a302b 663 SUPERFAMILY SSF52922 533 663 5.23E-44 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_3141 b21c68f751c744011606594b853a302b 663 PANTHER PTHR11624:SF85 334 663 0.0 T 21-04-2016 SDY_3141 b21c68f751c744011606594b853a302b 663 PANTHER PTHR11624:SF85 1 310 0.0 T 21-04-2016 SDY_3141 b21c68f751c744011606594b853a302b 663 PANTHER PTHR11624 334 663 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_3141 b21c68f751c744011606594b853a302b 663 PANTHER PTHR11624 1 310 0.0 T 21-04-2016 IPR033247 Transketolase family SDY_3141 b21c68f751c744011606594b853a302b 663 Gene3D G3DSA:3.40.50.920 538 663 2.0E-53 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_3141 b21c68f751c744011606594b853a302b 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.8E-44 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_3141 b21c68f751c744011606594b853a302b 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_3141 b21c68f751c744011606594b853a302b 663 SUPERFAMILY SSF52518 336 526 4.53E-67 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3141 b21c68f751c744011606594b853a302b 663 Gene3D G3DSA:3.40.50.970 327 533 1.7E-80 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3141 b21c68f751c744011606594b853a302b 663 SMART SM00861 355 525 8.1E-66 T 21-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SDY_3141 b21c68f751c744011606594b853a302b 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.3E-20 T 21-04-2016 IPR033248 Transketolase, C-terminal domain SDY_3141 b21c68f751c744011606594b853a302b 663 SUPERFAMILY SSF52518 5 331 1.58E-122 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3141 b21c68f751c744011606594b853a302b 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 21-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_3141 b21c68f751c744011606594b853a302b 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.2E-174 T 21-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SDY_3141 b21c68f751c744011606594b853a302b 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 21-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 SUPERFAMILY SSF53738 156 256 3.49E-30 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 SUPERFAMILY SSF53738 258 365 2.28E-31 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 PANTHER PTHR22573 1 444 8.1E-187 T 21-04-2016 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Gene3D G3DSA:3.40.120.10 4 151 2.5E-46 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 8.2E-15 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 8.2E-15 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 8.2E-15 T 21-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.768 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Gene3D G3DSA:3.30.310.50 359 443 1.6E-16 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Gene3D G3DSA:3.40.120.10 251 358 2.1E-33 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 6.9E-197 T 21-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 21-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Gene3D G3DSA:3.40.120.10 176 250 5.1E-27 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 PANTHER PTHR22573:SF15 1 444 8.1E-187 T 21-04-2016 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.5E-21 T 21-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 SUPERFAMILY SSF55957 357 444 3.53E-21 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 3.0E-45 T 21-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 SUPERFAMILY SSF53738 2 181 8.24E-49 T 21-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 9.4E-33 T 21-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_3357 7ac2ea7e8074beb2119d16a2418f12fd 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 5.6E-15 T 21-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SDY_2970 d95fe802675ee6f26dac4b3be7337a9a 191 SUPERFAMILY SSF110391 11 185 2.75E-56 T 21-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SDY_2970 d95fe802675ee6f26dac4b3be7337a9a 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 184 8.8E-63 T 21-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SDY_2970 d95fe802675ee6f26dac4b3be7337a9a 191 PANTHER PTHR35787 2 190 9.1E-73 T 21-04-2016 SDY_2970 d95fe802675ee6f26dac4b3be7337a9a 191 PIRSF PIRSF016897 1 190 1.2E-68 T 21-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SDY_2970 d95fe802675ee6f26dac4b3be7337a9a 191 Gene3D G3DSA:3.20.20.400 3 186 8.5E-69 T 21-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.7E-181 T 21-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Pfam PF03477 ATP cone domain 6 92 2.8E-15 T 21-04-2016 IPR005144 ATP-cone domain SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PANTHER PTHR11573 6 752 0.0 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PANTHER PTHR11573:SF17 6 752 0.0 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 SUPERFAMILY SSF51998 222 740 1.74E-170 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 SUPERFAMILY SSF48168 10 221 4.71E-74 T 21-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-39 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.9E-12 T 21-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Gene3D G3DSA:3.20.70.20 129 344 8.7E-44 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Gene3D G3DSA:3.20.70.20 398 559 8.7E-44 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Gene3D G3DSA:3.20.70.20 610 700 8.7E-44 T 21-04-2016 SDY_2428 f1ae47abfb3bfa04f476ff4a6d15de79 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 5.8E-120 T 21-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PANTHER PTHR11019:SF92 133 248 7.5E-177 T 21-04-2016 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PANTHER PTHR11019:SF92 1 117 7.5E-177 T 21-04-2016 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.4E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.4E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PANTHER PTHR11019 133 248 7.5E-177 T 21-04-2016 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 PANTHER PTHR11019 1 117 7.5E-177 T 21-04-2016 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 Pfam PF12833 Helix-turn-helix domain 164 242 5.4E-15 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 Gene3D G3DSA:1.10.10.60 193 243 1.3E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 SMART SM00342 158 240 1.6E-30 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3533 2fd165af9c99b9be1c96e42165864ebc 274 SUPERFAMILY SSF46689 193 243 1.16E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:3.40.50.2300 9 156 5.9E-39 T 21-04-2016 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 PANTHER PTHR26402 11 240 1.2E-140 T 21-04-2016 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00072 Response regulator receiver domain 13 121 1.1E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 PANTHER PTHR26402:SF530 11 240 1.2E-140 T 21-04-2016 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 1.6E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF52172 6 138 9.96E-40 T 21-04-2016 IPR011006 CheY-like superfamily SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF46894 142 234 3.97E-26 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:1.10.10.10 157 235 3.5E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00862 156 232 2.2E-25 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_2186 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00448 11 121 6.2E-39 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 PANTHER PTHR18964:SF2 13 385 4.3E-216 T 21-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 Gene3D G3DSA:3.40.50.2000 225 385 7.6E-68 T 21-04-2016 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 SUPERFAMILY SSF53756 15 385 9.99E-143 T 21-04-2016 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 PANTHER PTHR18964 13 385 4.3E-216 T 21-04-2016 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 15 386 5.7E-187 T 21-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 Gene3D G3DSA:3.40.50.2000 14 224 7.2E-90 T 21-04-2016 SDY_3962 a0772096f2cba140b424e28bf897dc17 390 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 36 384 2.9E-129 T 21-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SDY_3962 a0772096f2cba140b424e28bf897dc17 390 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 30 388 66.222 T 21-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 3 77 8.4E-37 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.2E-17 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 PANTHER PTHR20863 4 73 7.3E-32 T 21-04-2016 SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_2056 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 21-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 274 9.1E-30 T 21-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 SUPERFAMILY SSF52467 190 310 2.81E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 PANTHER PTHR10909 78 308 2.3E-83 T 21-04-2016 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 PIRSF PIRSF000089 3 313 7.4E-86 T 21-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 Pfam PF01012 Electron transfer flavoprotein domain 42 169 1.7E-14 T 21-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 SUPERFAMILY SSF52402 7 169 1.26E-22 T 21-04-2016 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 PANTHER PTHR10909:SF328 78 308 2.3E-83 T 21-04-2016 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 Gene3D G3DSA:3.40.50.620 5 171 1.3E-24 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 59.45 T 21-04-2016 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 UniPathway: UPA00117 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 SMART SM00893 7 180 3.5E-13 T 21-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 21-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site SDY_0064 7d4edd829fd0d500674f9714d2726be0 313 Gene3D G3DSA:3.40.50.1220 185 311 1.0E-48 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_3998 85d0b5cbe7ff0039e73ebdac915dc891 131 PANTHER PTHR33293 4 126 4.2E-23 T 21-04-2016 SDY_3998 85d0b5cbe7ff0039e73ebdac915dc891 131 Pfam PF03400 IS1 transposase 2 131 9.2E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4406 85d0b5cbe7ff0039e73ebdac915dc891 131 PANTHER PTHR33293 4 126 4.2E-23 T 21-04-2016 SDY_4406 85d0b5cbe7ff0039e73ebdac915dc891 131 Pfam PF03400 IS1 transposase 2 131 9.2E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3349 4065641b410de42ba87d75d453d9c75c 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.786 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SDY_3349 4065641b410de42ba87d75d453d9c75c 150 PANTHER PTHR33867:SF1 1 150 4.9E-60 T 21-04-2016 SDY_3349 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:2.30.30.180 87 147 1.3E-13 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SDY_3349 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF75420 3 82 4.45E-25 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SDY_3349 4065641b410de42ba87d75d453d9c75c 150 Pfam PF02576 Putative ribosome maturation factor RimP 12 146 6.8E-49 T 21-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SDY_3349 4065641b410de42ba87d75d453d9c75c 150 PANTHER PTHR33867 1 150 4.9E-60 T 21-04-2016 SDY_3349 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF74942 83 150 3.4E-17 T 21-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SDY_3349 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:3.30.300.70 2 79 2.6E-33 T 21-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SDY_2494 4e183d2423967bfd2ba5be700829aabd 506 PANTHER PTHR10283 91 346 3.8E-156 T 21-04-2016 SDY_2494 4e183d2423967bfd2ba5be700829aabd 506 PANTHER PTHR10283 363 497 3.8E-156 T 21-04-2016 SDY_2494 4e183d2423967bfd2ba5be700829aabd 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 1.6E-164 T 21-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 SDY_2494 4e183d2423967bfd2ba5be700829aabd 506 PANTHER PTHR10283:SF43 91 346 3.8E-156 T 21-04-2016 SDY_2494 4e183d2423967bfd2ba5be700829aabd 506 PANTHER PTHR10283:SF43 363 497 3.8E-156 T 21-04-2016 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 Gene3D G3DSA:2.70.98.10 9 343 7.4E-116 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 5.5E-149 T 21-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 PIRSF PIRSF005096 2 346 2.7E-127 T 21-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 SUPERFAMILY SSF74650 5 343 3.7E-107 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 PANTHER PTHR10091:SF0 8 346 5.0E-143 T 21-04-2016 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 21-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 Pfam PF01263 Aldose 1-epimerase 17 342 3.3E-91 T 21-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SDY_0703 b86005c0dac6b4213e78afc8eee43106 346 PANTHER PTHR10091 8 346 5.0E-143 T 21-04-2016 SDY_3300 2172d1fb030fbbca1a66236036447b0f 436 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 34.796 T 21-04-2016 IPR021144 Uncharacterised protein family UPF0597 SDY_3300 2172d1fb030fbbca1a66236036447b0f 436 PANTHER PTHR30501 2 436 1.1E-142 T 21-04-2016 SDY_3300 2172d1fb030fbbca1a66236036447b0f 436 PANTHER PTHR30501:SF2 2 436 1.1E-142 T 21-04-2016 SDY_3300 2172d1fb030fbbca1a66236036447b0f 436 PIRSF PIRSF006054 5 435 2.6E-182 T 21-04-2016 IPR021144 Uncharacterised protein family UPF0597 SDY_3300 2172d1fb030fbbca1a66236036447b0f 436 Pfam PF03313 Serine dehydratase alpha chain 176 428 1.7E-46 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 Gene3D G3DSA:3.60.120.10 99 389 2.7E-82 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 PANTHER PTHR11236 111 391 3.0E-171 T 21-04-2016 SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 PANTHER PTHR11236:SF21 111 391 3.0E-171 T 21-04-2016 SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 101 387 1.8E-84 T 21-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 Pfam PF00425 chorismate binding enzyme 126 380 7.0E-69 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SDY_0524 5b883d2a2c2e9dc076f0d304176c5452 391 SUPERFAMILY SSF56322 13 389 9.68E-88 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 PIRSF PIRSF000460 2 815 7.6E-235 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 Gene3D G3DSA:3.40.50.2000 11 479 5.8E-209 T 21-04-2016 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 SUPERFAMILY SSF53756 9 814 0.0 T 21-04-2016 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 PANTHER PTHR11468 13 815 0.0 T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 21-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 Gene3D G3DSA:3.40.50.2000 480 795 4.8E-142 T 21-04-2016 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 21-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SDY_3574 7db619436cc0d6bd65e97e46e4f5de58 815 PANTHER PTHR11468:SF3 13 815 0.0 T 21-04-2016 SDY_0250 99472ffcb58487c5aaf42e057c101ab1 246 Gene3D G3DSA:2.40.440.10 43 159 4.9E-5 T 21-04-2016 SDY_0250 99472ffcb58487c5aaf42e057c101ab1 246 SUPERFAMILY SSF141523 42 159 1.83E-10 T 21-04-2016 SDY_0250 99472ffcb58487c5aaf42e057c101ab1 246 PANTHER PTHR36699 6 246 1.2E-77 T 21-04-2016 SDY_0250 99472ffcb58487c5aaf42e057c101ab1 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 2.5E-6 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 21-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 Gene3D G3DSA:3.40.309.10 259 436 7.8E-61 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 SUPERFAMILY SSF53720 2 473 6.81E-155 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 Gene3D G3DSA:3.40.605.10 2 258 4.2E-94 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 PANTHER PTHR11699 1 474 0.0 T 21-04-2016 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 88.492 T 21-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 8.9E-164 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_1730 a83011caaec1bd723ab58845f09a37a2 474 PANTHER PTHR11699:SF109 1 474 0.0 T 21-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 SDY_0528 e9b407cd402ef39d77772a144291a64a 137 PANTHER PTHR12418:SF34 1 131 5.0E-100 T 21-04-2016 SDY_0528 e9b407cd402ef39d77772a144291a64a 137 SUPERFAMILY SSF54637 1 136 2.86E-31 T 21-04-2016 IPR029069 HotDog domain SDY_0528 e9b407cd402ef39d77772a144291a64a 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.3E-47 T 21-04-2016 IPR003736 Phenylacetic acid degradation-related domain SDY_0528 e9b407cd402ef39d77772a144291a64a 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 53.774 T 21-04-2016 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 UniPathway: UPA00017 SDY_0528 e9b407cd402ef39d77772a144291a64a 137 Pfam PF03061 Thioesterase superfamily 50 127 7.0E-17 T 21-04-2016 IPR006683 Thioesterase domain SDY_0528 e9b407cd402ef39d77772a144291a64a 137 Gene3D G3DSA:3.10.129.10 1 136 1.7E-49 T 21-04-2016 IPR029069 HotDog domain SDY_0528 e9b407cd402ef39d77772a144291a64a 137 PANTHER PTHR12418 1 131 5.0E-100 T 21-04-2016 SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.4E-26 T 21-04-2016 IPR003849 Preprotein translocase YajC SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 3.0E-35 T 21-04-2016 IPR003849 Preprotein translocase YajC SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 PANTHER PTHR33909 1 108 2.6E-37 T 21-04-2016 SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 SMART SM01323 19 102 4.0E-37 T 21-04-2016 IPR003849 Preprotein translocase YajC SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 21-04-2016 IPR003849 Preprotein translocase YajC SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 21-04-2016 IPR003849 Preprotein translocase YajC SDY_0327 71affcd52404a53dba2f3b6f1bfef285 110 PANTHER PTHR33909:SF1 1 108 2.6E-37 T 21-04-2016 SDY_1174a 9242a0e7b41ec0b1d69dd6a484d12592 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1174a 9242a0e7b41ec0b1d69dd6a484d12592 90 PANTHER PTHR33293 1 89 1.3E-17 T 21-04-2016 SDY_1174a 9242a0e7b41ec0b1d69dd6a484d12592 90 PANTHER PTHR33293:SF2 1 89 1.3E-17 T 21-04-2016 SDY_1174a 9242a0e7b41ec0b1d69dd6a484d12592 90 Pfam PF03811 InsA N-terminal domain 1 35 2.2E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 5.1E-126 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 3.8E-29 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 3.8E-29 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 3.8E-29 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 3.8E-29 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 3.8E-29 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 39.029 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PANTHER PTHR11706:SF42 7 412 5.2E-258 T 21-04-2016 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 PANTHER PTHR11706 7 412 5.2E-258 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_2588 c263f9f1c20bfed52c1c8a4d1096839b 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 2.7E-98 T 21-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SDY_3477 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P SDY_3477 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 21-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3477 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_3477 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 21-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SDY_3477 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-32 T 21-04-2016 IPR021131 Ribosomal protein L18e/L15P SDY_3477 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 32 143 3.8E-27 T 21-04-2016 SDY_3477 389919749e70ffc67e9bf46e53468622 144 PANTHER PTHR12934 1 144 2.0E-74 T 21-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 2.3E-17 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 Gene3D G3DSA:2.40.50.100 61 94 2.6E-13 T 21-04-2016 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 Gene3D G3DSA:2.40.50.100 183 214 2.6E-13 T 21-04-2016 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 315 3.9E-46 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 PANTHER PTHR30572:SF10 1 319 7.8E-233 T 21-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 PANTHER PTHR30572 1 319 7.8E-233 T 21-04-2016 SDY_2383 367b7b6436b86b0da36ee6a8cde39763 349 SUPERFAMILY SSF111369 52 299 4.32E-28 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.6E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 Gene3D G3DSA:3.40.190.10 198 267 1.7E-7 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 Pfam PF03466 LysR substrate binding domain 98 296 1.7E-31 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 PANTHER PTHR30419:SF7 2 311 2.7E-173 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 Gene3D G3DSA:1.10.10.10 8 93 1.7E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 SUPERFAMILY SSF53850 99 298 1.03E-29 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.9E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 PANTHER PTHR30419 2 311 2.7E-173 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 Gene3D G3DSA:3.40.190.10 99 197 3.9E-20 T 21-04-2016 SDY_3310 1a6ccd40122dc3fb213c88d147319706 312 SUPERFAMILY SSF46785 8 112 8.08E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0839a 853b91af26b0ad9bd228229306782cb0 90 Pfam PF12759 InsA C-terminal domain 42 87 1.7E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0839a 853b91af26b0ad9bd228229306782cb0 90 PANTHER PTHR33293:SF2 1 89 1.1E-19 T 21-04-2016 SDY_0839a 853b91af26b0ad9bd228229306782cb0 90 PANTHER PTHR33293 1 89 1.1E-19 T 21-04-2016 SDY_0839a 853b91af26b0ad9bd228229306782cb0 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3395 d36683810699cc89a3967cd4268feb21 375 Pfam PF06250 Protein of unknown function (DUF1016) 19 361 7.9E-111 T 21-04-2016 IPR009362 Protein of unknown function DUF1016 SDY_3395 d36683810699cc89a3967cd4268feb21 375 PANTHER PTHR30547 139 374 2.2E-187 T 21-04-2016 SDY_3395 d36683810699cc89a3967cd4268feb21 375 PANTHER PTHR30547 1 109 2.2E-187 T 21-04-2016 SDY_3395 d36683810699cc89a3967cd4268feb21 375 PANTHER PTHR30547:SF5 139 374 2.2E-187 T 21-04-2016 SDY_3395 d36683810699cc89a3967cd4268feb21 375 PANTHER PTHR30547:SF5 1 109 2.2E-187 T 21-04-2016 SDY_1539 adbfd5a0a830e8e8eded6a5da0ef8dcc 288 PANTHER PTHR30562 1 280 2.2E-191 T 21-04-2016 SDY_1539 adbfd5a0a830e8e8eded6a5da0ef8dcc 288 PANTHER PTHR30562:SF10 1 280 2.2E-191 T 21-04-2016 SDY_1539 adbfd5a0a830e8e8eded6a5da0ef8dcc 288 SMART SM00465 34 112 5.4E-16 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_1539 adbfd5a0a830e8e8eded6a5da0ef8dcc 288 SUPERFAMILY SSF82771 34 111 5.49E-11 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 Gene3D G3DSA:3.40.640.10 72 319 1.1E-24 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 42 446 7.0E-199 T 21-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 PANTHER PTHR11999 44 459 2.9E-199 T 21-04-2016 SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 SUPERFAMILY SSF53383 39 449 2.9E-127 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 46 381 9.8E-112 T 21-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 267 288 - T 21-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 SDY_3532 aa5773d5eee1cf5ac24226bb57de9a81 464 PANTHER PTHR11999:SF94 44 459 2.9E-199 T 21-04-2016 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 SUPERFAMILY SSF102114 16 117 2.35E-6 T 21-04-2016 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 PIRSF PIRSF000368 1 154 2.3E-61 T 21-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SDY_4256 f0d1233ca95f743a927fe329d7424072 154 Gene3D G3DSA:3.20.20.70 22 129 8.8E-8 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 PANTHER PTHR30352 1 154 1.9E-75 T 21-04-2016 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 7.8E-53 T 21-04-2016 SDY_4256 f0d1233ca95f743a927fe329d7424072 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.9E-66 T 21-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SDY_4256 f0d1233ca95f743a927fe329d7424072 154 PANTHER PTHR30352:SF2 1 154 1.9E-75 T 21-04-2016 SDY_1614 bc5ce17a1d17ac5d38c797a29458f77c 511 PANTHER PTHR11785 21 510 4.3E-222 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1614 bc5ce17a1d17ac5d38c797a29458f77c 511 Pfam PF13520 Amino acid permease 13 450 4.8E-55 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1614 bc5ce17a1d17ac5d38c797a29458f77c 511 PANTHER PTHR11785:SF216 21 510 4.3E-222 T 21-04-2016 SDY_1614 bc5ce17a1d17ac5d38c797a29458f77c 511 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 1 511 0.0 T 21-04-2016 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 SDY_1614 bc5ce17a1d17ac5d38c797a29458f77c 511 PIRSF PIRSF006060 6 483 2.2E-66 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 SUPERFAMILY SSF143548 16 158 4.71E-45 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 PANTHER PTHR30182 2 454 0.0 T 21-04-2016 SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 Gene3D G3DSA:3.30.1330.90 10 158 5.7E-54 T 21-04-2016 IPR029009 Allosteric substrate binding domain SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-230 T 21-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 Pfam PF03313 Serine dehydratase alpha chain 186 448 9.5E-96 T 21-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 PANTHER PTHR30182:SF4 2 454 0.0 T 21-04-2016 SDY_1720 ff100fccd00db7803ad8759d4ff3435c 454 Pfam PF03315 Serine dehydratase beta chain 3 155 2.8E-55 T 21-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SDY_0510a 8f44c03b43dd87ca08a61381da0be296 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.9E-10 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0510a 8f44c03b43dd87ca08a61381da0be296 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.9E-10 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0510a 8f44c03b43dd87ca08a61381da0be296 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 6.0E-20 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0510a 8f44c03b43dd87ca08a61381da0be296 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 21-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 SDY_0510a 8f44c03b43dd87ca08a61381da0be296 50 Pfam PF01848 Hok/gef family 5 46 4.3E-16 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PIRSF PIRSF001415 7 334 1.7E-150 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 21-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 Pfam PF00490 Delta-aminolevulinic acid dehydratase 17 330 2.0E-136 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PANTHER PTHR11458:SF1 7 330 3.0E-282 T 21-04-2016 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PANTHER PTHR11458 7 330 3.0E-282 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 Gene3D G3DSA:3.20.20.70 10 330 1.1E-139 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 132 146 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 1.5E-54 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 SMART SM01004 14 332 1.2E-211 T 21-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_0501 0ac737ae0ea0096abb59b7035141cdbb 335 SUPERFAMILY SSF51569 15 330 1.17E-129 T 21-04-2016 SDY_0756 c46426c216e7cf06b47dab106a168a78 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 4.7E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0756 c46426c216e7cf06b47dab106a168a78 306 Gene3D G3DSA:1.10.3720.10 88 301 3.5E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0756 c46426c216e7cf06b47dab106a168a78 306 SUPERFAMILY SSF161098 91 288 3.79E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0756 c46426c216e7cf06b47dab106a168a78 306 PANTHER PTHR30465:SF59 1 305 3.6E-208 T 21-04-2016 SDY_0756 c46426c216e7cf06b47dab106a168a78 306 PANTHER PTHR30465 1 305 3.6E-208 T 21-04-2016 SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Pfam PF00005 ABC transporter 27 176 7.2E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Gene3D G3DSA:3.40.50.300 14 240 1.1E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 PANTHER PTHR24220:SF266 13 260 1.7E-141 T 21-04-2016 SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SUPERFAMILY SSF52540 13 238 3.15E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 PANTHER PTHR24220 13 260 1.7E-141 T 21-04-2016 SDY_0167 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SMART SM00382 36 224 4.0E-16 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PANTHER PTHR23429:SF0 1 489 1.2E-229 T 21-04-2016 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF51735 4 189 4.53E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PANTHER PTHR23429 1 489 1.2E-229 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.6E-57 T 21-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 6.9E-206 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PIRSF PIRSF000110 1 491 7.0E-180 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF55347 176 488 4.25E-113 T 21-04-2016 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 21-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 8.6E-47 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 8.6E-47 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 8.6E-47 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 8.6E-47 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 8.6E-47 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 4.9E-116 T 21-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.30.360.10 186 487 6.2E-122 T 21-04-2016 SDY_1138 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.40.50.720 7 185 2.1E-59 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1138 2adc85c04e205bb322f6838caacfc474 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.991 T 21-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993 351 558 1.3E-217 T 21-04-2016 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993 1 116 1.3E-217 T 21-04-2016 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993 186 255 1.3E-217 T 21-04-2016 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 SUPERFAMILY SSF56762 1 552 3.4E-169 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 21-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 21-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 6.5E-210 T 21-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 Gene3D G3DSA:1.10.645.10 1 552 1.5E-210 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993:SF26 351 558 1.3E-217 T 21-04-2016 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993:SF26 1 116 1.3E-217 T 21-04-2016 SDY_3079 ec7e02563e43cafe2cedf6657b4ab54e 567 PANTHER PTHR11993:SF26 186 255 1.3E-217 T 21-04-2016 SDY_4047 1f2b54e5f69936e0238cb87a42071aa5 277 Pfam PF04748 Divergent polysaccharide deacetylase 2 196 2.7E-67 T 21-04-2016 IPR006837 Protein of unknown function DUF610, YibQ SDY_4047 1f2b54e5f69936e0238cb87a42071aa5 277 PANTHER PTHR30105 1 213 8.3E-92 T 21-04-2016 SDY_4047 1f2b54e5f69936e0238cb87a42071aa5 277 SUPERFAMILY SSF88713 2 196 1.45E-63 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SDY_4047 1f2b54e5f69936e0238cb87a42071aa5 277 Gene3D G3DSA:3.20.20.370 1 206 4.8E-96 T 21-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PRINTS PR01401 Mutator MutT protein signature 2 23 3.6E-16 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PRINTS PR01401 Mutator MutT protein signature 77 90 3.6E-16 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 SUPERFAMILY SSF55811 1 127 6.63E-34 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 128 4.8E-69 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-8 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-8 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PANTHER PTHR22769 1 126 3.6E-80 T 21-04-2016 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 Gene3D G3DSA:3.90.79.10 3 126 4.2E-34 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 PANTHER PTHR22769:SF36 1 126 3.6E-80 T 21-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 SDY_0129 46c651eb97104175cc3f88283a926ef3 132 Pfam PF00293 NUDIX domain 5 125 6.2E-21 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 2.0E-33 T 21-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 PIRSF PIRSF000159 1 1174 0.0 T 21-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 349 7.2E-16 T 21-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 5.9E-82 T 21-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.1E-9 T 21-04-2016 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:3.30.70.20 672 783 6.6E-21 T 21-04-2016 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:3.40.920.10 418 619 1.4E-77 T 21-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 21-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:3.40.50.970 796 1166 3.3E-127 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.6E-8 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Pfam PF10371 Domain of unknown function 626 678 5.1E-23 T 21-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SMART SM00890 622 679 6.9E-29 T 21-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SUPERFAMILY SSF53323 419 668 9.81E-76 T 21-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SUPERFAMILY SSF52518 794 1166 2.73E-118 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SUPERFAMILY SSF52518 2 254 2.0E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:3.40.50.920 255 413 3.8E-63 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SUPERFAMILY SSF54862 665 838 6.7E-23 T 21-04-2016 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:4.10.780.10 628 668 9.8E-21 T 21-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 SUPERFAMILY SSF52922 256 411 1.86E-43 T 21-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 PANTHER PTHR32154:SF0 1 1174 0.0 T 21-04-2016 SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 Gene3D G3DSA:3.40.50.970 1 254 3.4E-111 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_1461 dea661bda550bc4b97847e8f1c17d247 1174 PANTHER PTHR32154 1 1174 0.0 T 21-04-2016 SDY_2130 25039a1482469b5f2e4756711abe51d9 332 PANTHER PTHR30036 4 332 8.7E-152 T 21-04-2016 SDY_2130 25039a1482469b5f2e4756711abe51d9 332 PANTHER PTHR30036:SF2 4 332 8.7E-152 T 21-04-2016 SDY_2130 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 25 169 3.1E-40 T 21-04-2016 SDY_2130 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 170 315 1.7E-40 T 21-04-2016 SDY_2130 25039a1482469b5f2e4756711abe51d9 332 SUPERFAMILY SSF53822 25 330 2.94E-84 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_2130 25039a1482469b5f2e4756711abe51d9 332 Pfam PF13407 Periplasmic binding protein domain 28 299 9.8E-64 T 21-04-2016 IPR025997 Periplasmic binding protein SDY_0555 f6fd179c11962500676fc59e6506ff74 362 Pfam PF05036 Sporulation related domain 287 359 1.5E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 Pfam PF03330 Lytic transglycolase 79 166 7.6E-20 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SDY_0555 f6fd179c11962500676fc59e6506ff74 362 PANTHER PTHR34183 284 362 3.0E-136 T 21-04-2016 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 PANTHER PTHR34183 4 230 3.0E-136 T 21-04-2016 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 SUPERFAMILY SSF110997 287 357 9.02E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 Gene3D G3DSA:3.30.70.1070 284 359 1.1E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 SUPERFAMILY SSF50685 80 160 3.56E-6 T 21-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SDY_0555 f6fd179c11962500676fc59e6506ff74 362 PANTHER PTHR34183:SF1 284 362 3.0E-136 T 21-04-2016 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 PANTHER PTHR34183:SF1 4 230 3.0E-136 T 21-04-2016 SDY_0555 f6fd179c11962500676fc59e6506ff74 362 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 180 1.4E-28 T 21-04-2016 IPR012997 Rare lipoprotein A SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 PANTHER PTHR30591 1 1105 0.0 T 21-04-2016 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 SUPERFAMILY SSF52540 359 813 4.78E-109 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 PIRSF PIRSF000980 1 1122 0.0 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 SUPERFAMILY SSF52980 820 1120 2.84E-98 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 21-04-2016 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 SUPERFAMILY SSF52540 1 347 7.96E-130 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 Gene3D G3DSA:1.10.10.160 86 183 2.5E-33 T 21-04-2016 IPR013986 DExx box DNA helicase domain SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 PANTHER PTHR30591:SF1 1 1105 0.0 T 21-04-2016 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1122 13.66 T 21-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 Gene3D G3DSA:3.40.50.300 657 752 6.7E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3039 ba7fb5db582cbf7c6a62438c1e36f70f 1122 Gene3D G3DSA:3.40.50.300 342 455 6.7E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 Pfam PF00814 Glycoprotease family 24 307 6.9E-103 T 21-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.609 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PANTHER PTHR11735 1 336 2.2E-171 T 21-04-2016 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.2E-130 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 Gene3D G3DSA:3.30.420.40 1 159 1.4E-50 T 21-04-2016 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-53 T 21-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 PANTHER PTHR11735:SF6 1 336 2.2E-171 T 21-04-2016 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 21-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.2E-136 T 21-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SDY_3248 66e6ffda6e7d19a19beada717e5ad830 337 SUPERFAMILY SSF53067 1 309 2.07E-44 T 21-04-2016 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 PANTHER PTHR30024:SF17 9 320 1.5E-115 T 21-04-2016 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 Gene3D G3DSA:3.40.190.10 106 227 1.6E-22 T 21-04-2016 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 SUPERFAMILY SSF53850 34 307 1.4E-46 T 21-04-2016 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 SMART SM00062 24 239 2.3E-30 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 247 6.4E-27 T 21-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 Gene3D G3DSA:3.40.190.10 22 98 9.0E-4 T 21-04-2016 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 1.7E-159 T 21-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 SDY_0505 c0ff2506eb4a0a00c13589e664debd98 320 PANTHER PTHR30024 9 320 1.5E-115 T 21-04-2016 SDY_4696 76fe250efac3497e450359fbfb1b4566 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4696 76fe250efac3497e450359fbfb1b4566 90 PANTHER PTHR33293 1 89 4.4E-21 T 21-04-2016 SDY_4696 76fe250efac3497e450359fbfb1b4566 90 Pfam PF03811 InsA N-terminal domain 1 35 9.8E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2389 25324ef19b0d9c6487b81bbb740835cd 299 PANTHER PTHR35804:SF1 2 298 4.1E-100 T 21-04-2016 SDY_2389 25324ef19b0d9c6487b81bbb740835cd 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 9.0E-69 T 21-04-2016 IPR005642 Lysine exporter LysO SDY_2389 25324ef19b0d9c6487b81bbb740835cd 299 PANTHER PTHR35804 2 298 4.1E-100 T 21-04-2016 SDY_2389 25324ef19b0d9c6487b81bbb740835cd 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 7.4E-58 T 21-04-2016 IPR005642 Lysine exporter LysO SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 SUPERFAMILY SSF88697 251 310 1.94E-14 T 21-04-2016 IPR015947 PUA-like domain SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 5.5E-57 T 21-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.4E-19 T 21-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 SUPERFAMILY SSF55120 10 246 1.18E-85 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 Gene3D G3DSA:2.30.130.10 250 312 5.0E-29 T 21-04-2016 IPR015947 PUA-like domain SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.921 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 4.2E-22 T 21-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 1.2E-95 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 PANTHER PTHR13767 2 309 8.6E-135 T 21-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3345 14fa71101279094ef0e45aa8cc35713f 314 PANTHER PTHR13767:SF2 2 309 8.6E-135 T 21-04-2016 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 Gene3D G3DSA:1.20.1250.20 46 225 6.2E-28 T 21-04-2016 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 PANTHER PTHR23511 30 455 3.0E-304 T 21-04-2016 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 Pfam PF00083 Sugar (and other) transporter 53 453 4.9E-50 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 PANTHER PTHR23511:SF10 30 455 3.0E-304 T 21-04-2016 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 Gene3D G3DSA:1.20.1250.20 270 449 4.1E-15 T 21-04-2016 SDY_2973 b882ff2755c298994ce820ca9bec819d 469 SUPERFAMILY SSF103473 32 452 1.96E-68 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2791 e42d60a689b34287f55106a75659e7eb 96 SUPERFAMILY SSF54285 4 79 6.28E-26 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SDY_2791 e42d60a689b34287f55106a75659e7eb 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.412 T 21-04-2016 IPR005346 RnfH protein SDY_2791 e42d60a689b34287f55106a75659e7eb 96 PANTHER PTHR37483 2 95 4.0E-42 T 21-04-2016 SDY_2791 e42d60a689b34287f55106a75659e7eb 96 Gene3D G3DSA:3.10.20.280 4 89 1.0E-36 T 21-04-2016 IPR005346 RnfH protein SDY_2791 e42d60a689b34287f55106a75659e7eb 96 Pfam PF03658 RnfH family Ubiquitin 5 87 1.7E-33 T 21-04-2016 IPR005346 RnfH protein SDY_2791 e42d60a689b34287f55106a75659e7eb 96 PANTHER PTHR37483:SF1 2 95 4.0E-42 T 21-04-2016 SDY_3511 04826ee02de2e8ea82315341ca3f5b4e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 6.1E-32 T 21-04-2016 IPR012658 Conserved hypothetical protein CHP02443 SDY_3511 04826ee02de2e8ea82315341ca3f5b4e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 54 2.5E-18 T 21-04-2016 IPR012658 Conserved hypothetical protein CHP02443 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50156 225 350 3.68E-24 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 443 2.1E-12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PANTHER PTHR22939:SF101 1 455 9.3E-220 T 21-04-2016 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Pfam PF13180 PDZ domain 285 358 1.0E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.40.10.10 39 154 1.9E-34 T 21-04-2016 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 8.6E-30 T 21-04-2016 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50494 39 262 6.15E-63 T 21-04-2016 IPR009003 Peptidase S1, PA clan SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.30.42.10 269 364 5.8E-30 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.30.42.10 387 452 3.6E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.0E-59 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50156 386 452 1.84E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 SMART SM00228 267 349 9.3E-14 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 SMART SM00228 374 447 1.8E-11 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 1.1E-160 T 21-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.40.10.10 156 268 1.6E-43 T 21-04-2016 SDY_3410 43a2e6596dda49ad446202ff041a738e 455 PANTHER PTHR22939 1 455 9.3E-220 T 21-04-2016 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 PANTHER PTHR10937:SF0 1 609 0.0 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 2.4E-21 T 21-04-2016 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Gene3D G3DSA:3.60.20.10 2 238 1.2E-80 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 SUPERFAMILY SSF53697 245 609 1.39E-114 T 21-04-2016 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 PANTHER PTHR10937 1 609 0.0 T 21-04-2016 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Gene3D G3DSA:3.40.50.10490 245 444 3.1E-65 T 21-04-2016 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Pfam PF01380 SIS domain 289 418 2.9E-33 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Pfam PF01380 SIS domain 462 591 1.5E-30 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.568 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 2.1E-270 T 21-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 SUPERFAMILY SSF56235 2 232 1.29E-75 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_4019 6aec3a8b477dd67eb7295801e8a4a53c 609 Gene3D G3DSA:3.40.50.10490 445 609 3.0E-70 T 21-04-2016 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 SUPERFAMILY SSF63411 33 261 2.57E-51 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 9.5E-39 T 21-04-2016 IPR011765 Peptidase M16, N-terminal SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Gene3D G3DSA:3.30.830.10 30 266 2.7E-64 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Gene3D G3DSA:3.30.830.10 274 506 6.0E-64 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Gene3D G3DSA:3.30.830.10 730 959 8.5E-61 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 PANTHER PTHR11851 411 927 0.0 T 21-04-2016 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 PANTHER PTHR11851 1 394 0.0 T 21-04-2016 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Pfam PF05193 Peptidase M16 inactive domain 681 856 1.9E-13 T 21-04-2016 IPR007863 Peptidase M16, C-terminal SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Pfam PF05193 Peptidase M16 inactive domain 216 394 9.3E-22 T 21-04-2016 IPR007863 Peptidase M16, C-terminal SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Gene3D G3DSA:3.30.830.10 507 729 1.1E-65 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 SUPERFAMILY SSF63411 265 502 8.56E-65 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 SUPERFAMILY SSF63411 504 728 1.92E-46 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 PANTHER PTHR11851:SF135 411 927 0.0 T 21-04-2016 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 PANTHER PTHR11851:SF135 1 394 0.0 T 21-04-2016 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 SUPERFAMILY SSF63411 735 957 7.33E-45 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 676 8.8E-53 T 21-04-2016 IPR032632 Peptidase M16, middle/third domain SDY_3038 34fc9106f80cd1bc2a01da6ebb29ec9b 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 21-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 Gene3D G3DSA:3.40.640.10 1 248 2.6E-79 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 PANTHER PTHR30244:SF14 1 376 9.9E-296 T 21-04-2016 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 Gene3D G3DSA:3.90.1150.10 251 375 6.4E-21 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 PANTHER PTHR30244 1 376 9.9E-296 T 21-04-2016 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 PIRSF PIRSF000390 1 376 1.1E-121 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 SUPERFAMILY SSF53383 2 375 1.04E-101 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 3.2E-222 T 21-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 1.2E-85 T 21-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SDY_3957 9cfe8a5f44396905c694973a0f37bc6c 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.53 T 21-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 SDY_0142 a7d092e4f8f5b867479025dc022fdbf2 457 PANTHER PTHR11785 1 449 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0142 a7d092e4f8f5b867479025dc022fdbf2 457 PIRSF PIRSF006060 1 453 1.1E-81 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0142 a7d092e4f8f5b867479025dc022fdbf2 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_0142 a7d092e4f8f5b867479025dc022fdbf2 457 PANTHER PTHR11785:SF26 1 449 0.0 T 21-04-2016 SDY_0142 a7d092e4f8f5b867479025dc022fdbf2 457 Pfam PF00324 Amino acid permease 19 454 7.9E-131 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 9.4E-13 T 21-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 SUPERFAMILY SSF56322 7 515 3.53E-163 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PIRSF PIRSF001373 1 520 4.1E-248 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PANTHER PTHR11236 1 512 7.6E-274 T 21-04-2016 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 5.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 5.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 5.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 5.3E-23 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 PANTHER PTHR11236:SF22 1 512 7.6E-274 T 21-04-2016 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 Pfam PF00425 chorismate binding enzyme 242 502 3.8E-82 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 2.2E-278 T 21-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1332 27fcf745720fc407a917e3ae38c39e93 520 Gene3D G3DSA:3.60.120.10 4 515 1.4E-160 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 SUPERFAMILY SSF116842 3 73 4.45E-23 T 21-04-2016 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Gene3D G3DSA:1.10.287.1040 6 78 8.8E-31 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 1.0E-21 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 17.147 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PANTHER PTHR34137 1 80 2.1E-28 T 21-04-2016 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Pfam PF02609 Exonuclease VII small subunit 11 62 6.4E-22 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-24 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_0308 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PIRSF PIRSF006488 1 80 8.9E-25 T 21-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 SUPERFAMILY SSF55681 108 287 1.7E-106 T 21-04-2016 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 SUPERFAMILY SSF55681 420 584 1.7E-106 T 21-04-2016 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Gene3D G3DSA:2.40.50.140 1 106 6.6E-40 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 SUPERFAMILY SSF55261 288 419 1.77E-46 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.0E-106 T 21-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PANTHER PTHR22594 370 571 4.2E-257 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PANTHER PTHR22594 1 296 4.2E-257 T 21-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 3.5E-281 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Pfam PF02938 GAD domain 307 406 8.7E-32 T 21-04-2016 IPR029351 GAD domain SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.3E-17 T 21-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Gene3D G3DSA:3.30.1360.30 276 414 8.2E-48 T 21-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PANTHER PTHR22594:SF5 370 571 4.2E-257 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PANTHER PTHR22594:SF5 1 296 4.2E-257 T 21-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 SUPERFAMILY SSF50249 1 105 1.18E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.172 T 21-04-2016 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Gene3D G3DSA:3.30.930.10 415 585 3.5E-112 T 21-04-2016 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 Gene3D G3DSA:3.30.930.10 131 275 3.5E-112 T 21-04-2016 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1153 f72af07ad78e55625ab7212cbc8c25a3 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 21-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1213 051da8d2246c9cee32265f9311b41746 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 6.0E-8 T 21-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SDY_1213 051da8d2246c9cee32265f9311b41746 148 PANTHER PTHR37421 1 148 2.3E-85 T 21-04-2016 SDY_1213 051da8d2246c9cee32265f9311b41746 148 PANTHER PTHR37421:SF1 1 148 2.3E-85 T 21-04-2016 SDY_1213 051da8d2246c9cee32265f9311b41746 148 PIRSF PIRSF006173 1 145 6.5E-69 T 21-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 SDY_1213 051da8d2246c9cee32265f9311b41746 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 42.89 T 21-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SMART SM00304 310 363 1.6E-5 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SMART SM00388 397 459 1.6E-6 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SMART SM00448 638 749 5.5E-13 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PANTHER PTHR24423:SF544 381 752 9.9E-137 T 21-04-2016 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SUPERFAMILY SSF55874 450 619 1.2E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 Gene3D G3DSA:3.30.565.10 458 616 1.1E-36 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 616 1.6E-19 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 Gene3D G3DSA:3.40.50.2300 638 751 3.2E-26 T 21-04-2016 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SMART SM00387 500 618 1.3E-26 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 7.7E-16 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 596 7.7E-16 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 615 7.7E-16 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 7.7E-16 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SUPERFAMILY SSF158472 316 358 2.48E-7 T 21-04-2016 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 Pfam PF00072 Response regulator receiver domain 640 749 4.5E-10 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SUPERFAMILY SSF47384 393 457 1.0E-6 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 Pfam PF00672 HAMP domain 291 357 4.9E-12 T 21-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 SUPERFAMILY SSF52172 639 752 8.97E-20 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4127 4f1da3f595df2b288db3cc23c7ec826d 754 PANTHER PTHR24423 381 752 9.9E-137 T 21-04-2016 SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 Gene3D G3DSA:3.40.50.1820 7 251 1.3E-54 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 SUPERFAMILY SSF53474 8 250 3.27E-39 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 PANTHER PTHR10992 8 252 2.3E-72 T 21-04-2016 SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 PANTHER PTHR10992:SF698 8 252 2.3E-72 T 21-04-2016 SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 1.6E-19 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 1.2E-80 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2459 0f4477c004b0c9999fa2ecb79c667826 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 251 34.111 T 21-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 PIRSF PIRSF005784 3 191 4.5E-84 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 PANTHER PTHR11938:SF64 1 189 8.3E-97 T 21-04-2016 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 PANTHER PTHR11938 1 189 8.3E-97 T 21-04-2016 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.3E-16 T 21-04-2016 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.4E-12 T 21-04-2016 IPR007202 4Fe-4S domain GO:0051536 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 Gene3D G3DSA:3.30.70.20 111 177 7.2E-17 T 21-04-2016 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 4.5E-88 T 21-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 SUPERFAMILY SSF54862 38 174 6.58E-29 T 21-04-2016 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.157 T 21-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 SDY_1851 8508bf098ebf52a71fa50ae789992763 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1851 8508bf098ebf52a71fa50ae789992763 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 4.4E-63 T 21-04-2016 SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 PANTHER PTHR18895 11 192 1.5E-55 T 21-04-2016 SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 1.2E-79 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 Gene3D G3DSA:3.40.50.150 5 194 7.9E-70 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 SUPERFAMILY SSF53335 11 189 8.73E-53 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 PIRSF PIRSF004553 11 191 2.1E-62 T 21-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_3616 eb77732f12005085a3f1b2b0501d6466 198 PANTHER PTHR18895:SF60 11 192 1.5E-55 T 21-04-2016 SDY_1552 6777a576efd8faf3fa3c5d9260bfec9b 344 PANTHER PTHR21716 1 344 1.2E-238 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_1552 6777a576efd8faf3fa3c5d9260bfec9b 344 Pfam PF01594 Domain of unknown function DUF20 14 328 5.7E-76 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_1552 6777a576efd8faf3fa3c5d9260bfec9b 344 PANTHER PTHR21716:SF18 1 344 1.2E-238 T 21-04-2016 SDY_0391 7d104883357b9230edf977437661a155 129 Gene3D G3DSA:1.10.10.10 31 115 3.8E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0391 7d104883357b9230edf977437661a155 129 PANTHER PTHR10815 15 128 2.1E-57 T 21-04-2016 SDY_0391 7d104883357b9230edf977437661a155 129 SUPERFAMILY SSF46767 31 113 2.62E-26 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_0391 7d104883357b9230edf977437661a155 129 PANTHER PTHR10815:SF2 15 128 2.1E-57 T 21-04-2016 SDY_0391 7d104883357b9230edf977437661a155 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 112 4.0E-26 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_0391 7d104883357b9230edf977437661a155 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 32 102 7.1E-15 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PANTHER PTHR30511 1 359 4.2E-248 T 21-04-2016 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 1.0E-35 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 Hamap MF_01201 Alanine racemase. 1 358 34.513 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PANTHER PTHR30511:SF4 1 359 4.2E-248 T 21-04-2016 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.2E-70 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 Gene3D G3DSA:2.40.37.10 213 359 3.6E-53 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 SUPERFAMILY SSF51419 8 235 8.87E-69 T 21-04-2016 IPR029066 PLP-binding barrel SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 SUPERFAMILY SSF50621 228 358 6.98E-43 T 21-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 Gene3D G3DSA:3.20.20.10 11 212 1.5E-75 T 21-04-2016 IPR029066 PLP-binding barrel SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 250 265 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 120 132 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 60 78 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 288 305 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 155 166 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 267 282 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 26 42 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 192 219 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 PRINTS PR00992 Alanine racemase signature 340 353 2.1E-76 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 SMART SM01005 234 358 5.3E-60 T 21-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 21-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_4521 d4eae20c5767ebdf4fb7d1d2cba56e79 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.9E-150 T 21-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_0819a dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_0819a dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0819a dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0819a dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_4706 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_4706 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4706 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4706 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_4718 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_4718 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4718 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4718 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_4722 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_4722 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4722 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4722 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_4689 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_4689 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4689 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4689 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_4716 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293 1 89 8.3E-20 T 21-04-2016 SDY_4716 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4716 dbf0aec942f84ab2daa8c466a03c8bb8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4716 dbf0aec942f84ab2daa8c466a03c8bb8 90 PANTHER PTHR33293:SF2 1 89 8.3E-20 T 21-04-2016 SDY_1046 d436e9f184c89e357607610b025a7c11 156 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 2.0E-38 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 SDY_1046 d436e9f184c89e357607610b025a7c11 156 PIRSF PIRSF018267 1 150 5.6E-51 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 SDY_1046 d436e9f184c89e357607610b025a7c11 156 Gene3D G3DSA:3.40.960.10 21 154 5.7E-50 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 SDY_1046 d436e9f184c89e357607610b025a7c11 156 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 8.8E-54 T 21-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 SDY_1046 d436e9f184c89e357607610b025a7c11 156 SUPERFAMILY SSF52980 2 153 8.04E-54 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 PANTHER PTHR10108 18 198 1.9E-49 T 21-04-2016 SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 SUPERFAMILY SSF53335 4 250 3.32E-56 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 PANTHER PTHR10108:SF886 18 198 1.9E-49 T 21-04-2016 SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 Pfam PF13847 Methyltransferase domain 84 196 1.3E-15 T 21-04-2016 IPR025714 Methyltransferase domain SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 PIRSF PIRSF018249 1 268 2.9E-94 T 21-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 SDY_1968 ef043d767ee531f86c186a863bf7fcef 269 Gene3D G3DSA:3.40.50.150 70 213 3.3E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3776 7fb07d5435d3baed58ff009fa1fc946e 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.6E-106 T 21-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SDY_3776 7fb07d5435d3baed58ff009fa1fc946e 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 3.6E-108 T 21-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SDY_3776 7fb07d5435d3baed58ff009fa1fc946e 296 SUPERFAMILY SSF51730 22 294 2.16E-97 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like SDY_3776 7fb07d5435d3baed58ff009fa1fc946e 296 PANTHER PTHR21091 149 280 1.9E-44 T 21-04-2016 SDY_3776 7fb07d5435d3baed58ff009fa1fc946e 296 Gene3D G3DSA:3.20.20.220 13 293 1.1E-108 T 21-04-2016 IPR029041 FAD-linked oxidoreductase-like SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 PANTHER PTHR34406:SF1 1 182 8.4E-64 T 21-04-2016 SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 Hamap MF_00780 Protein YceI [yceI]. 1 191 46.076 T 21-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 Gene3D G3DSA:2.40.128.110 22 184 5.0E-61 T 21-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 PANTHER PTHR34406 1 182 8.4E-64 T 21-04-2016 SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 SUPERFAMILY SSF101874 22 182 3.92E-56 T 21-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 Pfam PF04264 YceI-like domain 25 183 3.1E-43 T 21-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SDY_2311 3cd0b2a6287fdf4360f8414d88195da3 195 SMART SM00867 24 188 6.2E-69 T 21-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SDY_2258 197afe5039f4045807d22cc1e8833b91 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 84 5.7E-12 T 21-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SDY_0080 1701af2fd299773270f7ff290d954757 271 Pfam PF05099 Tellurite resistance protein TerB 47 170 4.9E-10 T 21-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SDY_0080 1701af2fd299773270f7ff290d954757 271 Pfam PF00226 DnaJ domain 208 267 7.1E-11 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 271 40.11 T 21-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 SDY_0080 1701af2fd299773270f7ff290d954757 271 SMART SM00271 204 269 5.2E-17 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 SUPERFAMILY SSF46565 131 267 4.29E-31 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 Gene3D G3DSA:1.10.3680.10 22 208 3.5E-27 T 21-04-2016 IPR029024 TerB-like SDY_0080 1701af2fd299773270f7ff290d954757 271 PRINTS PR00625 DnaJ domain signature 225 240 1.7E-7 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 PRINTS PR00625 DnaJ domain signature 249 269 1.7E-7 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 PRINTS PR00625 DnaJ domain signature 207 225 1.7E-7 T 21-04-2016 IPR001623 DnaJ domain SDY_0080 1701af2fd299773270f7ff290d954757 271 Gene3D G3DSA:1.10.287.110 209 267 2.7E-14 T 21-04-2016 IPR001623 DnaJ domain SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 SUPERFAMILY SSF56176 18 282 4.53E-54 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Gene3D G3DSA:3.30.43.10 2 109 7.1E-31 T 21-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 SUPERFAMILY SSF46548 655 691 3.31E-8 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 SUPERFAMILY SSF46548 519 622 3.31E-8 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 2.0E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 PANTHER PTHR11748 247 587 1.3E-192 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 PANTHER PTHR11748 18 196 1.3E-192 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 4.1E-66 T 21-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Gene3D G3DSA:3.30.465.10 110 282 4.7E-42 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 PANTHER PTHR11748:SF35 247 587 1.3E-192 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 PANTHER PTHR11748:SF35 18 196 1.3E-192 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Gene3D G3DSA:1.10.1060.10 656 695 3.8E-14 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Gene3D G3DSA:1.10.1060.10 516 619 3.8E-14 T 21-04-2016 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 SUPERFAMILY SSF55103 258 542 2.94E-54 T 21-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SDY_1675 5a7ab952d076ae97c39add3e64fdf499 1018 Pfam PF01565 FAD binding domain 52 192 1.1E-37 T 21-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 SUPERFAMILY SSF50249 4 69 1.93E-14 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 Gene3D G3DSA:2.40.50.140 5 69 5.0E-15 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 21-04-2016 IPR019844 Cold-shock conserved site SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 PANTHER PTHR11544 1 67 5.6E-18 T 21-04-2016 SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 SMART SM00357 6 70 5.3E-17 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.2E-22 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_0964 ab52a56d701f4b8ec4f64047f13642de 70 PIRSF PIRSF002599 1 70 5.7E-13 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 PANTHER PTHR30544 7 382 6.6E-214 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 Pfam PF04055 Radical SAM superfamily 120 289 2.9E-18 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 364 75.927 T 21-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 PANTHER PTHR30544:SF5 7 382 6.6E-214 T 21-04-2016 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 PIRSF PIRSF006004 11 378 3.2E-149 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 SUPERFAMILY SSF102114 116 326 4.84E-16 T 21-04-2016 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 369 2.4E-179 T 21-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SDY_2713 1b191014a633b5c1771193980a66d6a7 384 Gene3D G3DSA:3.20.20.70 117 322 9.4E-18 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0252 249e0c9832a5f3711b69a22e084a9119 86 PIRSF PIRSF003108 1 86 3.6E-35 T 21-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 SDY_0252 249e0c9832a5f3711b69a22e084a9119 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 2.3E-24 T 21-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SDY_0252 249e0c9832a5f3711b69a22e084a9119 86 Pfam PF04221 RelB antitoxin 4 83 3.3E-31 T 21-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SDY_0252 249e0c9832a5f3711b69a22e084a9119 86 PANTHER PTHR38781 2 86 4.3E-27 T 21-04-2016 SDY_0252 249e0c9832a5f3711b69a22e084a9119 86 PANTHER PTHR38781:SF1 2 86 4.3E-27 T 21-04-2016 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 Gene3D G3DSA:1.10.10.60 128 176 2.9E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 Gene3D G3DSA:1.10.10.60 177 227 7.0E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 Pfam PF12833 Helix-turn-helix domain 146 225 3.5E-17 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 SUPERFAMILY SSF46689 177 226 1.25E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 PANTHER PTHR11019:SF130 46 231 2.2E-86 T 21-04-2016 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 SMART SM00342 140 223 3.5E-17 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3705 ba58998d613f96f125518ef1af2fb960 233 PANTHER PTHR11019 46 231 2.2E-86 T 21-04-2016 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 227 5.8E-30 T 21-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 Gene3D G3DSA:2.160.20.70 114 230 5.2E-37 T 21-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 SUPERFAMILY SSF63848 125 230 3.53E-29 T 21-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 PANTHER PTHR34108 3 231 3.5E-78 T 21-04-2016 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 231 29.141 T 21-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 PANTHER PTHR34108:SF1 3 231 3.5E-78 T 21-04-2016 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 2.1E-40 T 21-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 SDY_1207 2a608b3c2513c56feb3d1e8b26dfc719 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 230 3.7E-71 T 21-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 SMART SM00971 9 113 3.2E-65 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 Gene3D G3DSA:1.10.3130.10 7 142 1.3E-52 T 21-04-2016 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 PANTHER PTHR23416:SF2 5 258 2.2E-160 T 21-04-2016 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 9.1E-40 T 21-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 SUPERFAMILY SSF51161 5 260 1.52E-68 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 PANTHER PTHR23416 5 258 2.2E-160 T 21-04-2016 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.4E-75 T 21-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 21-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SDY_4040 076eda253f1c5c6ad36e80ae7b231049 273 Gene3D G3DSA:2.160.10.10 143 252 6.9E-32 T 21-04-2016 SDY_4278 896d228e4bbe51d3c0c3cae328154073 167 Gene3D G3DSA:3.40.630.30 10 166 6.9E-35 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4278 896d228e4bbe51d3c0c3cae328154073 167 PANTHER PTHR13947:SF7 4 167 2.4E-62 T 21-04-2016 SDY_4278 896d228e4bbe51d3c0c3cae328154073 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 1.0E-13 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_4278 896d228e4bbe51d3c0c3cae328154073 167 SUPERFAMILY SSF55729 10 166 1.89E-31 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4278 896d228e4bbe51d3c0c3cae328154073 167 PANTHER PTHR13947 4 167 2.4E-62 T 21-04-2016 SDY_4592 ff5ce9feaaabd306d3388206174b1f06 163 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 6 60 9.0E-25 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 SUPERFAMILY SSF56024 273 473 1.05E-47 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.205 T 21-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 PANTHER PTHR21248 18 486 6.1E-303 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Gene3D G3DSA:3.30.870.10 317 460 5.2E-35 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 SUPERFAMILY SSF56024 66 315 3.4E-45 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 SMART SM00155 399 426 8.2E-6 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 SMART SM00155 219 246 2.1E-4 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Gene3D G3DSA:3.30.870.10 111 316 3.2E-33 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.2E-6 T 21-04-2016 IPR027379 Cardiolipin synthase N-terminal SDY_1307 4f0873b05e567aca8e940db16719bc98 486 PANTHER PTHR21248:SF9 18 486 6.1E-303 T 21-04-2016 SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Pfam PF13091 PLD-like domain 332 446 3.7E-22 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_1307 4f0873b05e567aca8e940db16719bc98 486 Pfam PF13091 PLD-like domain 134 248 1.5E-11 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_1307 4f0873b05e567aca8e940db16719bc98 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 4.3E-227 T 21-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SDY_0980a 1dcd6d92651c44a7234a28522f3bf66b 57 PANTHER PTHR36569 1 53 5.3E-34 T 21-04-2016 SDY_0980a 1dcd6d92651c44a7234a28522f3bf66b 57 PANTHER PTHR36569:SF4 1 53 5.3E-34 T 21-04-2016 SDY_0980a 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 9.2E-10 T 21-04-2016 IPR019626 Stress-induced protein, KGG, repeat SDY_0980a 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 1.8E-9 T 21-04-2016 IPR019626 Stress-induced protein, KGG, repeat SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 Pfam PF02348 Cytidylyltransferase 4 221 6.0E-73 T 21-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 SUPERFAMILY SSF53448 3 245 4.73E-68 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.495 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 PANTHER PTHR21485:SF4 1 248 5.0E-128 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 PANTHER PTHR21485 1 248 5.0E-128 T 21-04-2016 SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.4E-137 T 21-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SDY_2340 a4a39f6e1373d3b8d887889ee559d62b 248 Gene3D G3DSA:3.90.550.10 1 247 2.4E-86 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 PANTHER PTHR18966 26 253 3.9E-168 T 21-04-2016 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 SUPERFAMILY SSF53850 26 257 3.12E-64 T 21-04-2016 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 PANTHER PTHR18966:SF227 26 253 3.9E-168 T 21-04-2016 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 Gene3D G3DSA:3.40.190.10 26 113 1.3E-43 T 21-04-2016 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 Gene3D G3DSA:3.40.190.10 215 257 1.3E-43 T 21-04-2016 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 9.7E-100 T 21-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 SMART SM00062 27 256 3.1E-77 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 8.3E-62 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2509 2a58100d2c0658bcadae452c5ec2f729 260 Gene3D G3DSA:3.40.190.10 116 213 6.2E-32 T 21-04-2016 SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 SUPERFAMILY SSF161098 96 283 2.35E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.2E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 PANTHER PTHR30465 18 303 1.6E-243 T 21-04-2016 SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 PANTHER PTHR30465:SF57 18 303 1.6E-243 T 21-04-2016 SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 3.6E-15 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SDY_0755 6a2686dadf53d90d8efa181bba84494a 303 Gene3D G3DSA:1.10.3720.10 93 299 1.1E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3833 dfa9e01deeb9b70c1ffa4b789a91d914 166 Pfam PF07813 LTXXQ motif family protein 41 135 7.4E-22 T 21-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SDY_3833 dfa9e01deeb9b70c1ffa4b789a91d914 166 PANTHER PTHR38102:SF2 1 158 2.8E-111 T 21-04-2016 SDY_3833 dfa9e01deeb9b70c1ffa4b789a91d914 166 PANTHER PTHR38102 1 158 2.8E-111 T 21-04-2016 SDY_3833 dfa9e01deeb9b70c1ffa4b789a91d914 166 PIRSF PIRSF034445 2 146 5.5E-31 T 21-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SDY_2639 90ef2ad26ff78bfe673ddffdff45f97e 242 PANTHER PTHR39329 1 242 1.8E-172 T 21-04-2016 SDY_2639 90ef2ad26ff78bfe673ddffdff45f97e 242 Gene3D G3DSA:3.20.20.70 1 242 9.6E-126 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2639 90ef2ad26ff78bfe673ddffdff45f97e 242 PANTHER PTHR39329:SF1 1 242 1.8E-172 T 21-04-2016 SDY_2639 90ef2ad26ff78bfe673ddffdff45f97e 242 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 1 233 1.5E-116 T 21-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 1.4E-41 T 21-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 PANTHER PTHR30218 1 688 0.0 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 SUPERFAMILY SSF143724 107 313 1.43E-59 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 PANTHER PTHR30218:SF0 1 688 0.0 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 3.6E-257 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 SUPERFAMILY SSF56024 320 499 1.48E-56 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.0E-31 T 21-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Gene3D G3DSA:3.30.870.10 502 685 1.2E-66 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 4.1E-143 T 21-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 PIRSF PIRSF015589 1 688 5.2E-240 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 SUPERFAMILY SSF56024 503 684 4.49E-68 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Gene3D G3DSA:3.30.1840.10 106 300 9.2E-52 T 21-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Gene3D G3DSA:3.30.870.10 327 501 1.4E-74 T 21-04-2016 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 SUPERFAMILY SSF140356 3 105 8.11E-34 T 21-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SDY_2690 788100d3be37b379eb02e4da35aa4589 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 683 36.327 T 21-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 Pfam PF00589 Phage integrase family 113 280 1.4E-52 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 Gene3D G3DSA:1.10.443.10 115 287 1.7E-52 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 294 37.015 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 6.5E-27 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 Gene3D G3DSA:1.10.150.130 5 101 2.0E-25 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 296 1.1E-111 T 21-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 PANTHER PTHR30349:SF17 4 296 6.7E-177 T 21-04-2016 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 SUPERFAMILY SSF47823 6 98 1.59E-11 T 21-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 SUPERFAMILY SSF56349 107 292 2.85E-54 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SDY_3934 f3f93b6edc44bbbc52f70d8c3190ba1e 298 PANTHER PTHR30349 4 296 6.7E-177 T 21-04-2016 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Pfam PF02978 Signal peptide binding domain 329 427 6.8E-33 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.89 T 21-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 SUPERFAMILY SSF52540 42 354 1.09E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.4E-23 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 SUPERFAMILY SSF47446 329 431 1.19E-38 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Gene3D G3DSA:1.10.260.30 329 432 5.4E-41 T 21-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 SMART SM00963 1 86 2.4E-37 T 21-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 PANTHER PTHR11564 1 435 1.5E-280 T 21-04-2016 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 PANTHER PTHR11564:SF7 1 435 1.5E-280 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.9E-181 T 21-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Gene3D G3DSA:1.20.120.140 2 89 3.7E-36 T 21-04-2016 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 SMART SM00382 99 247 6.9E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.9E-75 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 SMART SM00962 100 296 8.2E-120 T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 21-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SDY_2784 e0810723a2828fa6c9164bc78582231e 453 Gene3D G3DSA:3.40.50.300 94 297 2.0E-79 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4553 35be4bd95f286d923b53691126a11ea3 872 Pfam PF07238 PilZ domain 694 790 3.3E-12 T 21-04-2016 IPR009875 PilZ domain GO:0035438 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 SUPERFAMILY SSF53448 275 556 1.35E-50 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4553 35be4bd95f286d923b53691126a11ea3 872 Pfam PF00535 Glycosyl transferase family 2 276 446 1.1E-34 T 21-04-2016 IPR001173 Glycosyltransferase 2-like SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PANTHER PTHR10587:SF94 179 718 1.2E-143 T 21-04-2016 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 Gene3D G3DSA:3.90.550.10 273 507 1.1E-21 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4553 35be4bd95f286d923b53691126a11ea3 872 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 830 0.0 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 1.5E-55 T 21-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 SUPERFAMILY SSF141371 695 779 1.04E-7 T 21-04-2016 SDY_4553 35be4bd95f286d923b53691126a11ea3 872 PANTHER PTHR10587 179 718 1.2E-143 T 21-04-2016 SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 7.0E-131 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 PANTHER PTHR12544 7 308 9.0E-167 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 Gene3D G3DSA:3.40.710.10 8 308 1.2E-125 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 SUPERFAMILY SSF56601 7 308 7.45E-115 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 Pfam PF04960 Glutaminase 24 308 4.6E-113 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SDY_1631 1c919ce060ef60495feb4fd2a2e38f22 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.165 T 21-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 PANTHER PTHR11079 3 218 2.6E-81 T 21-04-2016 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 218 4.7E-61 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 SUPERFAMILY SSF55120 8 216 1.34E-63 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 5.4E-30 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_0082 0de6f5d10286a29a72ae672024d23f37 219 PANTHER PTHR11079:SF86 3 218 2.6E-81 T 21-04-2016 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 9.3E-181 T 21-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 SUPERFAMILY SSF53383 74 462 1.65E-50 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4212 21721df5373e2329de7bd36483dc1e60 463 Gene3D G3DSA:3.40.640.10 78 321 2.0E-30 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 2.2E-190 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 PANTHER PTHR32328 2 458 1.1E-261 T 21-04-2016 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.1E-9 T 21-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 PANTHER PTHR32328:SF0 2 458 1.1E-261 T 21-04-2016 SDY_4212 21721df5373e2329de7bd36483dc1e60 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 256.637 T 21-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SDY_2969 9933ad671df28ca9d7cd5d83722172d1 98 SUPERFAMILY SSF54862 44 96 7.18E-9 T 21-04-2016 SDY_2969 9933ad671df28ca9d7cd5d83722172d1 98 Gene3D G3DSA:3.30.70.20 44 81 4.0E-6 T 21-04-2016 SDY_2969 9933ad671df28ca9d7cd5d83722172d1 98 PIRSF PIRSF036548 7 98 2.9E-26 T 21-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 SDY_2969 9933ad671df28ca9d7cd5d83722172d1 98 PANTHER PTHR10617:SF112 26 83 7.5E-17 T 21-04-2016 SDY_2969 9933ad671df28ca9d7cd5d83722172d1 98 PANTHER PTHR10617 26 83 7.5E-17 T 21-04-2016 SDY_0776 85e55479b8e08bf91d92212dae27b687 530 PANTHER PTHR19211:SF38 2 526 0.0 T 21-04-2016 SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Gene3D G3DSA:3.40.50.300 318 528 3.4E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0776 85e55479b8e08bf91d92212dae27b687 530 PANTHER PTHR19211 2 526 0.0 T 21-04-2016 SDY_0776 85e55479b8e08bf91d92212dae27b687 530 SMART SM00382 26 228 7.1E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0776 85e55479b8e08bf91d92212dae27b687 530 SMART SM00382 344 521 1.4E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Gene3D G3DSA:3.40.50.300 132 280 5.1E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Gene3D G3DSA:3.40.50.300 5 100 5.1E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Pfam PF12848 ABC transporter 224 309 5.2E-21 T 21-04-2016 IPR032781 ABC-transporter extension domain SDY_0776 85e55479b8e08bf91d92212dae27b687 530 SUPERFAMILY SSF52540 298 523 3.33E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0776 85e55479b8e08bf91d92212dae27b687 530 SUPERFAMILY SSF52540 6 237 6.73E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Pfam PF00005 ABC transporter 18 184 1.9E-19 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0776 85e55479b8e08bf91d92212dae27b687 530 Pfam PF00005 ABC transporter 336 467 4.9E-24 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 SUPERFAMILY SSF51556 8 347 2.76E-149 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_2091 fc49099fccf409419c854e3a96b58df5 348 Gene3D G3DSA:3.20.20.140 6 347 6.2E-135 T 21-04-2016 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 21-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 Pfam PF01979 Amidohydrolase family 15 307 7.3E-22 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 63.59 T 21-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 PIRSF PIRSF001237 4 348 6.0E-142 T 21-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 21-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 5.1E-169 T 21-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 PANTHER PTHR11647 8 334 8.4E-157 T 21-04-2016 SDY_2091 fc49099fccf409419c854e3a96b58df5 348 PANTHER PTHR11647:SF59 8 334 8.4E-157 T 21-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 6.1E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 6.1E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 6.1E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 6.1E-24 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 SUPERFAMILY SSF55920 3 255 4.32E-93 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.8E-114 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PANTHER PTHR10804 1 260 9.5E-190 T 21-04-2016 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 PANTHER PTHR10804:SF75 1 260 9.5E-190 T 21-04-2016 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 44.081 T 21-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 Gene3D G3DSA:3.90.230.10 3 259 1.5E-102 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_0184 c168653e3c8d2bb35f52032fea2ce506 264 Pfam PF00557 Metallopeptidase family M24 12 242 6.1E-54 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 SUPERFAMILY SSF52540 4 170 1.07E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 21-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 Gene3D G3DSA:3.40.50.300 2 172 1.4E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 Pfam PF01202 Shikimate kinase 13 170 9.7E-57 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.319 T 21-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PANTHER PTHR21087 1 173 2.2E-73 T 21-04-2016 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 21-04-2016 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 21-04-2016 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 21-04-2016 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 21-04-2016 SDY_3689 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 21-04-2016 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 21-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 PANTHER PTHR11560 1 165 1.3E-61 T 21-04-2016 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.856 T 21-04-2016 IPR022973 Ribosomal protein L10 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 Pfam PF00466 Ribosomal protein L10 5 101 6.2E-26 T 21-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 SUPERFAMILY SSF160369 4 160 2.48E-48 T 21-04-2016 SDY_3743 bb3e0d7cf8c73e995b255695bc36b470 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 21-04-2016 SDY_3064 5e3293ff3b65652b457eee98489ffec2 219 PANTHER PTHR30353 1 216 3.4E-172 T 21-04-2016 IPR032818 DedA family SDY_3064 5e3293ff3b65652b457eee98489ffec2 219 Pfam PF09335 SNARE associated Golgi protein 48 173 9.5E-19 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_3064 5e3293ff3b65652b457eee98489ffec2 219 PANTHER PTHR30353:SF10 1 216 3.4E-172 T 21-04-2016 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 11 82 1.0E-18 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 90 164 6.9E-19 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-73 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-40 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.551 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PIRSF PIRSF002162 1 177 6.4E-44 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 2 82 7.5E-29 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.3E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.3E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.3E-34 T 21-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PANTHER PTHR11655 1 176 1.9E-87 T 21-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 PANTHER PTHR11655:SF14 1 176 1.9E-87 T 21-04-2016 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 1 82 9.55E-24 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 83 177 1.1E-35 T 21-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_3481 fca3d6d18d398b02d8ecfea1adc85eee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 21-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1979 8657616a99943f6093408e23c167440a 232 PANTHER PTHR38106 1 232 2.5E-93 T 21-04-2016 SDY_1979 8657616a99943f6093408e23c167440a 232 SUPERFAMILY SSF48657 5 119 5.36E-40 T 21-04-2016 IPR016103 ProQ/FinO domain SDY_1979 8657616a99943f6093408e23c167440a 232 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 231 30.391 T 21-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 SDY_1979 8657616a99943f6093408e23c167440a 232 Pfam PF04352 ProQ/FINO family 8 115 5.0E-42 T 21-04-2016 IPR016103 ProQ/FinO domain SDY_1979 8657616a99943f6093408e23c167440a 232 PANTHER PTHR38106:SF1 1 232 2.5E-93 T 21-04-2016 SDY_1979 8657616a99943f6093408e23c167440a 232 SMART SM00945 5 119 6.6E-60 T 21-04-2016 IPR016103 ProQ/FinO domain SDY_1979 8657616a99943f6093408e23c167440a 232 Gene3D G3DSA:1.10.1710.10 4 118 3.2E-36 T 21-04-2016 IPR016103 ProQ/FinO domain SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 21-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SMART SM01086 653 744 7.4E-36 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PANTHER PTHR11638:SF111 1 756 0.0 T 21-04-2016 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PANTHER PTHR11638 1 756 0.0 T 21-04-2016 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Gene3D G3DSA:1.10.8.60 352 435 4.4E-30 T 21-04-2016 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Gene3D G3DSA:1.10.1780.10 1 141 1.4E-45 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.7E-15 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 21-04-2016 IPR028299 ClpA/B, conserved site 2 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 7.1E-25 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 4.9E-13 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.2E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.2E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.2E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.2E-35 T 21-04-2016 IPR001270 ClpA/B family GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 21-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SUPERFAMILY SSF81923 1 141 1.96E-58 T 21-04-2016 IPR004176 Clp, N-terminal GO:0019538 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SUPERFAMILY SSF52540 169 426 1.72E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 1.8E-47 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SMART SM00382 487 654 2.2E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SMART SM00382 206 352 2.1E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Gene3D G3DSA:3.40.50.300 167 350 5.8E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Gene3D G3DSA:1.10.8.60 664 753 2.7E-32 T 21-04-2016 SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 Gene3D G3DSA:3.40.50.300 442 663 3.3E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2379 04817c1e16a20eafba5f988141d4ad71 758 SUPERFAMILY SSF52540 437 744 1.5E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1440 18a41fb479bf28bc78fba1ac9c0718c9 125 PANTHER PTHR33293 1 124 2.3E-41 T 21-04-2016 SDY_1440 18a41fb479bf28bc78fba1ac9c0718c9 125 Pfam PF03400 IS1 transposase 1 125 2.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 19 76 3.5E-5 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 Gene3D G3DSA:1.20.1050.10 85 188 4.6E-17 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 PANTHER PTHR11260:SF178 2 202 4.6E-55 T 21-04-2016 SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 SUPERFAMILY SSF47616 76 200 9.81E-17 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 PANTHER PTHR11260 2 202 4.6E-55 T 21-04-2016 SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 SUPERFAMILY SSF52833 17 76 7.48E-8 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1951 179b65a2abdb92a6d4733a8179176c62 202 Gene3D G3DSA:3.40.30.10 19 84 1.2E-9 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00421 141 198 2.1E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:3.40.50.2300 2 113 9.0E-23 T 21-04-2016 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 PANTHER PTHR26402:SF151 1 202 2.4E-47 T 21-04-2016 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 PANTHER PTHR26402 1 202 2.4E-47 T 21-04-2016 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF46894 134 202 1.73E-17 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 198 5.0E-22 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00072 Response regulator receiver domain 4 114 4.0E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:1.10.10.10 114 203 5.9E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 7.9E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 7.9E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 7.9E-11 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF52172 1 124 1.85E-23 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4477 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00448 1 113 1.1E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0338 3da77138406d0585904695f116c8acb4 229 Gene3D G3DSA:1.10.10.10 129 226 7.6E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0338 3da77138406d0585904695f116c8acb4 229 Gene3D G3DSA:3.40.50.2300 3 124 2.8E-41 T 21-04-2016 SDY_0338 3da77138406d0585904695f116c8acb4 229 SUPERFAMILY SSF52172 3 184 2.57E-43 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0338 3da77138406d0585904695f116c8acb4 229 PANTHER PTHR26402 3 228 2.1E-156 T 21-04-2016 SDY_0338 3da77138406d0585904695f116c8acb4 229 Pfam PF00072 Response regulator receiver domain 5 117 4.4E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0338 3da77138406d0585904695f116c8acb4 229 SMART SM00448 3 116 6.2E-46 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0338 3da77138406d0585904695f116c8acb4 229 SMART SM00862 150 225 1.8E-28 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_0338 3da77138406d0585904695f116c8acb4 229 PANTHER PTHR26402:SF576 3 228 2.1E-156 T 21-04-2016 SDY_0338 3da77138406d0585904695f116c8acb4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-28 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_0338 3da77138406d0585904695f116c8acb4 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.6E-117 T 21-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 SDY_0506 6d29baad981126a224d73465188ae18c 209 PANTHER PTHR26402 2 201 4.8E-115 T 21-04-2016 SDY_0506 6d29baad981126a224d73465188ae18c 209 SUPERFAMILY SSF52172 1 118 4.13E-29 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0506 6d29baad981126a224d73465188ae18c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 7.4E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 7.4E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 7.4E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 SMART SM00421 143 200 2.7E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 Gene3D G3DSA:1.10.10.10 146 205 1.7E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0506 6d29baad981126a224d73465188ae18c 209 SUPERFAMILY SSF46894 133 206 1.5E-20 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 Pfam PF00072 Response regulator receiver domain 4 116 2.1E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0506 6d29baad981126a224d73465188ae18c 209 PANTHER PTHR26402:SF612 2 201 4.8E-115 T 21-04-2016 SDY_0506 6d29baad981126a224d73465188ae18c 209 SMART SM00448 2 115 1.9E-25 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0506 6d29baad981126a224d73465188ae18c 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0506 6d29baad981126a224d73465188ae18c 209 Gene3D G3DSA:3.40.50.2300 1 145 5.0E-33 T 21-04-2016 SDY_0506 6d29baad981126a224d73465188ae18c 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 5.4E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 PANTHER PTHR35891:SF2 1 208 3.1E-103 T 21-04-2016 SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 Gene3D G3DSA:3.40.30.10 1 119 1.9E-44 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 Gene3D G3DSA:3.40.30.10 121 203 1.3E-23 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 Pfam PF01323 DSBA-like thioredoxin domain 40 197 2.9E-31 T 21-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 PIRSF PIRSF001488 1 208 6.1E-92 T 21-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 PANTHER PTHR35891 1 208 3.1E-103 T 21-04-2016 SDY_3885 4f6bb03b7cd4f91d2fd729692f7a4c81 208 SUPERFAMILY SSF52833 21 206 2.4E-46 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.2E-75 T 21-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 Gene3D G3DSA:3.30.1330.40 3 127 1.4E-32 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 21-04-2016 IPR019897 RidA, conserved site SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 SUPERFAMILY SSF55298 3 126 3.93E-34 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.886 T 21-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 1.4E-32 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_0985 f32afda8bbffe3f14c1dd9b290121171 128 PANTHER PTHR11803 5 128 3.7E-33 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_4524 4443201c69f83993fd291831999936fe 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.1E-25 T 21-04-2016 IPR014318 Phage shock protein, PspG SDY_4524 4443201c69f83993fd291831999936fe 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 2.2E-26 T 21-04-2016 IPR014318 Phage shock protein, PspG SDY_3414 9440797ba580683cf1161762f9ec51e7 87 PANTHER PTHR34156 2 87 1.3E-54 T 21-04-2016 SDY_3414 9440797ba580683cf1161762f9ec51e7 87 SUPERFAMILY SSF159871 3 87 7.85E-27 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_3414 9440797ba580683cf1161762f9ec51e7 87 Gene3D G3DSA:3.30.1660.10 18 87 5.5E-31 T 21-04-2016 IPR025543 Dodecin-like SDY_3414 9440797ba580683cf1161762f9ec51e7 87 PANTHER PTHR34156:SF5 2 87 1.3E-54 T 21-04-2016 SDY_3414 9440797ba580683cf1161762f9ec51e7 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 2.8E-22 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 Gene3D G3DSA:2.170.230.10 155 263 3.8E-48 T 21-04-2016 IPR019766 Peptidase S26A, all-beta subdomain SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PANTHER PTHR12383:SF27 246 308 6.3E-109 T 21-04-2016 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PANTHER PTHR12383:SF27 3 192 6.3E-109 T 21-04-2016 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 Pfam PF10502 Signal peptidase, peptidase S26 261 302 2.5E-7 T 21-04-2016 IPR019533 Peptidase S26 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 SUPERFAMILY SSF51306 78 323 1.74E-84 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 305 3.8E-43 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PANTHER PTHR12383 246 308 6.3E-109 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PANTHER PTHR12383 3 192 6.3E-109 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 21-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 21-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 21-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 Gene3D G3DSA:2.10.109.10 264 309 7.2E-57 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 Gene3D G3DSA:2.10.109.10 76 154 7.2E-57 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 21-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SDY_2809 f3e33fe74b0ac081bf0f96c80a9e5456 324 Pfam PF00717 Peptidase S24-like 86 160 1.2E-20 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B SDY_0127 2c63b2cb83bb51f4293ee381c655ac97 170 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 167 4.0E-53 T 21-04-2016 IPR009502 Secretion monitor GO:0045182 SDY_0127 2c63b2cb83bb51f4293ee381c655ac97 170 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 170 2.0E-88 T 21-04-2016 IPR009502 Secretion monitor GO:0045182 SDY_0127 2c63b2cb83bb51f4293ee381c655ac97 170 PIRSF PIRSF004572 1 170 5.9E-85 T 21-04-2016 IPR009502 Secretion monitor GO:0045182 SDY_0127 2c63b2cb83bb51f4293ee381c655ac97 170 Hamap MF_01332 Secretion monitor [secM]. 1 170 42.81 T 21-04-2016 IPR009502 Secretion monitor GO:0045182 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 2.4E-13 T 21-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 21-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 PANTHER PTHR11993:SF30 124 544 0.0 T 21-04-2016 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 PANTHER PTHR11993 124 544 0.0 T 21-04-2016 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 SUPERFAMILY SSF143243 9 194 1.83E-47 T 21-04-2016 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 6.0E-25 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 3.9E-25 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 465 537 2.3E-11 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 1.2E-34 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 Gene3D G3DSA:1.10.645.10 166 536 1.2E-87 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2918 839947d94bf7f5706cc9fe1e81929fb6 569 SUPERFAMILY SSF56762 193 537 4.84E-109 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_3666 a92cc032b8a01cb91bacd45a79b194b6 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 1.2E-15 T 21-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC SDY_3666 a92cc032b8a01cb91bacd45a79b194b6 78 Gene3D G3DSA:1.10.10.10 6 55 2.4E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3666 a92cc032b8a01cb91bacd45a79b194b6 78 SUPERFAMILY SSF46785 1 76 1.37E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3666 a92cc032b8a01cb91bacd45a79b194b6 78 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 78 29.294 T 21-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 21-04-2016 IPR033379 Histidine acid phosphatase active site SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 21-04-2016 IPR033379 Histidine acid phosphatase active site SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 Gene3D G3DSA:3.40.50.1240 26 141 2.8E-84 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 Gene3D G3DSA:3.40.50.1240 276 412 2.8E-84 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 PANTHER PTHR11567:SF135 1 412 0.0 T 21-04-2016 SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 3.8E-15 T 21-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 SUPERFAMILY SSF53254 24 411 7.74E-78 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 Gene3D G3DSA:3.40.50.1240 142 274 2.5E-68 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0978 856dd81bb76499c1afcc3c85c60d8cd2 413 PANTHER PTHR11567 1 412 0.0 T 21-04-2016 SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 SMART SM00382 26 214 1.6E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 Pfam PF00005 ABC transporter 17 161 7.5E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 PANTHER PTHR24220:SF485 3 202 1.9E-135 T 21-04-2016 SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 PANTHER PTHR24220 3 202 1.9E-135 T 21-04-2016 SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 SUPERFAMILY SSF52540 1 198 1.6E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1519 cc55e7a950169ef9f65dd57bef233508 217 Gene3D G3DSA:3.40.50.300 1 197 2.0E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2599 652cbcd132cc42d94fc091a31a2fc418 180 Gene3D G3DSA:3.30.70.1290 3 142 1.2E-48 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_2599 652cbcd132cc42d94fc091a31a2fc418 180 Pfam PF01797 Transposase IS200 like 20 139 2.9E-39 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_2599 652cbcd132cc42d94fc091a31a2fc418 180 SMART SM01321 19 139 2.8E-40 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_2599 652cbcd132cc42d94fc091a31a2fc418 180 SUPERFAMILY SSF143422 11 140 2.22E-44 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_2599 652cbcd132cc42d94fc091a31a2fc418 180 PANTHER PTHR33360 10 155 3.5E-47 T 21-04-2016 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 Gene3D G3DSA:3.40.30.10 4 168 8.2E-47 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 PANTHER PTHR10681:SF81 1 168 5.2E-54 T 21-04-2016 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.965 T 21-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 Pfam PF08534 Redoxin 20 163 3.9E-31 T 21-04-2016 IPR013740 Redoxin GO:0016491 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 21-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 PANTHER PTHR10681 1 168 5.2E-54 T 21-04-2016 SDY_1402 01b386065c3f2d61e5463a7369bbc6c7 168 SUPERFAMILY SSF52833 4 164 3.34E-45 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 2.6E-60 T 21-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SUPERFAMILY SSF50156 271 379 9.58E-23 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SMART SM00228 289 371 4.5E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SMART SM00228 396 466 1.5E-9 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939 105 416 7.8E-269 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939 30 61 7.8E-269 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939 81 89 7.8E-269 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SUPERFAMILY SSF50156 399 471 2.76E-16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 393 463 3.6E-12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 287 367 4.1E-15 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Gene3D G3DSA:2.40.10.10 38 178 2.3E-36 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 472 1.7E-166 T 21-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Gene3D G3DSA:2.30.42.10 406 471 3.0E-20 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Gene3D G3DSA:2.30.42.10 291 388 6.9E-29 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Pfam PF13365 Trypsin-like peptidase domain 114 250 2.6E-32 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SUPERFAMILY SSF50494 7 59 4.48E-64 T 21-04-2016 IPR009003 Peptidase S1, PA clan SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 SUPERFAMILY SSF50494 111 298 4.48E-64 T 21-04-2016 IPR009003 Peptidase S1, PA clan SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 Gene3D G3DSA:2.40.10.10 179 290 9.3E-44 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939:SF84 105 416 7.8E-269 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939:SF84 30 61 7.8E-269 T 21-04-2016 SDY_0178 eb9b734a05189c79374f70d27d9f8341 474 PANTHER PTHR22939:SF84 81 89 7.8E-269 T 21-04-2016 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 PANTHER PTHR11609:SF7 1 381 4.8E-226 T 21-04-2016 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 2.4E-195 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 SUPERFAMILY SSF56059 113 314 2.65E-55 T 21-04-2016 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 Gene3D G3DSA:3.40.50.20 5 120 2.1E-41 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 Pfam PF02222 ATP-grasp domain 123 295 2.7E-56 T 21-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 Gene3D G3DSA:3.30.470.20 200 388 1.2E-67 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 SUPERFAMILY SSF52440 3 112 1.35E-36 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 SUPERFAMILY SSF51246 319 391 3.3E-18 T 21-04-2016 IPR011054 Rudiment single hybrid motif SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 PANTHER PTHR11609 1 381 4.8E-226 T 21-04-2016 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 Gene3D G3DSA:3.30.1490.20 123 199 7.5E-27 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_1135 4e9b270a58c566a8e8ad3e18eda9c8b2 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 52.223 T 21-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SDY_0683 1ed5362504934d484cbe923df0583e6c 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 2.0E-42 T 21-04-2016 IPR011846 Cyd operon protein YbgE SDY_0683 1ed5362504934d484cbe923df0583e6c 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 6.8E-34 T 21-04-2016 IPR011846 Cyd operon protein YbgE SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 PANTHER PTHR10196 1 482 0.0 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 14 473 2.6E-254 T 21-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 PANTHER PTHR10196:SF60 1 482 0.0 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 Gene3D G3DSA:3.30.420.40 11 260 4.4E-55 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 15 259 3.4E-88 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 SUPERFAMILY SSF53067 264 477 2.85E-41 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 269 448 1.3E-21 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 Gene3D G3DSA:3.30.420.40 264 478 2.9E-34 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 PIRSF PIRSF000538 13 482 4.3E-83 T 21-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 SUPERFAMILY SSF53067 15 262 1.54E-61 T 21-04-2016 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 144 156 - T 21-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SDY_3021 85c9b018a03fbe2b87538597f706d84e 482 Hamap MF_00986 L-fuculokinase [fucK]. 13 474 62.412 T 21-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 Pfam PF02954 Bacterial regulatory protein, Fis family 93 132 4.2E-15 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 SUPERFAMILY SSF46689 40 135 5.38E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 PANTHER PTHR32071:SF16 1 143 1.4E-45 T 21-04-2016 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 Gene3D G3DSA:1.10.10.60 82 135 5.0E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 Gene3D G3DSA:1.10.8.60 2 73 3.6E-14 T 21-04-2016 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 PANTHER PTHR32071 1 143 1.4E-45 T 21-04-2016 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 115 135 2.9E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1249 28195d1ea7bead14062d14fd6cb0b03d 143 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 98 115 2.9E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1236 061dff18e4623fd84de3102284d214a7 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 276 5.0E-30 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SDY_1236 061dff18e4623fd84de3102284d214a7 284 Gene3D G3DSA:3.90.1170.20 5 129 1.1E-27 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SDY_1236 061dff18e4623fd84de3102284d214a7 284 TIGRFAM TIGR01334 modD: modD protein 2 278 1.1E-152 T 21-04-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.- SDY_1236 061dff18e4623fd84de3102284d214a7 284 PIRSF PIRSF006250 1 280 1.8E-66 T 21-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SDY_1236 061dff18e4623fd84de3102284d214a7 284 SUPERFAMILY SSF51690 121 276 1.45E-35 T 21-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SDY_1236 061dff18e4623fd84de3102284d214a7 284 PANTHER PTHR11948 1 279 3.0E-45 T 21-04-2016 SDY_1236 061dff18e4623fd84de3102284d214a7 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 7.1E-20 T 21-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SDY_1236 061dff18e4623fd84de3102284d214a7 284 PANTHER PTHR11948:SF1 1 279 3.0E-45 T 21-04-2016 SDY_1236 061dff18e4623fd84de3102284d214a7 284 Gene3D G3DSA:3.20.20.70 130 267 2.7E-35 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1236 061dff18e4623fd84de3102284d214a7 284 SUPERFAMILY SSF54675 2 105 9.03E-22 T 21-04-2016 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 SUPERFAMILY SSF47323 316 460 3.79E-45 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 SUPERFAMILY SSF52374 1 313 1.05E-102 T 21-04-2016 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.8E-145 T 21-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 Gene3D G3DSA:3.40.50.620 20 305 2.7E-112 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.7E-200 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 Gene3D G3DSA:1.20.120.640 306 392 7.7E-30 T 21-04-2016 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 PANTHER PTHR10890 1 460 2.4E-268 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 21-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.616 T 21-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 Pfam PF09190 DALR domain 341 402 6.7E-26 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SDY_0278 f69ce4d4d3c71636266765c36d287ed5 461 SMART SM00840 341 402 3.1E-29 T 21-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 PANTHER PTHR30429 3 271 1.1E-158 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 PANTHER PTHR30429:SF1 3 271 1.1E-158 T 21-04-2016 SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 SUPERFAMILY SSF53850 33 271 2.17E-84 T 21-04-2016 SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 PIRSF PIRSF002854 1 271 1.6E-108 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 Pfam PF03180 NLPA lipoprotein 33 271 1.4E-100 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 7.8E-152 T 21-04-2016 IPR004872 Lipoprotein NlpA family SDY_0216 3cb1198aa00d0487eeacef72daef7f06 271 Gene3D G3DSA:3.40.190.10 30 162 2.3E-60 T 21-04-2016 SDY_1066 82cf43d91718c79714fad9c1b77b9df5 162 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 21 159 1.1E-26 T 21-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 Gene3D G3DSA:1.10.3720.10 19 281 1.7E-48 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 1.9E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 4.2E-112 T 21-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 7.3E-116 T 21-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 PANTHER PTHR30406 1 283 9.3E-161 T 21-04-2016 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 PANTHER PTHR30406:SF1 1 283 9.3E-161 T 21-04-2016 SDY_2619 df96e6a6a823dc1747324fd8f98843bc 291 SUPERFAMILY SSF161098 16 268 3.92E-52 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 Pfam PF00884 Sulfatase 163 446 3.0E-22 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 PANTHER PTHR10342 152 490 1.4E-94 T 21-04-2016 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 54.35 T 21-04-2016 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20|UniPathway: UPA00637 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 Gene3D G3DSA:3.40.720.10 163 465 7.1E-24 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 PANTHER PTHR10342:SF236 513 565 1.4E-94 T 21-04-2016 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 PANTHER PTHR10342:SF236 152 490 1.4E-94 T 21-04-2016 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 SUPERFAMILY SSF53649 161 469 8.07E-31 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4613 d88b85e57632b1bc0c1d1e463575e772 763 PANTHER PTHR10342 513 565 1.4E-94 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 PANTHER PTHR10196:SF62 1 558 0.0 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 SUPERFAMILY SSF53067 5 284 1.87E-21 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 PANTHER PTHR10196 1 558 0.0 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 6.7E-280 T 21-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 Gene3D G3DSA:3.30.420.40 3 282 3.5E-28 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 Gene3D G3DSA:3.30.420.40 285 545 2.1E-41 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 SUPERFAMILY SSF53067 285 545 3.37E-40 T 21-04-2016 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 295 501 6.7E-35 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SDY_0090 e3ccb2c8a2913ce9883316539470f36e 566 Hamap MF_00520 Ribulokinase [araB]. 1 558 59.493 T 21-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 PANTHER PTHR23309:SF6 7 712 0.0 T 21-04-2016 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 SUPERFAMILY SSF48179 492 595 1.79E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Gene3D G3DSA:1.10.1040.10 494 586 1.7E-29 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 4.0E-43 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 21-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Gene3D G3DSA:3.40.50.720 305 493 6.8E-56 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Gene3D G3DSA:3.90.226.10 3 204 2.8E-67 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 53.93 T 21-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 703 1.2E-4 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 1.2E-28 T 21-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 5.6E-60 T 21-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 SUPERFAMILY SSF48179 615 706 4.0E-24 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 Gene3D G3DSA:1.10.1040.10 624 709 5.7E-22 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 SUPERFAMILY SSF52096 7 299 2.96E-69 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 SUPERFAMILY SSF51735 308 489 9.53E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 PANTHER PTHR23309 7 712 0.0 T 21-04-2016 SDY_2542 ddd4dc023e1da79be5b88035a23b1b38 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 21-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SDY_0026 6b38f5ed43a61eea2ece7fb07abb5f4c 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 8.6E-43 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 SDY_0026 6b38f5ed43a61eea2ece7fb07abb5f4c 120 PIRSF PIRSF006287 1 120 8.2E-50 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 SDY_0026 6b38f5ed43a61eea2ece7fb07abb5f4c 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 2.0E-63 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 SDY_0026 6b38f5ed43a61eea2ece7fb07abb5f4c 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.142 T 21-04-2016 IPR008249 Uncharacterised protein family UPF0231 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SUPERFAMILY SSF52540 210 458 2.77E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Gene3D G3DSA:3.40.50.300 208 346 4.0E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Pfam PF16124 RecQ zinc-binding 345 406 1.5E-15 T 21-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SMART SM00490 252 333 8.1E-29 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 15 603 3.3E-280 T 21-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Pfam PF00271 Helicase conserved C-terminal domain 226 333 1.2E-20 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Gene3D G3DSA:1.10.10.10 347 517 2.0E-60 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 PANTHER PTHR13710 15 611 0.0 T 21-04-2016 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SUPERFAMILY SSF52540 9 203 5.46E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 17 466 2.6E-209 T 21-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SMART SM00341 531 611 3.9E-31 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Pfam PF00570 HRDC domain 535 601 2.4E-23 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SUPERFAMILY SSF47819 532 607 2.03E-26 T 21-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Gene3D G3DSA:1.10.150.80 532 603 5.0E-24 T 21-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Pfam PF09382 RQC domain 408 516 5.1E-35 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SMART SM00956 413 516 4.9E-48 T 21-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 PANTHER PTHR13710:SF81 15 611 0.0 T 21-04-2016 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Gene3D G3DSA:3.40.50.300 8 204 2.2E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 Pfam PF00270 DEAD/DEAH box helicase 30 189 6.6E-19 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3921 ec99828ba9c0a1c54b2147c8638cc1d1 611 SMART SM00487 24 218 6.4E-30 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.662 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 Gene3D G3DSA:3.40.50.720 2 171 2.8E-23 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 5.2E-138 T 21-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 8.5E-47 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 PANTHER PTHR10366 1 308 4.3E-126 T 21-04-2016 SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 SUPERFAMILY SSF51735 1 306 3.12E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 PANTHER PTHR10366:SF469 1 308 4.3E-126 T 21-04-2016 SDY_4051 dd64300fc1dedf9d9d8c340e757ce6a3 310 Gene3D G3DSA:3.90.25.10 172 291 5.3E-37 T 21-04-2016 SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 SUPERFAMILY SSF52540 1 58 2.92E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Gene3D G3DSA:3.40.50.300 175 222 2.3E-4 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 999 2.2E-11 T 21-04-2016 SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Gene3D G3DSA:3.40.50.300 1 174 1.6E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Gene3D G3DSA:3.40.50.300 910 1032 1.6E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Gene3D G3DSA:3.40.50.300 791 792 1.6E-34 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 PANTHER PTHR32114:SF2 2 1044 1.3E-144 T 21-04-2016 SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 SUPERFAMILY SSF52540 248 415 2.92E-9 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 SUPERFAMILY SSF52540 1 271 2.62E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1037 0.0 T 21-04-2016 IPR004592 Nuclease SbcC, gammaproteobacteria type SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 SUPERFAMILY SSF52540 777 1032 2.3E-19 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Pfam PF13476 AAA domain 5 261 4.5E-22 T 21-04-2016 SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 PANTHER PTHR32114 2 1044 1.3E-144 T 21-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 SDY_0341 4a81cc07149a5a509d5631cce24df58f 1045 Gene3D G3DSA:3.40.50.300 223 275 4.8E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PANTHER PTHR32472 5 456 1.9E-228 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 5.4E-240 T 21-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.40.50.300 62 280 3.3E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13481 AAA domain 88 225 4.6E-15 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.7E-9 T 21-04-2016 SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 SMART SM00382 94 248 3.3E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 258 272 1.33E-41 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 306 457 1.33E-41 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.30.230.10 288 456 1.5E-38 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_4650 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF52540 71 291 1.76E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 Gene3D G3DSA:2.50.20.10 24 204 6.9E-61 T 21-04-2016 SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 192 1.1E-58 T 21-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 PANTHER PTHR35869 1 204 3.6E-64 T 21-04-2016 SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 2 204 5.7E-124 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 SUPERFAMILY SSF89392 23 203 1.22E-57 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SDY_2370 712ac1c120c1450b4ffa9d7106c4cd98 204 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 202 33.028 T 21-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 Gene3D G3DSA:3.20.20.70 8 347 2.3E-146 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 PIRSF PIRSF001361 1 348 1.7E-157 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 PANTHER PTHR21225 1 348 1.6E-281 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 PANTHER PTHR21225:SF6 1 348 1.6E-281 T 21-04-2016 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 SUPERFAMILY SSF51569 7 347 1.88E-131 T 21-04-2016 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.0E-176 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_1798 e79f1c46fb7c62c398f28553f0c20075 348 Pfam PF00793 DAHP synthetase I family 43 336 1.0E-109 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_3613 3ed844d1b49fbe63afcfc819444fda72 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 47 352 2.0E-161 T 21-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SDY_3613 3ed844d1b49fbe63afcfc819444fda72 352 Pfam PF02687 FtsX-like permease family 228 342 2.3E-11 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SDY_3613 3ed844d1b49fbe63afcfc819444fda72 352 PIRSF PIRSF003097 50 348 3.9E-110 T 21-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SDY_3613 3ed844d1b49fbe63afcfc819444fda72 352 PANTHER PTHR30489 45 351 2.7E-58 T 21-04-2016 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 PIRSF PIRSF001478 1 500 1.2E-259 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 Pfam PF02610 L-arabinose isomerase 5 359 2.4E-179 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 8.4E-46 T 21-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 SUPERFAMILY SSF50443 329 497 6.28E-72 T 21-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 SUPERFAMILY SSF53743 1 326 8.63E-126 T 21-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 0.0 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.887 T 21-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 PANTHER PTHR38464:SF1 2 500 3.0E-243 T 21-04-2016 SDY_0089 08002d8d5e2d364cad7894ca975c1b97 500 PANTHER PTHR38464 2 500 3.0E-243 T 21-04-2016 SDY_4241 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_4241 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_4241 94386d8fbee58bf233110321d1ad1b3b 131 Pfam PF03400 IS1 transposase 2 131 3.9E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2735 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2735 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2735 94386d8fbee58bf233110321d1ad1b3b 131 Pfam PF03400 IS1 transposase 2 131 3.9E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3244 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_3244 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_3244 94386d8fbee58bf233110321d1ad1b3b 131 Pfam PF03400 IS1 transposase 2 131 3.9E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2079 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_2079 94386d8fbee58bf233110321d1ad1b3b 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_2079 94386d8fbee58bf233110321d1ad1b3b 131 Pfam PF03400 IS1 transposase 2 131 3.9E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2706 01750e06975661caa7025b99de2f043c 78 SUPERFAMILY SSF161187 8 76 3.01E-29 T 21-04-2016 IPR029037 YfgJ-like SDY_2706 01750e06975661caa7025b99de2f043c 78 Pfam PF07191 zinc-ribbons 11 75 1.3E-29 T 21-04-2016 IPR010807 Protein of unknown function DUF1407 SDY_2706 01750e06975661caa7025b99de2f043c 78 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 8 78 2.0E-35 T 21-04-2016 IPR010807 Protein of unknown function DUF1407 SDY_2706 01750e06975661caa7025b99de2f043c 78 Gene3D G3DSA:2.10.290.10 8 77 4.0E-35 T 21-04-2016 IPR029037 YfgJ-like SDY_3653 6154844e1871d2cc180c86bad90ba268 184 PANTHER PTHR11118 19 184 6.3E-91 T 21-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SDY_3653 6154844e1871d2cc180c86bad90ba268 184 PANTHER PTHR11118:SF3 19 184 6.3E-91 T 21-04-2016 SDY_3653 6154844e1871d2cc180c86bad90ba268 184 SUPERFAMILY SSF103365 19 184 3.92E-60 T 21-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SDY_3653 6154844e1871d2cc180c86bad90ba268 184 Pfam PF01139 tRNA-splicing ligase RtcB 19 184 1.1E-66 T 21-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SDY_0123 458d5733fb7c7c3b9f1fc305bfcd847c 276 Pfam PF08478 POTRA domain, FtsQ-type 56 126 1.6E-19 T 21-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SDY_0123 458d5733fb7c7c3b9f1fc305bfcd847c 276 PANTHER PTHR35851 1 272 1.3E-83 T 21-04-2016 SDY_0123 458d5733fb7c7c3b9f1fc305bfcd847c 276 PANTHER PTHR35851:SF1 1 272 1.3E-83 T 21-04-2016 SDY_0123 458d5733fb7c7c3b9f1fc305bfcd847c 276 Pfam PF03799 Cell division protein FtsQ 130 247 1.9E-27 T 21-04-2016 IPR005548 Cell division protein FtsQ/DivIB SDY_0123 458d5733fb7c7c3b9f1fc305bfcd847c 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 255 26.189 T 21-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82693 135 182 2.3E-27 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82693 274 330 2.3E-27 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:3.30.2090.10 181 275 6.5E-24 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82714 182 271 5.1E-20 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1049 0.0 T 21-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PANTHER PTHR32063:SF13 1 1048 0.0 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:3.30.70.1430 569 671 1.2E-41 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82866 296 497 3.27E-48 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:3.30.2090.10 724 812 4.6E-28 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82693 567 671 2.25E-33 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.4E-115 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82693 38 132 1.46E-27 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82866 809 1033 1.44E-43 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-36 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 SUPERFAMILY SSF82714 725 812 1.24E-22 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:1.10.3850.10 817 1030 7.1E-55 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 Gene3D G3DSA:1.10.3850.10 278 498 4.9E-60 T 21-04-2016 SDY_0457 9f760e9a0e55989998309f03c1cf7661 1049 PANTHER PTHR32063 1 1048 0.0 T 21-04-2016 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 PANTHER PTHR30606:SF7 2 306 2.1E-254 T 21-04-2016 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 1.2E-118 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.157 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.465 T 21-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 PIRSF PIRSF026649 3 305 6.1E-92 T 21-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 PANTHER PTHR30606 2 306 2.1E-254 T 21-04-2016 SDY_2576 0c00ef84f964b9e43755a81df023dda0 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 2.7E-143 T 21-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PANTHER PTHR11946 282 928 0.0 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PANTHER PTHR11946 6 259 0.0 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 2.7E-27 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 SUPERFAMILY SSF52374 403 648 4.16E-137 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 SUPERFAMILY SSF52374 3 202 4.16E-137 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 5.6E-33 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 5.6E-33 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 5.6E-33 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-33 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 5.6E-33 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 SUPERFAMILY SSF47323 652 929 1.05E-79 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 2.2E-9 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Gene3D G3DSA:3.90.740.10 206 389 2.6E-57 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 21-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.603 T 21-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Gene3D G3DSA:1.10.730.10 641 827 2.9E-43 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 SUPERFAMILY SSF50677 204 403 7.12E-56 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Gene3D G3DSA:3.40.50.620 403 636 5.8E-135 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Gene3D G3DSA:3.40.50.620 17 205 5.8E-135 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PANTHER PTHR11946:SF11 282 928 0.0 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 PANTHER PTHR11946:SF11 6 259 0.0 T 21-04-2016 SDY_0048 0ca2e65eee910ef74a9c13ad4f3a66c9 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 8.4E-242 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 1.9E-84 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 21-04-2016 IPR024002 Formate/nitrite transporter, conserved site SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 Gene3D G3DSA:1.20.1080.10 24 250 3.2E-60 T 21-04-2016 IPR023271 Aquaporin-like SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 PANTHER PTHR30520 1 266 1.8E-131 T 21-04-2016 SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 PANTHER PTHR30520:SF5 1 266 1.8E-131 T 21-04-2016 SDY_3529 641a7df4be1aed7619e6cf8e0d63f177 268 Pfam PF01226 Formate/nitrite transporter 20 247 7.9E-57 T 21-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 21-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 SMART SM00739 4 31 9.8E-4 T 21-04-2016 IPR005824 KOW SDY_3485 19bf73525741bc0b368c63259282d6f7 104 Gene3D G3DSA:2.30.30.30 3 92 7.5E-22 T 21-04-2016 IPR014722 Ribosomal protein L2 domain 2 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.739 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 6.4E-23 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 PANTHER PTHR12903 4 103 4.1E-48 T 21-04-2016 SDY_3485 19bf73525741bc0b368c63259282d6f7 104 SUPERFAMILY SSF50104 4 100 1.26E-32 T 21-04-2016 IPR008991 Translation protein SH3-like domain SDY_3485 19bf73525741bc0b368c63259282d6f7 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 21-04-2016 IPR005824 KOW SDY_3485 19bf73525741bc0b368c63259282d6f7 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 5.9E-39 T 21-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 2.7E-20 T 21-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 PANTHER PTHR33055:SF3 10 209 8.1E-76 T 21-04-2016 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 PANTHER PTHR33055:SF3 257 393 8.1E-76 T 21-04-2016 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 Pfam PF01548 Transposase 14 168 1.2E-43 T 21-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 PANTHER PTHR33055 10 209 8.1E-76 T 21-04-2016 SDY_2189 c31f60900a835d27ceba546a12de15b4 398 PANTHER PTHR33055 257 393 8.1E-76 T 21-04-2016 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.52E-17 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.52E-17 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.52E-17 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 Gene3D G3DSA:3.30.70.600 3 102 2.3E-42 T 21-04-2016 IPR027486 Ribosomal protein S10 domain SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 21-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 SUPERFAMILY SSF54999 5 101 1.02E-35 T 21-04-2016 IPR027486 Ribosomal protein S10 domain SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 SMART SM01403 7 101 8.9E-55 T 21-04-2016 IPR027486 Ribosomal protein S10 domain SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.4E-34 T 21-04-2016 IPR027486 Ribosomal protein S10 domain SDY_3497 9d6129626f9f807a8ce60eb3fa40b527 103 PANTHER PTHR11700 1 102 1.8E-53 T 21-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 SUPERFAMILY SSF52440 171 277 2.53E-37 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 PANTHER PTHR30094 6 387 0.0 T 21-04-2016 SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 PANTHER PTHR30094:SF5 6 387 0.0 T 21-04-2016 SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 14 385 3.5E-150 T 21-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 SUPERFAMILY SSF56059 1 169 1.34E-83 T 21-04-2016 SDY_4403 8e27a774d42036b4e98220c0787a8ed5 387 SUPERFAMILY SSF56059 264 384 1.34E-83 T 21-04-2016 SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 PANTHER PTHR35561:SF1 1 179 4.5E-56 T 21-04-2016 SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 SUPERFAMILY SSF55144 9 177 1.12E-44 T 21-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 8 177 22.253 T 21-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 Gene3D G3DSA:3.90.1140.10 8 179 2.5E-49 T 21-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 9 177 2.8E-44 T 21-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 Pfam PF02834 LigT like Phosphoesterase 95 167 2.0E-7 T 21-04-2016 IPR014051 Phosphoesterase, HXTX SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 Pfam PF02834 LigT like Phosphoesterase 14 92 1.6E-12 T 21-04-2016 IPR014051 Phosphoesterase, HXTX SDY_0163 069bb4646c7ed757f47533d3eb72b419 179 PANTHER PTHR35561 1 179 4.5E-56 T 21-04-2016 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 Gene3D G3DSA:1.10.8.10 1 84 3.6E-31 T 21-04-2016 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 277 2.9E-107 T 21-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 Pfam PF13847 Methyltransferase domain 108 243 1.9E-20 T 21-04-2016 IPR025714 Methyltransferase domain SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 PANTHER PTHR18895 1 277 9.7E-124 T 21-04-2016 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 Gene3D G3DSA:3.40.50.150 86 274 1.7E-71 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 275 47.264 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 3.9E-90 T 21-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 SUPERFAMILY SSF53335 3 275 7.77E-61 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1261 d5d37f119c4af72ed79b493ce4464353 277 PANTHER PTHR18895:SF64 1 277 9.7E-124 T 21-04-2016 SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 39.352 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.8E-75 T 21-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 SUPERFAMILY SSF53271 12 180 7.1E-53 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 Gene3D G3DSA:3.40.50.2020 7 179 8.4E-71 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 PANTHER PTHR11776:SF0 6 183 5.3E-86 T 21-04-2016 SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 PANTHER PTHR11776 6 183 5.3E-86 T 21-04-2016 SDY_0450 6d41a83e06643bdacab599c5dd5ed77c 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 2.1E-15 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SDY_2093 6f389588524177b92bf03f506ced02f3 131 Pfam PF03400 IS1 transposase 2 131 1.1E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2093 6f389588524177b92bf03f506ced02f3 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.049 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PANTHER PTHR15892 1 59 2.9E-30 T 21-04-2016 SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 SUPERFAMILY SSF55129 3 59 3.01E-21 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.9E-19 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Gene3D G3DSA:3.30.1390.20 2 59 1.7E-30 T 21-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-28 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 21-04-2016 IPR018038 Ribosomal protein L30, conserved site SDY_3478 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PIRSF PIRSF002211 1 59 6.5E-30 T 21-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 SUPERFAMILY SSF75620 1 292 3.66E-138 T 21-04-2016 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 SMART SM00937 13 123 6.3E-60 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 291 3.5E-158 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 Pfam PF00472 RF-1 domain 157 265 1.9E-39 T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 21-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 PANTHER PTHR11075 1 290 4.0E-151 T 21-04-2016 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 PANTHER PTHR11075:SF6 1 290 4.0E-151 T 21-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 Pfam PF03462 PCRF domain 3 147 1.1E-49 T 21-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 Gene3D G3DSA:3.30.160.20 155 234 2.8E-37 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_3191 ca1f9e8220ec4989bf599a34ccc00ff5 293 Gene3D G3DSA:1.20.58.410 1 44 6.5E-9 T 21-04-2016 SDY_2885 f4b7687a49e4061c8c65ddda7b06c132 518 SUPERFAMILY SSF55931 4 514 9.81E-203 T 21-04-2016 SDY_2885 f4b7687a49e4061c8c65ddda7b06c132 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 8.9E-172 T 21-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SDY_2885 f4b7687a49e4061c8c65ddda7b06c132 518 PANTHER PTHR38761 2 518 0.0 T 21-04-2016 SDY_2885 f4b7687a49e4061c8c65ddda7b06c132 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 227.977 T 21-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SDY_2885 f4b7687a49e4061c8c65ddda7b06c132 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 1.1E-276 T 21-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 PANTHER PTHR36122 133 238 1.2E-124 T 21-04-2016 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 PANTHER PTHR36122 1 110 1.2E-124 T 21-04-2016 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 1.4E-50 T 21-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 23 231 1.7E-73 T 21-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 PANTHER PTHR36122:SF2 133 238 1.2E-124 T 21-04-2016 SDY_0695 c1a011844c2c3b9747d43e8c7f5cfafb 239 PANTHER PTHR36122:SF2 1 110 1.2E-124 T 21-04-2016 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PANTHER PTHR11686 7 581 4.8E-240 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 392 416 - T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PANTHER PTHR11686:SF9 7 581 4.8E-240 T 21-04-2016 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 472 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 416 434 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 481 498 9.3E-80 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 SUPERFAMILY SSF56235 42 573 6.75E-196 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_3595 511d66f887b7bef235aa06a952cbb236 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 572 3.4E-235 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_3595 511d66f887b7bef235aa06a952cbb236 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 573 1.2E-189 T 21-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SDY_4266 bdbbab191da9cc3c35417a8642f9d6c7 131 PANTHER PTHR11803:SF6 15 130 1.9E-71 T 21-04-2016 SDY_4266 bdbbab191da9cc3c35417a8642f9d6c7 131 SUPERFAMILY SSF55298 7 129 2.36E-35 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_4266 bdbbab191da9cc3c35417a8642f9d6c7 131 Pfam PF01042 Endoribonuclease L-PSP 13 127 4.5E-31 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_4266 bdbbab191da9cc3c35417a8642f9d6c7 131 PANTHER PTHR11803 15 130 1.9E-71 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_4266 bdbbab191da9cc3c35417a8642f9d6c7 131 Gene3D G3DSA:3.30.1330.40 14 130 5.3E-41 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_3519 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_3519 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_3519 9a58754a5c561c0784b75360a962f090 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_3519 9a58754a5c561c0784b75360a962f090 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_3519 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SDY_3519 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site SDY_3519 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF51206 8 136 1.07E-35 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like SDY_3519 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:2.60.120.10 6 143 1.1E-44 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_3519 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 21-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site SDY_3519 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3519 9a58754a5c561c0784b75360a962f090 210 SMART SM00419 160 208 4.5E-17 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_3519 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3519 9a58754a5c561c0784b75360a962f090 210 SMART SM00100 2 122 7.6E-27 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_3519 9a58754a5c561c0784b75360a962f090 210 PANTHER PTHR24567:SF27 1 207 1.5E-156 T 21-04-2016 SDY_3519 9a58754a5c561c0784b75360a962f090 210 PANTHER PTHR24567 1 207 1.5E-156 T 21-04-2016 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Gene3D G3DSA:2.60.40.1250 24 142 1.4E-47 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 9.4E-36 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 ProSitePatterns PS00194 Thioredoxin family active site. 472 490 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 376 1.1E-18 T 21-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Gene3D G3DSA:3.40.30.10 452 561 1.0E-37 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 564 40.581 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 Pfam PF13899 Thioredoxin-like 462 536 1.5E-12 T 21-04-2016 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 PANTHER PTHR32234 1 564 8.1E-250 T 21-04-2016 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 PANTHER PTHR32234:SF0 1 564 8.1E-250 T 21-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 SUPERFAMILY SSF52833 444 561 6.77E-25 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4441 855c642e5d20fa17de867e4b4d1fccaf 565 SUPERFAMILY SSF74863 27 141 7.98E-42 T 21-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SDY_1292 0b0cb1b1d324e1a9fe5af3e008387afa 377 PANTHER PTHR37529 4 377 8.6E-67 T 21-04-2016 SDY_1292 0b0cb1b1d324e1a9fe5af3e008387afa 377 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 1.3E-30 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_1292 0b0cb1b1d324e1a9fe5af3e008387afa 377 SUPERFAMILY SSF53098 120 363 2.73E-27 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1292 0b0cb1b1d324e1a9fe5af3e008387afa 377 Pfam PF01609 Transposase DDE domain 134 358 3.9E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 463 2.4E-38 T 21-04-2016 IPR000160 GGDEF domain SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 SUPERFAMILY SSF55073 308 463 1.16E-37 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 461 9.1E-42 T 21-04-2016 IPR000160 GGDEF domain SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 SMART SM00267 292 465 2.3E-57 T 21-04-2016 IPR000160 GGDEF domain SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 Gene3D G3DSA:3.30.70.270 305 464 4.1E-41 T 21-04-2016 SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 PANTHER PTHR10799:SF710 6 463 1.3E-21 T 21-04-2016 SDY_1629 ec2f2e5803e44f20b1f754830df66a4e 499 PANTHER PTHR10799 6 463 1.3E-21 T 21-04-2016 SDY_3283 41a91077534f25e3d0971c5f590bbb54 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 29.207 T 21-04-2016 IPR026574 Modulator protein MzrA SDY_3283 41a91077534f25e3d0971c5f590bbb54 127 Pfam PF13721 SecD export protein N-terminal TM region 17 104 5.5E-17 T 21-04-2016 IPR027398 SecD export protein N-terminal TM domain SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 SUPERFAMILY SSF56059 98 288 9.16E-50 T 21-04-2016 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.1490.20 103 173 5.9E-8 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.40.50.20 8 102 2.4E-15 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 PANTHER PTHR21621 2 288 4.6E-123 T 21-04-2016 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.6E-83 T 21-04-2016 IPR013651 ATP-grasp fold, RimK-type SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 PANTHER PTHR21621:SF0 2 288 4.6E-123 T 21-04-2016 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.470.20 174 277 1.4E-36 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 6.7E-98 T 21-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SDY_0743 d48fa010ac54350069b258ae5dacfefb 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.195 T 21-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK SDY_0825 f3b79dea2683506701a233bd8732c42a 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.2E-7 T 21-04-2016 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 21-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 PANTHER PTHR22960 5 285 4.4E-135 T 21-04-2016 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 Gene3D G3DSA:3.20.20.70 3 304 3.1E-73 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 SMART SM00729 14 222 2.2E-6 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 Pfam PF04055 Radical SAM superfamily 19 181 8.0E-29 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 6.6E-40 T 21-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 SUPERFAMILY SSF102114 5 289 1.83E-71 T 21-04-2016 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 2.0E-111 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0825 f3b79dea2683506701a233bd8732c42a 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 38.029 T 21-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 Gene3D G3DSA:2.60.300.12 2 96 7.0E-35 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 46.634 T 21-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.6E-62 T 21-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 21-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 PANTHER PTHR10072:SF48 1 107 6.4E-51 T 21-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 PANTHER PTHR10072 1 107 6.4E-51 T 21-04-2016 SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-26 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 SUPERFAMILY SSF89360 1 96 1.01E-32 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_2724 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.9E-38 T 21-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 Gene3D G3DSA:3.40.50.1980 24 138 1.9E-35 T 21-04-2016 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 Pfam PF01497 Periplasmic binding protein 26 217 7.4E-25 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 SUPERFAMILY SSF53807 25 262 9.42E-58 T 21-04-2016 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 48.497 T 21-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 PANTHER PTHR30535 25 262 5.6E-52 T 21-04-2016 SDY_0174 73f05df149122360af9bcce47a4c5ce8 266 Gene3D G3DSA:3.40.50.1980 142 262 2.7E-35 T 21-04-2016 SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 Gene3D G3DSA:3.40.50.1820 16 282 1.5E-35 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 Pfam PF12146 Serine aminopeptidase, S33 32 266 3.8E-63 T 21-04-2016 IPR022742 Serine aminopeptidase, S33 SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 Pfam PF12147 Putative methyltransferase 275 582 7.6E-148 T 21-04-2016 IPR022744 Methyltransferase domain, putative SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 Gene3D G3DSA:3.40.50.150 397 566 1.9E-13 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 PANTHER PTHR11614 1 304 6.2E-212 T 21-04-2016 SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 SUPERFAMILY SSF53335 387 565 1.2E-17 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 PANTHER PTHR11614:SF106 1 304 6.2E-212 T 21-04-2016 SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 SUPERFAMILY SSF53474 7 143 1.23E-33 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1779 46db6c0d1ca2449cd7164dfbebee1dc5 585 SUPERFAMILY SSF53474 210 281 1.23E-33 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3880 1654feb6bfad367a6413bd983c4097bc 310 SMART SM00563 97 224 2.6E-15 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_3880 1654feb6bfad367a6413bd983c4097bc 310 PANTHER PTHR10983 1 307 1.2E-148 T 21-04-2016 SDY_3880 1654feb6bfad367a6413bd983c4097bc 310 PANTHER PTHR10983:SF15 1 307 1.2E-148 T 21-04-2016 SDY_3880 1654feb6bfad367a6413bd983c4097bc 310 SUPERFAMILY SSF69593 19 296 6.41E-24 T 21-04-2016 SDY_3880 1654feb6bfad367a6413bd983c4097bc 310 Pfam PF01553 Acyltransferase 84 216 3.7E-13 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 Gene3D G3DSA:3.40.50.300 238 355 1.3E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 7.8E-13 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 SUPERFAMILY SSF57829 424 465 4.76E-7 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 2.0E-26 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 Gene3D G3DSA:3.40.50.300 3 155 4.6E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031 232 367 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031 443 586 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031 1 163 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031 187 200 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031:SF319 232 367 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031:SF319 443 586 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031:SF319 1 163 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 PANTHER PTHR24031:SF319 187 200 8.6E-229 T 21-04-2016 SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 SMART SM00487 1 185 1.4E-20 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 SUPERFAMILY SSF52540 237 363 8.81E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 SUPERFAMILY SSF52540 50 169 8.81E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0895 879ab30cb0f22e629619b0b1639b9590 586 SMART SM00490 263 345 3.5E-10 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_4532 93f682dc56900629d70acf47473a6500 122 Gene3D G3DSA:1.10.3830.10 3 121 2.4E-46 T 21-04-2016 SDY_4532 93f682dc56900629d70acf47473a6500 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SDY_4532 93f682dc56900629d70acf47473a6500 122 PANTHER PTHR34299:SF1 1 122 1.9E-42 T 21-04-2016 SDY_4532 93f682dc56900629d70acf47473a6500 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.2E-35 T 21-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SDY_4532 93f682dc56900629d70acf47473a6500 122 PANTHER PTHR34299 1 122 1.9E-42 T 21-04-2016 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 SUPERFAMILY SSF46689 213 258 1.97E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 Pfam PF02311 AraC-like ligand binding domain 22 97 4.9E-5 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 SMART SM00342 173 256 3.7E-20 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 Gene3D G3DSA:2.60.120.10 32 93 1.0E-8 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 SUPERFAMILY SSF51182 22 182 4.09E-13 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 Gene3D G3DSA:1.10.10.60 222 255 2.2E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 Pfam PF12833 Helix-turn-helix domain 180 256 1.7E-17 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 Gene3D G3DSA:1.10.10.60 155 212 8.4E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 PANTHER PTHR11019 4 264 1.9E-164 T 21-04-2016 SDY_1688 04fbbe2e56345eaf4f0a75d2a3f148f1 273 PANTHER PTHR11019:SF66 4 264 1.9E-164 T 21-04-2016 SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 Gene3D G3DSA:3.40.50.10540 9 216 1.0E-76 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 Gene3D G3DSA:3.40.50.10540 311 401 1.0E-76 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 SUPERFAMILY SSF89796 5 401 2.35E-100 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 1 405 99.815 T 21-04-2016 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 UniPathway: UPA00117 SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 Pfam PF02515 CoA-transferase family III 12 378 9.5E-95 T 21-04-2016 IPR003673 CoA-transferase family III GO:0003824 SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 Gene3D G3DSA:3.30.1540.10 228 310 1.4E-5 T 21-04-2016 SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 PANTHER PTHR24023:SF593 15 207 5.1E-12 T 21-04-2016 SDY_0060 f58b10b281a3e46c2385ab0a51078b61 405 PANTHER PTHR24023 15 207 5.1E-12 T 21-04-2016 SDY_1060 85c095c7dca4b8818a2523fc2794cd85 218 PIRSF PIRSF011491 1 218 4.1E-99 T 21-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted SDY_1060 85c095c7dca4b8818a2523fc2794cd85 218 Pfam PF08242 Methyltransferase domain 54 151 5.3E-7 T 21-04-2016 IPR013217 Methyltransferase type 12 SDY_1060 85c095c7dca4b8818a2523fc2794cd85 218 SUPERFAMILY SSF53335 7 193 9.24E-16 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1060 85c095c7dca4b8818a2523fc2794cd85 218 Gene3D G3DSA:3.40.50.150 50 175 3.8E-10 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 85 1.5E-25 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 PANTHER PTHR30505 1 113 7.8E-90 T 21-04-2016 SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 Gene3D G3DSA:3.40.50.2300 3 99 8.8E-32 T 21-04-2016 SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.0E-13 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 SUPERFAMILY SSF52794 4 98 1.74E-27 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3788 e8848b24a5b3e0d8d79dda4b74fd02e5 113 PANTHER PTHR30505:SF7 1 113 7.8E-90 T 21-04-2016 SDY_1982 585b24b6067071f016544f8cd822da52 166 PANTHER PTHR30462:SF1 1 161 2.4E-87 T 21-04-2016 SDY_1982 585b24b6067071f016544f8cd822da52 166 Pfam PF04403 Paraquat-inducible protein A 1 98 1.6E-26 T 21-04-2016 IPR007498 Paraquat-inducible protein A SDY_1982 585b24b6067071f016544f8cd822da52 166 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 161 1.1E-79 T 21-04-2016 IPR005219 Conserved hypothetical protein CHP00155 SDY_1982 585b24b6067071f016544f8cd822da52 166 PANTHER PTHR30462 1 161 2.4E-87 T 21-04-2016 SDY_1982 585b24b6067071f016544f8cd822da52 166 SUPERFAMILY SSF48695 94 136 3.07E-5 T 21-04-2016 IPR011031 Multihaem cytochrome SDY_2669 d0a863af2c08e2bba635085fb5147e18 156 SUPERFAMILY SSF52833 3 154 3.14E-50 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2669 d0a863af2c08e2bba635085fb5147e18 156 PANTHER PTHR10681 1 153 7.3E-51 T 21-04-2016 SDY_2669 d0a863af2c08e2bba635085fb5147e18 156 Gene3D G3DSA:3.40.30.10 2 155 2.8E-51 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2669 d0a863af2c08e2bba635085fb5147e18 156 PIRSF PIRSF000239 1 153 1.3E-17 T 21-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SDY_2669 d0a863af2c08e2bba635085fb5147e18 156 Pfam PF00578 AhpC/TSA family 7 134 4.4E-39 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 Gene3D G3DSA:3.30.70.1070 241 316 3.6E-32 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 SUPERFAMILY SSF110997 244 314 3.66E-20 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 319 34.534 T 21-04-2016 IPR011930 Cell division protein FtsN GO:0005515 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 315 1.0E-115 T 21-04-2016 IPR011930 Cell division protein FtsN GO:0005515 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 PANTHER PTHR11064 80 319 4.7E-120 T 21-04-2016 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 PANTHER PTHR11064:SF39 80 319 4.7E-120 T 21-04-2016 SDY_3804 fabea0f708446f32931e85633c80f9aa 319 Pfam PF05036 Sporulation related domain 246 313 1.3E-16 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 SUPERFAMILY SSF64288 53 232 7.54E-45 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 64 4.5E-21 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 Gene3D G3DSA:1.10.10.10 2 61 3.8E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PANTHER PTHR11751 3 68 6.5E-23 T 21-04-2016 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PANTHER PTHR11751 115 138 6.5E-23 T 21-04-2016 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 Gene3D G3DSA:3.40.1410.10 62 232 3.3E-48 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 SMART SM00345 6 65 3.6E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 SUPERFAMILY SSF46785 2 69 4.55E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PANTHER PTHR11751:SF381 3 68 6.5E-23 T 21-04-2016 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PANTHER PTHR11751:SF381 115 138 6.5E-23 T 21-04-2016 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 Pfam PF07702 UTRA domain 87 224 5.0E-30 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 SMART SM00866 86 225 1.9E-33 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.5E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_4170 fcc0eb97f3b7f64b10af74d7f79c97a2 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.5E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2454 0c46e291f40e4b5b5fcf740913b1ac3c 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.206 T 21-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 SDY_2454 0c46e291f40e4b5b5fcf740913b1ac3c 128 SUPERFAMILY SSF103481 42 124 1.15E-5 T 21-04-2016 SDY_1210 428476f76776efe280c6a6c7acde0733 133 Gene3D G3DSA:2.60.120.380 37 130 3.0E-5 T 21-04-2016 SDY_1210 428476f76776efe280c6a6c7acde0733 133 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 48 111 2.5E-7 T 21-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial SDY_3911 4e24ed50fd5a0a15ffa0ad2f60809d31 475 Pfam PF02646 RmuC family 136 432 2.0E-107 T 21-04-2016 IPR003798 DNA recombination RmuC SDY_3911 4e24ed50fd5a0a15ffa0ad2f60809d31 475 PANTHER PTHR30563 37 467 1.0E-147 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Gene3D G3DSA:1.20.5.100 55 96 3.8E-25 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 SUPERFAMILY SSF56601 412 777 6.01E-104 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0165 b46e3477cab627e00407e10e1e49f255 844 SUPERFAMILY SSF56601 362 384 6.01E-104 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0165 b46e3477cab627e00407e10e1e49f255 844 PIRSF PIRSF002799 37 843 0.0 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Gene3D G3DSA:3.40.710.10 382 798 1.2E-110 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Pfam PF00912 Transglycosylase 209 380 2.4E-54 T 21-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Gene3D G3DSA:3.30.2060.10 111 200 1.2E-33 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 SUPERFAMILY SSF53955 196 403 2.14E-65 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 79 1.8E-25 T 21-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain SDY_0165 b46e3477cab627e00407e10e1e49f255 844 PANTHER PTHR32282:SF11 185 828 0.0 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 68 795 0.0 T 21-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 715 8.1E-24 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Gene3D G3DSA:1.10.3810.10 205 381 7.2E-63 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 PANTHER PTHR32282 185 828 0.0 T 21-04-2016 SDY_0165 b46e3477cab627e00407e10e1e49f255 844 Pfam PF14814 Bifunctional transglycosylase second domain 113 197 3.8E-27 T 21-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_3173 e1600ee8de082787579fae95f4a330dc 441 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 129 1.0E-36 T 21-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SDY_3173 e1600ee8de082787579fae95f4a330dc 441 SUPERFAMILY SSF53092 4 177 3.92E-54 T 21-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SDY_3173 e1600ee8de082787579fae95f4a330dc 441 PANTHER PTHR10804:SF17 4 436 2.9E-167 T 21-04-2016 SDY_3173 e1600ee8de082787579fae95f4a330dc 441 PANTHER PTHR10804 4 436 2.9E-167 T 21-04-2016 SDY_3173 e1600ee8de082787579fae95f4a330dc 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 351 363 - T 21-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SDY_3173 e1600ee8de082787579fae95f4a330dc 441 SUPERFAMILY SSF55920 178 436 2.22E-89 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3173 e1600ee8de082787579fae95f4a330dc 441 SMART SM01011 4 139 5.2E-59 T 21-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SDY_3173 e1600ee8de082787579fae95f4a330dc 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 256 272 1.1E-5 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_3173 e1600ee8de082787579fae95f4a330dc 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 373 385 1.1E-5 T 21-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SDY_3173 e1600ee8de082787579fae95f4a330dc 441 Gene3D G3DSA:3.90.230.10 182 437 2.5E-90 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3173 e1600ee8de082787579fae95f4a330dc 441 Gene3D G3DSA:3.40.350.10 4 181 6.8E-56 T 21-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SDY_3173 e1600ee8de082787579fae95f4a330dc 441 Pfam PF00557 Metallopeptidase family M24 185 414 5.3E-66 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_2463 915d9cb61ed88c7628eaeef2e567f89c 153 Pfam PF13673 Acetyltransferase (GNAT) domain 44 149 2.0E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_2463 915d9cb61ed88c7628eaeef2e567f89c 153 PANTHER PTHR23091 1 152 5.9E-56 T 21-04-2016 SDY_2463 915d9cb61ed88c7628eaeef2e567f89c 153 PANTHER PTHR23091:SF275 1 152 5.9E-56 T 21-04-2016 SDY_2463 915d9cb61ed88c7628eaeef2e567f89c 153 SUPERFAMILY SSF55729 1 150 1.06E-33 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2463 915d9cb61ed88c7628eaeef2e567f89c 153 Gene3D G3DSA:3.40.630.30 2 148 7.0E-48 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1499 16475bf41f55be1e399a18b30ceba76d 199 PANTHER PTHR24064:SF293 1 198 1.3E-77 T 21-04-2016 SDY_1499 16475bf41f55be1e399a18b30ceba76d 199 Pfam PF07690 Major Facilitator Superfamily 30 192 9.2E-17 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1499 16475bf41f55be1e399a18b30ceba76d 199 SUPERFAMILY SSF103473 9 192 3.27E-29 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1499 16475bf41f55be1e399a18b30ceba76d 199 PANTHER PTHR24064 1 198 1.3E-77 T 21-04-2016 SDY_1499 16475bf41f55be1e399a18b30ceba76d 199 Gene3D G3DSA:1.20.1250.20 22 193 3.0E-19 T 21-04-2016 SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 Pfam PF02369 Bacterial Ig-like domain (group 1) 109 163 4.3E-10 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 Pfam PF02369 Bacterial Ig-like domain (group 1) 19 105 2.1E-24 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 Gene3D G3DSA:2.60.40.920 11 108 5.8E-24 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 Gene3D G3DSA:2.60.40.920 110 162 5.6E-9 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 SMART SM00634 114 177 0.094 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 SMART SM00634 16 104 2.6E-29 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 SUPERFAMILY SSF49373 9 107 2.94E-23 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_1077 d492ceafd90681cb33c033f4f8bafe2b 177 SUPERFAMILY SSF49373 107 161 1.0E-10 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_3943 a77f76b5f637555673b3e15d41850bc5 393 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 37 363 6.5E-136 T 21-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX SDY_3943 a77f76b5f637555673b3e15d41850bc5 393 PANTHER PTHR38043 1 376 3.2E-123 T 21-04-2016 SDY_0451 bc54172278741905cd4b02571125d3ec 125 PANTHER PTHR35813:SF1 1 125 2.5E-50 T 21-04-2016 SDY_0451 bc54172278741905cd4b02571125d3ec 125 PANTHER PTHR35813 1 125 2.5E-50 T 21-04-2016 SDY_0451 bc54172278741905cd4b02571125d3ec 125 PIRSF PIRSF016789 2 123 5.3E-51 T 21-04-2016 IPR007401 Protein of unknown function DUF454 SDY_0451 bc54172278741905cd4b02571125d3ec 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 4.3E-41 T 21-04-2016 IPR007401 Protein of unknown function DUF454 SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 PANTHER PTHR30163 1 361 4.1E-220 T 21-04-2016 IPR011757 Lytic transglycosylase MltB SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 113 166 1.1E-58 T 21-04-2016 SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 247 356 1.1E-58 T 21-04-2016 SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 SUPERFAMILY SSF53955 46 356 5.06E-103 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 PANTHER PTHR30163:SF0 1 361 4.1E-220 T 21-04-2016 SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 355 1.1E-130 T 21-04-2016 IPR011757 Lytic transglycosylase MltB SDY_2897 35aba7bb0c720b2d727bc9b18c712ebb 361 Pfam PF13406 Transglycosylase SLT domain 57 353 3.0E-92 T 21-04-2016 IPR031304 Transglycosylase SLT domain 2 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 PANTHER PTHR18966:SF189 8 264 1.1E-175 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 SMART SM00062 42 263 6.0E-88 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 SMART SM00079 42 262 4.7E-5 T 21-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 PANTHER PTHR18966 8 264 1.1E-175 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 Gene3D G3DSA:3.40.190.10 38 119 9.2E-47 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 Gene3D G3DSA:3.40.190.10 223 265 9.2E-47 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 Gene3D G3DSA:3.40.190.10 120 222 3.3E-33 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 SUPERFAMILY SSF53850 15 264 1.19E-76 T 21-04-2016 SDY_1097 a8ca7b33d60aed38d1cee5d293c87562 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.4E-71 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Gene3D G3DSA:3.40.1190.10 105 342 5.4E-82 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 PANTHER PTHR23135:SF4 9 491 1.5E-232 T 21-04-2016 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Gene3D G3DSA:3.90.190.20 343 484 2.3E-59 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 1.1E-11 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Gene3D G3DSA:3.40.1390.10 4 103 1.4E-33 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 SUPERFAMILY SSF53244 339 491 7.78E-52 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.5E-25 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.908 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 SUPERFAMILY SSF63418 5 103 1.1E-22 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 PANTHER PTHR23135 9 491 1.5E-232 T 21-04-2016 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 2.5E-165 T 21-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 SUPERFAMILY SSF53623 105 338 1.24E-79 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0115 af99821296d0a56468e4d4c660bdb9ac 495 Pfam PF08245 Mur ligase middle domain 114 317 6.7E-51 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_3832 cc4174eee4938d92c203544008c7e362 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 67.259 T 21-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 SDY_3832 cc4174eee4938d92c203544008c7e362 300 Gene3D G3DSA:1.20.1510.10 11 206 4.3E-45 T 21-04-2016 IPR027469 Cation efflux protein transmembrane domain SDY_3832 cc4174eee4938d92c203544008c7e362 300 Gene3D G3DSA:3.30.70.1350 207 288 3.2E-32 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SDY_3832 cc4174eee4938d92c203544008c7e362 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.0E-26 T 21-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SDY_3832 cc4174eee4938d92c203544008c7e362 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 2.4E-80 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_3832 cc4174eee4938d92c203544008c7e362 300 SUPERFAMILY SSF161111 8 207 1.57E-51 T 21-04-2016 SDY_3832 cc4174eee4938d92c203544008c7e362 300 Pfam PF01545 Cation efflux family 14 206 1.9E-44 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_3832 cc4174eee4938d92c203544008c7e362 300 PANTHER PTHR11562:SF55 1 296 1.6E-126 T 21-04-2016 SDY_3832 cc4174eee4938d92c203544008c7e362 300 SUPERFAMILY SSF160240 209 288 8.37E-26 T 21-04-2016 SDY_3832 cc4174eee4938d92c203544008c7e362 300 PANTHER PTHR11562 1 296 1.6E-126 T 21-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Pfam PF08245 Mur ligase middle domain 108 291 2.6E-18 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 PANTHER PTHR23135:SF17 1 449 0.0 T 21-04-2016 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Gene3D G3DSA:3.40.50.720 1 90 5.7E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 SUPERFAMILY SSF51984 1 90 1.31E-24 T 21-04-2016 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.7E-20 T 21-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 SUPERFAMILY SSF53244 312 447 9.81E-37 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 SUPERFAMILY SSF53623 95 308 1.44E-48 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.2E-275 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 361 7.2E-10 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.493 T 21-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Gene3D G3DSA:3.40.1190.10 92 312 2.9E-83 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 PANTHER PTHR23135 1 449 0.0 T 21-04-2016 SDY_4251 ec54dbf86c8db1c4ea6efee9690e9656 457 Gene3D G3DSA:3.90.190.20 313 449 3.4E-37 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 5.9E-104 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.815 T 21-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 PANTHER PTHR11670:SF27 1 201 2.2E-122 T 21-04-2016 SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 SUPERFAMILY SSF52016 4 195 3.34E-60 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 Pfam PF00694 Aconitase C-terminal domain 3 126 5.1E-40 T 21-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 Gene3D G3DSA:3.20.19.10 6 196 1.3E-48 T 21-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SDY_0098 e21185c2e91c4f2bd7b6502947c6a637 201 PANTHER PTHR11670 1 201 2.2E-122 T 21-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 2.9E-18 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 Gene3D G3DSA:3.40.50.620 1 157 1.6E-57 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-53 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-53 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-53 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-53 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-53 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.001 T 21-04-2016 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 SUPERFAMILY SSF52374 3 156 5.63E-47 T 21-04-2016 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.2E-62 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 Pfam PF01467 Cytidylyltransferase-like 6 134 6.6E-23 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PANTHER PTHR21342:SF1 1 159 2.3E-87 T 21-04-2016 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 37.153 T 21-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SDY_4064 baee7992afaebc628db6ba9d741d85b8 159 PANTHER PTHR21342 1 159 2.3E-87 T 21-04-2016 SDY_4304 f57473da79b7a2ec4008ceb28f0fc32d 457 PANTHER PTHR37957 159 315 2.6E-12 T 21-04-2016 SDY_4304 f57473da79b7a2ec4008ceb28f0fc32d 457 Pfam PF13449 Esterase-like activity of phytase 58 396 1.4E-49 T 21-04-2016 IPR027372 Phytase-like domain SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 PANTHER PTHR11260 34 276 7.5E-183 T 21-04-2016 SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 Gene3D G3DSA:1.20.1050.10 147 270 1.5E-43 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 Pfam PF02798 Glutathione S-transferase, N-terminal domain 77 143 1.1E-5 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 PANTHER PTHR11260:SF258 34 276 7.5E-183 T 21-04-2016 SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 Gene3D G3DSA:3.40.30.10 49 146 5.0E-27 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 SUPERFAMILY SSF47616 149 295 1.38E-32 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 260 2.4E-9 T 21-04-2016 SDY_3084 ac5f1eee8b94da58dc2a0b1b08ca7b55 304 SUPERFAMILY SSF52833 53 146 7.31E-17 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2338 94c274e5fd86769044d498c12242e595 259 Gene3D G3DSA:3.40.50.620 74 210 1.6E-17 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2338 94c274e5fd86769044d498c12242e595 259 PANTHER PTHR30336 1 259 2.8E-85 T 21-04-2016 SDY_2338 94c274e5fd86769044d498c12242e595 259 Pfam PF02698 DUF218 domain 80 213 3.7E-28 T 21-04-2016 IPR003848 Domain of unknown function DUF218 SDY_2338 94c274e5fd86769044d498c12242e595 259 PANTHER PTHR30336:SF1 1 259 2.8E-85 T 21-04-2016 SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.8E-61 T 21-04-2016 IPR007432 Protein of unknown function DUF480 SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 33.587 T 21-04-2016 IPR007432 Protein of unknown function DUF480 SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 PANTHER PTHR38768 1 215 1.5E-92 T 21-04-2016 SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 SUPERFAMILY SSF46785 2 84 1.36E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 SUPERFAMILY SSF46785 90 172 5.1E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 Gene3D G3DSA:1.10.10.10 95 172 7.8E-36 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 Gene3D G3DSA:1.10.10.10 3 87 4.6E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2085 0e7483bd7e5a237ce307ff161dc1e945 215 PANTHER PTHR38768:SF1 1 215 1.5E-92 T 21-04-2016 SDY_0737 5c8582d7e6f35166b358ca79e5b5c576 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 3.7E-63 T 21-04-2016 IPR019703 Protein of unknown function DUF2593 SDY_0503 498417a4d78dfee60ab5fea370aa6ed5 275 PANTHER PTHR30151:SF0 6 275 9.4E-124 T 21-04-2016 SDY_0503 498417a4d78dfee60ab5fea370aa6ed5 275 Gene3D G3DSA:1.10.3720.10 71 269 7.3E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0503 498417a4d78dfee60ab5fea370aa6ed5 275 SUPERFAMILY SSF161098 75 258 6.41E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0503 498417a4d78dfee60ab5fea370aa6ed5 275 PANTHER PTHR30151 6 275 9.4E-124 T 21-04-2016 SDY_0503 498417a4d78dfee60ab5fea370aa6ed5 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 3.8E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2415 1bd0e23270abbd1d8ecebb5670b19738 225 Pfam PF10548 P22AR C-terminal domain 125 197 6.2E-27 T 21-04-2016 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal SDY_2415 1bd0e23270abbd1d8ecebb5670b19738 225 Pfam PF10543 ORF6N domain 13 96 5.0E-16 T 21-04-2016 IPR018873 KilA-N, DNA-binding domain SDY_3908 6e9a9329195f38a369342462144b9103 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 1.9E-187 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SDY_3908 6e9a9329195f38a369342462144b9103 546 PANTHER PTHR10566:SF79 1 461 0.0 T 21-04-2016 SDY_3908 6e9a9329195f38a369342462144b9103 546 Pfam PF03109 ABC1 family 116 232 1.2E-34 T 21-04-2016 IPR004147 UbiB domain SDY_3908 6e9a9329195f38a369342462144b9103 546 PANTHER PTHR10566 1 461 0.0 T 21-04-2016 SDY_3908 6e9a9329195f38a369342462144b9103 546 Gene3D G3DSA:3.30.200.20 127 157 4.8E-4 T 21-04-2016 SDY_3908 6e9a9329195f38a369342462144b9103 546 Gene3D G3DSA:3.30.200.20 193 228 4.8E-4 T 21-04-2016 SDY_3908 6e9a9329195f38a369342462144b9103 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.841 T 21-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 SDY_3908 6e9a9329195f38a369342462144b9103 546 SUPERFAMILY SSF56112 94 159 2.56E-49 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_3908 6e9a9329195f38a369342462144b9103 546 SUPERFAMILY SSF56112 194 438 2.56E-49 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_2108 06b41218393f3c8f3d0bb7ac2afb4d4b 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 1.3E-171 T 21-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 SDY_2108 06b41218393f3c8f3d0bb7ac2afb4d4b 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 4.8E-118 T 21-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SDY_2108 06b41218393f3c8f3d0bb7ac2afb4d4b 349 PANTHER PTHR30106 2 349 5.4E-160 T 21-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SDY_2108 06b41218393f3c8f3d0bb7ac2afb4d4b 349 PANTHER PTHR30106:SF2 2 349 5.4E-160 T 21-04-2016 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 5.5E-11 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 PANTHER PTHR18901 1 221 1.3E-56 T 21-04-2016 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 SUPERFAMILY SSF56784 4 193 2.0E-42 T 21-04-2016 IPR023214 HAD-like domain SDY_4198 23288cb7822ee982822c272472e3cfdc 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 9.3E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 9.3E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 9.3E-5 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4198 23288cb7822ee982822c272472e3cfdc 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 2.8E-21 T 21-04-2016 IPR023214 HAD-like domain SDY_4198 23288cb7822ee982822c272472e3cfdc 221 Gene3D G3DSA:3.40.50.1000 2 19 5.6E-31 T 21-04-2016 IPR023214 HAD-like domain SDY_4198 23288cb7822ee982822c272472e3cfdc 221 Gene3D G3DSA:3.40.50.1000 88 197 5.6E-31 T 21-04-2016 IPR023214 HAD-like domain SDY_4198 23288cb7822ee982822c272472e3cfdc 221 PANTHER PTHR18901:SF2 1 221 1.3E-56 T 21-04-2016 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 Gene3D G3DSA:2.50.20.10 14 206 8.0E-71 T 21-04-2016 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 1.4E-49 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 PANTHER PTHR30634:SF11 1 207 1.4E-70 T 21-04-2016 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 206 1.5E-99 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 SUPERFAMILY SSF89392 31 206 6.28E-57 T 21-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SDY_1258 b3d72035f71ca3396519e93df17568f6 207 PANTHER PTHR30634 1 207 1.4E-70 T 21-04-2016 SDY_1258 b3d72035f71ca3396519e93df17568f6 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.745 T 21-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 SDY_0125 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SDY_0125 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF52490 12 207 1.7E-69 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 21-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SDY_0125 c16a16e243d432912840fefd5939be2e 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 3.8E-37 T 21-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SDY_0125 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.52E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.52E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.52E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.52E-52 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 PANTHER PTHR30314 1 381 1.5E-207 T 21-04-2016 SDY_0125 c16a16e243d432912840fefd5939be2e 383 PANTHER PTHR30314:SF3 1 381 1.5E-207 T 21-04-2016 SDY_0125 c16a16e243d432912840fefd5939be2e 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-42 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 SMART SM00865 206 324 3.4E-56 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SDY_0125 c16a16e243d432912840fefd5939be2e 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.188 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SDY_0125 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 21-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SDY_0125 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.30.1330.20 214 321 4.3E-47 T 21-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SDY_0125 c16a16e243d432912840fefd5939be2e 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 4.5E-142 T 21-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SDY_0125 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.40.50.1440 13 213 2.5E-93 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_0125 c16a16e243d432912840fefd5939be2e 383 SMART SM00864 12 204 3.3E-111 T 21-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SDY_2878 74004031f1307930979c5181cd39f532 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 2.1E-14 T 21-04-2016 IPR008407 Branched-chain amino acid transport, AzlD SDY_0867 dce04bab5d3cf94dd92c5afeb58dc6cc 258 Pfam PF13276 HTH-like domain 5 47 4.3E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0867 dce04bab5d3cf94dd92c5afeb58dc6cc 258 SUPERFAMILY SSF53098 65 229 1.67E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0867 dce04bab5d3cf94dd92c5afeb58dc6cc 258 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_0867 dce04bab5d3cf94dd92c5afeb58dc6cc 258 Gene3D G3DSA:3.30.420.10 66 226 1.2E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0867 dce04bab5d3cf94dd92c5afeb58dc6cc 258 Pfam PF00665 Integrase core domain 72 186 2.5E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 PIRSF PIRSF016183 9 181 2.8E-71 T 21-04-2016 IPR006839 Ribosome-associated, YjgA SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 Pfam PF04751 Protein of unknown function (DUF615) 24 174 1.6E-54 T 21-04-2016 IPR006839 Ribosome-associated, YjgA SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 14 178 23.707 T 21-04-2016 IPR006839 Ribosome-associated, YjgA SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 Gene3D G3DSA:1.10.60.30 110 180 1.2E-32 T 21-04-2016 IPR023153 PSPTO4464-like domain SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 Gene3D G3DSA:1.10.60.30 35 108 5.3E-29 T 21-04-2016 IPR023153 PSPTO4464-like domain SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 PANTHER PTHR38101:SF1 4 181 1.6E-87 T 21-04-2016 SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 SUPERFAMILY SSF158710 35 177 2.88E-51 T 21-04-2016 SDY_4252 08ea524c8772990cc9dfd42e15599bb8 181 PANTHER PTHR38101 4 181 1.6E-87 T 21-04-2016 SDY_4295 544f8f55ef14ba694ca9c547bac5d769 331 Gene3D G3DSA:1.10.3470.10 5 330 1.4E-93 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_4295 544f8f55ef14ba694ca9c547bac5d769 331 Pfam PF01032 FecCD transport family 18 329 1.6E-85 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_4295 544f8f55ef14ba694ca9c547bac5d769 331 SUPERFAMILY SSF81345 7 330 3.14E-75 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_4295 544f8f55ef14ba694ca9c547bac5d769 331 PANTHER PTHR30472 4 331 8.9E-135 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_4295 544f8f55ef14ba694ca9c547bac5d769 331 PANTHER PTHR30472:SF1 4 331 8.9E-135 T 21-04-2016 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 Pfam PF12404 Peptidase 5 81 3.8E-33 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.3E-46 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.3E-46 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.3E-46 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.3E-46 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.3E-46 T 21-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 Gene3D G3DSA:3.40.630.10 98 426 4.8E-117 T 21-04-2016 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 SUPERFAMILY SSF53187 108 426 4.08E-103 T 21-04-2016 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PANTHER PTHR11963:SF20 43 427 9.8E-271 T 21-04-2016 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PIRSF PIRSF036388 1 427 3.8E-238 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.8E-100 T 21-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 PANTHER PTHR11963 43 427 9.8E-271 T 21-04-2016 SDY_2719 324742986d358e9bfb6f7de8a6a6dcf5 427 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.394 T 21-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.097 T 21-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.03E-22 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.03E-22 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.03E-22 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 PANTHER PTHR33280:SF2 1 66 1.1E-37 T 21-04-2016 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 Pfam PF01197 Ribosomal protein L31 1 65 6.2E-31 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 PANTHER PTHR33280 1 66 1.1E-37 T 21-04-2016 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 SUPERFAMILY SSF143800 1 66 1.02E-27 T 21-04-2016 SDY_3801 091bb03c9d1e8734ac0da1ad6ed169e2 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 6.9E-35 T 21-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2236 76f279b88fd4d3b319ec18d3632e9790 352 PANTHER PTHR30509:SF5 1 351 2.0E-281 T 21-04-2016 SDY_2236 76f279b88fd4d3b319ec18d3632e9790 352 Pfam PF04632 Fusaric acid resistance protein family 21 320 1.8E-18 T 21-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 SDY_2236 76f279b88fd4d3b319ec18d3632e9790 352 PANTHER PTHR30509 1 351 2.0E-281 T 21-04-2016 SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 Pfam PF01965 DJ-1/PfpI family 6 172 2.3E-47 T 21-04-2016 IPR002818 DJ-1/PfpI SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 7 185 3.0E-65 T 21-04-2016 IPR006287 DJ-1 SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 PANTHER PTHR11019:SF4 3 196 1.3E-73 T 21-04-2016 SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 Gene3D G3DSA:3.40.50.880 6 190 2.4E-57 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 SUPERFAMILY SSF52317 7 190 1.29E-46 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_0306 a0fb327680f4ccf6d9d058c970d6d5a1 198 PANTHER PTHR11019 3 196 1.3E-73 T 21-04-2016 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 PANTHER PTHR20854 1 243 7.4E-88 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 Pfam PF00459 Inositol monophosphatase family 5 233 4.5E-49 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.30.540.10 1 147 4.3E-45 T 21-04-2016 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 SUPERFAMILY SSF56655 1 243 2.36E-76 T 21-04-2016 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 21-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 PANTHER PTHR20854:SF5 1 243 7.4E-88 T 21-04-2016 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 5.1E-114 T 21-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.40.190.80 148 243 1.5E-41 T 21-04-2016 SDY_4385 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 21-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SDY_0478 c0a7ed2505c010d7b77cc5702032380f 414 Gene3D G3DSA:3.40.50.1820 346 412 1.7E-26 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0478 c0a7ed2505c010d7b77cc5702032380f 414 Gene3D G3DSA:3.40.50.1820 157 301 1.7E-26 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0478 c0a7ed2505c010d7b77cc5702032380f 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 64.633 T 21-04-2016 IPR010520 UPF0255 family SDY_0478 c0a7ed2505c010d7b77cc5702032380f 414 SUPERFAMILY SSF53474 46 413 8.17E-54 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0478 c0a7ed2505c010d7b77cc5702032380f 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 4.4E-220 T 21-04-2016 IPR010520 UPF0255 family SDY_0304 d0a7584344a890442bd5084063986e04 163 Gene3D G3DSA:3.30.70.860 98 163 1.2E-35 T 21-04-2016 SDY_0304 d0a7584344a890442bd5084063986e04 163 Gene3D G3DSA:3.30.70.990 9 97 9.5E-37 T 21-04-2016 SDY_0304 d0a7584344a890442bd5084063986e04 163 SUPERFAMILY SSF89963 91 163 1.99E-29 T 21-04-2016 IPR007551 Protein of unknown function DUF520 SDY_0304 d0a7584344a890442bd5084063986e04 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.408 T 21-04-2016 IPR007551 Protein of unknown function DUF520 SDY_0304 d0a7584344a890442bd5084063986e04 163 SUPERFAMILY SSF89963 2 89 3.14E-30 T 21-04-2016 IPR007551 Protein of unknown function DUF520 SDY_0304 d0a7584344a890442bd5084063986e04 163 PANTHER PTHR30476 1 163 4.8E-95 T 21-04-2016 SDY_0304 d0a7584344a890442bd5084063986e04 163 PANTHER PTHR30476:SF0 1 163 4.8E-95 T 21-04-2016 SDY_0304 d0a7584344a890442bd5084063986e04 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 2.1E-65 T 21-04-2016 IPR007551 Protein of unknown function DUF520 SDY_4333 b85d3a2ade92b582ee653d0173955ae3 147 Pfam PF13673 Acetyltransferase (GNAT) domain 40 131 2.9E-15 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_4333 b85d3a2ade92b582ee653d0173955ae3 147 PANTHER PTHR23091:SF277 1 129 9.5E-56 T 21-04-2016 SDY_4333 b85d3a2ade92b582ee653d0173955ae3 147 SUPERFAMILY SSF55729 3 139 1.01E-25 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4333 b85d3a2ade92b582ee653d0173955ae3 147 Gene3D G3DSA:3.40.630.30 1 141 3.0E-27 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4333 b85d3a2ade92b582ee653d0173955ae3 147 PANTHER PTHR23091 1 129 9.5E-56 T 21-04-2016 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 SUPERFAMILY SSF48008 95 234 3.4E-20 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 SMART SM00345 15 74 3.0E-29 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 SMART SM00895 99 227 9.2E-17 T 21-04-2016 IPR011711 GntR, C-terminal SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PANTHER PTHR11751:SF355 93 115 3.0E-51 T 21-04-2016 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PANTHER PTHR11751:SF355 1 77 3.0E-51 T 21-04-2016 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 Gene3D G3DSA:1.20.120.530 97 238 4.7E-18 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 Pfam PF07729 FCD domain 99 226 2.4E-17 T 21-04-2016 IPR011711 GntR, C-terminal SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 SUPERFAMILY SSF46785 6 76 4.2E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PANTHER PTHR11751 93 115 3.0E-51 T 21-04-2016 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 PANTHER PTHR11751 1 77 3.0E-51 T 21-04-2016 SDY_0143 c9194a9de6c9cdc4be298fbcb7843dea 254 Gene3D G3DSA:1.10.10.10 7 76 2.4E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 1.7E-198 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 Pfam PF06965 Na+/H+ antiporter 1 6 380 1.9E-151 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 PANTHER PTHR30341 2 385 2.1E-212 T 21-04-2016 SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 Gene3D G3DSA:1.20.1530.10 2 385 2.3E-160 T 21-04-2016 IPR023171 Na/H antiporter domain SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 23.943 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SDY_0018 2ab11ad0e97798051ba19c8d6bee7945 388 PANTHER PTHR30341:SF0 2 385 2.1E-212 T 21-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 26 290 3.9E-74 T 21-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 PANTHER PTHR35092:SF2 21 300 2.5E-112 T 21-04-2016 SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 PIRSF PIRSF006779 20 296 2.3E-105 T 21-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 Gene3D G3DSA:2.40.30.90 186 294 4.0E-29 T 21-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 SUPERFAMILY SSF102522 23 179 1.44E-56 T 21-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 PANTHER PTHR35092 21 300 2.5E-112 T 21-04-2016 SDY_3931 347a422d7925fe2bbcf45a7175547d98 300 SUPERFAMILY SSF101852 189 293 2.48E-25 T 21-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 PANTHER PTHR10584 1 213 4.3E-52 T 21-04-2016 SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 Gene3D G3DSA:3.40.1190.20 1 211 2.8E-48 T 21-04-2016 IPR029056 Ribokinase-like SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 153 166 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 Pfam PF00294 pfkB family carbohydrate kinase 1 199 2.6E-46 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 PANTHER PTHR10584:SF184 1 213 4.3E-52 T 21-04-2016 SDY_1495 d72cdaa9ce4f66e636ea81a86a957ecd 214 SUPERFAMILY SSF53613 2 199 4.68E-47 T 21-04-2016 IPR029056 Ribokinase-like SDY_4750 b2340485774780b5b5950929b2d117ee 90 PANTHER PTHR33293:SF2 1 89 2.2E-20 T 21-04-2016 SDY_4750 b2340485774780b5b5950929b2d117ee 90 Pfam PF12759 InsA C-terminal domain 42 87 9.6E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4750 b2340485774780b5b5950929b2d117ee 90 PANTHER PTHR33293 1 89 2.2E-20 T 21-04-2016 SDY_4750 b2340485774780b5b5950929b2d117ee 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4299 617580f6ceba12e767293b595ad8f952 173 Pfam PF04542 Sigma-70 region 2 16 81 4.6E-12 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 SUPERFAMILY SSF88946 12 78 1.69E-13 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 SUPERFAMILY SSF88659 88 164 1.64E-13 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 8.8E-21 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 Gene3D G3DSA:1.10.1740.10 13 106 4.8E-12 T 21-04-2016 SDY_4299 617580f6ceba12e767293b595ad8f952 173 PANTHER PTHR30173 13 164 1.2E-38 T 21-04-2016 SDY_4299 617580f6ceba12e767293b595ad8f952 173 Gene3D G3DSA:1.10.10.10 109 164 7.0E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4299 617580f6ceba12e767293b595ad8f952 173 Pfam PF08281 Sigma-70, region 4 112 164 1.2E-13 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_4299 617580f6ceba12e767293b595ad8f952 173 PANTHER PTHR30173:SF9 13 164 1.2E-38 T 21-04-2016 SDY_0181 4ddf5054a88b91559aee6478ea4a0b69 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.9E-57 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 SDY_0181 4ddf5054a88b91559aee6478ea4a0b69 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.845 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 SDY_0181 4ddf5054a88b91559aee6478ea4a0b69 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 21-04-2016 IPR020911 Uncharacterised protein family UPF0325 SDY_2421 92f9af9d6ddc07f8f41fc90559d48b7a 186 Gene3D G3DSA:3.90.1720.10 43 164 9.5E-7 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_2421 92f9af9d6ddc07f8f41fc90559d48b7a 186 Pfam PF06672 Protein of unknown function (DUF1175) 20 183 1.1E-61 T 21-04-2016 IPR009558 Protein of unknown function DUF1175 SDY_2086 0a313d8d1137e2e60876628082c9cef3 194 SUPERFAMILY SSF55729 12 185 9.86E-42 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2086 0a313d8d1137e2e60876628082c9cef3 194 PANTHER PTHR13256 9 190 2.2E-89 T 21-04-2016 SDY_2086 0a313d8d1137e2e60876628082c9cef3 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 5.1E-19 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_2086 0a313d8d1137e2e60876628082c9cef3 194 PANTHER PTHR13256:SF24 9 190 2.2E-89 T 21-04-2016 SDY_2086 0a313d8d1137e2e60876628082c9cef3 194 Gene3D G3DSA:3.40.630.30 9 186 1.4E-45 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 Hamap MF_02022 Cell division protein DedD [dedD]. 10 219 24.497 T 21-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 Pfam PF05036 Sporulation related domain 141 214 4.5E-11 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 PANTHER PTHR38687:SF1 2 220 8.9E-69 T 21-04-2016 SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 PANTHER PTHR38687 2 220 8.9E-69 T 21-04-2016 SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 SUPERFAMILY SSF110997 140 217 1.96E-12 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_2513 0471c706932fcd0f948750f3de6f21e7 220 Gene3D G3DSA:3.30.70.1070 138 216 2.9E-13 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_1702 a40e5eda7a31415b34f80810d44a64e4 71 PANTHER PTHR30047 1 66 5.6E-12 T 21-04-2016 SDY_1702 a40e5eda7a31415b34f80810d44a64e4 71 PANTHER PTHR30047:SF5 1 66 5.6E-12 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 SUPERFAMILY SSF74653 153 222 1.57E-20 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 227 5.1E-18 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 4.1E-39 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 195 212 4.1E-39 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 176 194 4.1E-39 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 176 4.1E-39 T 21-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 Gene3D G3DSA:3.30.1150.10 130 233 7.9E-12 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PANTHER PTHR33446:SF1 1 239 1.9E-67 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 PANTHER PTHR33446 1 239 1.9E-67 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 Pfam PF16031 TonB N-terminal region 33 157 5.5E-36 T 21-04-2016 SDY_1316 2913d2f2a247d9393b1a9cc910d19fe3 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 233 1.1E-19 T 21-04-2016 IPR006260 TonB, C-terminal GO:0006810 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF51246 331 444 6.28E-44 T 21-04-2016 IPR011054 Rudiment single hybrid motif SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.40.50.20 1 129 9.4E-51 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.6E-38 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF56059 83 347 1.18E-68 T 21-04-2016 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.30.470.20 204 444 2.8E-100 T 21-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 PANTHER PTHR18866 1 442 0.0 T 21-04-2016 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.1E-86 T 21-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 SMART SM00878 336 441 4.2E-65 T 21-04-2016 IPR005482 Biotin carboxylase, C-terminal SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.1E-252 T 21-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.1E-44 T 21-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SDY_3433 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.30.1490.20 130 203 7.8E-30 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 Hamap MF_01192 Flap endonuclease Xni [xni]. 32 281 46.023 T 21-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 SMART SM00279 192 227 2.0E-11 T 21-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 SUPERFAMILY SSF47807 190 273 1.2E-23 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 Gene3D G3DSA:1.10.150.20 205 265 2.7E-25 T 21-04-2016 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 SMART SM00475 33 280 5.5E-110 T 21-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 35 176 4.5E-28 T 21-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 PANTHER PTHR10133:SF39 2 279 7.7E-182 T 21-04-2016 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 SUPERFAMILY SSF88723 34 189 4.91E-37 T 21-04-2016 IPR029060 PIN domain-like SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 Gene3D G3DSA:3.40.50.1010 34 204 5.7E-49 T 21-04-2016 IPR029060 PIN domain-like SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 PANTHER PTHR10133 2 279 7.7E-182 T 21-04-2016 SDY_3015 55c2962ed594ddff22f7f3bef21f9de6 281 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 190 279 4.9E-26 T 21-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 141 591 2.0E-195 T 21-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 Gene3D G3DSA:3.90.100.10 633 754 2.1E-31 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 PIRSF PIRSF009393 1 756 1.2E-273 T 21-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 SDY_4094 5aa52928282aa110adccbac583c31474 756 Gene3D G3DSA:3.90.1150.10 448 632 2.5E-69 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 382 396 - T 21-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 PANTHER PTHR11751 142 475 4.1E-136 T 21-04-2016 SDY_4094 5aa52928282aa110adccbac583c31474 756 PANTHER PTHR11751:SF353 142 475 4.1E-136 T 21-04-2016 SDY_4094 5aa52928282aa110adccbac583c31474 756 SUPERFAMILY SSF55904 611 755 6.41E-37 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 SUPERFAMILY SSF53383 141 608 1.49E-111 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4094 5aa52928282aa110adccbac583c31474 756 Gene3D G3DSA:3.40.640.10 141 444 9.1E-108 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 616 744 8.2E-44 T 21-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SDY_4094 5aa52928282aa110adccbac583c31474 756 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 135 4.6E-25 T 21-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 SDY_1570 1cce7895315094e820e381659658e936 115 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 38 93 7.0E-28 T 21-04-2016 IPR010595 Protein of unknown function DUF1161 SDY_1570 1cce7895315094e820e381659658e936 115 Pfam PF06649 Protein of unknown function (DUF1161) 40 93 4.5E-22 T 21-04-2016 IPR010595 Protein of unknown function DUF1161 SDY_3276 cc6e7ea6ff3af3761184724983654fd7 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 4.0E-154 T 21-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 SDY_3276 cc6e7ea6ff3af3761184724983654fd7 495 PANTHER PTHR30536:SF5 1 495 1.5E-282 T 21-04-2016 SDY_3276 cc6e7ea6ff3af3761184724983654fd7 495 Pfam PF08666 SAF domain 10 81 4.4E-15 T 21-04-2016 IPR013974 SAF domain SDY_3276 cc6e7ea6ff3af3761184724983654fd7 495 PANTHER PTHR30536 1 495 1.5E-282 T 21-04-2016 SDY_3276 cc6e7ea6ff3af3761184724983654fd7 495 SMART SM00858 10 81 2.1E-17 T 21-04-2016 IPR013974 SAF domain SDY_1475 202bfb0969605b061d9165326c699aa5 297 SUPERFAMILY SSF51735 116 292 4.93E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1475 202bfb0969605b061d9165326c699aa5 297 Gene3D G3DSA:3.40.50.720 121 293 4.5E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1475 202bfb0969605b061d9165326c699aa5 297 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 21 103 1.1E-26 T 21-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_1475 202bfb0969605b061d9165326c699aa5 297 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 16 295 30.245 T 21-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_1475 202bfb0969605b061d9165326c699aa5 297 SUPERFAMILY SSF53223 14 115 7.48E-30 T 21-04-2016 SDY_1475 202bfb0969605b061d9165326c699aa5 297 Gene3D G3DSA:3.40.192.10 15 120 7.8E-37 T 21-04-2016 SDY_1475 202bfb0969605b061d9165326c699aa5 297 PANTHER PTHR21089 14 293 1.9E-96 T 21-04-2016 SDY_1475 202bfb0969605b061d9165326c699aa5 297 Hamap MF_01578 Quinate/shikimate dehydrogenase [ydiB]. 10 297 80.706 T 21-04-2016 IPR022872 Quinate/Shikimate dehydrogenase GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114 KEGG: 00400+1.1.1.282|KEGG: 00620+1.1.1.28|MetaCyc: PWY-6163|MetaCyc: PWY-6454|MetaCyc: PWY-6901|UniPathway: UPA00053 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Gene3D G3DSA:3.40.190.10 181 221 4.3E-15 T 21-04-2016 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Gene3D G3DSA:3.40.190.10 6 83 4.3E-15 T 21-04-2016 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 264 292 - T 21-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 SMART SM00062 1 223 8.4E-51 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 SUPERFAMILY SSF53955 199 352 2.29E-34 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 SUPERFAMILY SSF53955 387 395 2.29E-34 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 SUPERFAMILY SSF53850 6 222 1.92E-34 T 21-04-2016 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 1 427 43.802 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 PANTHER PTHR21666:SF215 228 451 3.6E-151 T 21-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Pfam PF01464 Transglycosylase SLT domain 251 356 4.7E-22 T 21-04-2016 IPR008258 Transglycosylase SLT domain 1 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 6 222 1.6E-30 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 PANTHER PTHR21666 228 451 3.6E-151 T 21-04-2016 SDY_2748 e91b3e494ca9677f7847c6e9946cf972 472 Gene3D G3DSA:1.10.530.10 242 417 4.3E-36 T 21-04-2016 SDY_1130 31064f5e770b03f25ececcfcbfe7f608 220 SMART SM00479 1 156 7.0E-40 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_1130 31064f5e770b03f25ececcfcbfe7f608 220 SUPERFAMILY SSF53098 4 183 1.87E-34 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1130 31064f5e770b03f25ececcfcbfe7f608 220 PANTHER PTHR30231 4 210 6.4E-49 T 21-04-2016 SDY_1130 31064f5e770b03f25ececcfcbfe7f608 220 Gene3D G3DSA:3.30.420.10 4 152 4.3E-38 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1130 31064f5e770b03f25ececcfcbfe7f608 220 Pfam PF00929 Exonuclease 4 147 1.7E-14 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 SUPERFAMILY SSF56784 1 218 1.21E-40 T 21-04-2016 IPR023214 HAD-like domain SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 PANTHER PTHR10000 1 218 2.1E-158 T 21-04-2016 SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 Gene3D G3DSA:3.30.1240.10 85 183 1.0E-33 T 21-04-2016 SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 218 5.3E-43 T 21-04-2016 IPR000150 Cof protein GO:0016787 SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 Gene3D G3DSA:3.40.50.1000 3 84 1.2E-26 T 21-04-2016 IPR023214 HAD-like domain SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 Gene3D G3DSA:3.40.50.1000 184 218 1.2E-26 T 21-04-2016 IPR023214 HAD-like domain SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 PANTHER PTHR10000:SF22 1 218 2.1E-158 T 21-04-2016 SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 218 6.3E-13 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SDY_0765 dc41ebbcb29dbd6b9325f11b20247566 218 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 218 2.0E-31 T 21-04-2016 IPR023214 HAD-like domain SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 SMART SM00100 2 120 9.9E-17 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 PANTHER PTHR24567 8 218 2.0E-98 T 21-04-2016 SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 PANTHER PTHR24567:SF26 8 218 2.0E-98 T 21-04-2016 SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 SUPERFAMILY SSF51206 6 125 8.12E-20 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 Pfam PF00027 Cyclic nucleotide-binding domain 22 105 5.3E-12 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_2099 b44644dcf6d8841fca3df30401bf4582 219 Gene3D G3DSA:2.60.120.10 7 126 1.8E-18 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 SUPERFAMILY SSF55846 2 179 2.62E-68 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 SMART SM00644 16 166 1.2E-61 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 1.6E-19 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 PANTHER PTHR30417 1 180 1.0E-97 T 21-04-2016 SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 PANTHER PTHR30417:SF4 1 180 1.0E-97 T 21-04-2016 SDY_0140 d07a12538eb7e2a783000767ff7f08cc 183 Gene3D G3DSA:3.40.80.10 3 180 8.0E-71 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_3587 1a7429249c9ac80b169e1dfb5c75ff27 446 PIRSF PIRSF002746 1 446 4.0E-155 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3587 1a7429249c9ac80b169e1dfb5c75ff27 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 8.5E-180 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3587 1a7429249c9ac80b169e1dfb5c75ff27 446 Pfam PF02447 GntP family permease 5 441 1.4E-168 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3587 1a7429249c9ac80b169e1dfb5c75ff27 446 PANTHER PTHR30354:SF8 1 446 0.0 T 21-04-2016 SDY_3587 1a7429249c9ac80b169e1dfb5c75ff27 446 PANTHER PTHR30354 1 446 0.0 T 21-04-2016 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 SUPERFAMILY SSF103473 257 490 1.31E-29 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1857 3a7de091488a767be5d30857adfdadd0 500 SUPERFAMILY SSF103473 17 212 1.31E-29 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1857 3a7de091488a767be5d30857adfdadd0 500 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.517 T 21-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 PANTHER PTHR11654:SF99 5 500 1.3E-254 T 21-04-2016 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 PANTHER PTHR11654 5 500 1.3E-254 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 4.4E-138 T 21-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 Pfam PF00854 POT family 89 447 1.0E-93 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 Gene3D G3DSA:1.20.1250.20 274 488 3.0E-9 T 21-04-2016 SDY_1857 3a7de091488a767be5d30857adfdadd0 500 Gene3D G3DSA:1.20.1250.20 21 202 8.5E-18 T 21-04-2016 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 SUPERFAMILY SSF46955 2 121 2.53E-35 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 Gene3D G3DSA:1.10.1660.10 57 136 3.7E-34 T 21-04-2016 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.8E-62 T 21-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 PANTHER PTHR30204 1 123 1.9E-62 T 21-04-2016 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 6.8E-21 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.4E-12 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.4E-12 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.4E-12 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 SMART SM00422 2 71 2.1E-34 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 PANTHER PTHR30204:SF18 1 123 1.9E-62 T 21-04-2016 SDY_3468 e97ebe0750cea743d147d9f5f771bfc2 141 Gene3D G3DSA:1.10.1660.10 1 56 3.6E-28 T 21-04-2016 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 PIRSF PIRSF003196 3 108 1.3E-40 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.11 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 PANTHER PTHR38025 1 108 5.5E-46 T 21-04-2016 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 Pfam PF01371 Trp repressor protein 17 102 2.1E-28 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 SUPERFAMILY SSF48295 5 105 7.85E-30 T 21-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 104 7.1E-43 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-40 T 21-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 Gene3D G3DSA:1.10.1270.10 10 107 1.5E-46 T 21-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SDY_4654 1129ce31eceb1fd2c2e696746fb9ebd9 108 PANTHER PTHR38025:SF1 1 108 5.5E-46 T 21-04-2016 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 PANTHER PTHR30335:SF0 2 193 2.0E-134 T 21-04-2016 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.4E-92 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 PANTHER PTHR30335 2 193 2.0E-134 T 21-04-2016 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 PIRSF PIRSF006102 1 193 8.7E-60 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.541 T 21-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 SDY_1850 681c6b4ad29902edac090fcde2cc95c7 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.7E-60 T 21-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 21-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 SUPERFAMILY SSF55282 4 179 2.35E-79 T 21-04-2016 IPR022803 Ribosomal protein L5 domain SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 PIRSF PIRSF002161 1 179 1.5E-66 T 21-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 Gene3D G3DSA:3.30.1440.10 2 179 7.2E-81 T 21-04-2016 IPR022803 Ribosomal protein L5 domain SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.0E-41 T 21-04-2016 IPR031309 Ribosomal protein L5, C-terminal SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00281 Ribosomal protein L5 24 80 9.4E-29 T 21-04-2016 IPR031310 Ribosomal protein L5, N-terminal SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 21-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3484 1a6377b3ef5b5fc6796affa39279224a 179 PANTHER PTHR11994 1 178 1.2E-103 T 21-04-2016 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 PANTHER PTHR36966:SF1 1 105 2.4E-14 T 21-04-2016 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 PANTHER PTHR36966 1 105 2.4E-14 T 21-04-2016 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 Pfam PF01797 Transposase IS200 like 18 100 7.4E-5 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 SUPERFAMILY SSF143422 1 106 8.89E-24 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 SMART SM01321 9 105 1.1E-16 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_0254 f0c9c244c0e746d567ee962f2bd6f99f 112 Gene3D G3DSA:3.30.70.1290 14 101 1.0E-7 T 21-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SDY_2925 7d03db32baa353bf74d064d746359a3b 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.8E-33 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2925 7d03db32baa353bf74d064d746359a3b 90 Pfam PF01455 HupF/HypC family 1 71 3.2E-26 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PANTHER PTHR35177 2 90 6.6E-67 T 21-04-2016 SDY_2925 7d03db32baa353bf74d064d746359a3b 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 21-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PANTHER PTHR35177:SF1 2 90 6.6E-67 T 21-04-2016 SDY_2925 7d03db32baa353bf74d064d746359a3b 90 SUPERFAMILY SSF159127 1 86 1.96E-28 T 21-04-2016 SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 3.3E-23 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 3.3E-23 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 3.3E-23 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2925 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.3E-23 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 SUPERFAMILY SSF48695 48 145 2.26E-40 T 21-04-2016 IPR011031 Multihaem cytochrome SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 Gene3D G3DSA:4.10.1020.10 62 129 5.9E-33 T 21-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 6.3E-43 T 21-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 PANTHER PTHR38604 9 149 7.0E-71 T 21-04-2016 SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 PANTHER PTHR38604:SF1 9 149 7.0E-71 T 21-04-2016 SDY_0875 9d1429cfd78ac2955d69f6655c5d4eaa 149 PIRSF PIRSF006105 3 149 9.7E-55 T 21-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SDY_3702 ac759b0e0624a389e83c542ac3b79983 292 PANTHER PTHR10819 7 292 9.4E-117 T 21-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 SDY_3702 ac759b0e0624a389e83c542ac3b79983 292 SUPERFAMILY SSF51556 3 291 1.79E-97 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_3702 ac759b0e0624a389e83c542ac3b79983 292 PIRSF PIRSF016839 1 292 7.0E-134 T 21-04-2016 SDY_3702 ac759b0e0624a389e83c542ac3b79983 292 Pfam PF02126 Phosphotriesterase family 1 292 4.2E-141 T 21-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 SDY_3702 ac759b0e0624a389e83c542ac3b79983 292 Gene3D G3DSA:3.20.20.140 2 292 2.9E-112 T 21-04-2016 SDY_3847 b56cc59cf50bef3bc6ebf88222e500c0 205 Pfam PF12889 Protein of unknown function (DUF3829) 74 204 1.4E-45 T 21-04-2016 IPR024291 Protein of unknown function DUF3829 SDY_2829 389d9d548820568846ac9df1f575bc6a 98 PIRSF PIRSF034456 1 97 1.6E-56 T 21-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 SDY_2829 389d9d548820568846ac9df1f575bc6a 98 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 15 90 3.4E-10 T 21-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein SDY_2829 389d9d548820568846ac9df1f575bc6a 98 PANTHER PTHR35462 1 98 5.7E-66 T 21-04-2016 SDY_2829 389d9d548820568846ac9df1f575bc6a 98 PANTHER PTHR35462:SF1 1 98 5.7E-66 T 21-04-2016 SDY_1596 2277658d832a54435174c972fc1074fa 127 SMART SM00342 25 108 3.0E-31 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_1596 2277658d832a54435174c972fc1074fa 127 Gene3D G3DSA:1.10.10.60 8 62 6.1E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1596 2277658d832a54435174c972fc1074fa 127 Gene3D G3DSA:1.10.10.60 63 125 1.0E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1596 2277658d832a54435174c972fc1074fa 127 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_1596 2277658d832a54435174c972fc1074fa 127 PANTHER PTHR11019 7 116 4.2E-72 T 21-04-2016 SDY_1596 2277658d832a54435174c972fc1074fa 127 SUPERFAMILY SSF46689 62 111 4.08E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1596 2277658d832a54435174c972fc1074fa 127 SUPERFAMILY SSF46689 10 59 1.03E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1596 2277658d832a54435174c972fc1074fa 127 PANTHER PTHR11019:SF118 7 116 4.2E-72 T 21-04-2016 SDY_1596 2277658d832a54435174c972fc1074fa 127 Pfam PF12833 Helix-turn-helix domain 32 108 5.8E-18 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Pfam PF02540 NAD synthase 223 257 1.2E-6 T 21-04-2016 IPR022310 NAD/GMP synthase SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 SUPERFAMILY SSF52402 197 420 3.97E-59 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PANTHER PTHR11922 3 522 6.2E-295 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 9.2E-42 T 21-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Gene3D G3DSA:3.40.50.620 224 399 1.7E-58 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2703 2a9e1916326cde1831bab359232d2c87 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 1.3E-155 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.552 T 21-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 SUPERFAMILY SSF54810 405 525 3.27E-51 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.0E-44 T 21-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Gene3D G3DSA:3.30.300.10 401 525 2.4E-53 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PANTHER PTHR11922:SF2 3 522 6.2E-295 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 2.8E-85 T 21-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 SUPERFAMILY SSF52317 5 204 1.14E-58 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 21-04-2016 SDY_2703 2a9e1916326cde1831bab359232d2c87 525 Gene3D G3DSA:3.40.50.880 3 223 1.8E-61 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_0939 01f69ff97eb2baf3793e4041dd5e9dfe 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 1.5E-46 T 21-04-2016 IPR018635 Uncharacterised protein family UPF0319 SDY_0939 01f69ff97eb2baf3793e4041dd5e9dfe 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.771 T 21-04-2016 IPR018635 Uncharacterised protein family UPF0319 SDY_0939 01f69ff97eb2baf3793e4041dd5e9dfe 220 PANTHER PTHR38108:SF1 1 220 1.2E-81 T 21-04-2016 SDY_0939 01f69ff97eb2baf3793e4041dd5e9dfe 220 PANTHER PTHR38108 1 220 1.2E-81 T 21-04-2016 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 PANTHER PTHR30627:SF2 5 625 2.1E-277 T 21-04-2016 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 Gene3D G3DSA:3.40.710.10 253 612 9.2E-99 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 PANTHER PTHR30627 5 625 2.1E-277 T 21-04-2016 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 7.3E-240 T 21-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 SUPERFAMILY SSF56601 254 611 2.99E-91 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 8.4E-86 T 21-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 SUPERFAMILY SSF56519 56 253 1.31E-53 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 Gene3D G3DSA:3.90.1310.10 130 252 5.9E-41 T 21-04-2016 SDY_0557 1e28af9e01e35df27cf262f225b5c105 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 6.6E-46 T 21-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 Pfam PF07219 HemY protein N-terminus 26 132 6.4E-36 T 21-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 1.2E-116 T 21-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.7E-5 T 21-04-2016 IPR013105 Tetratricopeptide repeat 2 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 PANTHER PTHR23083 83 385 5.4E-56 T 21-04-2016 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 Gene3D G3DSA:1.25.40.10 83 203 1.1E-15 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 Gene3D G3DSA:1.25.40.10 328 383 1.1E-15 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 Gene3D G3DSA:1.25.40.10 265 296 1.1E-15 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 SUPERFAMILY SSF48452 95 226 2.45E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 SUPERFAMILY SSF48452 269 383 2.45E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3944 8ff8cbccf0a7a3f1f6f2e71cc03e53c6 398 PANTHER PTHR23083:SF396 83 385 5.4E-56 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Pfam PF01103 Surface antigen 448 810 8.6E-106 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 2.9E-286 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Gene3D G3DSA:2.40.160.50 708 807 6.9E-20 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Gene3D G3DSA:2.40.160.50 392 669 6.9E-20 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 PIRSF PIRSF006076 1 810 1.9E-259 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Pfam PF07244 Surface antigen variable number repeat 348 421 4.1E-13 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Pfam PF07244 Surface antigen variable number repeat 176 263 5.9E-16 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Pfam PF07244 Surface antigen variable number repeat 92 172 1.1E-10 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Pfam PF07244 Surface antigen variable number repeat 266 343 6.0E-11 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 PANTHER PTHR12815 703 810 0.0 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 PANTHER PTHR12815 5 673 0.0 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 PANTHER PTHR12815:SF11 703 810 0.0 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 PANTHER PTHR12815:SF11 5 673 0.0 T 21-04-2016 SDY_0193 02c895c303f51438b590287b1cdb4d3e 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 26.278 T 21-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 SUPERFAMILY SSF53800 4 318 3.66E-101 T 21-04-2016 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 21-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 Gene3D G3DSA:3.40.50.1400 3 201 7.5E-68 T 21-04-2016 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 Gene3D G3DSA:3.40.50.1400 202 317 2.7E-32 T 21-04-2016 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 Pfam PF00762 Ferrochelatase 5 317 5.0E-110 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.44 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 5.5E-135 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SDY_0444 aaa47c16a7c984d4bb036d20343946f0 320 PANTHER PTHR11108 1 317 2.0E-144 T 21-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SMART SM00387 233 349 1.2E-33 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.6E-14 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SMART SM00388 129 194 2.5E-13 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SUPERFAMILY SSF55874 198 346 6.42E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Gene3D G3DSA:3.30.450.20 11 102 2.9E-21 T 21-04-2016 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Gene3D G3DSA:1.10.287.130 129 186 1.4E-10 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SUPERFAMILY SSF55785 11 104 5.96E-7 T 21-04-2016 IPR000014 PAS domain SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 PANTHER PTHR24423 11 349 1.2E-183 T 21-04-2016 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.9E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.2E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.2E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-11 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 PANTHER PTHR24423:SF488 11 349 1.2E-183 T 21-04-2016 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Gene3D G3DSA:3.30.565.10 198 348 2.3E-38 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 Pfam PF00989 PAS fold 11 99 1.4E-7 T 21-04-2016 IPR013767 PAS fold GO:0006355 SDY_3874 7f6d3cafe1de7b6061f91b1cb0555aa5 349 SMART SM00091 7 75 2.8E-8 T 21-04-2016 IPR000014 PAS domain SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 Gene3D G3DSA:1.10.1040.10 181 433 1.9E-119 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 21-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PIRSF PIRSF000109 1 468 4.3E-243 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 SUPERFAMILY SSF51735 4 173 4.86E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 3.7E-232 T 21-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 21-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 Gene3D G3DSA:3.40.50.720 1 180 1.9E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 9.4E-132 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 3.3E-51 T 21-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 Gene3D G3DSA:1.20.5.320 436 467 2.3E-22 T 21-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PANTHER PTHR11811 1 466 1.1E-303 T 21-04-2016 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 PANTHER PTHR11811:SF25 1 466 1.1E-303 T 21-04-2016 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 SUPERFAMILY SSF48179 177 467 1.43E-131 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_2212 ef209990c756edc3ea8b30ee3a43548a 468 SMART SM01350 179 467 2.4E-222 T 21-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Pfam PF00231 ATP synthase 5 286 9.5E-92 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.385 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.86E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.86E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.86E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.86E-37 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PANTHER PTHR11693 1 287 8.5E-137 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 236 282 4.6E-30 T 21-04-2016 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 SUPERFAMILY SSF52943 2 287 5.1E-97 T 21-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 21-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:3.40.1380.10 63 191 5.0E-44 T 21-04-2016 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.9E-113 T 21-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 19 60 5.2E-40 T 21-04-2016 SDY_4015 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 202 235 5.2E-40 T 21-04-2016 SDY_2600 5eb42282a9859f79da94081eec398a22 471 SUPERFAMILY SSF48163 299 461 6.15E-46 T 21-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SDY_2600 5eb42282a9859f79da94081eec398a22 471 SUPERFAMILY SSF52374 3 298 2.55E-113 T 21-04-2016 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.064 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Gene3D G3DSA:1.10.1160.10 233 314 1.2E-36 T 21-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Gene3D G3DSA:1.10.10.350 363 462 7.4E-32 T 21-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Gene3D G3DSA:3.90.800.10 69 180 3.1E-39 T 21-04-2016 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Gene3D G3DSA:3.40.50.620 2 68 4.7E-54 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2600 5eb42282a9859f79da94081eec398a22 471 Gene3D G3DSA:3.40.50.620 181 231 4.7E-54 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2600 5eb42282a9859f79da94081eec398a22 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.6E-123 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 6.4E-212 T 21-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_2600 5eb42282a9859f79da94081eec398a22 471 PANTHER PTHR11451 1 319 3.3E-103 T 21-04-2016 SDY_3964 04727285195557d79c66d939ddb25687 367 PANTHER PTHR22926:SF3 10 358 3.8E-116 T 21-04-2016 SDY_3964 04727285195557d79c66d939ddb25687 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.3E-173 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 SDY_3964 04727285195557d79c66d939ddb25687 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.228 T 21-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 SDY_3964 04727285195557d79c66d939ddb25687 367 Pfam PF00953 Glycosyl transferase family 4 76 232 4.3E-28 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_3964 04727285195557d79c66d939ddb25687 367 PANTHER PTHR22926 10 358 3.8E-116 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_4612 2782063bb7fab0b5f19014ca9a470e6d 131 Gene3D G3DSA:3.40.50.720 1 75 1.4E-14 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4612 2782063bb7fab0b5f19014ca9a470e6d 131 PANTHER PTHR11695:SF38 1 131 2.3E-37 T 21-04-2016 SDY_4612 2782063bb7fab0b5f19014ca9a470e6d 131 SUPERFAMILY SSF51735 1 98 1.71E-14 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4612 2782063bb7fab0b5f19014ca9a470e6d 131 PANTHER PTHR11695 1 131 2.3E-37 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_4612 2782063bb7fab0b5f19014ca9a470e6d 131 Pfam PF00107 Zinc-binding dehydrogenase 1 91 2.2E-17 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 SUPERFAMILY SSF55620 186 268 1.04E-10 T 21-04-2016 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 Gene3D G3DSA:3.30.1130.10 145 282 4.7E-56 T 21-04-2016 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 Pfam PF14489 QueF-like protein 196 270 2.5E-27 T 21-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 167.864 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 7.0E-49 T 21-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 Gene3D G3DSA:3.30.1130.10 21 138 2.0E-44 T 21-04-2016 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 PANTHER PTHR34354 2 282 2.0E-110 T 21-04-2016 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 PIRSF PIRSF004750 6 282 1.0E-130 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 1.5E-129 T 21-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_3011 73d4b1265272b3a52a274ae2b822a963 282 PANTHER PTHR34354:SF1 2 282 2.0E-110 T 21-04-2016 SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 PANTHER PTHR12735:SF23 1 104 3.2E-70 T 21-04-2016 SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 PIRSF PIRSF003113 1 100 9.8E-34 T 21-04-2016 IPR002634 BolA protein SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 PANTHER PTHR12735 1 104 3.2E-70 T 21-04-2016 SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 Pfam PF01722 BolA-like protein 11 84 1.7E-29 T 21-04-2016 IPR002634 BolA protein SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 Gene3D G3DSA:3.30.300.90 1 101 5.0E-32 T 21-04-2016 IPR002634 BolA protein SDY_0298 a3aebedd25ddedfe1ade83d1e8475627 105 SUPERFAMILY SSF82657 1 89 7.85E-31 T 21-04-2016 IPR002634 BolA protein SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 1.3E-43 T 21-04-2016 IPR001405 RadC protein SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 Gene3D G3DSA:3.40.140.10 36 158 4.3E-50 T 21-04-2016 SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 PANTHER PTHR30471 15 158 3.6E-110 T 21-04-2016 SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 Pfam PF04002 RadC-like JAB domain 38 157 2.2E-43 T 21-04-2016 IPR025657 RadC-like JAB domain SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 21-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SDY_4590 a7af165f7f71be3b232aaae3afe968b9 158 PANTHER PTHR30471:SF4 15 158 3.6E-110 T 21-04-2016 SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 PIRSF PIRSF016184 1 295 3.2E-96 T 21-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 SUPERFAMILY SSF54506 1 294 1.44E-67 T 21-04-2016 SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 4.8E-130 T 21-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 PANTHER PTHR13774:SF21 1 296 1.6E-144 T 21-04-2016 SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 2.6E-91 T 21-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 Gene3D G3DSA:3.10.310.10 128 284 3.0E-48 T 21-04-2016 SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 Gene3D G3DSA:3.10.310.10 1 127 9.2E-42 T 21-04-2016 SDY_1654 b9b177adf58c71e1003ba9df8a08d2c3 297 PANTHER PTHR13774 1 296 1.6E-144 T 21-04-2016 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 1.2E-7 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 SUPERFAMILY SSF53254 1 143 1.28E-18 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 2.7E-65 T 21-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 PANTHER PTHR23029 1 77 3.3E-32 T 21-04-2016 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 PANTHER PTHR23029 127 156 3.3E-32 T 21-04-2016 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 PANTHER PTHR23029:SF49 1 77 3.3E-32 T 21-04-2016 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 PANTHER PTHR23029:SF49 127 156 3.3E-32 T 21-04-2016 SDY_2541 ae194f23f56132ba47ee6ecf58dfa930 161 Gene3D G3DSA:3.40.50.1240 1 157 9.6E-43 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_2786 4632f15729ad73b8b4abf85540f58506 398 Gene3D G3DSA:3.30.465.10 310 388 1.2E-24 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 Gene3D G3DSA:3.10.580.10 161 300 3.9E-12 T 21-04-2016 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 Pfam PF01595 Domain of unknown function DUF21 1 154 3.9E-41 T 21-04-2016 IPR002550 Domain of unknown function DUF21 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 Pfam PF00571 CBS domain 250 296 2.8E-4 T 21-04-2016 IPR000644 CBS domain SDY_2786 4632f15729ad73b8b4abf85540f58506 398 Pfam PF03471 Transporter associated domain 314 388 7.1E-19 T 21-04-2016 IPR005170 Transporter-associated domain SDY_2786 4632f15729ad73b8b4abf85540f58506 398 SUPERFAMILY SSF56176 310 392 1.42E-21 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 SUPERFAMILY SSF54631 162 299 1.71E-22 T 21-04-2016 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 PANTHER PTHR22777 1 398 1.1E-142 T 21-04-2016 SDY_2786 4632f15729ad73b8b4abf85540f58506 398 SMART SM01091 312 390 2.5E-25 T 21-04-2016 IPR005170 Transporter-associated domain SDY_2786 4632f15729ad73b8b4abf85540f58506 398 PANTHER PTHR22777:SF3 1 398 1.1E-142 T 21-04-2016 SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 Pfam PF00563 EAL domain 403 628 4.4E-36 T 21-04-2016 IPR001633 EAL domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 SUPERFAMILY SSF141868 403 642 2.62E-34 T 21-04-2016 IPR001633 EAL domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 SMART SM00052 395 635 7.7E-61 T 21-04-2016 IPR001633 EAL domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 SMART SM00267 213 385 4.1E-43 T 21-04-2016 IPR000160 GGDEF domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 1.4E-32 T 21-04-2016 IPR000160 GGDEF domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 381 1.0E-11 T 21-04-2016 IPR000160 GGDEF domain SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 SUPERFAMILY SSF55073 230 387 2.04E-22 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 5.1E-33 T 21-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 PANTHER PTHR33121 196 634 4.5E-19 T 21-04-2016 SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 PANTHER PTHR33121:SF16 196 634 4.5E-19 T 21-04-2016 SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 Gene3D G3DSA:3.30.70.270 227 391 4.5E-25 T 21-04-2016 SDY_3427 a4c83b46f07eba54a7ae9e5f4b03f4c3 646 Gene3D G3DSA:3.20.20.450 398 638 1.2E-33 T 21-04-2016 IPR001633 EAL domain SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 Gene3D G3DSA:2.60.40.1070 136 222 8.3E-25 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 154 210 4.2E-12 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PANTHER PTHR30251 46 221 5.3E-92 T 21-04-2016 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 SUPERFAMILY SSF49354 45 130 7.59E-23 T 21-04-2016 IPR008962 PapD-like SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PANTHER PTHR30251:SF5 46 221 5.3E-92 T 21-04-2016 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 SUPERFAMILY SSF49584 137 221 1.7E-19 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 130 3.3E-24 T 21-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 85 102 - T 21-04-2016 IPR018046 Pili assembly chaperone, conserved site SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PRINTS PR00969 Pili chaperone signature 86 103 3.8E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PRINTS PR00969 Pili chaperone signature 148 163 3.8E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PRINTS PR00969 Pili chaperone signature 112 127 3.8E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 PRINTS PR00969 Pili chaperone signature 56 77 3.8E-27 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_0652 b8e2286e6cfca329dda77ec49477ab04 231 Gene3D G3DSA:2.60.40.360 45 130 5.1E-27 T 21-04-2016 IPR008962 PapD-like SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 Gene3D G3DSA:3.40.50.10490 17 200 8.1E-52 T 21-04-2016 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 Pfam PF00571 CBS domain 206 261 6.2E-5 T 21-04-2016 IPR000644 CBS domain SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 Pfam PF00571 CBS domain 274 325 3.9E-5 T 21-04-2016 IPR000644 CBS domain SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 Gene3D G3DSA:3.10.580.10 201 325 1.8E-38 T 21-04-2016 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 1.4E-134 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 SUPERFAMILY SSF53697 14 325 3.34E-68 T 21-04-2016 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 PANTHER PTHR11911 180 325 1.0E-42 T 21-04-2016 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 PANTHER PTHR11911:SF90 180 325 1.0E-42 T 21-04-2016 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 PIRSF PIRSF004692 1 328 4.5E-135 T 21-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SDY_3378 d2f26d0bf435e3d1614adb1853780615 328 Pfam PF01380 SIS domain 46 177 1.0E-35 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384 141 172 1.6E-93 T 21-04-2016 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384 1 119 1.6E-93 T 21-04-2016 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 1.8E-69 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 SUPERFAMILY SSF52218 1 168 1.51E-46 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 Gene3D G3DSA:3.40.50.360 1 168 5.9E-56 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 Pfam PF00258 Flavodoxin 5 160 4.0E-28 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384:SF73 141 172 1.6E-93 T 21-04-2016 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384:SF73 1 119 1.6E-93 T 21-04-2016 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 PIRSF PIRSF038996 1 172 2.3E-55 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SDY_3187 bdb84d882dd9a33c97d64ebed39a9242 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SDY_2025 47816567826a65213ee7283064a92c30 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 9.4E-17 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SDY_2025 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF55031 208 320 2.56E-43 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_2025 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.40.630.10 322 407 2.5E-119 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.40.630.10 1 208 2.5E-119 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014 2 91 1.1E-203 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014 131 408 1.1E-203 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.59 T 21-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SDY_2025 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 322 406 1.94E-84 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 1 209 1.94E-84 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014:SF3 2 91 1.1E-203 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014:SF3 131 408 1.1E-203 T 21-04-2016 SDY_2025 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_2025 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.30.70.360 209 319 2.4E-44 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_2025 47816567826a65213ee7283064a92c30 408 PIRSF PIRSF037215 1 408 1.4E-182 T 21-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SDY_2025 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_2025 47816567826a65213ee7283064a92c30 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 8.7E-158 T 21-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SDY_2025 47816567826a65213ee7283064a92c30 408 Pfam PF07687 Peptidase dimerisation domain 206 303 1.4E-11 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 Gene3D G3DSA:3.40.225.10 1 271 2.2E-108 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 SMART SM01007 11 239 6.4E-31 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 SUPERFAMILY SSF53639 1 271 5.1E-77 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 PANTHER PTHR22789 68 272 6.7E-137 T 21-04-2016 SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 PANTHER PTHR22789 1 39 6.7E-137 T 21-04-2016 SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.481 T 21-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 9.9E-140 T 21-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 4.3E-35 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 PANTHER PTHR22789:SF4 68 272 6.7E-137 T 21-04-2016 SDY_3844 8e8439708cf2f7588fa4fd80662251db 274 PANTHER PTHR22789:SF4 1 39 6.7E-137 T 21-04-2016 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.0E-29 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PANTHER PTHR11817 1 479 0.0 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Gene3D G3DSA:3.40.1380.20 332 480 1.3E-39 T 21-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.2E-51 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Gene3D G3DSA:2.40.33.10 77 170 1.7E-27 T 21-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 PANTHER PTHR11817:SF17 1 479 0.0 T 21-04-2016 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Gene3D G3DSA:3.20.20.60 6 76 1.2E-93 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Gene3D G3DSA:3.20.20.60 172 331 1.2E-93 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 21-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.4E-175 T 21-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 9.0E-131 T 21-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 SUPERFAMILY SSF52935 329 479 2.35E-39 T 21-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 SUPERFAMILY SSF51621 3 78 2.58E-86 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_1141 26edb57af4682923dcd5f7eedccce269 480 SUPERFAMILY SSF51621 160 345 2.58E-86 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.1E-238 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 SUPERFAMILY SSF52540 3 441 2.09E-94 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Gene3D G3DSA:1.10.8.10 111 177 3.3E-34 T 21-04-2016 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Gene3D G3DSA:1.10.8.10 213 243 3.3E-34 T 21-04-2016 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.653 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 PANTHER PTHR11262 218 443 1.1E-211 T 21-04-2016 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 PANTHER PTHR11262 1 105 1.1E-211 T 21-04-2016 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 SMART SM00382 49 332 4.6E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Gene3D G3DSA:1.10.8.60 335 443 2.0E-34 T 21-04-2016 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.3E-5 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Gene3D G3DSA:3.40.50.300 245 331 2.9E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Gene3D G3DSA:3.40.50.300 3 110 2.9E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 52 113 2.4E-6 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 8.6E-43 T 21-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 SMART SM01086 335 434 1.3E-21 T 21-04-2016 IPR019489 Clp ATPase, C-terminal SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 PANTHER PTHR11262:SF3 218 443 1.1E-211 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SDY_3806 7948fad30778b7f84a8134969e5da5fc 443 PANTHER PTHR11262:SF3 1 105 1.1E-211 T 21-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SUPERFAMILY SSF56801 429 989 2.49E-146 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 PANTHER PTHR24095:SF137 1075 1108 0.0 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 PANTHER PTHR24095:SF137 1 1047 0.0 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SUPERFAMILY SSF53474 1050 1291 4.7E-45 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SMART SM00824 Thioesterase 1069 1245 0.0052 T 21-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SUPERFAMILY SSF52777 9 183 5.67E-32 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:3.30.300.30 857 964 1.6E-28 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:3.40.50.1820 1050 1170 1.0E-39 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:3.40.50.1820 1225 1292 1.0E-39 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Pfam PF00975 Thioesterase domain 1067 1281 1.2E-47 T 21-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Pfam PF00668 Condensation domain 2 300 1.9E-72 T 21-04-2016 IPR001242 Condensation domain SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:1.10.1200.10 967 1047 3.9E-18 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 21-04-2016 IPR006162 Phosphopantetheine attachment site SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 886 5.9E-125 T 21-04-2016 IPR010071 Amino acid adenylation domain SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Pfam PF00501 AMP-binding enzyme 462 863 1.5E-95 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:3.40.50.980 455 621 1.8E-42 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.0068 T 21-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 PANTHER PTHR24095 1075 1108 0.0 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 PANTHER PTHR24095 1 1047 0.0 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SUPERFAMILY SSF47336 971 1042 4.19E-12 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:3.40.50.980 622 775 6.4E-44 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Gene3D G3DSA:2.30.38.10 776 853 3.1E-26 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 SUPERFAMILY SSF52777 190 426 6.45E-32 T 21-04-2016 SDY_0515 6300de5a94bf6158c82bc5938deb0317 1293 Pfam PF00550 Phosphopantetheine attachment site 980 1040 1.8E-10 T 21-04-2016 IPR009081 Phosphopantetheine binding ACP domain SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.77E-87 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 2.1E-180 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206 217 442 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206 70 82 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206 469 481 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206:SF90 217 442 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206:SF90 70 82 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PANTHER PTHR11206:SF90 469 481 3.0E-100 T 21-04-2016 SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 PIRSF PIRSF002869 1 511 6.8E-184 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_2083 41f9ed44c2832d0fcd9d9d433f189096 511 Pfam PF03023 MviN-like protein 28 478 2.6E-162 T 21-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 PANTHER PTHR33254 1 161 6.5E-108 T 21-04-2016 SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 Gene3D G3DSA:3.50.30.40 1 156 1.1E-44 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.2E-61 T 21-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 SUPERFAMILY SSF89562 2 158 1.15E-43 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 1.5E-34 T 21-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 PANTHER PTHR33254:SF7 1 161 6.5E-108 T 21-04-2016 SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.449 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 SDY_3808 e6b5b7c5ec81b333720f9ae45ef4216e 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.2E-89 T 21-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 Pfam PF00005 ABC transporter 274 419 6.1E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 Pfam PF00005 ABC transporter 22 171 3.3E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 SMART SM00382 280 468 9.3E-6 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 SMART SM00382 31 218 8.5E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 PANTHER PTHR24220 8 380 2.4E-177 T 21-04-2016 SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 Gene3D G3DSA:3.40.50.300 2 234 4.2E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 Gene3D G3DSA:3.40.50.300 275 485 8.5E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 SUPERFAMILY SSF52540 5 230 6.58E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 SUPERFAMILY SSF52540 272 479 5.8E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 PANTHER PTHR24220:SF416 8 380 2.4E-177 T 21-04-2016 SDY_4128 1f0bafd3f450316826e7231e69e1e735 495 ProSitePatterns PS00211 ABC transporters family signature. 392 406 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.321 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 Gene3D G3DSA:3.40.50.150 91 312 2.0E-28 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.8E-171 T 21-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 320 1.1E-146 T 21-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 SUPERFAMILY SSF53335 91 323 8.88E-33 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 PANTHER PTHR10108:SF847 55 322 2.4E-141 T 21-04-2016 SDY_1170 b6a8d50f2828e9e5d93ad368c6129bf7 323 PANTHER PTHR10108 55 322 2.4E-141 T 21-04-2016 SDY_2476 dadb23aca088493e208ad39c45dda147 184 PANTHER PTHR33269:SF2 1 183 2.0E-115 T 21-04-2016 SDY_2476 dadb23aca088493e208ad39c45dda147 184 PANTHER PTHR33269 1 183 2.0E-115 T 21-04-2016 SDY_2476 dadb23aca088493e208ad39c45dda147 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.0E-33 T 21-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 SDY_2535 3dc888139490b77ec74591bb096ee940 249 SUPERFAMILY SSF49354 28 146 9.68E-37 T 21-04-2016 IPR008962 PapD-like SDY_2535 3dc888139490b77ec74591bb096ee940 249 PANTHER PTHR30251:SF6 1 237 5.1E-141 T 21-04-2016 SDY_2535 3dc888139490b77ec74591bb096ee940 249 Gene3D G3DSA:2.60.40.1070 151 240 5.2E-27 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_2535 3dc888139490b77ec74591bb096ee940 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 227 1.3E-9 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_2535 3dc888139490b77ec74591bb096ee940 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 21-04-2016 IPR018046 Pili assembly chaperone, conserved site SDY_2535 3dc888139490b77ec74591bb096ee940 249 SUPERFAMILY SSF49584 153 241 4.58E-23 T 21-04-2016 IPR016148 Pili assembly chaperone, C-terminal SDY_2535 3dc888139490b77ec74591bb096ee940 249 PANTHER PTHR30251 1 237 5.1E-141 T 21-04-2016 SDY_2535 3dc888139490b77ec74591bb096ee940 249 Gene3D G3DSA:2.60.40.360 28 146 1.8E-43 T 21-04-2016 IPR008962 PapD-like SDY_2535 3dc888139490b77ec74591bb096ee940 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 146 1.4E-37 T 21-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 SDY_2535 3dc888139490b77ec74591bb096ee940 249 PRINTS PR00969 Pili chaperone signature 75 96 1.8E-29 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_2535 3dc888139490b77ec74591bb096ee940 249 PRINTS PR00969 Pili chaperone signature 105 122 1.8E-29 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_2535 3dc888139490b77ec74591bb096ee940 249 PRINTS PR00969 Pili chaperone signature 165 180 1.8E-29 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_2535 3dc888139490b77ec74591bb096ee940 249 PRINTS PR00969 Pili chaperone signature 128 143 1.8E-29 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_2535 3dc888139490b77ec74591bb096ee940 249 PRINTS PR00969 Pili chaperone signature 29 38 1.8E-29 T 21-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 SDY_1420 7234c8d59cf29768903d68c490676635 99 Pfam PF00990 Diguanylate cyclase, GGDEF domain 3 95 9.9E-22 T 21-04-2016 IPR000160 GGDEF domain SDY_1420 7234c8d59cf29768903d68c490676635 99 SUPERFAMILY SSF55073 5 97 2.04E-23 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1420 7234c8d59cf29768903d68c490676635 99 Gene3D G3DSA:3.30.70.270 4 97 4.5E-24 T 21-04-2016 SDY_1420 7234c8d59cf29768903d68c490676635 99 PANTHER PTHR10799:SF750 11 96 4.8E-17 T 21-04-2016 SDY_1420 7234c8d59cf29768903d68c490676635 99 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 6 97 1.8E-21 T 21-04-2016 IPR000160 GGDEF domain SDY_1420 7234c8d59cf29768903d68c490676635 99 PANTHER PTHR10799 11 96 4.8E-17 T 21-04-2016 SDY_1420 7234c8d59cf29768903d68c490676635 99 SMART SM00267 1 99 5.5E-6 T 21-04-2016 IPR000160 GGDEF domain SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 PIRSF PIRSF006188 1 72 4.0E-38 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 Gene3D G3DSA:1.10.3390.10 1 75 2.1E-38 T 21-04-2016 IPR023202 YejL-like domain SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 SUPERFAMILY SSF158651 1 75 9.68E-32 T 21-04-2016 SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.5E-23 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-33 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 SDY_0892 aa5506e2699e81a0e10b5af7af53c09c 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.441 T 21-04-2016 IPR009857 Uncharacterised protein family UPF0352 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Gene3D G3DSA:3.30.1490.100 246 351 2.8E-5 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 PANTHER PTHR11076 1 411 8.9E-210 T 21-04-2016 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Pfam PF13438 Domain of unknown function (DUF4113) 368 418 8.0E-22 T 21-04-2016 IPR025188 Domain of unknown function DUF4113 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 SUPERFAMILY SSF100879 247 342 1.75E-5 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Gene3D G3DSA:1.10.150.20 167 237 3.0E-23 T 21-04-2016 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 PANTHER PTHR11076:SF40 1 411 8.9E-210 T 21-04-2016 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Gene3D G3DSA:3.30.70.270 64 154 5.2E-25 T 21-04-2016 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 SUPERFAMILY SSF56672 1 234 2.31E-67 T 21-04-2016 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 348 1.0E-10 T 21-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Pfam PF00817 impB/mucB/samB family 5 147 7.4E-33 T 21-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1221 eef66c84ccc8c05884a053ecd2a051e8 419 Pfam PF11798 IMS family HHH motif 169 197 2.3E-6 T 21-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0676 cd146e11c082ca261edc0c080afb4829 170 Pfam PF02310 B12 binding domain 27 117 2.0E-14 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_0676 cd146e11c082ca261edc0c080afb4829 170 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 22 158 37.971 T 21-04-2016 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0676 cd146e11c082ca261edc0c080afb4829 170 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 24 157 2.0E-74 T 21-04-2016 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0676 cd146e11c082ca261edc0c080afb4829 170 Gene3D G3DSA:3.40.50.280 23 159 7.7E-36 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_0676 cd146e11c082ca261edc0c080afb4829 170 SUPERFAMILY SSF52242 23 160 5.36E-35 T 21-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.150.130 7 99 4.2E-30 T 21-04-2016 IPR023109 Integrase/recombinase, N-terminal SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.443.10 113 289 7.8E-60 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF47823 4 100 8.04E-36 T 21-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 3.8E-25 T 21-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 298 31.658 T 21-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 66.874 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 Pfam PF00589 Phage integrase family 113 284 2.6E-56 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF56349 106 296 5.0E-60 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 PANTHER PTHR30349 7 298 8.7E-127 T 21-04-2016 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 PANTHER PTHR30349:SF5 7 298 8.7E-127 T 21-04-2016 SDY_3188 a1b221e930a1b909bc57d6057389959d 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 6.3E-120 T 21-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SDY_0813 0c78cdc374fac6cd3c96e9c1dfb271b4 253 SUPERFAMILY SSF56219 8 251 2.62E-52 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0813 0c78cdc374fac6cd3c96e9c1dfb271b4 253 Gene3D G3DSA:3.60.10.10 3 251 2.5E-23 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0813 0c78cdc374fac6cd3c96e9c1dfb271b4 253 PANTHER PTHR15822:SF7 1 251 1.8E-117 T 21-04-2016 SDY_0813 0c78cdc374fac6cd3c96e9c1dfb271b4 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 244 1.4E-20 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0813 0c78cdc374fac6cd3c96e9c1dfb271b4 253 PANTHER PTHR15822 1 251 1.8E-117 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 SUPERFAMILY SSF109604 313 507 4.97E-59 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 PANTHER PTHR30005 1 512 7.5E-272 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 Gene3D G3DSA:3.30.420.40 5 131 5.8E-41 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 5.3E-105 T 21-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 SUPERFAMILY SSF53067 13 133 1.3E-35 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 PIRSF PIRSF001267 3 506 6.4E-205 T 21-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 SUPERFAMILY SSF53067 137 310 1.3E-47 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 PANTHER PTHR30005:SF4 1 512 7.5E-272 T 21-04-2016 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 3.9E-96 T 21-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 SDY_2691 4c7ce702f59330f825af5c45916d7607 513 Gene3D G3DSA:3.30.420.150 132 311 1.1E-52 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 PANTHER PTHR10516 129 191 4.6E-69 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 PANTHER PTHR10516 1 83 4.6E-69 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 PANTHER PTHR10516:SF316 129 191 4.6E-69 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 PANTHER PTHR10516:SF316 1 83 4.6E-69 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 SUPERFAMILY SSF54534 2 140 1.45E-33 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 Gene3D G3DSA:3.10.50.40 2 80 4.8E-16 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 Gene3D G3DSA:3.10.50.40 126 141 4.8E-16 T 21-04-2016 SDY_3510 73fe163dc2ed7404ab333343bb32f8e7 192 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 4.0E-10 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SDY_0871 d558743b354768eeddc003f5bfd98304 87 Pfam PF03927 NapD protein 5 81 8.9E-27 T 21-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SDY_0871 d558743b354768eeddc003f5bfd98304 87 PANTHER PTHR38603 1 87 4.7E-37 T 21-04-2016 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 Gene3D G3DSA:1.10.8.10 168 207 2.2E-26 T 21-04-2016 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 SUPERFAMILY SSF52540 1 207 3.49E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 Pfam PF13177 DNA polymerase III, delta subunit 12 164 2.1E-40 T 21-04-2016 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 SUPERFAMILY SSF48019 208 328 9.69E-38 T 21-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 PANTHER PTHR11669 11 320 2.6E-123 T 21-04-2016 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 2.9E-37 T 21-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 PANTHER PTHR11669:SF8 11 320 2.6E-123 T 21-04-2016 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 Gene3D G3DSA:3.40.50.300 9 166 2.7E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 1.6E-59 T 21-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_2051 a8e8626f40eceb22be9a96db154bf0f0 334 Gene3D G3DSA:1.20.272.10 208 328 4.7E-48 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 SUPERFAMILY SSF111369 187 260 1.7E-8 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 SUPERFAMILY SSF111369 105 154 1.7E-8 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 PANTHER PTHR30386 1 369 2.4E-188 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 Gene3D G3DSA:2.40.50.100 57 87 1.6E-16 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 Gene3D G3DSA:2.40.50.100 208 241 1.6E-16 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 34 340 2.0E-16 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 285 1.0E-13 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 PANTHER PTHR30386:SF6 1 369 2.4E-188 T 21-04-2016 SDY_2563 7e40240dd9a742604070fbf7c1b3a375 387 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 14 338 1.7E-146 T 21-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 SDY_0314 560979520c8ffa9810bbba7ff5e5178b 131 Pfam PF03400 IS1 transposase 2 131 3.0E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0314 560979520c8ffa9810bbba7ff5e5178b 131 PANTHER PTHR33293:SF1 6 126 1.2E-23 T 21-04-2016 SDY_0314 560979520c8ffa9810bbba7ff5e5178b 131 PANTHER PTHR33293 6 126 1.2E-23 T 21-04-2016 SDY_4392 0c89793f6fece8d36172e0d6f83da7e0 105 PANTHER PTHR30561:SF0 1 105 8.0E-55 T 21-04-2016 SDY_4392 0c89793f6fece8d36172e0d6f83da7e0 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.8E-33 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SDY_4392 0c89793f6fece8d36172e0d6f83da7e0 105 PANTHER PTHR30561 1 105 8.0E-55 T 21-04-2016 SDY_4392 0c89793f6fece8d36172e0d6f83da7e0 105 SUPERFAMILY SSF103481 5 103 6.15E-21 T 21-04-2016 SDY_4343 a94b04fcc5ac95d47e467856b0f947b8 99 Pfam PF13983 YsaB-like lipoprotein 25 99 4.8E-42 T 21-04-2016 IPR025728 YsaB-like lipoprotein SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 Pfam PF02355 Protein export membrane protein 117 301 2.4E-69 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 PANTHER PTHR30081 7 318 1.6E-91 T 21-04-2016 SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.1 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.5E-11 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 Gene3D G3DSA:1.20.1640.10 140 305 7.1E-24 T 21-04-2016 SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 2.6E-87 T 21-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 SUPERFAMILY SSF82866 79 303 9.29E-39 T 21-04-2016 SDY_0325 ca826626efc7c2f0b1043d605db029c5 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 3.9E-54 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_3580 ebb53170606a348b7e6b3f6c96c87a3b 197 Pfam PF01914 MarC family integral membrane protein 1 195 2.6E-65 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SDY_3580 ebb53170606a348b7e6b3f6c96c87a3b 197 PANTHER PTHR33508:SF4 1 197 1.8E-95 T 21-04-2016 SDY_3580 ebb53170606a348b7e6b3f6c96c87a3b 197 PANTHER PTHR33508 1 197 1.8E-95 T 21-04-2016 SDY_3580 ebb53170606a348b7e6b3f6c96c87a3b 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 4.5E-31 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.4E-60 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 PANTHER PTHR30272 1 151 4.7E-89 T 21-04-2016 SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 Pfam PF07977 FabA-like domain 17 141 1.9E-40 T 21-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 SUPERFAMILY SSF54637 10 149 1.13E-50 T 21-04-2016 IPR029069 HotDog domain SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.519 T 21-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SDY_0196 46caa69780821a1c8b8b3d0bd5790569 151 Gene3D G3DSA:3.10.129.10 4 147 5.6E-59 T 21-04-2016 IPR029069 HotDog domain SDY_1279 1b896885f72aa51e60097b34099a2099 1247 SUPERFAMILY SSF53706 4 1074 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 3.9E-196 T 21-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:2.20.25.90 52 98 2.5E-32 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 21-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 21-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:3.40.228.10 225 337 1.2E-93 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:3.40.228.10 493 613 1.2E-93 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615 852 877 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615 34 348 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615 366 412 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615 697 836 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615 995 1229 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:4.10.1200.10 1 28 1.5E-19 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615:SF165 852 877 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615:SF165 34 348 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615:SF165 366 412 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615:SF165 697 836 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 PANTHER PTHR11615:SF165 995 1229 0.0 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:3.40.50.740 108 224 3.0E-68 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:3.40.50.740 652 727 3.0E-68 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:3.40.50.740 759 834 3.0E-68 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 SMART SM00926 43 105 6.6E-8 T 21-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 1.6E-21 T 21-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Gene3D G3DSA:2.40.40.20 1054 1234 4.2E-45 T 21-04-2016 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 SUPERFAMILY SSF50692 1081 1235 2.94E-47 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_1279 1b896885f72aa51e60097b34099a2099 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 7.6E-17 T 21-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 SDY_1279 1b896885f72aa51e60097b34099a2099 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 21-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 555 1.5E-63 T 21-04-2016 IPR000160 GGDEF domain SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 SUPERFAMILY SSF55073 397 555 5.26E-44 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 Pfam PF17151 Periplasmic sensor domain 35 220 9.3E-83 T 21-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 PANTHER PTHR10799 429 551 1.4E-22 T 21-04-2016 SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 392 551 9.7E-47 T 21-04-2016 IPR000160 GGDEF domain SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 Gene3D G3DSA:3.30.70.270 394 555 4.3E-51 T 21-04-2016 SDY_1050 4339f2dc38eedcf7c52b7d09af249846 558 SMART SM00267 381 555 1.5E-66 T 21-04-2016 IPR000160 GGDEF domain SDY_2793 977ce8806a2aa645622b342adb4254db 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 21-04-2016 IPR020081 SsrA-binding protein, conserved site SDY_2793 977ce8806a2aa645622b342adb4254db 160 PANTHER PTHR30308 1 160 2.8E-88 T 21-04-2016 SDY_2793 977ce8806a2aa645622b342adb4254db 160 Pfam PF01668 SmpB protein 13 75 3.9E-28 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 SDY_2793 977ce8806a2aa645622b342adb4254db 160 SUPERFAMILY SSF74982 8 138 7.19E-51 T 21-04-2016 IPR023620 Small protein B SDY_2793 977ce8806a2aa645622b342adb4254db 160 PANTHER PTHR30308:SF2 1 160 2.8E-88 T 21-04-2016 SDY_2793 977ce8806a2aa645622b342adb4254db 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-69 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 SDY_2793 977ce8806a2aa645622b342adb4254db 160 Gene3D G3DSA:2.40.280.10 13 133 1.4E-49 T 21-04-2016 IPR023620 Small protein B SDY_2793 977ce8806a2aa645622b342adb4254db 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.317 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 SDY_2793 977ce8806a2aa645622b342adb4254db 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.7E-54 T 21-04-2016 IPR000037 SsrA-binding protein GO:0003723 SDY_0317 4a9714e376579345e33292b828ad2107 325 Gene3D G3DSA:3.90.650.10 145 322 2.0E-54 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_0317 4a9714e376579345e33292b828ad2107 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.327 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SDY_0317 4a9714e376579345e33292b828ad2107 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 2.2E-119 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SDY_0317 4a9714e376579345e33292b828ad2107 325 SUPERFAMILY SSF56042 143 305 1.3E-40 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_0317 4a9714e376579345e33292b828ad2107 325 PIRSF PIRSF005303 1 322 3.7E-87 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SDY_0317 4a9714e376579345e33292b828ad2107 325 Gene3D G3DSA:3.30.1330.10 3 139 8.3E-46 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_0317 4a9714e376579345e33292b828ad2107 325 SUPERFAMILY SSF55326 4 138 1.41E-34 T 21-04-2016 SDY_0317 4a9714e376579345e33292b828ad2107 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 1.6E-9 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_0317 4a9714e376579345e33292b828ad2107 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.8E-21 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_0317 4a9714e376579345e33292b828ad2107 325 PANTHER PTHR30270:SF0 1 325 1.4E-151 T 21-04-2016 SDY_0317 4a9714e376579345e33292b828ad2107 325 PANTHER PTHR30270 1 325 1.4E-151 T 21-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PIRSF PIRSF016821 6 133 5.3E-41 T 21-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SUPERFAMILY SSF55174 7 103 4.32E-31 T 21-04-2016 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Gene3D G3DSA:3.10.290.10 7 103 4.0E-39 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SMART SM00363 9 72 1.2E-11 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Pfam PF01479 S4 domain 9 53 2.8E-13 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079 109 115 7.6E-33 T 21-04-2016 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079 1 62 7.6E-33 T 21-04-2016 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079:SF70 109 115 7.6E-33 T 21-04-2016 SDY_3678 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079:SF70 1 62 7.6E-33 T 21-04-2016 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 Gene3D G3DSA:1.10.1610.10 1 73 8.4E-29 T 21-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 Gene3D G3DSA:3.40.50.10210 74 330 6.5E-103 T 21-04-2016 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 PANTHER PTHR21712:SF4 4 350 4.9E-125 T 21-04-2016 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 PANTHER PTHR21712 4 350 4.9E-125 T 21-04-2016 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 SUPERFAMILY SSF52733 6 344 6.8E-111 T 21-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 346 1.9E-116 T 21-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 349 33.748 T 21-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SDY_2242 500f380f1e898abf5d77adad328d56c0 359 Pfam PF02277 Phosphoribosyltransferase 11 345 2.4E-117 T 21-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 PANTHER PTHR31350 1 107 2.7E-27 T 21-04-2016 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 22 114 2.3E-18 T 21-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 21 119 6.5E-35 T 21-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 18 122 36.338 T 21-04-2016 IPR022866 Heat shock protein HspQ SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 SMART SM00992 20 119 4.9E-33 T 21-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 PANTHER PTHR31350:SF6 1 107 2.7E-27 T 21-04-2016 SDY_0941 d0b2f821c7c2d2712ce8be3e4f7c5f39 122 SUPERFAMILY SSF141255 21 112 2.88E-29 T 21-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 535 1.1E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PANTHER PTHR24423:SF375 200 543 6.2E-194 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PANTHER PTHR24423:SF375 1 167 6.2E-194 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PANTHER PTHR24423 200 543 6.2E-194 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PANTHER PTHR24423 1 167 6.2E-194 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.450.20 41 179 9.2E-52 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.565.10 416 535 1.4E-28 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 387 5.9E-12 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF00989 PAS fold 222 323 4.4E-14 T 21-04-2016 IPR013767 PAS fold GO:0006355 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SMART SM00091 222 288 7.4E-6 T 21-04-2016 IPR000014 PAS domain SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:1.10.287.130 329 387 1.3E-23 T 21-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55874 433 535 5.5E-29 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55890 338 465 1.57E-16 T 21-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.450.20 222 328 3.2E-12 T 21-04-2016 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SMART SM00387 430 538 1.8E-24 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF17203 Single cache domain 3 47 179 7.9E-22 T 21-04-2016 IPR033463 Single cache domain 3 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.35E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.35E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 1.35E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.35E-10 T 21-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF103190 46 179 2.83E-41 T 21-04-2016 IPR029151 Periplasmic sensor domain-like SDY_4238 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55785 222 323 7.04E-7 T 21-04-2016 IPR000014 PAS domain SDY_2352 69616ea6850ad8eb559e45bca5b9227f 448 SUPERFAMILY SSF53098 117 419 3.34E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2352 69616ea6850ad8eb559e45bca5b9227f 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 2.4E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_2352 69616ea6850ad8eb559e45bca5b9227f 448 PANTHER PTHR37529 4 446 8.7E-84 T 21-04-2016 SDY_2352 69616ea6850ad8eb559e45bca5b9227f 448 Pfam PF01609 Transposase DDE domain 134 358 5.0E-30 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 PANTHER PTHR10196:SF6 1 375 1.4E-152 T 21-04-2016 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 Gene3D G3DSA:3.30.420.40 261 368 8.9E-15 T 21-04-2016 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 SUPERFAMILY SSF53067 7 138 2.98E-21 T 21-04-2016 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 Gene3D G3DSA:3.30.420.40 6 138 6.0E-10 T 21-04-2016 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 151 337 4.2E-26 T 21-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 PANTHER PTHR10196 1 375 1.4E-152 T 21-04-2016 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 139 2.9E-9 T 21-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SDY_3842 6b680b0eea376010f6c23d4160dc3f0a 387 SUPERFAMILY SSF53067 150 369 3.89E-31 T 21-04-2016 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 PANTHER PTHR30465 13 273 3.2E-92 T 21-04-2016 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 8.7E-29 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 Gene3D G3DSA:1.10.3720.10 62 269 5.0E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 7.0E-120 T 21-04-2016 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 SUPERFAMILY SSF161098 66 255 3.43E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3633 5ce512315aa743da5d5340f8e6f8c005 277 PANTHER PTHR30465:SF2 13 273 3.2E-92 T 21-04-2016 SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 SUPERFAMILY SSF55136 7 159 7.67E-31 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 Gene3D G3DSA:3.20.80.10 7 159 1.9E-42 T 21-04-2016 IPR011256 Regulatory factor, effector binding domain SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 PANTHER PTHR40055 1 160 2.1E-69 T 21-04-2016 SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 SMART SM00871 6 160 2.0E-30 T 21-04-2016 IPR010499 Bacterial transcription activator, effector binding SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 PANTHER PTHR40055:SF1 1 160 2.1E-69 T 21-04-2016 SDY_3216 00dda25751d95c4edd5f3e1d6bd89ee6 160 Pfam PF06445 GyrI-like small molecule binding domain 7 159 1.2E-30 T 21-04-2016 IPR029442 GyrI-like small molecule binding domain SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF08281 Sigma-70, region 4 129 180 4.4E-19 T 21-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.1740.10 2 108 8.4E-38 T 21-04-2016 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 PANTHER PTHR30173 1 186 1.3E-55 T 21-04-2016 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.2E-99 T 21-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 6.8E-32 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 PANTHER PTHR30173:SF1 1 186 1.3E-55 T 21-04-2016 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88946 2 105 5.34E-32 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 21-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.10.10 122 187 5.2E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2814 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF04542 Sigma-70 region 2 25 91 4.2E-18 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3656 8101d089b26d912cd18f61b77c5a0a63 161 PANTHER PTHR36449 1 160 1.8E-40 T 21-04-2016 SDY_3656 8101d089b26d912cd18f61b77c5a0a63 161 Gene3D G3DSA:3.40.630.30 30 146 3.3E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3656 8101d089b26d912cd18f61b77c5a0a63 161 SUPERFAMILY SSF55729 27 148 3.3E-11 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3656 8101d089b26d912cd18f61b77c5a0a63 161 Pfam PF00583 Acetyltransferase (GNAT) family 54 144 4.9E-6 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 Gene3D G3DSA:3.40.190.10 197 252 1.2E-8 T 21-04-2016 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 SUPERFAMILY SSF53850 89 294 1.69E-31 T 21-04-2016 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 Gene3D G3DSA:3.40.190.10 82 196 2.0E-23 T 21-04-2016 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 PANTHER PTHR30126:SF14 1 296 1.6E-200 T 21-04-2016 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 Pfam PF03466 LysR substrate binding domain 89 293 4.3E-37 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3975 4f0312afe123013acd62e814d28f97cf 296 PANTHER PTHR30126 1 296 1.6E-200 T 21-04-2016 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 SUPERFAMILY SSF46785 1 111 5.52E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3975 4f0312afe123013acd62e814d28f97cf 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-21 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3975 4f0312afe123013acd62e814d28f97cf 296 Gene3D G3DSA:1.10.10.10 2 81 3.7E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 Gene3D G3DSA:3.40.50.150 160 267 1.5E-54 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 Gene3D G3DSA:3.40.50.150 1 59 1.5E-54 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 SUPERFAMILY SSF53335 5 267 1.5E-77 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-19 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.2E-19 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-19 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-19 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PANTHER PTHR30481:SF3 2 273 1.4E-137 T 21-04-2016 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 251 2.1E-75 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 Gene3D G3DSA:1.10.1020.10 60 157 1.5E-34 T 21-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PIRSF PIRSF000398 1 272 1.4E-67 T 21-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 7.0E-106 T 21-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SDY_3692 5745fc36b7cd12df5534bc90be6d0344 278 PANTHER PTHR30481 2 273 1.4E-137 T 21-04-2016 SDY_1748 bc4a8051d759b00934bd3719c4bd3aaa 326 PANTHER PTHR37955 1 325 2.8E-104 T 21-04-2016 SDY_1748 bc4a8051d759b00934bd3719c4bd3aaa 326 Pfam PF03595 Voltage-dependent anion channel 8 301 7.6E-34 T 21-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SDY_1748 bc4a8051d759b00934bd3719c4bd3aaa 326 PANTHER PTHR37955:SF1 1 325 2.8E-104 T 21-04-2016 SDY_1748 bc4a8051d759b00934bd3719c4bd3aaa 326 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 9 308 1.4E-105 T 21-04-2016 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 SDY_2638 eb7e917aa4b63f735de21bbbc042fd26 295 PIRSF PIRSF018982 46 295 1.2E-101 T 21-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 SDY_2638 eb7e917aa4b63f735de21bbbc042fd26 295 PANTHER PTHR39330 2 295 8.3E-134 T 21-04-2016 SDY_2638 eb7e917aa4b63f735de21bbbc042fd26 295 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 57 294 40.537 T 21-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 SDY_2638 eb7e917aa4b63f735de21bbbc042fd26 295 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 65 293 9.1E-78 T 21-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 34.014 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 Pfam PF01553 Acyltransferase 282 424 4.4E-26 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 SUPERFAMILY SSF69593 245 482 3.66E-23 T 21-04-2016 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF000437 19 807 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563 144 776 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563 1 117 0.0 T 21-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563:SF14 144 776 0.0 T 21-04-2016 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563:SF14 1 117 0.0 T 21-04-2016 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 SMART SM00563 300 427 1.1E-27 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_4533 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF500064 2 807 0.0 T 21-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 SDY_4342 c266d6bb4ba0f91c076ac717b70257b8 276 Pfam PF00665 Integrase core domain 72 186 6.1E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4342 c266d6bb4ba0f91c076ac717b70257b8 276 PANTHER PTHR32552 2 235 5.5E-61 T 21-04-2016 SDY_4342 c266d6bb4ba0f91c076ac717b70257b8 276 SUPERFAMILY SSF53098 65 229 1.08E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4342 c266d6bb4ba0f91c076ac717b70257b8 276 Pfam PF13276 HTH-like domain 5 47 4.8E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_4342 c266d6bb4ba0f91c076ac717b70257b8 276 Gene3D G3DSA:3.30.420.10 66 226 5.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3252 556a172ca73f3dc8c3e08dc340ade351 168 SUPERFAMILY SSF52141 2 163 5.23E-48 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_3252 556a172ca73f3dc8c3e08dc340ade351 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 2.6E-24 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_3252 556a172ca73f3dc8c3e08dc340ade351 168 Gene3D G3DSA:3.40.470.10 2 163 1.9E-58 T 21-04-2016 IPR005122 Uracil-DNA glycosylase-like SDY_3252 556a172ca73f3dc8c3e08dc340ade351 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 50.807 T 21-04-2016 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 SDY_3252 556a172ca73f3dc8c3e08dc340ade351 168 PANTHER PTHR12159 1 163 2.8E-70 T 21-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 21-04-2016 IPR019926 Ribosomal protein L3, conserved site SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.2E-92 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 Pfam PF00297 Ribosomal protein L3 27 182 1.0E-14 T 21-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 158 207 8.6E-9 T 21-04-2016 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 3 32 8.6E-9 T 21-04-2016 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:4.10.960.10 77 157 2.8E-35 T 21-04-2016 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 PANTHER PTHR11229 1 208 8.0E-124 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.756 T 21-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3496 4c31ca787dff2e8979a12d5731b91705 209 SUPERFAMILY SSF50447 1 208 8.65E-81 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_2270 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 4.0E-75 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_2270 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SMART SM01133 68 326 5.5E-42 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_2270 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 56 242 5.13E-66 T 21-04-2016 SDY_2270 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 270 344 5.13E-66 T 21-04-2016 SDY_2270 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Gene3D G3DSA:3.20.20.70 52 345 8.8E-101 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1977 b89972f7b70346a6ffd6915ae7d9e200 293 Pfam PF01435 Peptidase family M48 73 288 3.1E-39 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SDY_1977 b89972f7b70346a6ffd6915ae7d9e200 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.11 T 21-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SDY_1977 b89972f7b70346a6ffd6915ae7d9e200 293 PANTHER PTHR10120 1 287 4.3E-115 T 21-04-2016 SDY_1977 b89972f7b70346a6ffd6915ae7d9e200 293 Gene3D G3DSA:3.30.2010.10 69 156 4.4E-32 T 21-04-2016 SDY_1977 b89972f7b70346a6ffd6915ae7d9e200 293 PANTHER PTHR10120:SF19 1 287 4.3E-115 T 21-04-2016 SDY_1915 0d61334526dfac9eee2c4a8903135164 245 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 11 243 2.0E-137 T 21-04-2016 IPR020291 DNA modification protein Mom KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.158 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 Pfam PF00265 Thymidine kinase 2 186 1.7E-67 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 PANTHER PTHR11441 1 202 5.3E-86 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 SUPERFAMILY SSF57716 142 189 1.57E-16 T 21-04-2016 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 PIRSF PIRSF035805 1 199 5.5E-57 T 21-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 SUPERFAMILY SSF52540 1 141 2.66E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 Gene3D G3DSA:3.30.60.20 142 189 3.5E-20 T 21-04-2016 SDY_1290 288be25cbbb27d59d058fb2e177a663c 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 21-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 8.8E-57 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 SUPERFAMILY SSF52467 181 342 5.17E-58 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 9.9E-42 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 PANTHER PTHR18968 1 545 8.0E-265 T 21-04-2016 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 6.6E-215 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 2.4E-49 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 PANTHER PTHR18968:SF116 1 545 8.0E-265 T 21-04-2016 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Gene3D G3DSA:3.40.50.1220 183 334 1.2E-57 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 SUPERFAMILY SSF52518 357 546 9.11E-65 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Gene3D G3DSA:3.40.50.970 335 537 1.1E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 SUPERFAMILY SSF52518 1 174 7.48E-63 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_3980 c58a73595bd3e3205095dea9d7d6dd3c 548 Gene3D G3DSA:3.40.50.970 1 171 1.5E-72 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_0162 d34cd334036819de9cb38f07e1916088 234 PANTHER PTHR30545 1 232 6.5E-95 T 21-04-2016 SDY_0162 d34cd334036819de9cb38f07e1916088 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 1.4E-77 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein SDY_0162 d34cd334036819de9cb38f07e1916088 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.561 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein SDY_0162 d34cd334036819de9cb38f07e1916088 234 PANTHER PTHR30545:SF2 1 232 6.5E-95 T 21-04-2016 SDY_0162 d34cd334036819de9cb38f07e1916088 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 234 1.5E-105 T 21-04-2016 IPR005224 Sugar fermentation stimulation protein SDY_3764 9ba74f8d42484a9238af24cf720402ee 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 4.0E-54 T 21-04-2016 IPR009867 Protein of unknown function DUF1422 SDY_3764 9ba74f8d42484a9238af24cf720402ee 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 9.0E-65 T 21-04-2016 IPR009867 Protein of unknown function DUF1422 SDY_1474 405240a8ffc72659429b79276707b8e0 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 41.391 T 21-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SDY_1474 405240a8ffc72659429b79276707b8e0 252 PANTHER PTHR21089 16 251 1.2E-108 T 21-04-2016 SDY_1474 405240a8ffc72659429b79276707b8e0 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 3.1E-88 T 21-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SDY_1474 405240a8ffc72659429b79276707b8e0 252 PANTHER PTHR21089:SF5 16 251 1.2E-108 T 21-04-2016 SDY_1474 405240a8ffc72659429b79276707b8e0 252 SUPERFAMILY SSF51569 1 251 6.35E-83 T 21-04-2016 SDY_1474 405240a8ffc72659429b79276707b8e0 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 21-04-2016 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SDY_1474 405240a8ffc72659429b79276707b8e0 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 7.4E-70 T 21-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SDY_1474 405240a8ffc72659429b79276707b8e0 252 Gene3D G3DSA:3.20.20.70 1 251 5.1E-92 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 2.4E-25 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 SUPERFAMILY SSF51735 147 321 4.87E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 PANTHER PTHR11695:SF38 14 355 2.0E-117 T 21-04-2016 SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 PANTHER PTHR11695 14 355 2.0E-117 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 SUPERFAMILY SSF50129 3 184 5.66E-37 T 21-04-2016 IPR011032 GroES-like SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 Gene3D G3DSA:3.40.50.720 179 300 6.6E-32 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 Gene3D G3DSA:3.90.180.10 1 178 8.6E-42 T 21-04-2016 IPR011032 GroES-like SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 1.9E-28 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_1491 74e9f4e12e81c0a5a20777aa0c726431 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 21-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 Pfam PF08798 CRISPR associated protein 1 198 1.8E-42 T 21-04-2016 IPR010179 CRISPR-associated protein Cse3 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 SMART SM01101 1 198 3.5E-81 T 21-04-2016 IPR010179 CRISPR-associated protein Cse3 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 199 7.9E-81 T 21-04-2016 IPR010179 CRISPR-associated protein Cse3 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 SUPERFAMILY SSF117987 77 198 5.23E-26 T 21-04-2016 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 SUPERFAMILY SSF117987 1 65 2.88E-11 T 21-04-2016 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 Gene3D G3DSA:3.30.70.1200 2 73 7.0E-8 T 21-04-2016 SDY_2955 12f3be79be39f392eb6f42f8be73ef43 199 Gene3D G3DSA:3.30.70.1210 77 198 9.2E-24 T 21-04-2016 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 132 774 4.0E-165 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 SMART SM00965 56 107 1.6E-14 T 21-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 SUPERFAMILY SSF56935 117 774 3.67E-120 T 21-04-2016 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 Gene3D G3DSA:2.40.170.20 246 774 1.0E-119 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 63 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 Pfam PF07660 Secretin and TonB N terminus short domain 57 107 9.1E-10 T 21-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 Gene3D G3DSA:2.170.130.10 131 245 1.6E-31 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 757 774 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 PANTHER PTHR30442 13 771 4.2E-170 T 21-04-2016 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 Pfam PF00593 TonB dependent receptor 525 771 1.2E-26 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_4297 389ebd2fe1273de86d4465ddb8bc38aa 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 244 3.2E-19 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_3128 d8aeaa727e753818550816054e7105bd 165 Pfam PF10263 SprT-like family 20 163 9.9E-27 T 21-04-2016 IPR006640 SprT-like SDY_3128 d8aeaa727e753818550816054e7105bd 165 PANTHER PTHR38773 2 163 3.6E-94 T 21-04-2016 SDY_3128 d8aeaa727e753818550816054e7105bd 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.873 T 21-04-2016 IPR023483 Uncharacterised protein family SprT SDY_3128 d8aeaa727e753818550816054e7105bd 165 SMART SM00731 16 165 7.9E-62 T 21-04-2016 IPR006640 SprT-like SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 2.9E-182 T 21-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 Gene3D G3DSA:2.30.42.10 96 195 3.1E-10 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 SMART SM00228 115 186 0.16 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 SMART SM00228 211 280 4.0E-11 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 Pfam PF02163 Peptidase family M50 11 438 6.9E-89 T 21-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 SUPERFAMILY SSF50156 196 291 5.26E-17 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 Gene3D G3DSA:2.30.42.10 207 296 5.4E-19 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 276 1.3E-9 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 PANTHER PTHR22939 200 450 3.1E-107 T 21-04-2016 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 PANTHER PTHR22939:SF78 200 450 3.1E-107 T 21-04-2016 SDY_0192 7c8bbeea5496fff907e61dea0d4946d9 450 SUPERFAMILY SSF50156 86 194 4.07E-12 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Pfam PF02151 UvrB/uvrC motif 635 667 2.3E-6 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:3.30.2060.10 159 231 6.9E-11 T 21-04-2016 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 2.3E-9 T 21-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Pfam PF00271 Helicase conserved C-terminal domain 434 545 1.1E-18 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0827 257466682ffe5700bc778ae48c133ebf 673 PANTHER PTHR24029 1 672 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SUPERFAMILY SSF52540 3 415 3.0E-139 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:3.40.50.300 419 582 5.6E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SMART SM00490 460 546 3.8E-20 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SMART SM00487 9 425 6.3E-28 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 21-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.371 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SUPERFAMILY SSF46600 625 669 7.19E-11 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 21-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SUPERFAMILY SSF52540 459 581 1.07E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 SUPERFAMILY SSF52540 37 82 1.07E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:4.10.860.10 622 670 7.0E-18 T 21-04-2016 IPR001943 UVR domain GO:0005515 SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:3.40.50.300 278 338 1.2E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:3.40.50.300 388 408 1.2E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0827 257466682ffe5700bc778ae48c133ebf 673 Gene3D G3DSA:3.40.50.300 5 89 1.2E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2339 df38d121965adbadae71e197b6dda179 297 Gene3D G3DSA:3.90.1200.10 94 255 5.2E-8 T 21-04-2016 SDY_2339 df38d121965adbadae71e197b6dda179 297 Pfam PF01636 Phosphotransferase enzyme family 64 238 4.2E-6 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase SDY_2339 df38d121965adbadae71e197b6dda179 297 SUPERFAMILY SSF56112 3 270 3.06E-27 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_3789 d961107a21800335268c80d3597aa4ac 283 Gene3D G3DSA:1.10.10.60 165 221 2.4E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3789 d961107a21800335268c80d3597aa4ac 283 PANTHER PTHR11019:SF11 36 276 2.8E-75 T 21-04-2016 SDY_3789 d961107a21800335268c80d3597aa4ac 283 SUPERFAMILY SSF46689 222 273 2.87E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3789 d961107a21800335268c80d3597aa4ac 283 Pfam PF12833 Helix-turn-helix domain 191 270 3.4E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3789 d961107a21800335268c80d3597aa4ac 283 SMART SM00342 185 268 1.4E-30 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3789 d961107a21800335268c80d3597aa4ac 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_3789 d961107a21800335268c80d3597aa4ac 283 Gene3D G3DSA:1.10.10.60 222 274 9.9E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3789 d961107a21800335268c80d3597aa4ac 283 Gene3D G3DSA:2.60.120.10 46 118 1.5E-4 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_3789 d961107a21800335268c80d3597aa4ac 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3789 d961107a21800335268c80d3597aa4ac 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3789 d961107a21800335268c80d3597aa4ac 283 PANTHER PTHR11019 36 276 2.8E-75 T 21-04-2016 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PRINTS PR00690 Adhesin family signature 69 86 5.2E-8 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PRINTS PR00690 Adhesin family signature 196 217 5.2E-8 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PRINTS PR00690 Adhesin family signature 249 267 5.2E-8 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PRINTS PR00690 Adhesin family signature 56 69 5.2E-8 T 21-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 Gene3D G3DSA:3.40.50.1980 198 308 2.0E-31 T 21-04-2016 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PANTHER PTHR30477 4 294 1.2E-97 T 21-04-2016 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 PANTHER PTHR30477:SF1 4 294 1.2E-97 T 21-04-2016 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 SUPERFAMILY SSF53807 27 308 5.4E-74 T 21-04-2016 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 306 2.4E-57 T 21-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SDY_1144 a3cf85926d427c37a593cbbc5ec4fb11 310 Gene3D G3DSA:3.40.50.1980 16 197 9.7E-45 T 21-04-2016 SDY_0794 4588fac07f95a609edd91824b82986a0 609 SUPERFAMILY SSF56935 1 609 1.42E-99 T 21-04-2016 SDY_0794 4588fac07f95a609edd91824b82986a0 609 Gene3D G3DSA:2.170.130.10 1 28 1.8E-5 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0794 4588fac07f95a609edd91824b82986a0 609 PANTHER PTHR32552:SF8 1 327 1.6E-261 T 21-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SDY_0794 4588fac07f95a609edd91824b82986a0 609 PANTHER PTHR32552:SF8 346 609 1.6E-261 T 21-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SDY_0794 4588fac07f95a609edd91824b82986a0 609 PANTHER PTHR32552 1 327 1.6E-261 T 21-04-2016 SDY_0794 4588fac07f95a609edd91824b82986a0 609 Gene3D G3DSA:2.40.170.20 34 609 4.5E-147 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0794 4588fac07f95a609edd91824b82986a0 609 Pfam PF00593 TonB dependent receptor 363 607 9.6E-35 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0794 4588fac07f95a609edd91824b82986a0 609 PANTHER PTHR32552 346 609 1.6E-261 T 21-04-2016 SDY_1427 a1b9f03baf64ccb90db6348951d0673a 79 Pfam PF00589 Phage integrase family 6 59 2.5E-10 T 21-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_1427 a1b9f03baf64ccb90db6348951d0673a 79 Gene3D G3DSA:1.10.443.10 7 71 1.2E-15 T 21-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SDY_1427 a1b9f03baf64ccb90db6348951d0673a 79 SUPERFAMILY SSF56349 6 73 1.82E-15 T 21-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SDY_1427 a1b9f03baf64ccb90db6348951d0673a 79 PANTHER PTHR30349:SF36 7 79 8.8E-47 T 21-04-2016 SDY_1427 a1b9f03baf64ccb90db6348951d0673a 79 PANTHER PTHR30349 7 79 8.8E-47 T 21-04-2016 SDY_3612 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88659 200 283 4.11E-19 T 21-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PIRSF PIRSF000770 14 284 1.6E-33 T 21-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 SDY_3612 80fc84758c6f971322646c5516b8915f 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.487 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.89E-19 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.89E-19 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.89E-19 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.89E-19 T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 21-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 Pfam PF04542 Sigma-70 region 2 53 122 5.3E-17 T 21-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.10.10 224 282 9.4E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3612 80fc84758c6f971322646c5516b8915f 284 Pfam PF04545 Sigma-70, region 4 228 280 7.3E-17 T 21-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 PANTHER PTHR30376 2 283 2.5E-131 T 21-04-2016 SDY_3612 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.601.10 15 122 1.0E-33 T 21-04-2016 SDY_3612 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 7.4E-130 T 21-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88946 15 122 2.75E-38 T 21-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_3612 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.9E-35 T 21-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PANTHER PTHR24322 159 190 4.8E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PANTHER PTHR24322 16 143 4.8E-50 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 SUPERFAMILY SSF51735 10 249 3.31E-83 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.898652E-39 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.491532E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.491532E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.491532E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 Gene3D G3DSA:3.40.50.720 6 249 3.6E-86 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1838 b9f5d8464c860a1b8eaf9ba5d8442b1a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 8.9E-66 T 21-04-2016 SDY_1435 364558fdd1bd0759471b042deeda26f8 124 Gene3D G3DSA:3.30.1330.70 2 116 7.5E-40 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SDY_1435 364558fdd1bd0759471b042deeda26f8 124 Pfam PF05866 Endodeoxyribonuclease RusA 8 113 5.8E-18 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SDY_1435 364558fdd1bd0759471b042deeda26f8 124 PIRSF PIRSF001007 1 120 7.9E-52 T 21-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 SDY_1435 364558fdd1bd0759471b042deeda26f8 124 SUPERFAMILY SSF103084 1 114 3.92E-31 T 21-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SDY_1679 bb546fcf7dc0076d32797627b00ac371 127 Gene3D G3DSA:1.10.3100.10 9 127 1.2E-63 T 21-04-2016 IPR027910 YdiL-like domain SDY_1679 bb546fcf7dc0076d32797627b00ac371 127 SUPERFAMILY SSF47413 9 127 2.42E-49 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1679 bb546fcf7dc0076d32797627b00ac371 127 Pfam PF08965 Domain of unknown function (DUF1870) 10 127 4.3E-57 T 21-04-2016 IPR015060 Protein of unknown function DUF1870 SDY_4596 be7be37d72616f00094a6e53fa520f82 257 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 5 249 2.1E-109 T 21-04-2016 IPR008275 CoA enzyme activase SDY_4596 be7be37d72616f00094a6e53fa520f82 257 PANTHER PTHR32329 5 257 4.7E-124 T 21-04-2016 SDY_4596 be7be37d72616f00094a6e53fa520f82 257 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 249 4.9E-68 T 21-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type SDY_4596 be7be37d72616f00094a6e53fa520f82 257 SUPERFAMILY SSF53067 5 248 1.98E-32 T 21-04-2016 SDY_4596 be7be37d72616f00094a6e53fa520f82 257 Gene3D G3DSA:3.30.420.40 94 232 4.8E-46 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 Gene3D G3DSA:2.40.50.100 1 12 7.6E-16 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 Gene3D G3DSA:2.40.50.100 87 122 7.6E-16 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 1 289 2.6E-73 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 SUPERFAMILY SSF111369 1 214 2.62E-72 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 PANTHER PTHR30158 1 299 3.2E-247 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 Pfam PF00529 HlyD membrane-fusion protein of T1SS 81 274 2.1E-12 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 PANTHER PTHR30158:SF4 1 299 3.2E-247 T 21-04-2016 SDY_3442 9cb7a307c5c10a34ed58647a59ca4b7a 300 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 2 207 6.8E-11 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_3685 2167e467e9bb6711555b7d9d40201827 179 Pfam PF05137 Fimbrial assembly protein (PilN) 99 169 2.6E-8 T 21-04-2016 IPR007813 Fimbrial assembly PilN SDY_1390 74ebac5ccecc01082f8152b4324d2085 89 Gene3D G3DSA:2.40.50.70 21 89 1.1E-48 T 21-04-2016 IPR003189 Shiga-like toxin, beta subunit GO:0005576|GO:0019836 SDY_1390 74ebac5ccecc01082f8152b4324d2085 89 ProDom PD006042 SUBUNIT TOXIN B SHIGA VARIANT SHIGA-LIKE II VEROCYTOTOXIN B-SUBUNIT PRECURSOR 21 88 3.0E-35 T 21-04-2016 IPR003189 Shiga-like toxin, beta subunit GO:0005576|GO:0019836 SDY_1390 74ebac5ccecc01082f8152b4324d2085 89 SUPERFAMILY SSF50203 22 89 3.05E-39 T 21-04-2016 IPR008992 Enterotoxin GO:0009405 SDY_1390 74ebac5ccecc01082f8152b4324d2085 89 Pfam PF02258 Shiga-like toxin beta subunit 20 89 1.2E-53 T 21-04-2016 IPR003189 Shiga-like toxin, beta subunit GO:0005576|GO:0019836 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Gene3D G3DSA:3.40.50.980 13 147 1.1E-21 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 PANTHER PTHR24096 1 449 2.8E-236 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Gene3D G3DSA:3.30.300.30 353 447 1.0E-15 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 SUPERFAMILY SSF56801 8 449 1.96E-93 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Pfam PF00501 AMP-binding enzyme 12 355 5.8E-54 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 PANTHER PTHR24096:SF109 1 449 2.8E-236 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 443 4.8E-113 T 21-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Gene3D G3DSA:3.40.50.980 148 290 6.0E-24 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 446 37.307 T 21-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Gene3D G3DSA:2.30.38.10 291 350 2.7E-8 T 21-04-2016 SDY_2456 30ecd26feb6a4c44b4e676f6f32e1f35 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 424 1.2E-6 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SDY_4308 9571004c736917c6e7e684f99b325c9c 121 Gene3D G3DSA:1.10.10.60 18 102 6.0E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4308 9571004c736917c6e7e684f99b325c9c 121 SUPERFAMILY SSF46689 9 103 1.97E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4308 9571004c736917c6e7e684f99b325c9c 121 PANTHER PTHR37936 1 121 5.8E-47 T 21-04-2016 SDY_4308 9571004c736917c6e7e684f99b325c9c 121 Pfam PF01527 Transposase 8 87 2.4E-21 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 2.2E-115 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 PANTHER PTHR11819:SF125 2 470 6.0E-294 T 21-04-2016 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 PANTHER PTHR11819 2 470 6.0E-294 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 4.9E-228 T 21-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 21-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_3435 7c997a18657aedbf49ca2fda85c35f3c 483 Pfam PF00474 Sodium:solute symporter family 36 432 2.6E-142 T 21-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 Pfam PF00005 ABC transporter 359 509 1.5E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 Gene3D G3DSA:1.20.1560.10 13 325 5.6E-71 T 21-04-2016 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 PANTHER PTHR24221 3 582 0.0 T 21-04-2016 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 SUPERFAMILY SSF52540 332 580 1.04E-96 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 PANTHER PTHR24221:SF188 3 582 0.0 T 21-04-2016 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 SMART SM00382 368 555 1.4E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 Gene3D G3DSA:3.40.50.300 342 574 2.0E-86 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 Pfam PF00664 ABC transporter transmembrane region 27 297 3.6E-61 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 SUPERFAMILY SSF90123 8 325 3.53E-75 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_2344 bb4f3221a11faf89b813e5b68603aa1e 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.0E-275 T 21-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 SDY_4113 6609788837d78c761d5b66cc657b2393 276 PANTHER PTHR30043:SF1 3 273 1.2E-120 T 21-04-2016 SDY_4113 6609788837d78c761d5b66cc657b2393 276 Gene3D G3DSA:1.10.3720.10 77 275 3.0E-33 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4113 6609788837d78c761d5b66cc657b2393 276 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 33 275 6.5E-94 T 21-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 SDY_4113 6609788837d78c761d5b66cc657b2393 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 275 1.4E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4113 6609788837d78c761d5b66cc657b2393 276 PANTHER PTHR30043 3 273 1.2E-120 T 21-04-2016 SDY_4113 6609788837d78c761d5b66cc657b2393 276 SUPERFAMILY SSF161098 79 270 3.01E-36 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 SUPERFAMILY SSF52402 5 209 8.82E-76 T 21-04-2016 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 Gene3D G3DSA:3.40.50.620 244 253 9.9E-65 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 Gene3D G3DSA:3.40.50.620 2 210 9.9E-65 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 PANTHER PTHR23293 245 302 3.4E-99 T 21-04-2016 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 PANTHER PTHR23293 178 211 3.4E-99 T 21-04-2016 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 PANTHER PTHR23293 1 158 3.4E-99 T 21-04-2016 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 PIRSF PIRSF002936 1 302 2.8E-155 T 21-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.8E-168 T 21-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.5E-66 T 21-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SDY_2951 8a1f5dee919f21f618930a3d25de665f 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.235 T 21-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SDY_2813 802a622f16887530be1ab825e4ad3e5c 216 PIRSF PIRSF016938 1 205 4.1E-37 T 21-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 SDY_2813 802a622f16887530be1ab825e4ad3e5c 216 SUPERFAMILY SSF89069 1 66 1.44E-22 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SDY_2813 802a622f16887530be1ab825e4ad3e5c 216 PANTHER PTHR38104 1 216 4.1E-89 T 21-04-2016 SDY_2813 802a622f16887530be1ab825e4ad3e5c 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 5.6E-26 T 21-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal SDY_2813 802a622f16887530be1ab825e4ad3e5c 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 3.6E-37 T 21-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 PIRSF PIRSF004761 1 116 3.2E-36 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 1.7E-29 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 PANTHER PTHR34535 2 116 1.4E-97 T 21-04-2016 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 PANTHER PTHR34535:SF1 2 116 1.4E-97 T 21-04-2016 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 21-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SDY_2923 99eacf87188afd4438cd65cffb285f56 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.544 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_2923 99eacf87188afd4438cd65cffb285f56 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 5.1E-44 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 Pfam PF01649 Ribosomal protein S20 2 84 2.4E-28 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 SUPERFAMILY SSF46992 3 86 1.57E-31 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.208 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 Gene3D G3DSA:1.20.58.110 3 87 2.4E-32 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 PANTHER PTHR33398 2 87 2.8E-40 T 21-04-2016 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_0045 fb4da09f65b6c5940f6e07713a8e2d6f 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.2E-34 T 21-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 Pfam PF01553 Acyltransferase 54 180 2.8E-32 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 Gene3D G3DSA:3.40.1130.10 64 233 1.3E-15 T 21-04-2016 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 SUPERFAMILY SSF69593 2 240 1.03E-61 T 21-04-2016 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 PANTHER PTHR10434:SF20 1 245 7.1E-179 T 21-04-2016 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 SMART SM00563 67 182 2.2E-39 T 21-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.6E-52 T 21-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 SDY_3219 57017f81cbaaadc904514ec19d8462bf 245 PANTHER PTHR10434 1 245 7.1E-179 T 21-04-2016 SDY_0504 967801b7779041bbf293447293bb57a7 255 SUPERFAMILY SSF52540 1 212 1.18E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0504 967801b7779041bbf293447293bb57a7 255 Gene3D G3DSA:3.40.50.300 1 205 4.1E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0504 967801b7779041bbf293447293bb57a7 255 SMART SM00382 26 205 9.2E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0504 967801b7779041bbf293447293bb57a7 255 PANTHER PTHR24220:SF564 3 243 1.4E-146 T 21-04-2016 SDY_0504 967801b7779041bbf293447293bb57a7 255 PANTHER PTHR24220 3 243 1.4E-146 T 21-04-2016 SDY_0504 967801b7779041bbf293447293bb57a7 255 Pfam PF00005 ABC transporter 17 156 1.4E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0504 967801b7779041bbf293447293bb57a7 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SMART SM00028 141 174 470.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SMART SM00028 180 213 36.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SMART SM00028 107 140 390.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SMART SM00028 214 247 0.034 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SMART SM00028 69 102 59.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 Gene3D G3DSA:1.25.40.10 47 95 1.3E-4 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 Gene3D G3DSA:1.25.40.10 236 330 8.1E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 Gene3D G3DSA:1.25.40.10 112 235 2.0E-18 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 PANTHER PTHR23083 8 348 8.5E-44 T 21-04-2016 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SUPERFAMILY SSF48452 100 280 4.17E-18 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 Pfam PF14559 Tetratricopeptide repeat 191 246 1.2E-6 T 21-04-2016 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 SUPERFAMILY SSF48452 39 133 1.39E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1356 6d2a227080694721e8f367f51a82cec2 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.981 T 21-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.6E-134 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 PANTHER PTHR30474 24 414 4.0E-190 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 PANTHER PTHR30474:SF2 24 414 4.0E-190 T 21-04-2016 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.309 T 21-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SDY_0119 80169ac40b04644e64f19b23f346f32f 414 Pfam PF01098 Cell cycle protein 47 402 4.1E-131 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SDY_0020 7d53ea8cc073b6d0ca2a051f83b1903d 175 SUPERFAMILY SSF49401 25 30 1.19E-9 T 21-04-2016 IPR008966 Adhesion domain SDY_0020 7d53ea8cc073b6d0ca2a051f83b1903d 175 SUPERFAMILY SSF49401 58 175 1.19E-9 T 21-04-2016 IPR008966 Adhesion domain SDY_0020 7d53ea8cc073b6d0ca2a051f83b1903d 175 Gene3D G3DSA:2.60.40.1090 38 175 1.3E-8 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_1181 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Pfam PF03811 InsA N-terminal domain 2 36 8.7E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1181 0d9846d9d6d6f9e8e02047c6bed8e69d 91 PANTHER PTHR33293 2 91 9.4E-34 T 21-04-2016 SDY_1181 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1181 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2763 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Pfam PF03811 InsA N-terminal domain 2 36 8.7E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2763 0d9846d9d6d6f9e8e02047c6bed8e69d 91 PANTHER PTHR33293 2 91 9.4E-34 T 21-04-2016 SDY_2763 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2763 0d9846d9d6d6f9e8e02047c6bed8e69d 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2334 3015500feaf8a639eaed17293674c828 1483 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 7.4E-15 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.37 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PIRSF PIRSF005246 1 1483 0.0 T 21-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 SDY_2334 3015500feaf8a639eaed17293674c828 1483 Pfam PF16330 MukB hinge domain 645 810 2.6E-72 T 21-04-2016 IPR032520 MukB, hinge domain SDY_2334 3015500feaf8a639eaed17293674c828 1483 Gene3D G3DSA:3.40.1140.10 1 226 8.2E-51 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 SUPERFAMILY SSF52540 21 55 1.45E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2334 3015500feaf8a639eaed17293674c828 1483 SUPERFAMILY SSF52540 1268 1433 1.45E-6 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2334 3015500feaf8a639eaed17293674c828 1483 Pfam PF04310 MukB N-terminal 2 227 1.7E-124 T 21-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 SDY_2334 3015500feaf8a639eaed17293674c828 1483 SUPERFAMILY SSF52540 22 224 2.31E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 847 878 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 99 426 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 560 814 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 1426 1459 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 897 938 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 977 1116 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 444 529 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937 1212 1248 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 847 878 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 99 426 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 560 814 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 1426 1459 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 897 938 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 977 1116 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 444 529 0.0 T 21-04-2016 SDY_2334 3015500feaf8a639eaed17293674c828 1483 PANTHER PTHR18937:SF201 1212 1248 0.0 T 21-04-2016 SDY_0936 aa9bc9b4dd12afbf51ab656017c2ffb6 148 Pfam PF03733 Inner membrane component domain 77 127 6.2E-17 T 21-04-2016 IPR005185 Inner membrane component domain SDY_0936 aa9bc9b4dd12afbf51ab656017c2ffb6 148 Pfam PF03733 Inner membrane component domain 4 53 3.2E-9 T 21-04-2016 IPR005185 Inner membrane component domain SDY_0936 aa9bc9b4dd12afbf51ab656017c2ffb6 148 PIRSF PIRSF028777 1 139 5.3E-54 T 21-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 SDY_0936 aa9bc9b4dd12afbf51ab656017c2ffb6 148 PANTHER PTHR31503 1 148 7.4E-64 T 21-04-2016 SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 SUPERFAMILY SSF51735 6 253 2.16E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PIRSF PIRSF000094 1 260 3.0E-125 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PANTHER PTHR24322:SF317 159 191 2.5E-67 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PANTHER PTHR24322:SF317 11 143 2.5E-67 T 21-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 7.0E-85 T 21-04-2016 SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PANTHER PTHR24322 159 191 2.5E-67 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PANTHER PTHR24322 11 143 2.5E-67 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1368 962f7ed05ad81725ed180ea511bece3d 262 Gene3D G3DSA:3.40.50.720 2 253 5.0E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3273 bf291a3d4c75e741460ed465c12f7f11 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 311 2.3E-119 T 21-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SDY_3273 bf291a3d4c75e741460ed465c12f7f11 321 PANTHER PTHR30238:SF0 5 319 2.3E-158 T 21-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SDY_3273 bf291a3d4c75e741460ed465c12f7f11 321 PANTHER PTHR30238 5 319 2.3E-158 T 21-04-2016 SDY_3273 bf291a3d4c75e741460ed465c12f7f11 321 Pfam PF03741 Integral membrane protein TerC family 80 282 1.1E-55 T 21-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SDY_3680 25045ba568c5c4be41ae5725533548f3 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 21-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 SDY_3680 25045ba568c5c4be41ae5725533548f3 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 21-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 281 306 2.6E-6 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 336 362 2.3E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 310 334 1.6E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 127 150 2.1E-4 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 268 291 5.4E-6 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 240 264 4.4E-6 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 294 320 4.1E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 113 139 4.5E-5 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05658 Head domain of trimeric autotransporter adhesin 211 236 5.8E-8 T 21-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_4033 505049b957381eceb630b123495a6911 399 SUPERFAMILY SSF101967 241 392 1.7E-34 T 21-04-2016 SDY_4033 505049b957381eceb630b123495a6911 399 Gene3D G3DSA:2.150.10.10 208 392 1.4E-47 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4033 505049b957381eceb630b123495a6911 399 Gene3D G3DSA:2.150.10.10 66 207 8.9E-23 T 21-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.1E-9 T 21-04-2016 IPR024973 ESPR domain SDY_4033 505049b957381eceb630b123495a6911 399 SUPERFAMILY SSF101967 66 181 2.62E-13 T 21-04-2016 SDY_4033 505049b957381eceb630b123495a6911 399 PANTHER PTHR35843:SF2 1 331 1.9E-24 T 21-04-2016 SDY_4033 505049b957381eceb630b123495a6911 399 SUPERFAMILY SSF101967 151 240 9.29E-15 T 21-04-2016 SDY_4033 505049b957381eceb630b123495a6911 399 PANTHER PTHR35843 1 331 1.9E-24 T 21-04-2016 SDY_4033 505049b957381eceb630b123495a6911 399 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 365 388 1.7E-7 T 21-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 SDY_2844a 451a8428bd92d13904574d2bc65b919c 53 Pfam PF01848 Hok/gef family 8 48 3.4E-16 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_2844a 451a8428bd92d13904574d2bc65b919c 53 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 6 50 9.0E-16 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_2844a 451a8428bd92d13904574d2bc65b919c 53 PRINTS PR00281 Hok/Gef cell toxic protein family signature 27 49 2.4E-15 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_2844a 451a8428bd92d13904574d2bc65b919c 53 PRINTS PR00281 Hok/Gef cell toxic protein family signature 7 25 2.4E-15 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_1736 d63693131045d2fc316fad652ac29efd 145 Gene3D G3DSA:1.10.260.40 95 142 7.6E-6 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1736 d63693131045d2fc316fad652ac29efd 145 SUPERFAMILY SSF143100 7 71 3.01E-16 T 21-04-2016 SDY_1736 d63693131045d2fc316fad652ac29efd 145 SUPERFAMILY SSF47413 89 143 9.65E-6 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1736 d63693131045d2fc316fad652ac29efd 145 Pfam PF01381 Helix-turn-helix 95 141 3.9E-7 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1736 d63693131045d2fc316fad652ac29efd 145 SMART SM00530 88 143 4.7E-4 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1736 d63693131045d2fc316fad652ac29efd 145 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 10 74 2.2E-7 T 21-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 PANTHER PTHR11113:SF2 17 362 1.3E-227 T 21-04-2016 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 PANTHER PTHR11113:SF2 396 574 1.3E-227 T 21-04-2016 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 TIGRFAM TIGR01178 ade: adenine deaminase 31 580 1.4E-248 T 21-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 Gene3D G3DSA:2.30.40.10 31 125 1.4E-15 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 SUPERFAMILY SSF51338 329 350 8.21E-15 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 SUPERFAMILY SSF51338 22 85 8.21E-15 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 PANTHER PTHR11113 17 362 1.3E-227 T 21-04-2016 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 PANTHER PTHR11113 396 574 1.3E-227 T 21-04-2016 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 SUPERFAMILY SSF51556 85 329 4.99E-26 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 Gene3D G3DSA:3.20.20.140 292 352 4.4E-7 T 21-04-2016 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 Pfam PF01979 Amidohydrolase family 82 358 2.6E-27 T 21-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 Hamap MF_01518 Adenine deaminase [ade]. 31 579 35.238 T 21-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SDY_4146 23c387cf0f5e4f21e0f9929d0dc3fe1f 584 Pfam PF13382 Adenine deaminase C-terminal domain 430 575 5.4E-56 T 21-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF07840 FadR C-terminal domain 72 234 5.1E-73 T 21-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 SMART SM00345 12 71 5.9E-23 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 PANTHER PTHR11751 13 97 1.7E-58 T 21-04-2016 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF48008 79 230 5.75E-65 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.6E-20 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 1.1E-123 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.20.120.530 80 236 8.9E-69 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 PANTHER PTHR11751:SF402 13 97 1.7E-58 T 21-04-2016 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.307 T 21-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.10.10.10 8 76 3.2E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1224 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF46785 11 88 2.48E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PANTHER PTHR11410 1 122 1.9E-112 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PANTHER PTHR11410 138 271 1.9E-112 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 21-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 15.998 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 SUPERFAMILY SSF81336 95 265 7.32E-50 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 Pfam PF00119 ATP synthase A chain 47 265 2.0E-55 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PANTHER PTHR11410:SF7 1 122 1.9E-112 T 21-04-2016 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PANTHER PTHR11410:SF7 138 271 1.9E-112 T 21-04-2016 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 4.4E-43 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_4010 6b1207edc657da6542c372273cb9ffd6 271 Gene3D G3DSA:1.20.120.220 96 271 9.9E-59 T 21-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 PANTHER PTHR11587:SF2 1 425 4.8E-177 T 21-04-2016 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 1.1E-169 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 SUPERFAMILY SSF69864 190 444 1.83E-80 T 21-04-2016 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 77.807 T 21-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 Gene3D G3DSA:3.90.1260.10 175 372 3.1E-63 T 21-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 PANTHER PTHR11587 1 425 4.8E-177 T 21-04-2016 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 Gene3D G3DSA:1.10.287.400 377 440 5.7E-35 T 21-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 SUPERFAMILY SSF52402 3 186 6.05E-35 T 21-04-2016 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 Pfam PF00764 Arginosuccinate synthase 16 410 1.1E-56 T 21-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 21-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3351 19442fab5187afbf38c1b3bef4b88596 447 Gene3D G3DSA:3.40.50.620 4 174 5.8E-44 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 2.6E-130 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 PANTHER PTHR21299:SF1 3 282 2.7E-140 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 Gene3D G3DSA:3.30.1300.10 181 282 2.2E-30 T 21-04-2016 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 1.1E-7 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.053 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 9.3E-103 T 21-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 Gene3D G3DSA:3.40.50.620 3 176 3.9E-78 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 SUPERFAMILY SSF52374 3 281 5.09E-107 T 21-04-2016 SDY_0155 89f9ae55a1745f318b0c0b7701e5e5d7 283 PANTHER PTHR21299 3 282 2.7E-140 T 21-04-2016 SDY_3143 74c594060f96918987acc706b03c5830 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3143 74c594060f96918987acc706b03c5830 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 4.8E-28 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3143 74c594060f96918987acc706b03c5830 147 Gene3D G3DSA:3.40.930.10 1 146 2.3E-49 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3143 74c594060f96918987acc706b03c5830 147 SUPERFAMILY SSF55804 1 145 1.83E-33 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_3143 74c594060f96918987acc706b03c5830 147 PANTHER PTHR36203 1 146 6.5E-65 T 21-04-2016 SDY_1871 83da8cf2afe0e309da3f354138c35470 298 SUPERFAMILY SSF51430 4 295 3.8E-71 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1871 83da8cf2afe0e309da3f354138c35470 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.0E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_1871 83da8cf2afe0e309da3f354138c35470 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 6.0E-6 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_1871 83da8cf2afe0e309da3f354138c35470 298 Gene3D G3DSA:3.20.20.100 2 292 2.3E-64 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1871 83da8cf2afe0e309da3f354138c35470 298 PANTHER PTHR11732 2 298 3.2E-169 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_1871 83da8cf2afe0e309da3f354138c35470 298 Pfam PF00248 Aldo/keto reductase family 18 291 1.3E-57 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1871 83da8cf2afe0e309da3f354138c35470 298 PANTHER PTHR11732:SF10 2 298 3.2E-169 T 21-04-2016 SDY_2501 19fdc60e58974315b5948061660b9322 297 SUPERFAMILY SSF51735 1 296 6.13E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2501 19fdc60e58974315b5948061660b9322 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 2.2E-22 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SDY_2501 19fdc60e58974315b5948061660b9322 297 Gene3D G3DSA:3.40.50.720 1 198 2.1E-23 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2501 19fdc60e58974315b5948061660b9322 297 PANTHER PTHR11092:SF0 1 297 2.7E-154 T 21-04-2016 SDY_2501 19fdc60e58974315b5948061660b9322 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 4.1E-19 T 21-04-2016 IPR013549 Domain of unknown function DUF1731 SDY_2501 19fdc60e58974315b5948061660b9322 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 6.0E-109 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 SDY_2501 19fdc60e58974315b5948061660b9322 297 Gene3D G3DSA:3.90.25.10 199 248 3.3E-5 T 21-04-2016 SDY_2501 19fdc60e58974315b5948061660b9322 297 PANTHER PTHR11092 1 297 2.7E-154 T 21-04-2016 IPR010099 Epimerase family protein SDR39U1 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 Pfam PF02272 DHHA1 domain 800 868 6.5E-17 T 21-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 SMART SM00863 653 696 7.6E-22 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 SUPERFAMILY SSF50447 455 551 9.18E-21 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PANTHER PTHR11777:SF9 1 876 0.0 T 21-04-2016 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 Pfam PF01411 tRNA synthetases class II (A) 7 556 7.1E-241 T 21-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 8.6E-18 T 21-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 SUPERFAMILY SSF55681 4 255 1.04E-108 T 21-04-2016 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 PANTHER PTHR11777 1 876 0.0 T 21-04-2016 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 Gene3D G3DSA:3.30.930.10 4 251 2.6E-128 T 21-04-2016 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 209.93 T 21-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 SUPERFAMILY SSF101353 256 465 6.28E-62 T 21-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 21-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SDY_2893 564a0029a44078d6efcfc97fe9e2cce3 876 SUPERFAMILY SSF55186 552 708 1.57E-52 T 21-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 SUPERFAMILY SSF53623 95 297 4.84E-58 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 SUPERFAMILY SSF51984 3 94 3.14E-25 T 21-04-2016 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 8.8E-131 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 PANTHER PTHR23135 1 437 1.1E-178 T 21-04-2016 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 35.137 T 21-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Gene3D G3DSA:3.90.190.20 300 433 1.3E-44 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Gene3D G3DSA:3.40.1190.10 94 299 9.3E-69 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Gene3D G3DSA:3.40.50.720 3 92 1.6E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Pfam PF08245 Mur ligase middle domain 110 280 4.8E-29 T 21-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 PANTHER PTHR23135:SF2 1 437 1.1E-178 T 21-04-2016 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 370 2.9E-10 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_0118 506d62b725bb5c7b8be79dce38281c18 438 SUPERFAMILY SSF53244 299 437 2.29E-54 T 21-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF47323 642 899 5.61E-70 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF52374 364 571 1.29E-136 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF52374 1 192 1.29E-136 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF52374 609 641 1.29E-136 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:3.90.740.10 194 360 3.5E-47 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 4.1E-35 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 4.1E-35 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 4.1E-35 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 4.1E-35 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 4.1E-35 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:1.10.730.10 631 816 2.3E-64 T 21-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF46589 884 947 6.8E-16 T 21-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.4E-227 T 21-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946:SF5 608 860 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946:SF5 1 570 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946:SF5 880 947 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:3.40.50.620 609 630 2.5E-141 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:3.40.50.620 364 571 2.5E-141 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:3.40.50.620 3 193 2.5E-141 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.145 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 SUPERFAMILY SSF50677 191 365 7.46E-56 T 21-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Gene3D G3DSA:1.10.287.380 878 933 7.4E-6 T 21-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946 608 860 0.0 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946 1 570 0.0 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 PANTHER PTHR11946 880 947 0.0 T 21-04-2016 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 4.9E-16 T 21-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 8.1E-42 T 21-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SDY_4282 f65d1087f28e2fff58e60888400f2da6 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 21-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PANTHER PTHR32063:SF13 1 1038 0.0 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:3.30.2090.10 722 810 9.6E-23 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 38 132 3.3E-28 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 21-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PANTHER PTHR32063 1 1038 0.0 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:3.30.70.1430 38 139 5.2E-37 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:3.30.70.1430 567 670 2.8E-36 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 8.7E-112 T 21-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:1.10.3850.10 815 1028 1.8E-54 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:1.10.3850.10 279 498 2.3E-57 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82714 723 810 1.44E-18 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 Gene3D G3DSA:3.30.2090.10 181 275 3.9E-25 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 672 722 8.89E-24 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 809 857 8.89E-24 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 565 669 3.61E-29 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82866 834 1026 7.46E-44 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82866 296 497 5.36E-47 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 135 182 2.35E-26 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82693 274 330 2.35E-26 T 21-04-2016 SDY_3537 a3ba88600191413d71470d1e72d8bb9f 1039 SUPERFAMILY SSF82714 182 272 1.44E-20 T 21-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SDY_3956 436cebbfd43550ea0f294ff2a46b83a2 416 PANTHER PTHR30250:SF9 3 415 1.2E-179 T 21-04-2016 SDY_3956 436cebbfd43550ea0f294ff2a46b83a2 416 PANTHER PTHR30250 3 415 1.2E-179 T 21-04-2016 SDY_3956 436cebbfd43550ea0f294ff2a46b83a2 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 8.3E-9 T 21-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SDY_3956 436cebbfd43550ea0f294ff2a46b83a2 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.99 T 21-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 Gene3D G3DSA:3.40.50.1950 1 185 7.5E-82 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 37.47 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 Pfam PF02441 Flavoprotein 1 128 2.3E-25 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 53.284 T 21-04-2016 IPR032901 Probable UbiX-like flavin prenyltransferase SDY_2938 34def157511124bb35ceb8fc254aa06b 197 SUPERFAMILY SSF52507 1 185 1.96E-65 T 21-04-2016 IPR003382 Flavoprotein GO:0003824 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 5.2E-74 T 21-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 PANTHER PTHR30108:SF2 1 197 7.4E-94 T 21-04-2016 SDY_2938 34def157511124bb35ceb8fc254aa06b 197 PANTHER PTHR30108 1 197 7.4E-94 T 21-04-2016 SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 PANTHER PTHR39455 1 247 2.2E-124 T 21-04-2016 SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 Gene3D G3DSA:2.60.440.10 174 247 5.7E-36 T 21-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 33.046 T 21-04-2016 IPR009777 Cell division protein ZapD SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 PANTHER PTHR39455:SF1 1 247 2.2E-124 T 21-04-2016 SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 6.8E-79 T 21-04-2016 IPR009777 Cell division protein ZapD SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 Gene3D G3DSA:1.10.3900.10 13 173 1.1E-67 T 21-04-2016 SDY_0132 9a4e7a0fdc339b2d8279210aa47ea3c1 247 SUPERFAMILY SSF160950 4 247 2.48E-93 T 21-04-2016 SDY_0058 930d63e798cbee52498d62c8479466af 297 PANTHER PTHR11941 29 294 2.9E-104 T 21-04-2016 SDY_0058 930d63e798cbee52498d62c8479466af 297 Gene3D G3DSA:1.10.12.10 236 297 2.3E-20 T 21-04-2016 IPR014748 Crontonase, C-terminal SDY_0058 930d63e798cbee52498d62c8479466af 297 Pfam PF00378 Enoyl-CoA hydratase/isomerase 45 296 1.2E-83 T 21-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SDY_0058 930d63e798cbee52498d62c8479466af 297 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 134 154 - T 21-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SDY_0058 930d63e798cbee52498d62c8479466af 297 PANTHER PTHR11941:SF13 29 294 2.9E-104 T 21-04-2016 SDY_0058 930d63e798cbee52498d62c8479466af 297 SUPERFAMILY SSF52096 35 297 3.52E-76 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0058 930d63e798cbee52498d62c8479466af 297 Gene3D G3DSA:3.90.226.10 36 232 2.9E-64 T 21-04-2016 IPR029045 ClpP/crotonase-like domain SDY_0058 930d63e798cbee52498d62c8479466af 297 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 37 297 72.435 T 21-04-2016 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 UniPathway: UPA00117 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 4.2E-138 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 535 3.5E-9 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Gene3D G3DSA:3.40.50.970 7 175 9.8E-44 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Gene3D G3DSA:3.40.50.970 346 547 2.1E-31 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 SUPERFAMILY SSF52518 367 552 3.93E-34 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 SUPERFAMILY SSF52518 7 175 2.25E-31 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 PANTHER PTHR18968:SF114 1 554 1.1E-232 T 21-04-2016 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 141 5.4E-27 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 PIRSF PIRSF004983 1 556 3.0E-184 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 PANTHER PTHR18968 1 554 1.1E-232 T 21-04-2016 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.449 T 21-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2460 c6f294dd0c906cf0fbe0e185c59e8e67 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 1.5E-84 T 21-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 PANTHER PTHR26402 4 205 3.4E-153 T 21-04-2016 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.521 T 21-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:3.40.50.2300 1 125 8.3E-21 T 21-04-2016 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 PANTHER PTHR26402:SF510 4 205 3.4E-153 T 21-04-2016 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00421 148 205 4.2E-16 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:1.10.10.10 126 207 4.4E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00448 4 120 3.8E-15 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0857 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-18 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 SUPERFAMILY SSF102114 6 444 4.12E-148 T 21-04-2016 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 1.4E-243 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 Pfam PF04055 Radical SAM superfamily 57 226 1.0E-17 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 SMART SM00729 52 272 9.0E-58 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 PANTHER PTHR13932 1 451 9.8E-278 T 21-04-2016 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 Gene3D G3DSA:3.80.30.20 53 283 4.0E-32 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 Gene3D G3DSA:1.10.10.10 407 441 7.8E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 PIRSF PIRSF000167 3 454 2.3E-182 T 21-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 Pfam PF06969 HemN C-terminal domain 363 431 8.7E-8 T 21-04-2016 IPR010723 HemN, C-terminal SDY_3876 ba35f2b4fd5097172f38a935b5f42d6e 457 PANTHER PTHR13932:SF6 1 451 9.8E-278 T 21-04-2016 SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 PANTHER PTHR30619 3 749 8.0E-257 T 21-04-2016 SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 405 1.2E-62 T 21-04-2016 IPR004477 ComEC/Rec2-related protein SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 Pfam PF03772 Competence protein 201 467 5.8E-53 T 21-04-2016 IPR004477 ComEC/Rec2-related protein SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 684 4.7E-18 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 SUPERFAMILY SSF56281 495 742 1.15E-45 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 SMART SM00849 508 689 4.2E-8 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 PANTHER PTHR30619:SF2 3 749 8.0E-257 T 21-04-2016 SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 65 718 0.0 T 21-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SDY_2345 5a6504ea191c6dd752bfe1475c7a047e 754 Gene3D G3DSA:3.60.15.10 472 683 4.5E-32 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_4806 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293 1 89 2.9E-18 T 21-04-2016 SDY_4806 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4806 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF03811 InsA N-terminal domain 1 35 4.3E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4806 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293:SF2 1 89 2.9E-18 T 21-04-2016 SDY_0365a 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293 1 89 2.9E-18 T 21-04-2016 SDY_0365a 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0365a 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF03811 InsA N-terminal domain 1 35 4.3E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0365a 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293:SF2 1 89 2.9E-18 T 21-04-2016 SDY_0642a 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293 1 89 2.9E-18 T 21-04-2016 SDY_0642a 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0642a 02d6a038d9535cfe416c4086e014f61a 90 Pfam PF03811 InsA N-terminal domain 1 35 4.3E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0642a 02d6a038d9535cfe416c4086e014f61a 90 PANTHER PTHR33293:SF2 1 89 2.9E-18 T 21-04-2016 SDY_1984 884efd4e2e180fea8a9d3067192e78b1 145 PANTHER PTHR30462:SF1 1 145 2.1E-88 T 21-04-2016 SDY_1984 884efd4e2e180fea8a9d3067192e78b1 145 PANTHER PTHR30462 1 145 2.1E-88 T 21-04-2016 SDY_1984 884efd4e2e180fea8a9d3067192e78b1 145 Pfam PF04403 Paraquat-inducible protein A 1 136 1.2E-36 T 21-04-2016 IPR007498 Paraquat-inducible protein A SDY_3724 a7752b48d74bdf1f50ad1b77ac143583 139 Gene3D G3DSA:1.20.58.60 46 108 1.9E-4 T 21-04-2016 SDY_3724 a7752b48d74bdf1f50ad1b77ac143583 139 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 1 119 2.0E-56 T 21-04-2016 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 SDY_3724 a7752b48d74bdf1f50ad1b77ac143583 139 Pfam PF13801 Heavy-metal resistance 9 120 1.2E-20 T 21-04-2016 IPR025961 Heavy-metal resistance protein SDY_3724 a7752b48d74bdf1f50ad1b77ac143583 139 SUPERFAMILY SSF46966 46 113 1.73E-5 T 21-04-2016 SDY_0799 c8d8fc2bd8959c90d9d1770e5f8c1016 320 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 1.5E-10 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_0799 c8d8fc2bd8959c90d9d1770e5f8c1016 320 Gene3D G3DSA:3.40.1030.10 80 319 5.8E-41 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_0799 c8d8fc2bd8959c90d9d1770e5f8c1016 320 Gene3D G3DSA:1.20.970.10 7 69 6.2E-19 T 21-04-2016 SDY_0799 c8d8fc2bd8959c90d9d1770e5f8c1016 320 SUPERFAMILY SSF52418 75 319 6.28E-48 T 21-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SDY_0799 c8d8fc2bd8959c90d9d1770e5f8c1016 320 SUPERFAMILY SSF47648 7 72 1.7E-14 T 21-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 Gene3D G3DSA:3.40.47.10 1 160 2.5E-65 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 SUPERFAMILY SSF53901 3 317 9.02E-72 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 7.3E-152 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.4E-37 T 21-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.8E-29 T 21-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 PANTHER PTHR18919:SF109 26 317 1.7E-128 T 21-04-2016 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.47 T 21-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 PANTHER PTHR18919 26 317 1.7E-128 T 21-04-2016 SDY_2059 b72897ca02447bae85b5d82ebe2378e1 317 Gene3D G3DSA:3.40.47.10 161 316 8.2E-53 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 PANTHER PTHR13748:SF43 1 279 6.9E-106 T 21-04-2016 SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 SUPERFAMILY SSF90002 190 281 3.14E-25 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 PANTHER PTHR13748 1 279 6.9E-106 T 21-04-2016 SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 Gene3D G3DSA:3.40.50.300 1 167 2.6E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 1 148 1.3E-33 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 190 281 2.2E-18 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 SMART SM00833 190 283 2.0E-10 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 SUPERFAMILY SSF52540 1 167 7.68E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4605 0bb3d19a315bd4c2cd3dc4b6fffc7a31 284 Gene3D G3DSA:3.30.1220.10 174 281 1.6E-31 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.8E-123 T 21-04-2016 IPR005218 Diacylglycerol/lipid kinase SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 SMART SM00046 6 132 1.7E-37 T 21-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 4.8E-142 T 21-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 PANTHER PTHR12358 22 299 9.1E-62 T 21-04-2016 SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 48.564 T 21-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 SUPERFAMILY SSF111331 8 297 1.81E-67 T 21-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SDY_2261 2f3c39d81a93d47a4d0467565b0e76f2 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 1.4E-27 T 21-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-38 T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 SUPERFAMILY SSF47060 3 89 1.71E-35 T 21-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 SMART SM01387 8 88 1.8E-52 T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.7E-41 T 21-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 21-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-40 T 21-04-2016 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.443 T 21-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 PANTHER PTHR23321 1 89 5.1E-49 T 21-04-2016 SDY_3344 85d82584bc67014d3c63ee6ceabd5751 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-39 T 21-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SDY_4586 0d253872f84992783116c6755bdd74e9 254 Gene3D G3DSA:3.30.420.10 66 226 4.2E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4586 0d253872f84992783116c6755bdd74e9 254 PANTHER PTHR32552 2 235 4.2E-63 T 21-04-2016 SDY_4586 0d253872f84992783116c6755bdd74e9 254 SUPERFAMILY SSF53098 65 229 8.5E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4586 0d253872f84992783116c6755bdd74e9 254 Pfam PF13276 HTH-like domain 8 47 1.9E-8 T 21-04-2016 IPR025948 HTH-like domain SDY_4586 0d253872f84992783116c6755bdd74e9 254 Pfam PF00665 Integrase core domain 72 186 5.0E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 Gene3D G3DSA:3.30.1240.10 82 176 2.5E-17 T 21-04-2016 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 PANTHER PTHR10000:SF20 1 266 3.2E-146 T 21-04-2016 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 21-04-2016 IPR000150 Cof protein GO:0016787 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 Gene3D G3DSA:3.40.50.1000 177 265 2.1E-56 T 21-04-2016 IPR023214 HAD-like domain SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 Gene3D G3DSA:3.40.50.1000 1 72 2.1E-56 T 21-04-2016 IPR023214 HAD-like domain SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 21-04-2016 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.8E-70 T 21-04-2016 IPR000150 Cof protein GO:0016787 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 9.4E-63 T 21-04-2016 IPR023214 HAD-like domain SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 PANTHER PTHR10000 1 266 3.2E-146 T 21-04-2016 SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 SUPERFAMILY SSF56784 1 264 2.94E-68 T 21-04-2016 IPR023214 HAD-like domain SDY_3917 a711ef6e19b058e0210f3a5161356c2d 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.8E-26 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 SUPERFAMILY SSF103473 3 342 1.15E-46 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 Pfam PF07690 Major Facilitator Superfamily 4 279 1.1E-27 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 Gene3D G3DSA:1.20.1250.20 2 151 5.8E-21 T 21-04-2016 SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 Gene3D G3DSA:1.20.1250.20 163 343 1.8E-12 T 21-04-2016 SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 PANTHER PTHR23501:SF89 1 352 3.4E-233 T 21-04-2016 SDY_1599 fa36d4ac467751d1e8c789b81ad93ba9 352 PANTHER PTHR23501 1 352 3.4E-233 T 21-04-2016 SDY_2037 712562c9f80420200d56bde183628e2c 320 PANTHER PTHR30582 56 317 1.5E-215 T 21-04-2016 SDY_2037 712562c9f80420200d56bde183628e2c 320 PANTHER PTHR30582:SF9 56 317 1.5E-215 T 21-04-2016 SDY_2037 712562c9f80420200d56bde183628e2c 320 Gene3D G3DSA:2.40.440.10 96 242 3.3E-34 T 21-04-2016 SDY_2037 712562c9f80420200d56bde183628e2c 320 SMART SM00257 45 91 2.9E-7 T 21-04-2016 IPR018392 LysM domain SDY_2037 712562c9f80420200d56bde183628e2c 320 SUPERFAMILY SSF141523 101 240 3.14E-28 T 21-04-2016 SDY_2037 712562c9f80420200d56bde183628e2c 320 Pfam PF01476 LysM domain 47 91 8.9E-7 T 21-04-2016 IPR018392 LysM domain SDY_2037 712562c9f80420200d56bde183628e2c 320 Gene3D G3DSA:3.10.350.10 53 91 1.2E-6 T 21-04-2016 IPR018392 LysM domain SDY_2037 712562c9f80420200d56bde183628e2c 320 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 1.9E-19 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 41.41 T 21-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 271 3.8E-113 T 21-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PANTHER PTHR11451:SF35 4 236 4.2E-123 T 21-04-2016 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PANTHER PTHR11451 4 236 4.2E-123 T 21-04-2016 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 5.5E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 5.5E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 5.5E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 5.5E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 5.5E-14 T 21-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 SUPERFAMILY SSF52374 6 283 5.91E-87 T 21-04-2016 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 274 1.3E-47 T 21-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 Gene3D G3DSA:3.40.50.620 160 289 5.4E-21 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0160 fb691126dcab5e72fde802c2b16af70d 298 Gene3D G3DSA:3.40.50.620 4 148 1.2E-38 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2455 b26e264b41a031126cc74577b02227cb 86 Pfam PF11183 Polymyxin resistance protein PmrD 11 86 3.4E-36 T 21-04-2016 SDY_2455 b26e264b41a031126cc74577b02227cb 86 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 11 86 2.0E-39 T 21-04-2016 IPR020146 Signal transduction protein PmrD SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF00005 ABC transporter 20 166 7.1E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.9E-120 T 21-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SUPERFAMILY SSF52540 4 236 1.13E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Gene3D G3DSA:3.40.50.300 3 234 3.7E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SMART SM00382 28 213 5.4E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.6E-7 T 21-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 PANTHER PTHR24220:SF497 5 238 3.2E-151 T 21-04-2016 SDY_3382 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 PANTHER PTHR24220 5 238 3.2E-151 T 21-04-2016 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 Gene3D G3DSA:3.40.190.10 185 261 6.8E-31 T 21-04-2016 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.4E-15 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 SUPERFAMILY SSF46785 1 85 3.3E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 PANTHER PTHR30126:SF6 1 309 8.6E-227 T 21-04-2016 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 PANTHER PTHR30126 1 309 8.6E-227 T 21-04-2016 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 Gene3D G3DSA:1.10.10.10 1 81 1.4E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 Gene3D G3DSA:3.40.190.10 92 184 4.1E-20 T 21-04-2016 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 Pfam PF03466 LysR substrate binding domain 92 292 9.5E-42 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1345 ad3819c0f4b4e4b26298db44aa2048fb 324 SUPERFAMILY SSF53850 91 322 8.15E-46 T 21-04-2016 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.3E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.7E-34 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 PANTHER PTHR30614 5 220 2.3E-124 T 21-04-2016 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 SUPERFAMILY SSF161098 13 203 2.49E-52 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 Gene3D G3DSA:1.10.3720.10 12 216 9.4E-56 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1099 9ad09d2a7d8366012d71e8e45926cba4 222 PANTHER PTHR30614:SF18 5 220 2.3E-124 T 21-04-2016 SDY_2285 321737699685269595bf4dea5abe4481 131 PANTHER PTHR33293 6 126 1.3E-24 T 21-04-2016 SDY_2285 321737699685269595bf4dea5abe4481 131 PANTHER PTHR33293:SF1 6 126 1.3E-24 T 21-04-2016 SDY_2285 321737699685269595bf4dea5abe4481 131 Pfam PF03400 IS1 transposase 2 131 1.2E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF55200 90 179 3.92E-35 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.30.110.10 87 179 1.6E-40 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF54364 13 86 7.85E-29 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 21-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.10.20.80 13 86 1.2E-35 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.4E-38 T 21-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 PANTHER PTHR10938 10 180 2.7E-70 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.82 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.1E-78 T 21-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SDY_1813 45916890555801d87d58e0e9bacc14fc 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 8.3E-31 T 21-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 Gene3D G3DSA:1.20.1250.20 17 198 1.0E-31 T 21-04-2016 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 Gene3D G3DSA:1.20.1250.20 270 505 1.2E-17 T 21-04-2016 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 SUPERFAMILY SSF103473 479 504 1.18E-68 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 SUPERFAMILY SSF103473 255 427 1.18E-68 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 SUPERFAMILY SSF103473 7 197 1.18E-68 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 PANTHER PTHR23501:SF52 8 505 5.6E-284 T 21-04-2016 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 PANTHER PTHR23501 8 505 5.6E-284 T 21-04-2016 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 502 7.4E-172 T 21-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SDY_2562 aac8592c01abb5a0c8606cc468c473ad 512 Pfam PF07690 Major Facilitator Superfamily 23 417 1.3E-51 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3643 4a747783b413e8b7d9e4e498a8b2abce 127 Pfam PF03611 PTS system sugar-specific permease component 14 123 2.6E-24 T 21-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SDY_3643 4a747783b413e8b7d9e4e498a8b2abce 127 PANTHER PTHR37324 6 123 8.2E-61 T 21-04-2016 SDY_3643 4a747783b413e8b7d9e4e498a8b2abce 127 PANTHER PTHR37324:SF2 6 123 8.2E-61 T 21-04-2016 SDY_3555 bc5a90f9f38f27f1fe24740e9a02d067 342 Gene3D G3DSA:3.40.1570.10 188 336 2.2E-11 T 21-04-2016 SDY_3555 bc5a90f9f38f27f1fe24740e9a02d067 342 Gene3D G3DSA:3.40.1570.10 9 155 1.2E-8 T 21-04-2016 SDY_3555 bc5a90f9f38f27f1fe24740e9a02d067 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 335 2.9E-41 T 21-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 SDY_3555 bc5a90f9f38f27f1fe24740e9a02d067 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 27 155 7.5E-40 T 21-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 SDY_3555 bc5a90f9f38f27f1fe24740e9a02d067 342 SUPERFAMILY SSF144064 2 336 7.65E-129 T 21-04-2016 SDY_1940 e9c7328eaa57bd6816b19794a4b7d74f 222 Pfam PF04012 PspA/IM30 family 2 216 1.1E-47 T 21-04-2016 IPR007157 PspA/IM30 SDY_1940 e9c7328eaa57bd6816b19794a4b7d74f 222 PANTHER PTHR31088:SF7 2 221 3.5E-127 T 21-04-2016 SDY_1940 e9c7328eaa57bd6816b19794a4b7d74f 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 7.4E-92 T 21-04-2016 IPR014319 Phage shock protein, PspA SDY_1940 e9c7328eaa57bd6816b19794a4b7d74f 222 PANTHER PTHR31088 2 221 3.5E-127 T 21-04-2016 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 SUPERFAMILY SSF56176 430 515 3.82E-18 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 Pfam PF03741 Integral membrane protein TerC family 14 203 8.7E-49 T 21-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 Gene3D G3DSA:3.10.580.10 284 424 2.3E-11 T 21-04-2016 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 SUPERFAMILY SSF54631 286 420 2.15E-22 T 21-04-2016 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 Pfam PF03471 Transporter associated domain 432 507 2.6E-17 T 21-04-2016 IPR005170 Transporter-associated domain SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 PANTHER PTHR22777:SF15 1 516 0.0 T 21-04-2016 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 SMART SM01091 429 509 3.5E-21 T 21-04-2016 IPR005170 Transporter-associated domain SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 Gene3D G3DSA:3.30.465.10 425 515 8.5E-21 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_1962 288ad2c371f4bf4d367d85ee576c7f7c 516 PANTHER PTHR22777 1 516 0.0 T 21-04-2016 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 5.7E-6 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 5.7E-6 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 5.7E-6 T 21-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Pfam PF00970 Oxidoreductase FAD-binding domain 17 104 1.1E-7 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 3.0E-14 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Gene3D G3DSA:2.40.30.10 10 105 2.0E-18 T 21-04-2016 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Gene3D G3DSA:3.10.20.30 226 321 3.5E-26 T 21-04-2016 IPR012675 Beta-grasp domain SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 SUPERFAMILY SSF63380 9 105 5.63E-21 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Gene3D G3DSA:3.40.50.80 106 225 3.2E-23 T 21-04-2016 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 PANTHER PTHR19370:SF89 8 247 2.7E-134 T 21-04-2016 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 3.2E-7 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 SUPERFAMILY SSF54292 221 321 1.7E-25 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 PANTHER PTHR19370 8 247 2.7E-134 T 21-04-2016 SDY_2391 54e6e0d64f2d319b8a79f01ff701b180 322 SUPERFAMILY SSF52343 95 220 3.8E-25 T 21-04-2016 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 PANTHER PTHR10992 12 224 1.2E-25 T 21-04-2016 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 224 40.431 T 21-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 6.9E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 6.9E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 6.9E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 6.9E-5 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 Gene3D G3DSA:3.40.50.1820 11 223 2.9E-39 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 224 1.5E-106 T 21-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 SUPERFAMILY SSF53474 9 224 4.05E-42 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0984 44dcd2e6fa49cfba4776631bc2027795 224 Pfam PF00561 alpha/beta hydrolase fold 14 115 3.3E-17 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_0742 7885e0eba34580e83baca434ef5e4715 158 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 1.1E-16 T 21-04-2016 IPR019660 Putative sensory transduction regulator YbjN SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PANTHER PTHR21266 13 374 1.1E-108 T 21-04-2016 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 Gene3D G3DSA:2.102.10.10 46 151 1.3E-27 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 Gene3D G3DSA:3.90.380.10 152 342 2.0E-14 T 21-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 SUPERFAMILY SSF55961 160 371 3.53E-34 T 21-04-2016 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 21-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 9.6E-26 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 9.6E-26 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 9.6E-26 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 9.6E-26 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 9.6E-26 T 21-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 SUPERFAMILY SSF50022 18 159 1.06E-47 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 370 1.3E-21 T 21-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 PANTHER PTHR21266:SF2 13 374 1.1E-108 T 21-04-2016 SDY_1706 bc910dcac6ab8e55676a95342d827f06 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 1.3E-20 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.383 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 21-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.5E-22 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 PANTHER PTHR10916 1 63 8.4E-30 T 21-04-2016 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 Gene3D G3DSA:1.10.287.310 1 60 1.9E-27 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 SUPERFAMILY SSF46561 1 61 5.89E-22 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3488 28dd701feee1469eb60b83e2b1d1fffe 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-22 T 21-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 Pfam PF01435 Peptidase family M48 72 259 5.6E-26 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 Pfam PF14559 Tetratricopeptide repeat 354 418 1.4E-10 T 21-04-2016 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 PANTHER PTHR22726 1 351 6.0E-146 T 21-04-2016 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 SUPERFAMILY SSF48452 313 428 4.32E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 PANTHER PTHR22726:SF10 1 351 6.0E-146 T 21-04-2016 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 Gene3D G3DSA:1.25.40.10 310 453 6.8E-15 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 Gene3D G3DSA:3.30.2010.10 68 150 2.3E-15 T 21-04-2016 SDY_2683 9cddf97715bae3291cdd0d9ead1c8054 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 482 32.489 T 21-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 SDY_2686 cdc12cbb1773b53775dc56a58c4c3e54 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 3.5E-131 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_2686 cdc12cbb1773b53775dc56a58c4c3e54 429 Pfam PF00860 Permease family 16 382 4.7E-108 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_2686 cdc12cbb1773b53775dc56a58c4c3e54 429 PANTHER PTHR11119 1 407 1.2E-176 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_2686 cdc12cbb1773b53775dc56a58c4c3e54 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_2686 cdc12cbb1773b53775dc56a58c4c3e54 429 PANTHER PTHR11119:SF49 1 407 1.2E-176 T 21-04-2016 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 Pfam PF00005 ABC transporter 369 513 1.1E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 SUPERFAMILY SSF90123 11 331 3.01E-54 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 SUPERFAMILY SSF52540 349 582 1.16E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 PANTHER PTHR24221:SF261 1 588 0.0 T 21-04-2016 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 SMART SM00382 375 560 4.0E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 Gene3D G3DSA:1.20.1560.10 21 335 2.4E-45 T 21-04-2016 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 PANTHER PTHR24221 1 588 0.0 T 21-04-2016 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 9.8E-189 T 21-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 Gene3D G3DSA:3.40.50.300 350 572 3.5E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2374 73b4fa123fe183bd93d9bd3b53aaf176 588 Pfam PF00664 ABC transporter transmembrane region 26 291 2.9E-49 T 21-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SDY_3567 5c3e9984919757f7cc69deb288ba224a 144 SUPERFAMILY SSF52402 3 139 1.59E-32 T 21-04-2016 SDY_3567 5c3e9984919757f7cc69deb288ba224a 144 Gene3D G3DSA:3.40.50.620 3 139 7.3E-32 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3567 5c3e9984919757f7cc69deb288ba224a 144 PIRSF PIRSF006276 1 141 3.4E-54 T 21-04-2016 IPR006015 Universal stress protein A SDY_3567 5c3e9984919757f7cc69deb288ba224a 144 Pfam PF00582 Universal stress protein family 3 138 2.4E-21 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 21-04-2016 IPR001455 TusA-like domain SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 Pfam PF01206 Sulfurtransferase TusA 10 79 2.1E-25 T 21-04-2016 IPR001455 TusA-like domain SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 PANTHER PTHR33279 7 80 1.4E-48 T 21-04-2016 SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 SUPERFAMILY SSF64307 5 80 9.03E-28 T 21-04-2016 IPR001455 TusA-like domain SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.938 T 21-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 Gene3D G3DSA:3.30.110.40 6 80 7.2E-32 T 21-04-2016 IPR001455 TusA-like domain SDY_3621 5a422db384aafff6e9de57f0759b81fb 81 PANTHER PTHR33279:SF5 7 80 1.4E-48 T 21-04-2016 SDY_1319 d2929ceb13b8dd82c288a01ba7296e63 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 247 23.99 T 21-04-2016 IPR009627 Uncharacterised protein family UPF0259 SDY_1319 d2929ceb13b8dd82c288a01ba7296e63 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.7E-103 T 21-04-2016 IPR009627 Uncharacterised protein family UPF0259 SDY_4809 c2120f242e6d8d6d5eb78c23918f88dc 90 Pfam PF03811 InsA N-terminal domain 1 35 1.4E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4809 c2120f242e6d8d6d5eb78c23918f88dc 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4809 c2120f242e6d8d6d5eb78c23918f88dc 90 PANTHER PTHR33293 1 89 6.5E-20 T 21-04-2016 SDY_4809 c2120f242e6d8d6d5eb78c23918f88dc 90 PANTHER PTHR33293:SF2 1 89 6.5E-20 T 21-04-2016 SDY_1718 4a33a741db3e9138917807adec7c9575 453 SUPERFAMILY SSF56322 4 452 7.33E-147 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PANTHER PTHR11236:SF18 29 453 1.8E-170 T 21-04-2016 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PANTHER PTHR11236 29 453 1.8E-170 T 21-04-2016 SDY_1718 4a33a741db3e9138917807adec7c9575 453 Gene3D G3DSA:3.60.120.10 11 452 1.9E-154 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_1718 4a33a741db3e9138917807adec7c9575 453 Pfam PF00425 chorismate binding enzyme 190 443 1.5E-92 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SDY_1718 4a33a741db3e9138917807adec7c9575 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 153 8.4E-29 T 21-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1718 4a33a741db3e9138917807adec7c9575 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 446 2.3E-143 T 21-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PRINTS PR00095 Anthranilate synthase component I signature 400 414 1.0E-18 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PRINTS PR00095 Anthranilate synthase component I signature 291 304 1.0E-18 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PRINTS PR00095 Anthranilate synthase component I signature 385 399 1.0E-18 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1718 4a33a741db3e9138917807adec7c9575 453 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.0E-18 T 21-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 Pfam PF03466 LysR substrate binding domain 90 294 1.7E-36 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 Gene3D G3DSA:3.40.190.10 94 178 5.1E-16 T 21-04-2016 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-7 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 PANTHER PTHR30537 1 297 3.3E-167 T 21-04-2016 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 Gene3D G3DSA:1.10.10.10 6 90 3.0E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 SUPERFAMILY SSF46785 6 90 2.6E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 PANTHER PTHR30537:SF1 1 297 3.3E-167 T 21-04-2016 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.0E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 SUPERFAMILY SSF53850 92 294 5.79E-36 T 21-04-2016 SDY_1408 eae9dd50528e22fa8e2b9ae5dd2f8567 299 Gene3D G3DSA:3.40.190.10 179 263 7.4E-14 T 21-04-2016 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 518 7.5E-240 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 PANTHER PTHR13847 27 545 1.4E-234 T 21-04-2016 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 SUPERFAMILY SSF51905 28 91 9.07E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 SUPERFAMILY SSF51905 144 358 9.07E-26 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 518 55.471 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 516 2.8E-216 T 21-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 Gene3D G3DSA:3.50.50.60 173 358 5.7E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 Gene3D G3DSA:3.50.50.60 30 98 5.7E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0866 3c614faab3b06cb46ae0d6eaa188f804 548 PANTHER PTHR13847:SF214 27 545 1.4E-234 T 21-04-2016 SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 97 5.6E-33 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 PANTHER PTHR12589 1 121 2.1E-53 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 121 6.7E-34 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 SUPERFAMILY SSF55620 1 120 1.72E-40 T 21-04-2016 SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 Gene3D G3DSA:3.30.479.10 2 121 1.0E-39 T 21-04-2016 SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 4 120 1.3E-38 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SDY_2967 f7800e25b2a23361178e6c6d4c3c5408 121 PIRSF PIRSF006113 1 121 1.8E-56 T 21-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SDY_0464 e89f57456cb5502e3bf107e30e7e14bb 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0464 e89f57456cb5502e3bf107e30e7e14bb 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0464 e89f57456cb5502e3bf107e30e7e14bb 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0464 e89f57456cb5502e3bf107e30e7e14bb 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2899 026d11747516950eafbaaf663541b94b 254 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 171 2.7E-67 T 21-04-2016 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 SDY_2899 026d11747516950eafbaaf663541b94b 254 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 226 253 7.8E-9 T 21-04-2016 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 SDY_2899 026d11747516950eafbaaf663541b94b 254 PANTHER PTHR39427 1 253 4.9E-92 T 21-04-2016 SDY_2899 026d11747516950eafbaaf663541b94b 254 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 253 1.5E-144 T 21-04-2016 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 SDY_1526 90fccce2fe60dd8cba1977919b051937 187 PANTHER PTHR12677:SF5 1 179 1.3E-45 T 21-04-2016 SDY_1526 90fccce2fe60dd8cba1977919b051937 187 PANTHER PTHR12677 1 179 1.3E-45 T 21-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SDY_1526 90fccce2fe60dd8cba1977919b051937 187 Pfam PF09335 SNARE associated Golgi protein 63 179 2.4E-27 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 Gene3D G3DSA:3.40.50.150 4 205 9.4E-75 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 PANTHER PTHR31760:SF0 1 207 4.8E-88 T 21-04-2016 SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 PIRSF PIRSF003078 1 207 2.2E-70 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 SUPERFAMILY SSF53335 4 204 1.99E-43 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.5E-68 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 PANTHER PTHR31760 1 207 4.8E-88 T 21-04-2016 SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.937 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SDY_4008 2ad6304da10dfd79987dce141072ebf2 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 5.6E-63 T 21-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SDY_3642 d1750da22f22ea976fc2cafae42fc6b2 93 PANTHER PTHR33843:SF3 1 93 2.6E-35 T 21-04-2016 SDY_3642 d1750da22f22ea976fc2cafae42fc6b2 93 PANTHER PTHR33843 1 93 2.6E-35 T 21-04-2016 SDY_3642 d1750da22f22ea976fc2cafae42fc6b2 93 Gene3D G3DSA:3.40.50.270 4 93 3.3E-28 T 21-04-2016 SDY_3642 d1750da22f22ea976fc2cafae42fc6b2 93 SUPERFAMILY SSF52794 4 91 3.77E-16 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3642 d1750da22f22ea976fc2cafae42fc6b2 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 83 9.2E-11 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 SUPERFAMILY SSF55326 7 170 1.11E-52 T 21-04-2016 SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 5.5E-155 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 Gene3D G3DSA:3.30.1330.10 22 170 3.0E-62 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 PANTHER PTHR10520 4 333 1.1E-225 T 21-04-2016 SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 SUPERFAMILY SSF56042 171 342 2.39E-64 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 Gene3D G3DSA:3.90.650.10 171 343 8.2E-69 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.934 T 21-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 1.1E-38 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2688 21f2fae0f311fc61bc6538bb16576913 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 2.4E-15 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2116 31cd1ac16d8e53bc0462508eea12f1cb 313 PIRSF PIRSF029202 1 313 9.9E-122 T 21-04-2016 IPR020049 Protein of unknown function DUF2184 SDY_2116 31cd1ac16d8e53bc0462508eea12f1cb 313 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 73 313 2.7E-83 T 21-04-2016 IPR020049 Protein of unknown function DUF2184 SDY_2903 1b1867055a94f89949d82a4cceb521ea 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 1.5E-35 T 21-04-2016 IPR009693 Glucitol operon activator SDY_2903 1b1867055a94f89949d82a4cceb521ea 119 PIRSF PIRSF011474 1 119 2.3E-47 T 21-04-2016 IPR009693 Glucitol operon activator SDY_0208 137c0f7492a7951bf6fc83f75f0059d6 72 Pfam PF06786 Uncharacterised protein family (UPF0253) 8 71 4.8E-34 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 SDY_0208 137c0f7492a7951bf6fc83f75f0059d6 72 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 72 3.0E-27 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 SDY_0208 137c0f7492a7951bf6fc83f75f0059d6 72 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 7 72 27.209 T 21-04-2016 IPR009624 Uncharacterised protein family UPF0253 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 SUPERFAMILY SSF161098 38 317 1.44E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 Gene3D G3DSA:1.10.3720.10 25 330 1.8E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 318 3.4E-16 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 325 6.3E-90 T 21-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 PANTHER PTHR30425:SF1 13 333 1.8E-152 T 21-04-2016 SDY_4023 ffc50b30e99c7ab91d7db9352ab158d2 333 PANTHER PTHR30425 13 333 1.8E-152 T 21-04-2016 SDY_2200 3553121941742cc0517537d41660afe0 73 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 19 63 8.3E-16 T 21-04-2016 IPR009241 Toxin HigB-like SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.7E-160 T 21-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 PANTHER PTHR11918:SF43 1 474 1.5E-242 T 21-04-2016 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 21-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 6.3E-223 T 21-04-2016 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 Gene3D G3DSA:3.80.30.20 146 380 8.7E-80 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 PANTHER PTHR11918 1 474 1.5E-242 T 21-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF01938 TRAM domain 378 440 6.2E-21 T 21-04-2016 IPR002792 TRAM domain SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.0E-29 T 21-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 SUPERFAMILY SSF102114 127 373 4.19E-64 T 21-04-2016 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF04055 Radical SAM superfamily 151 325 2.2E-27 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 SMART SM00729 147 367 7.6E-65 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_0597 f35ceae8be8a2b1d298ba3a79f389400 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.56 T 21-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SDY_2511 aad82902ab88412b375faadf708ac443 505 PIRSF PIRSF000485 1 483 2.7E-173 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SDY_2511 aad82902ab88412b375faadf708ac443 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.084 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SDY_2511 aad82902ab88412b375faadf708ac443 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.2E-162 T 21-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SDY_2511 aad82902ab88412b375faadf708ac443 505 PANTHER PTHR11907 1 480 7.0E-262 T 21-04-2016 SDY_2511 aad82902ab88412b375faadf708ac443 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.2E-7 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SDY_2511 aad82902ab88412b375faadf708ac443 505 SUPERFAMILY SSF53271 252 485 1.44E-71 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_2511 aad82902ab88412b375faadf708ac443 505 SUPERFAMILY SSF56235 2 259 7.89E-75 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_2511 aad82902ab88412b375faadf708ac443 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.8E-15 T 21-04-2016 SDY_2511 aad82902ab88412b375faadf708ac443 505 Gene3D G3DSA:3.60.20.10 2 260 1.0E-64 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_2511 aad82902ab88412b375faadf708ac443 505 Gene3D G3DSA:3.40.50.2020 280 446 2.1E-47 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_2511 aad82902ab88412b375faadf708ac443 505 PANTHER PTHR11907:SF0 1 480 7.0E-262 T 21-04-2016 SDY_1167 386d5ec1d027e8b23ad02df893f824e4 115 Pfam PF01904 Protein of unknown function DUF72 20 92 1.7E-7 T 21-04-2016 IPR002763 Protein of unknown function DUF72 SDY_1167 386d5ec1d027e8b23ad02df893f824e4 115 PANTHER PTHR30348:SF3 2 114 3.5E-21 T 21-04-2016 SDY_1167 386d5ec1d027e8b23ad02df893f824e4 115 SUPERFAMILY SSF117396 17 95 1.57E-9 T 21-04-2016 IPR002763 Protein of unknown function DUF72 SDY_1167 386d5ec1d027e8b23ad02df893f824e4 115 Gene3D G3DSA:3.20.20.410 22 104 1.9E-12 T 21-04-2016 IPR002763 Protein of unknown function DUF72 SDY_1167 386d5ec1d027e8b23ad02df893f824e4 115 PANTHER PTHR30348 2 114 3.5E-21 T 21-04-2016 SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 Gene3D G3DSA:1.25.40.10 259 343 6.4E-28 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 Pfam PF03918 Cytochrome C biogenesis protein 7 129 7.8E-51 T 21-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 PANTHER PTHR30009:SF10 149 340 1.7E-53 T 21-04-2016 SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 PANTHER PTHR30009 149 340 1.7E-53 T 21-04-2016 SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 SUPERFAMILY SSF48452 218 327 8.63E-19 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0884 d8d5a81079912d3c2e5c747edbd16dfe 350 Gene3D G3DSA:1.25.40.10 160 258 2.7E-7 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 PANTHER PTHR30504 1 551 0.0 T 21-04-2016 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 SUPERFAMILY SSF74650 45 421 1.35E-145 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 Gene3D G3DSA:2.70.98.10 44 422 2.2E-160 T 21-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 2.0E-180 T 21-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 32 9.0E-4 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 PANTHER PTHR30504:SF3 1 551 0.0 T 21-04-2016 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 SUPERFAMILY SSF81296 423 537 1.89E-27 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 Gene3D G3DSA:2.60.40.10 423 545 2.4E-32 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 60.987 T 21-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 SDY_1756 99b71031cd4beeaa600f62c8aa08ee71 551 PIRSF PIRSF006281 1 538 7.4E-207 T 21-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 PANTHER PTHR30465 10 300 1.2E-145 T 21-04-2016 SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.4E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 1.5E-16 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 Gene3D G3DSA:1.10.3720.10 88 296 2.7E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 PANTHER PTHR30465:SF10 10 300 1.2E-145 T 21-04-2016 SDY_4565 169b7224a5dfb69682b9dbaa55e59de8 300 SUPERFAMILY SSF161098 93 280 7.85E-29 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 SUPERFAMILY SSF140570 119 281 1.23E-77 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 Pfam PF17192 MukF middle domain 121 281 4.4E-85 T 21-04-2016 IPR033440 Chromosome partition protein MukF, middle domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 Pfam PF17193 MukF C-terminal domain 283 440 4.5E-81 T 21-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 Pfam PF03882 MukF winged-helix domain 3 117 8.1E-58 T 21-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 Gene3D G3DSA:1.10.10.10 24 118 4.7E-49 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.932 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 SUPERFAMILY SSF46785 8 118 1.83E-48 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2336 acbb48e71c3c393506fdb692a2b1f8f3 440 PIRSF PIRSF018282 1 440 1.0E-244 T 21-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 21-04-2016 IPR025944 Sigma-54 interaction domain, conserved site SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 323 1.1E-161 T 21-04-2016 IPR014317 Transcription activator PspF SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 SMART SM00382 28 180 2.9E-10 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 21-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 306 325 2.8E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 289 306 2.8E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 PANTHER PTHR32071:SF38 1 325 9.3E-244 T 21-04-2016 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 SUPERFAMILY SSF46689 222 325 1.52E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 Gene3D G3DSA:1.10.8.60 180 253 1.2E-21 T 21-04-2016 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 Pfam PF02954 Bacterial regulatory protein, Fis family 286 322 9.3E-5 T 21-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 PANTHER PTHR32071 1 325 9.3E-244 T 21-04-2016 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 Gene3D G3DSA:3.40.50.300 6 179 2.6E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 Pfam PF00158 Sigma-54 interaction domain 9 170 2.0E-62 T 21-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 SUPERFAMILY SSF52540 9 250 1.08E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1941 84ac3c6d4df978bb923d967cdb6b71dc 325 Gene3D G3DSA:1.10.10.60 273 325 4.5E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PANTHER PTHR30413:SF2 2 256 3.2E-167 T 21-04-2016 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PIRSF PIRSF006648 11 252 4.4E-22 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.9E-7 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 Pfam PF01061 ABC-2 type transporter 9 218 2.6E-39 T 21-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SDY_0037 b33785388ed7fee27027fd1c6f05e055 256 PANTHER PTHR30413 2 256 3.2E-167 T 21-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 Gene3D G3DSA:1.10.150.240 20 82 1.3E-37 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 4.2E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 4.2E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 4.2E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.2E-6 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PANTHER PTHR18901 1 215 1.5E-75 T 21-04-2016 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 1.1E-22 T 21-04-2016 IPR023214 HAD-like domain SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 PANTHER PTHR18901:SF34 1 215 1.5E-75 T 21-04-2016 SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 Gene3D G3DSA:3.40.50.1000 83 216 1.5E-36 T 21-04-2016 IPR023214 HAD-like domain SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 SUPERFAMILY SSF56784 7 216 9.98E-48 T 21-04-2016 IPR023214 HAD-like domain SDY_1820 e04b921209cbe6affb11c31151c7d1fa 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 191 4.8E-11 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3523 c98f5dc875b01e54b70a88c0488f0ae9 200 SUPERFAMILY SSF140931 43 195 7.19E-29 T 21-04-2016 IPR003812 Fido domain SDY_3523 c98f5dc875b01e54b70a88c0488f0ae9 200 Pfam PF02661 Fic/DOC family 58 152 2.4E-14 T 21-04-2016 IPR003812 Fido domain SDY_3523 c98f5dc875b01e54b70a88c0488f0ae9 200 Gene3D G3DSA:1.10.3290.10 11 196 2.8E-52 T 21-04-2016 IPR003812 Fido domain SDY_3523 c98f5dc875b01e54b70a88c0488f0ae9 200 PANTHER PTHR39560 1 200 1.4E-62 T 21-04-2016 SDY_3523 c98f5dc875b01e54b70a88c0488f0ae9 200 PANTHER PTHR39560:SF1 1 200 1.4E-62 T 21-04-2016 SDY_2851 4ef1c405b6d3b20f326112b9380a1acc 80 SUPERFAMILY SSF53720 1 79 1.07E-23 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_2851 4ef1c405b6d3b20f326112b9380a1acc 80 PANTHER PTHR11699 1 78 6.1E-43 T 21-04-2016 SDY_2851 4ef1c405b6d3b20f326112b9380a1acc 80 PANTHER PTHR11699:SF49 1 78 6.1E-43 T 21-04-2016 SDY_2851 4ef1c405b6d3b20f326112b9380a1acc 80 Pfam PF00171 Aldehyde dehydrogenase family 1 75 7.8E-23 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_2851 4ef1c405b6d3b20f326112b9380a1acc 80 Gene3D G3DSA:3.40.309.10 1 56 1.2E-14 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 SMART SM00450 4 134 3.0E-14 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 SUPERFAMILY SSF52821 9 66 9.88E-20 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 SUPERFAMILY SSF52821 94 134 9.88E-20 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 349 2.5E-106 T 21-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 PANTHER PTHR30401 1 364 4.1E-225 T 21-04-2016 SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 Gene3D G3DSA:3.40.250.10 11 131 2.7E-32 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 PANTHER PTHR30401:SF0 1 364 4.1E-225 T 21-04-2016 SDY_0399 3a8fd44967157519f8a44fbb51b978e9 364 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 49.627 T 21-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 PANTHER PTHR30372 1 380 1.2E-147 T 21-04-2016 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 PANTHER PTHR30372:SF0 1 380 1.2E-147 T 21-04-2016 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 1.5E-191 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 Gene3D G3DSA:3.40.50.2000 172 358 1.3E-6 T 21-04-2016 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.639 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 2.6E-157 T 21-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SDY_0198 0f4f4b8b8a5e12db0bd620b5adf9fb22 382 SUPERFAMILY SSF53756 9 361 5.34E-30 T 21-04-2016 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 Gene3D G3DSA:3.40.50.1450 5 164 1.8E-49 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 Pfam PF01750 Hydrogenase maturation protease 23 151 1.7E-40 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PANTHER PTHR30302:SF6 1 168 1.7E-145 T 21-04-2016 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PRINTS PR00446 Hydrogen uptake protein signature 18 29 2.0E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PRINTS PR00446 Hydrogen uptake protein signature 59 69 2.0E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PRINTS PR00446 Hydrogen uptake protein signature 6 18 2.0E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PRINTS PR00446 Hydrogen uptake protein signature 70 86 2.0E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PRINTS PR00446 Hydrogen uptake protein signature 38 55 2.0E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 1.8E-43 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 PANTHER PTHR30302 1 168 1.7E-145 T 21-04-2016 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 4.3E-61 T 21-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SDY_0950 9e6f685116c8606892ad70c69c5f22bf 195 SUPERFAMILY SSF53163 5 163 2.17E-43 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_1219 251f884b16409703c6eb84a433623281 80 Pfam PF06109 Haemolysin E (HlyE) 15 79 1.4E-28 T 21-04-2016 IPR027018 Hemolysin E GO:0009405|GO:0044179 SDY_1219 251f884b16409703c6eb84a433623281 80 Gene3D G3DSA:1.20.1170.10 1 79 2.6E-49 T 21-04-2016 SDY_1219 251f884b16409703c6eb84a433623281 80 SUPERFAMILY SSF58100 1 79 2.48E-43 T 21-04-2016 SDY_0591 c7a70fa203fd23733438229d9b1ba326 270 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_0591 c7a70fa203fd23733438229d9b1ba326 270 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0591 c7a70fa203fd23733438229d9b1ba326 270 SUPERFAMILY SSF53098 65 229 1.82E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0591 c7a70fa203fd23733438229d9b1ba326 270 Pfam PF00665 Integrase core domain 72 186 2.8E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0591 c7a70fa203fd23733438229d9b1ba326 270 Pfam PF13276 HTH-like domain 5 47 4.6E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_4542 04d0e38baebb0d0651a149e58c95900d 337 PANTHER PTHR30213:SF1 23 336 2.0E-93 T 21-04-2016 SDY_4542 04d0e38baebb0d0651a149e58c95900d 337 PANTHER PTHR30213 23 336 2.0E-93 T 21-04-2016 SDY_4542 04d0e38baebb0d0651a149e58c95900d 337 Pfam PF03631 Virulence factor BrkB 66 325 1.1E-51 T 21-04-2016 IPR017039 Virulence factor BrkB SDY_4542 04d0e38baebb0d0651a149e58c95900d 337 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 326 3.3E-136 T 21-04-2016 IPR005274 Inner membrane protein YhjD SDY_4542 04d0e38baebb0d0651a149e58c95900d 337 PIRSF PIRSF035875 36 328 3.0E-23 T 21-04-2016 IPR017039 Virulence factor BrkB SDY_1335 48e53870110300849e35d6ec714fd236 218 SUPERFAMILY SSF55821 13 216 1.1E-66 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_1335 48e53870110300849e35d6ec714fd236 218 Gene3D G3DSA:3.90.870.10 14 215 1.2E-65 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_1335 48e53870110300849e35d6ec714fd236 218 PANTHER PTHR17490 13 217 1.7E-104 T 21-04-2016 SDY_1335 48e53870110300849e35d6ec714fd236 218 Pfam PF01300 Telomere recombination 35 210 9.9E-47 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 SDY_1335 48e53870110300849e35d6ec714fd236 218 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 19 216 5.6E-80 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 SDY_1335 48e53870110300849e35d6ec714fd236 218 PANTHER PTHR17490:SF7 13 217 1.7E-104 T 21-04-2016 SDY_3824 2c4001305ea40bf964f4df327f91e941 143 PANTHER PTHR34980:SF1 1 142 1.5E-50 T 21-04-2016 SDY_3824 2c4001305ea40bf964f4df327f91e941 143 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.1E-21 T 21-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SDY_3824 2c4001305ea40bf964f4df327f91e941 143 PANTHER PTHR34980 1 142 1.5E-50 T 21-04-2016 SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 SUPERFAMILY SSF53590 3 300 4.19E-94 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 80.15 T 21-04-2016 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 Gene3D G3DSA:3.90.245.10 3 300 1.2E-100 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 PANTHER PTHR12304:SF15 1 300 2.6E-197 T 21-04-2016 SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 PANTHER PTHR12304 1 300 2.6E-197 T 21-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 5.2E-69 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_0052 ad147e6805bb2ababc97d6c7845605e7 304 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 21-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 SDY_4337 64859958953b3cb4f52617bc0204b13c 115 PANTHER PTHR33293 6 107 8.8E-20 T 21-04-2016 SDY_4337 64859958953b3cb4f52617bc0204b13c 115 PANTHER PTHR33293:SF1 6 107 8.8E-20 T 21-04-2016 SDY_4337 64859958953b3cb4f52617bc0204b13c 115 Pfam PF03400 IS1 transposase 2 108 1.1E-61 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PANTHER PTHR11575:SF27 1 543 1.1E-256 T 21-04-2016 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 SUPERFAMILY SSF55816 363 543 1.15E-53 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 Gene3D G3DSA:3.60.21.10 28 361 7.3E-96 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 417 440 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 283 303 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 32 50 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 207 224 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 238 261 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PRINTS PR01607 Apyrase family signature 484 503 3.4E-62 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 2.7E-32 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 SUPERFAMILY SSF56300 27 360 4.75E-94 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 2.2E-18 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 21-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 PANTHER PTHR11575 1 543 1.1E-256 T 21-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SDY_0438 5f0ef67f77cb645bb31824a15a89ccc5 550 Gene3D G3DSA:3.90.780.10 363 540 2.5E-56 T 21-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SDY_1321 c4190c70284b75eea9cc2b6292ecf620 169 Pfam PF05974 Domain of unknown function (DUF892) 6 156 2.2E-48 T 21-04-2016 IPR010287 Domain of unknown function DUF892 SDY_1321 c4190c70284b75eea9cc2b6292ecf620 169 PANTHER PTHR30565 7 169 1.1E-107 T 21-04-2016 SDY_1321 c4190c70284b75eea9cc2b6292ecf620 169 Gene3D G3DSA:1.20.1260.10 6 161 7.2E-53 T 21-04-2016 IPR012347 Ferritin-related SDY_1321 c4190c70284b75eea9cc2b6292ecf620 169 PANTHER PTHR30565:SF1 7 169 1.1E-107 T 21-04-2016 SDY_1321 c4190c70284b75eea9cc2b6292ecf620 169 SUPERFAMILY SSF47240 6 156 8.12E-45 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 SMART SM00465 2 81 5.9E-4 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 Pfam PF01541 GIY-YIG catalytic domain 4 75 9.6E-14 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 PANTHER PTHR34477 1 100 3.6E-46 T 21-04-2016 SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 PANTHER PTHR34477:SF1 1 100 3.6E-46 T 21-04-2016 SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 32.519 T 21-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease SDY_3334 4c328ae87faac04e3d68b18fcf51274b 100 SUPERFAMILY SSF82771 3 72 3.4E-11 T 21-04-2016 IPR000305 GIY-YIG nuclease superfamily SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 198 384 1.36E-47 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.4E-30 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 PIRSF PIRSF003101 2 420 5.3E-153 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 298 359 1.4E-29 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 210 234 1.4E-29 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.4E-25 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.576 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.90.640.10 235 297 4.3E-18 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 SMART SM00842 10 196 1.1E-96 T 21-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 8 221 1.94E-61 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 6 138 2.1E-33 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 169 209 1.4E-5 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 PANTHER PTHR32432:SF4 1 420 4.7E-183 T 21-04-2016 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.2E-161 T 21-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SDY_0124 7b58e674ba3dcc106ceb417c9db138f7 420 PANTHER PTHR32432 1 420 4.7E-183 T 21-04-2016 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 PANTHER PTHR11662:SF286 1 435 5.8E-243 T 21-04-2016 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 Gene3D G3DSA:1.20.1250.20 22 211 7.6E-48 T 21-04-2016 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 Gene3D G3DSA:1.20.1250.20 244 435 1.5E-37 T 21-04-2016 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 Pfam PF07690 Major Facilitator Superfamily 36 397 4.7E-49 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 414 5.4E-152 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 PIRSF PIRSF002808 7 440 4.4E-156 T 21-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 SUPERFAMILY SSF103473 17 433 9.29E-77 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 ProSitePatterns PS00942 glpT family of transporters signature. 152 168 - T 21-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 SDY_4148 dbf2981bd61e9661516c0db24ee04a0a 440 PANTHER PTHR11662 1 435 5.8E-243 T 21-04-2016 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 Pfam PF08753 NikR C terminal nickel binding domain 54 127 1.2E-27 T 21-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal SDY_3636 6d977bb96b25187abc5348661bf9f009 133 PANTHER PTHR34719 1 133 2.2E-58 T 21-04-2016 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 1 131 27.936 T 21-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:1.10.1220.10 1 46 1.1E-23 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF47598 1 45 3.6E-12 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 PANTHER PTHR34719:SF2 1 133 2.2E-58 T 21-04-2016 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF55021 53 132 2.52E-26 T 21-04-2016 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:3.30.70.1150 50 132 7.0E-34 T 21-04-2016 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 8.0E-68 T 21-04-2016 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 SDY_3636 6d977bb96b25187abc5348661bf9f009 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.5E-11 T 21-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 SUPERFAMILY SSF161098 35 286 9.94E-33 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 Gene3D G3DSA:1.10.3720.10 27 294 3.1E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 292 1.1E-85 T 21-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 PANTHER PTHR30425 5 295 9.3E-136 T 21-04-2016 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 PANTHER PTHR30425:SF0 5 295 9.3E-136 T 21-04-2016 SDY_4024 32d0ef9e602adf1a084a0b1607138bda 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 9.6E-31 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 PANTHER PTHR30290 1 547 0.0 T 21-04-2016 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 PANTHER PTHR30290:SF28 1 547 0.0 T 21-04-2016 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 Gene3D G3DSA:3.10.105.10 293 508 4.5E-54 T 21-04-2016 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 3.8E-84 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 Gene3D G3DSA:3.90.76.10 44 223 7.1E-45 T 21-04-2016 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 PIRSF PIRSF002741 1 543 7.3E-93 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_1638 83a91f3180f236d5a6003561f90b78b4 547 SUPERFAMILY SSF53850 36 537 1.81E-133 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF81665 683 770 8.76E-6 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF81665 506 594 8.76E-6 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF81665 844 900 8.76E-6 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 Gene3D G3DSA:2.30.30.60 945 994 8.8E-18 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 2.1E-94 T 21-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 1.8E-64 T 21-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 PANTHER PTHR30347:SF2 10 1118 0.0 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF50182 930 995 6.87E-17 T 21-04-2016 IPR010920 LSM domain SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF82689 998 1097 4.71E-26 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 Pfam PF00924 Mechanosensitive ion channel 887 1086 2.5E-61 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 SUPERFAMILY SSF82861 845 928 1.22E-8 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 PANTHER PTHR30347 10 1118 0.0 T 21-04-2016 SDY_0454 d9c06ed97171bc953ace9c606ed0c104 1120 Gene3D G3DSA:3.30.70.100 999 1084 4.1E-23 T 21-04-2016 SDY_1952 6c3d867af765450b81142aec03772dc2 516 PANTHER PTHR11785:SF25 15 513 0.0 T 21-04-2016 SDY_1952 6c3d867af765450b81142aec03772dc2 516 PIRSF PIRSF006060 40 507 1.4E-66 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1952 6c3d867af765450b81142aec03772dc2 516 ProSitePatterns PS00218 Amino acid permeases signature. 76 106 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_1952 6c3d867af765450b81142aec03772dc2 516 PANTHER PTHR11785 15 513 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_1952 6c3d867af765450b81142aec03772dc2 516 Pfam PF00324 Amino acid permease 52 493 1.5E-126 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_1908 45b221a7f65fe18aefeef1bec5704c51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 7.9E-25 T 21-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 SDY_1908 45b221a7f65fe18aefeef1bec5704c51 78 SUPERFAMILY SSF58042 24 74 2.49E-23 T 21-04-2016 SDY_1908 45b221a7f65fe18aefeef1bec5704c51 78 Gene3D G3DSA:1.20.5.190 22 73 4.9E-25 T 21-04-2016 SDY_1908 45b221a7f65fe18aefeef1bec5704c51 78 PIRSF PIRSF002855 1 78 1.3E-28 T 21-04-2016 IPR016367 Murein-lipoprotein SDY_1908 45b221a7f65fe18aefeef1bec5704c51 78 PANTHER PTHR38763 1 78 2.8E-29 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 2.5E-84 T 21-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 1.4E-151 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081:SF1 224 282 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081:SF1 1 173 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081:SF1 313 613 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081 1 173 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081 313 613 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 PANTHER PTHR30081 224 282 5.0E-241 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.246 T 21-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 Pfam PF02355 Protein export membrane protein 433 601 2.0E-15 T 21-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 Gene3D G3DSA:1.20.1640.10 443 610 3.9E-25 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 SUPERFAMILY SSF82866 410 606 2.75E-40 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 SUPERFAMILY SSF82866 337 349 2.75E-40 T 21-04-2016 SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.6E-38 T 21-04-2016 IPR027398 SecD export protein N-terminal TM domain SDY_0326 2f3b50bac6c257dd6c7260ea17b99a01 615 Pfam PF07549 SecD/SecF GG Motif 120 140 5.0E-6 T 21-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SDY_2192 1fe3bc9b76f44a32ff69eacba8342d2b 646 Gene3D G3DSA:1.10.150.20 516 551 4.4E-5 T 21-04-2016 SDY_2192 1fe3bc9b76f44a32ff69eacba8342d2b 646 PIRSF PIRSF030823 1 646 0.0 T 21-04-2016 IPR016960 Uncharacterised conserved protein UCP030823, kinase, HhH DNA-binding SDY_2192 1fe3bc9b76f44a32ff69eacba8342d2b 646 Gene3D G3DSA:1.10.510.10 112 223 1.0E-5 T 21-04-2016 SDY_2192 1fe3bc9b76f44a32ff69eacba8342d2b 646 SUPERFAMILY SSF56112 83 227 1.96E-10 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_4458 8e05f3c5c70d3f16c1f84b5f1f09676c 1259 PANTHER PTHR36985 1 1259 0.0 T 21-04-2016 SDY_4458 8e05f3c5c70d3f16c1f84b5f1f09676c 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 1.4E-69 T 21-04-2016 IPR007452 Translocation and assembly module TamB SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984 1 61 6.2E-34 T 21-04-2016 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 21-04-2016 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984:SF1 1 61 6.2E-34 T 21-04-2016 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SDY_2892 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 21-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SDY_0651 c01f3dd40a1e7df472855b49d7b69f90 353 Gene3D G3DSA:2.60.40.1090 218 353 8.3E-6 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0651 c01f3dd40a1e7df472855b49d7b69f90 353 SUPERFAMILY SSF49401 217 353 8.45E-8 T 21-04-2016 IPR008966 Adhesion domain SDY_0651 c01f3dd40a1e7df472855b49d7b69f90 353 Pfam PF00419 Fimbrial protein 217 352 4.0E-6 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PANTHER PTHR30115 1 112 1.5E-83 T 21-04-2016 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PANTHER PTHR30115:SF12 1 112 1.5E-83 T 21-04-2016 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 21-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PIRSF PIRSF039144 1 112 6.2E-53 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.9E-41 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 SMART SM00938 4 105 6.4E-61 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-47 T 21-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SDY_0387 2c10f8c51446d7159794c9595ed25026 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 21-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SDY_0387 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 21-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-41 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-41 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-41 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_0387 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-41 T 21-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SDY_4201 0082f3f9576cd9ab072197c3f085f5ad 253 Gene3D G3DSA:3.90.470.20 36 111 7.2E-8 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 SUPERFAMILY SSF56235 12 429 2.74E-149 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Gene3D G3DSA:2.160.20.60 1211 1465 4.3E-97 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Gene3D G3DSA:3.60.20.10 12 433 2.2E-171 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Gene3D G3DSA:3.20.20.70 437 777 3.1E-101 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 PANTHER PTHR11938 1 1476 0.0 T 21-04-2016 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Pfam PF01493 GXGXG motif 1236 1419 1.6E-74 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.3E-104 T 21-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 SUPERFAMILY SSF51395 434 1191 1.18E-248 T 21-04-2016 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 8.9E-177 T 21-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.5E-158 T 21-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 Gene3D G3DSA:3.20.20.70 811 1198 2.2E-163 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 SUPERFAMILY SSF69336 1211 1465 1.44E-88 T 21-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SDY_3393 3f6dbe378c85e32a451361aa39381e2c 1486 PANTHER PTHR11938:SF1 1 1476 0.0 T 21-04-2016 SDY_0919 e77725ba50c7a2c30e8a57261e9cef9e 192 PIRSF PIRSF010252 13 191 5.5E-67 T 21-04-2016 IPR009809 Cell division protein ZapC SDY_0919 e77725ba50c7a2c30e8a57261e9cef9e 192 Pfam PF07126 Cell-division protein ZapC 15 180 3.0E-68 T 21-04-2016 IPR009809 Cell division protein ZapC SDY_0919 e77725ba50c7a2c30e8a57261e9cef9e 192 Hamap MF_00906 Cell division protein ZapC [zapC]. 14 190 40.321 T 21-04-2016 IPR009809 Cell division protein ZapC SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.89E-38 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.89E-38 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.89E-38 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Gene3D G3DSA:2.40.50.100 20 82 8.0E-32 T 21-04-2016 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.3E-43 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PANTHER PTHR15893 1 85 2.6E-52 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.952 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 SUPERFAMILY SSF110324 2 81 5.58E-34 T 21-04-2016 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 21-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3366 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Pfam PF01016 Ribosomal L27 protein 2 82 6.3E-39 T 21-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 8.5E-59 T 21-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07670 Nucleoside recognition 92 189 5.2E-7 T 21-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 PANTHER PTHR10590:SF13 1 400 1.2E-260 T 21-04-2016 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 PANTHER PTHR10590 1 400 1.2E-260 T 21-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 1.4E-146 T 21-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SDY_2593 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.7E-21 T 21-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 69.93 T 21-04-2016 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 5.7E-97 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 3.5E-108 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 PIRSF PIRSF001359 1 284 7.9E-112 T 21-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 PANTHER PTHR30304:SF5 1 284 8.3E-162 T 21-04-2016 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.8E-160 T 21-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 Gene3D G3DSA:3.20.20.70 1 284 2.8E-111 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 PANTHER PTHR30304 1 284 8.3E-162 T 21-04-2016 SDY_2269 e91cb13ee046b999a3435cfe8850cd19 284 SUPERFAMILY SSF51569 3 283 4.54E-95 T 21-04-2016 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 Pfam PF00083 Sugar (and other) transporter 1 397 3.3E-124 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 1 394 6.9E-134 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 251 267 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 Gene3D G3DSA:1.20.1250.20 2 145 7.1E-24 T 21-04-2016 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 Gene3D G3DSA:1.20.1250.20 193 395 1.9E-19 T 21-04-2016 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PRINTS PR00171 Sugar transporter signature 322 334 8.9E-15 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PRINTS PR00171 Sugar transporter signature 299 320 8.9E-15 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PRINTS PR00171 Sugar transporter signature 206 216 8.9E-15 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PRINTS PR00171 Sugar transporter signature 53 72 8.9E-15 T 21-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PANTHER PTHR23500 1 407 0.0 T 21-04-2016 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 58 83 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 PANTHER PTHR23500:SF119 1 407 0.0 T 21-04-2016 SDY_3058 380f285fe65914ff2183151968ef1ee2 409 SUPERFAMILY SSF103473 1 396 2.22E-63 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 178 202 3.2E-7 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 57 81 3.2E-7 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 342 366 3.2E-7 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 168 3.2E-7 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PANTHER PTHR23501:SF5 37 450 1.7E-152 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 Gene3D G3DSA:1.20.1250.20 309 450 9.0E-17 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 SUPERFAMILY SSF103473 40 232 3.14E-59 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 SUPERFAMILY SSF103473 288 449 3.14E-59 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 Pfam PF07690 Major Facilitator Superfamily 59 449 2.8E-49 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 Gene3D G3DSA:1.20.1250.20 52 236 6.0E-26 T 21-04-2016 SDY_1976 00d1e0329ce8f87eae88845e3cbcec02 460 PANTHER PTHR23501 37 450 1.7E-152 T 21-04-2016 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 SUPERFAMILY SSF52218 1 148 1.02E-38 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 PANTHER PTHR19384 1 144 1.8E-27 T 21-04-2016 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 Pfam PF00258 Flavodoxin 6 140 2.4E-24 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 PRINTS PR00369 Flavodoxin signature 84 94 2.2E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 PRINTS PR00369 Flavodoxin signature 108 127 2.2E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 PRINTS PR00369 Flavodoxin signature 53 64 2.2E-6 T 21-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SDY_3007 651d9dd0277f92135bc00f3b2e33d0bb 149 Gene3D G3DSA:3.40.50.360 1 148 7.3E-35 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.6E-39 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 Gene3D G3DSA:3.40.390.30 12 153 9.6E-52 T 21-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 21-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 SUPERFAMILY SSF55486 3 151 2.69E-50 T 21-04-2016 SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.4E-37 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 PANTHER PTHR22881 1 154 1.0E-68 T 21-04-2016 SDY_0595 6b832dc6237b2b1c85ad9fb28f2bc4c3 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.615 T 21-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 SUPERFAMILY SSF103515 1 225 1.31E-41 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 SMART SM00869 2 222 1.7E-24 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1 226 3.3E-56 T 21-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 Gene3D G3DSA:2.40.128.130 2 226 5.0E-54 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 Pfam PF03797 Autotransporter beta-domain 1 214 5.8E-39 T 21-04-2016 IPR005546 Autotransporter beta-domain SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 PRINTS PR01484 Pertactin virulence factor family signature 188 213 1.5E-5 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 PRINTS PR01484 Pertactin virulence factor family signature 12 36 1.5E-5 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 PRINTS PR01484 Pertactin virulence factor family signature 122 145 1.5E-5 T 21-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 PANTHER PTHR35037:SF2 1 226 2.4E-171 T 21-04-2016 SDY_0498 5f9f2624219e9becad27e387cf04c8d1 227 PANTHER PTHR35037 1 226 2.4E-171 T 21-04-2016 SDY_0106 4b90a1ea20903ad6f28bf1613839a5bf 91 SUPERFAMILY SSF46689 52 86 9.32E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0106 4b90a1ea20903ad6f28bf1613839a5bf 91 Gene3D G3DSA:1.10.10.60 53 86 3.8E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0106 4b90a1ea20903ad6f28bf1613839a5bf 91 Pfam PF12759 InsA C-terminal domain 43 88 2.9E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0106 4b90a1ea20903ad6f28bf1613839a5bf 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0106 4b90a1ea20903ad6f28bf1613839a5bf 91 PANTHER PTHR33293 2 91 2.2E-33 T 21-04-2016 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 PANTHER PTHR33154 8 99 2.0E-24 T 21-04-2016 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 SMART SM00418 8 86 6.0E-31 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 32 50 - T 21-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 Gene3D G3DSA:1.10.10.10 8 106 1.0E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.6E-17 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 SUPERFAMILY SSF46785 7 106 9.91E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 4.2E-26 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 4.2E-26 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 4.2E-26 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3561 615b8d6af5763aadfeb3716c1f6c5ec0 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 4.2E-26 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 SUPERFAMILY SSF51735 268 299 2.83E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 SUPERFAMILY SSF51735 1 241 2.83E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 Gene3D G3DSA:3.40.50.720 2 211 2.5E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 198 5.5E-20 T 21-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 PANTHER PTHR10366 266 324 2.0E-36 T 21-04-2016 SDY_3089 6d311bad4932178aacbbcbe0e9505dfd 325 PANTHER PTHR10366 4 241 2.0E-36 T 21-04-2016 SDY_1317 e95dcf69c366ac7c00165adc12060f86 132 Pfam PF03061 Thioesterase superfamily 26 97 6.9E-18 T 21-04-2016 IPR006683 Thioesterase domain SDY_1317 e95dcf69c366ac7c00165adc12060f86 132 PANTHER PTHR11049:SF5 1 130 4.0E-77 T 21-04-2016 SDY_1317 e95dcf69c366ac7c00165adc12060f86 132 PANTHER PTHR11049 1 130 4.0E-77 T 21-04-2016 SDY_1317 e95dcf69c366ac7c00165adc12060f86 132 Gene3D G3DSA:3.10.129.10 5 130 3.3E-41 T 21-04-2016 IPR029069 HotDog domain SDY_1317 e95dcf69c366ac7c00165adc12060f86 132 SUPERFAMILY SSF54637 7 130 2.9E-36 T 21-04-2016 IPR029069 HotDog domain SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 4.0E-29 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 Gene3D G3DSA:1.10.10.610 1 72 2.2E-37 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.59 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 PIRSF PIRSF006169 1 72 3.7E-36 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 SUPERFAMILY SSF118001 1 71 4.97E-28 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_3516 0bfdcc8fec80a4507633bb60417726e3 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 2.0E-34 T 21-04-2016 IPR010648 Uncharacterised protein family UPF0270 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 SUPERFAMILY SSF53850 29 305 3.39E-47 T 21-04-2016 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 PANTHER PTHR30024 1 306 4.0E-152 T 21-04-2016 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 Pfam PF09084 NMT1/THI5 like 68 183 8.4E-11 T 21-04-2016 IPR015168 SsuA/THI5-like SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 Gene3D G3DSA:3.40.190.10 110 229 1.1E-31 T 21-04-2016 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 305 5.1E-83 T 21-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 PANTHER PTHR30024:SF11 1 306 4.0E-152 T 21-04-2016 SDY_2320 9ae3bb4bf511d8ef0fa9320a5dacff54 330 SMART SM00062 28 249 4.4E-28 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 Pfam PF07690 Major Facilitator Superfamily 14 341 2.1E-42 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 Gene3D G3DSA:1.20.1250.20 200 377 2.3E-13 T 21-04-2016 SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 Gene3D G3DSA:1.20.1250.20 7 189 9.2E-30 T 21-04-2016 SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 382 3.7E-148 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 SUPERFAMILY SSF103473 5 379 8.63E-60 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 PANTHER PTHR23502:SF28 7 401 4.1E-219 T 21-04-2016 SDY_1886 3c5aa711e7f1cb2a8e7d50d56308b908 403 PANTHER PTHR23502 7 401 4.1E-219 T 21-04-2016 SDY_4503 2c87aa08ee2ab8b82c0df6ec510cff2c 449 Pfam PF00860 Permease family 26 409 1.8E-88 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_4503 2c87aa08ee2ab8b82c0df6ec510cff2c 449 PANTHER PTHR11119:SF42 13 444 0.0 T 21-04-2016 SDY_4503 2c87aa08ee2ab8b82c0df6ec510cff2c 449 PANTHER PTHR11119 13 444 0.0 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_3171 4ec8b83c01be9a42632389be43690bdf 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 36.464 T 21-04-2016 IPR023771 Cell division protein ZapA, eubacteria SDY_3171 4ec8b83c01be9a42632389be43690bdf 109 SUPERFAMILY SSF102829 6 94 1.01E-25 T 21-04-2016 IPR007838 Cell division protein ZapA-like SDY_3171 4ec8b83c01be9a42632389be43690bdf 109 PANTHER PTHR34981 2 109 8.4E-32 T 21-04-2016 SDY_3171 4ec8b83c01be9a42632389be43690bdf 109 Pfam PF05164 Cell division protein ZapA 6 90 4.2E-20 T 21-04-2016 IPR007838 Cell division protein ZapA-like SDY_3171 4ec8b83c01be9a42632389be43690bdf 109 PANTHER PTHR34981:SF1 2 109 8.4E-32 T 21-04-2016 SDY_2341 f54b03733b9accf07b649354c09ff99e 60 SUPERFAMILY SSF158997 1 55 6.93E-20 T 21-04-2016 SDY_2341 f54b03733b9accf07b649354c09ff99e 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.895 T 21-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SDY_2341 f54b03733b9accf07b649354c09ff99e 60 PANTHER PTHR33505 1 60 3.3E-28 T 21-04-2016 SDY_2341 f54b03733b9accf07b649354c09ff99e 60 Gene3D G3DSA:2.20.25.10 8 59 5.3E-24 T 21-04-2016 SDY_2341 f54b03733b9accf07b649354c09ff99e 60 Pfam PF03966 Trm112p-like protein 2 41 1.5E-8 T 21-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 SDY_4372 65e4b57da9438f777916b51b04decc67 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 3.6E-59 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4372 65e4b57da9438f777916b51b04decc67 149 Gene3D G3DSA:3.10.430.100 61 149 2.0E-28 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 Gene3D G3DSA:3.40.5.10 1 52 1.5E-25 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 PANTHER PTHR21368 1 149 2.0E-53 T 21-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4372 65e4b57da9438f777916b51b04decc67 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.5E-25 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 SUPERFAMILY SSF55658 1 57 3.31E-19 T 21-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 SUPERFAMILY SSF55653 60 149 1.09E-25 T 21-04-2016 IPR020069 Ribosomal protein L9, C-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 2.1E-22 T 21-04-2016 IPR020070 Ribosomal protein L9, N-terminal SDY_4372 65e4b57da9438f777916b51b04decc67 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.68 T 21-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 3.4E-32 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.4E-32 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 3.4E-32 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 3.4E-32 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PANTHER PTHR11766 4 423 1.1E-223 T 21-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 21-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 4.0E-94 T 21-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Gene3D G3DSA:1.10.240.10 238 321 2.7E-43 T 21-04-2016 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 4.4E-152 T 21-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 SUPERFAMILY SSF55174 327 423 1.57E-20 T 21-04-2016 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Pfam PF01479 S4 domain 359 403 3.9E-6 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Gene3D G3DSA:3.40.50.620 4 237 1.8E-104 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 SMART SM00363 358 419 3.5E-8 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 PANTHER PTHR11766:SF0 4 423 1.1E-223 T 21-04-2016 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 SUPERFAMILY SSF52374 4 328 1.04E-110 T 21-04-2016 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.858 T 21-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 SDY_1860 9e1e8231dccb2446171a3b16c35e1db3 424 Gene3D G3DSA:3.10.290.10 322 423 2.2E-30 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 Gene3D G3DSA:3.30.420.80 9 129 1.4E-54 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 PANTHER PTHR11759 11 129 5.7E-74 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 21-04-2016 IPR018102 Ribosomal S11, conserved site SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 21-04-2016 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 21-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 PIRSF PIRSF002131 1 129 5.9E-53 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SDY_3473 b3f2d60e9479262be013fc0afb0be596 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 21-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 PANTHER PTHR30461 1 180 2.1E-47 T 21-04-2016 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 PANTHER PTHR30461:SF9 1 180 2.1E-47 T 21-04-2016 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 Pfam PF00239 Resolvase, N terminal domain 4 142 6.9E-44 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 ProSitePatterns PS00398 Site-specific recombinases signature 2. 61 73 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 SMART SM00857 3 142 4.8E-59 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 Gene3D G3DSA:3.40.50.1390 3 125 1.1E-40 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_1312 495c0eaf5a2370d78dace8b420d11cff 183 SUPERFAMILY SSF53041 1 142 5.62E-45 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 Pfam PF01381 Helix-turn-helix 38 80 1.4E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 PANTHER PTHR36511:SF1 1 95 1.6E-75 T 21-04-2016 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 PANTHER PTHR36511 1 95 1.6E-75 T 21-04-2016 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 Gene3D G3DSA:1.10.260.40 37 88 1.0E-11 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 SMART SM00530 37 91 9.5E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4348 f482944325ae85c7e9a4624ec771d036 96 SUPERFAMILY SSF47413 38 82 3.22E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4016 76433cfb2538287af91def5104e0ca64 460 SUPERFAMILY SSF52540 77 348 1.44E-90 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4016 76433cfb2538287af91def5104e0ca64 460 PANTHER PTHR15184:SF44 1 460 0.0 T 21-04-2016 SDY_4016 76433cfb2538287af91def5104e0ca64 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.035 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 SUPERFAMILY SSF47917 345 459 2.07E-55 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 SMART SM00382 142 327 4.5E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4016 76433cfb2538287af91def5104e0ca64 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 SUPERFAMILY SSF50615 3 75 2.62E-24 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.9E-20 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 Gene3D G3DSA:1.10.1140.10 345 460 4.1E-58 T 21-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 Gene3D G3DSA:3.40.50.300 77 343 3.7E-109 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4016 76433cfb2538287af91def5104e0ca64 460 Gene3D G3DSA:2.40.10.170 2 75 5.9E-30 T 21-04-2016 SDY_4016 76433cfb2538287af91def5104e0ca64 460 PANTHER PTHR15184 1 460 0.0 T 21-04-2016 SDY_4016 76433cfb2538287af91def5104e0ca64 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.6E-64 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4016 76433cfb2538287af91def5104e0ca64 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 5.3E-264 T 21-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.8E-94 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PANTHER PTHR30381 2 365 1.3E-234 T 21-04-2016 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 Pfam PF02119 Flagellar P-ring protein 21 364 4.2E-137 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 PANTHER PTHR30381:SF1 2 365 1.3E-234 T 21-04-2016 SDY_2071 d63374a1eafd9fadbf1068f3431a6374 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 365 39.995 T 21-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 21-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 SUPERFAMILY SSF53720 2 331 1.7E-93 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 PANTHER PTHR11699:SF197 1 333 7.4E-231 T 21-04-2016 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 Pfam PF00171 Aldehyde dehydrogenase family 9 330 9.6E-87 T 21-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 PANTHER PTHR11699 1 333 7.4E-231 T 21-04-2016 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 Gene3D G3DSA:3.40.309.10 256 331 8.9E-18 T 21-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 21-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SDY_1531 acefabda34c4b82930ea45c78b9cf0f2 333 Gene3D G3DSA:3.40.605.10 3 255 7.0E-75 T 21-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SDY_3772 44a7a34525cc88ce2b2ad2c98df0e2b7 202 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 21 193 4.3E-53 T 21-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SDY_3772 44a7a34525cc88ce2b2ad2c98df0e2b7 202 Gene3D G3DSA:2.30.30.330 19 197 4.9E-63 T 21-04-2016 SDY_3772 44a7a34525cc88ce2b2ad2c98df0e2b7 202 SUPERFAMILY SSF54001 19 195 1.3E-51 T 21-04-2016 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 SUPERFAMILY SSF52540 8 205 2.58E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-39 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 PANTHER PTHR10285 1 213 1.8E-96 T 21-04-2016 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 Gene3D G3DSA:3.40.50.300 3 205 6.3E-71 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 9.6E-45 T 21-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 42.04 T 21-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_2196 4ed5676e1b1bfa82b39a8a407f81fffd 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.9E-98 T 21-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 Pfam PF03466 LysR substrate binding domain 4 166 7.6E-24 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 SUPERFAMILY SSF53850 3 169 4.89E-27 T 21-04-2016 SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 Gene3D G3DSA:3.40.190.10 3 50 1.6E-10 T 21-04-2016 SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 Gene3D G3DSA:3.40.190.10 51 135 3.2E-23 T 21-04-2016 SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 PANTHER PTHR30537 1 180 5.8E-121 T 21-04-2016 SDY_3243 8c8e4e41fe7e36d8dfe2968ceb7f270e 180 PANTHER PTHR30537:SF18 1 180 5.8E-121 T 21-04-2016 SDY_0205 caed960c01e722ab2fde40ba4664b1ea 110 SUPERFAMILY SSF54593 2 110 1.34E-26 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_0205 caed960c01e722ab2fde40ba4664b1ea 110 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 108 2.7E-18 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SDY_0205 caed960c01e722ab2fde40ba4664b1ea 110 Gene3D G3DSA:3.10.180.10 2 110 7.5E-30 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.1E-14 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PANTHER PTHR10909:SF305 1 380 5.5E-156 T 21-04-2016 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:2.40.110.10 123 217 3.4E-23 T 21-04-2016 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PANTHER PTHR10909 1 380 5.5E-156 T 21-04-2016 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.10.540.10 1 110 7.2E-19 T 21-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.9E-21 T 21-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 5.0E-46 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.20.140.10 218 380 3.9E-51 T 21-04-2016 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 91.978 T 21-04-2016 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA GO:0009437|GO:0016627|GO:0055114 UniPathway: UPA00117 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF56645 1 227 3.27E-52 T 21-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF47203 226 379 1.93E-45 T 21-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SDY_0061 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 21-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Pfam PF00394 Multicopper oxidase 227 292 1.2E-5 T 21-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Gene3D G3DSA:2.60.40.420 33 170 1.8E-33 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Gene3D G3DSA:2.60.40.420 171 320 1.6E-31 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 PANTHER PTHR11709:SF2 47 516 7.4E-124 T 21-04-2016 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 SUPERFAMILY SSF49503 32 167 6.03E-31 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Gene3D G3DSA:2.60.40.420 352 516 1.5E-30 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 ProSitePatterns PS00080 Multicopper oxidases signature 2. 499 510 - T 21-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Pfam PF07732 Multicopper oxidase 56 165 4.5E-31 T 21-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 SUPERFAMILY SSF49503 172 288 1.17E-32 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 SUPERFAMILY SSF49503 374 396 1.17E-32 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 Pfam PF07731 Multicopper oxidase 402 516 4.5E-23 T 21-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 SUPERFAMILY SSF49503 348 516 7.7E-31 T 21-04-2016 IPR008972 Cupredoxin SDY_0030 d82126dc5c68c2c6310f2c93ca849e3b 516 PANTHER PTHR11709 47 516 7.4E-124 T 21-04-2016 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 SUPERFAMILY SSF110395 3 245 1.15E-77 T 21-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.953 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 Pfam PF03932 CutC family 3 200 1.6E-85 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 PANTHER PTHR12598:SF0 1 244 1.9E-106 T 21-04-2016 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 Gene3D G3DSA:3.20.20.380 1 244 1.7E-94 T 21-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SDY_1178 28002a44d4cee77530d6fa0ed03be7fd 248 PANTHER PTHR12598 1 244 1.9E-106 T 21-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 PANTHER PTHR30073:SF5 1 330 1.6E-200 T 21-04-2016 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 6.4E-201 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.138 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 SUPERFAMILY SSF55681 7 329 3.55E-98 T 21-04-2016 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 Gene3D G3DSA:3.30.930.10 2 326 5.6E-153 T 21-04-2016 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 PIRSF PIRSF001555 1 329 5.4E-151 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.3E-93 T 21-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SDY_4004 4a004a2a971383480795fd5cfae923d8 330 PANTHER PTHR30073 1 330 1.6E-200 T 21-04-2016 SDY_0761 0969c0128128821bbceef33e621b54c6 249 PANTHER PTHR10953 2 249 3.3E-93 T 21-04-2016 SDY_0761 0969c0128128821bbceef33e621b54c6 249 Pfam PF00899 ThiF family 12 244 4.0E-64 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_0761 0969c0128128821bbceef33e621b54c6 249 SUPERFAMILY SSF69572 3 248 3.53E-87 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_0761 0969c0128128821bbceef33e621b54c6 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 1.4E-136 T 21-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0761 0969c0128128821bbceef33e621b54c6 249 Gene3D G3DSA:3.40.50.720 3 249 5.1E-79 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 PANTHER PTHR30290:SF30 119 550 5.3E-205 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 PANTHER PTHR30290:SF30 22 81 5.3E-205 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 552 67.445 T 21-04-2016 IPR023767 Transcriptional regulator SgrR SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Gene3D G3DSA:3.40.190.10 267 308 1.2E-5 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 PANTHER PTHR30290 119 550 5.3E-205 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 PANTHER PTHR30290 22 81 5.3E-205 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 3.6E-42 T 21-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Gene3D G3DSA:1.10.10.10 22 97 2.5E-4 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 SUPERFAMILY SSF53850 121 546 1.14E-65 T 21-04-2016 SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 1.8E-19 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_0097 efcdee20b39d3d62ae3b3844505bcada 552 Gene3D G3DSA:3.90.76.10 133 266 4.4E-23 T 21-04-2016 SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 1.4E-8 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 SUPERFAMILY SSF161098 90 277 7.19E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.1E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 PANTHER PTHR30465:SF49 7 292 1.9E-191 T 21-04-2016 SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 PANTHER PTHR30465 7 292 1.9E-191 T 21-04-2016 SDY_1379 1b178f1ae815a3de56fff1bab90d4a91 296 Gene3D G3DSA:1.10.3720.10 86 290 2.4E-17 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 PANTHER PTHR30346 1 305 1.7E-156 T 21-04-2016 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 90 175 2.1E-18 T 21-04-2016 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF46785 1 86 9.99E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:1.10.10.10 1 84 2.7E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.6E-21 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF53850 89 295 4.5E-47 T 21-04-2016 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 176 267 2.0E-37 T 21-04-2016 SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF03466 LysR substrate binding domain 89 293 5.4E-54 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3796 01f7ef453121c0bb818ead6a5da9a2b6 305 PANTHER PTHR30346:SF15 1 305 1.7E-156 T 21-04-2016 SDY_3528 29e426187f3b2d75f464f93349cae78b 108 SUPERFAMILY SSF50022 1 107 3.71E-35 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SDY_3528 29e426187f3b2d75f464f93349cae78b 108 Gene3D G3DSA:2.102.10.10 2 107 2.7E-40 T 21-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SDY_3528 29e426187f3b2d75f464f93349cae78b 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 3.4E-41 T 21-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 SDY_3528 29e426187f3b2d75f464f93349cae78b 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 6.4E-40 T 21-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 SDY_3528 29e426187f3b2d75f464f93349cae78b 108 PANTHER PTHR40562 1 108 8.5E-71 T 21-04-2016 SDY_4371 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 21-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 PANTHER PTHR13479 2 74 1.6E-34 T 21-04-2016 SDY_4371 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4371 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 21-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 SUPERFAMILY SSF52151 4 122 4.45E-81 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 SUPERFAMILY SSF52151 190 308 4.45E-81 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.3E-136 T 21-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 Pfam PF00698 Acyl transferase domain 6 282 1.5E-38 T 21-04-2016 IPR014043 Acyl transferase SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 Gene3D G3DSA:3.40.366.10 197 298 6.5E-71 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 Gene3D G3DSA:3.40.366.10 3 122 6.5E-71 T 21-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 PIRSF PIRSF000446 1 309 1.1E-145 T 21-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 PANTHER PTHR10982 1 298 1.1E-159 T 21-04-2016 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 Gene3D G3DSA:3.30.70.250 125 196 1.3E-32 T 21-04-2016 SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 3.2E-37 T 21-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SDY_2058 a7fa9e9f0ec1927c455f66514817550b 309 SUPERFAMILY SSF55048 128 197 2.62E-18 T 21-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 SUPERFAMILY SSF53822 68 338 4.91E-92 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 Gene3D G3DSA:1.10.260.40 10 65 1.4E-20 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 Gene3D G3DSA:3.40.50.2300 174 338 4.5E-68 T 21-04-2016 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 PANTHER PTHR30146 9 339 5.5E-154 T 21-04-2016 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 Gene3D G3DSA:3.40.50.2300 66 173 7.8E-31 T 21-04-2016 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 PANTHER PTHR30146:SF4 9 339 5.5E-154 T 21-04-2016 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.6E-19 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 4.0E-44 T 21-04-2016 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 SUPERFAMILY SSF47413 10 67 7.88E-15 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3803 58396a7e990084ae8bf00a9d831f957c 341 SMART SM00354 9 79 1.1E-30 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 SUPERFAMILY SSF103473 4 385 1.96E-39 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 Gene3D G3DSA:1.20.1250.20 208 381 5.8E-12 T 21-04-2016 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 PANTHER PTHR23514 1 388 1.1E-101 T 21-04-2016 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 Gene3D G3DSA:1.20.1250.20 6 183 2.7E-16 T 21-04-2016 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 PANTHER PTHR23514:SF3 1 388 1.1E-101 T 21-04-2016 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 Pfam PF07690 Major Facilitator Superfamily 14 320 1.8E-21 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3526 5567d2ee6cd2f859c1df669e705d966f 393 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 31.122 T 21-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA SDY_1524 88bb7ddf9060084653764fb96dfbea3b 235 PANTHER PTHR12677 1 235 4.6E-158 T 21-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SDY_1524 88bb7ddf9060084653764fb96dfbea3b 235 Pfam PF09335 SNARE associated Golgi protein 80 197 8.0E-25 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_1524 88bb7ddf9060084653764fb96dfbea3b 235 PANTHER PTHR12677:SF20 1 235 4.6E-158 T 21-04-2016 SDY_3568 c2a2a507453813d4db15fd2112a4401d 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.999 T 21-04-2016 IPR019598 Universal stress protein B SDY_3568 c2a2a507453813d4db15fd2112a4401d 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 6.3E-55 T 21-04-2016 IPR019598 Universal stress protein B SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 21-04-2016 IPR029760 Glutathione peroxidase conserved site SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PANTHER PTHR11592:SF40 1 182 2.8E-94 T 21-04-2016 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 Gene3D G3DSA:3.40.30.10 5 182 3.9E-63 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 21-04-2016 IPR029759 Glutathione peroxidase active site SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PIRSF PIRSF000303 1 183 3.0E-64 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.3E-19 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.3E-19 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.3E-19 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 SUPERFAMILY SSF52833 6 182 3.92E-54 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 Pfam PF00255 Glutathione peroxidase 7 111 1.9E-46 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_1805 8387e4d6f973d26cfe25cedc08bdb540 183 PANTHER PTHR11592 1 182 2.8E-94 T 21-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 Gene3D G3DSA:2.40.33.40 1 119 1.7E-45 T 21-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 SUPERFAMILY SSF141530 4 119 1.02E-37 T 21-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 8.0E-62 T 21-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 1.1E-38 T 21-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 TIGRFAM TIGR00849 gutA: PTS system, glucitol/sorbitol-specific IIA component 1 123 3.5E-60 T 21-04-2016 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2901 4f1a35afc1898ada6bd3bedb4cd379bd 123 PANTHER PTHR40398 2 123 7.9E-49 T 21-04-2016 SDY_0781 1f42062652e327a66a7fccdab455504e 171 PANTHER PTHR35892:SF3 2 171 2.2E-129 T 21-04-2016 SDY_0781 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.7E-39 T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.7E-39 T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 1.7E-39 T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 1.7E-39 T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 SUPERFAMILY SSF56925 27 171 2.62E-34 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_0781 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 21-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 SDY_0781 1f42062652e327a66a7fccdab455504e 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 3.7E-23 T 21-04-2016 IPR027385 Outer membrane protein beta-barrel SDY_0781 1f42062652e327a66a7fccdab455504e 171 PANTHER PTHR35892 2 171 2.2E-129 T 21-04-2016 SDY_0781 1f42062652e327a66a7fccdab455504e 171 Gene3D G3DSA:2.40.160.20 26 171 2.4E-46 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 21-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.352 T 21-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 PANTHER PTHR19836 1 101 3.8E-62 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 Gene3D G3DSA:4.10.830.10 41 101 2.8E-31 T 21-04-2016 SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 9.5E-27 T 21-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3483 7db5f0a9ed08d687fd023064e70bb876 101 SUPERFAMILY SSF57716 2 101 8.55E-38 T 21-04-2016 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 SMART SM00855 5 191 2.7E-28 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.8E-30 T 21-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 SUPERFAMILY SSF53254 4 247 1.26E-77 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.776 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 21-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.0E-129 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 Gene3D G3DSA:3.40.50.1240 2 250 5.4E-99 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0702 59c89c6001941a1cc83a7f6cc7fa3a1d 250 PANTHER PTHR11931 1 250 7.1E-170 T 21-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SDY_1637 47c151a3f44a870f07f31ac8cc1a04a1 81 ProDom PD059807 YMJA ECS1872 1 81 5.0E-42 T 21-04-2016 IPR020251 Uncharacterised protein family, YmjA SDY_1637 47c151a3f44a870f07f31ac8cc1a04a1 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 9.6E-49 T 21-04-2016 IPR020251 Uncharacterised protein family, YmjA SDY_2687 03976b836c485a5ee89901e09d2fb723 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.1E-90 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SDY_2687 03976b836c485a5ee89901e09d2fb723 208 Gene3D G3DSA:3.40.50.2020 2 208 5.0E-75 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_2687 03976b836c485a5ee89901e09d2fb723 208 SUPERFAMILY SSF53271 4 206 3.02E-66 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_2687 03976b836c485a5ee89901e09d2fb723 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.7E-65 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_2687 03976b836c485a5ee89901e09d2fb723 208 PANTHER PTHR10285 1 197 3.6E-103 T 21-04-2016 SDY_2687 03976b836c485a5ee89901e09d2fb723 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 21-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 21-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.5E-86 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 Pfam PF01081 KDPG and KHG aldolase 9 203 9.6E-94 T 21-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 PANTHER PTHR30246:SF0 1 212 2.5E-133 T 21-04-2016 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 21-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 SUPERFAMILY SSF51569 3 209 8.42E-69 T 21-04-2016 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 Gene3D G3DSA:3.20.20.70 2 210 1.0E-77 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1136 e5d9c891c35a6b6ffa42bad339ac8a9f 213 PANTHER PTHR30246 1 212 2.5E-133 T 21-04-2016 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 Gene3D G3DSA:3.90.76.10 39 219 3.8E-50 T 21-04-2016 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 Gene3D G3DSA:3.10.105.10 288 505 5.6E-69 T 21-04-2016 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 PIRSF PIRSF002741 21 535 1.4E-121 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 PANTHER PTHR30290:SF14 1 535 1.8E-236 T 21-04-2016 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 PANTHER PTHR30290 1 535 1.8E-236 T 21-04-2016 SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 6.8E-108 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_4567 fd23a0859f6cf3c63f0ea9cac7df8eaa 535 SUPERFAMILY SSF53850 29 534 1.54E-162 T 21-04-2016 SDY_2281 71da5afd11418613e9066f4582704b64 112 Pfam PF11776 Nickel/cobalt transporter regulator 52 101 9.0E-20 T 21-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SDY_2281 71da5afd11418613e9066f4582704b64 112 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 33 101 1.0E-36 T 21-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB SDY_4255a c75cac06f123e27bdcfe5ea3b5ca7eef 128 Gene3D G3DSA:1.20.120.10 23 128 5.7E-46 T 21-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SDY_4255a c75cac06f123e27bdcfe5ea3b5ca7eef 128 SUPERFAMILY SSF47175 23 128 5.89E-35 T 21-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SDY_4255a c75cac06f123e27bdcfe5ea3b5ca7eef 128 PIRSF PIRSF000029 1 128 8.1E-64 T 21-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 SDY_4255a c75cac06f123e27bdcfe5ea3b5ca7eef 128 Pfam PF07361 Cytochrome b562 24 128 1.1E-32 T 21-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 SDY_2533 f37f4a46354f6653dbe215796cf49a0e 162 SUPERFAMILY SSF49401 32 162 2.24E-24 T 21-04-2016 IPR008966 Adhesion domain SDY_2533 f37f4a46354f6653dbe215796cf49a0e 162 Gene3D G3DSA:2.60.40.1090 22 162 1.1E-11 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2533 f37f4a46354f6653dbe215796cf49a0e 162 Pfam PF00419 Fimbrial protein 23 162 5.9E-18 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 SUPERFAMILY SSF52949 3 172 2.35E-63 T 21-04-2016 SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 Pfam PF01661 Macro domain 21 137 7.1E-40 T 21-04-2016 IPR002589 Macro domain SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 Gene3D G3DSA:3.40.220.10 3 174 4.4E-69 T 21-04-2016 SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 SMART SM00506 4 137 1.6E-56 T 21-04-2016 IPR002589 Macro domain SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 PANTHER PTHR11106 4 171 2.3E-83 T 21-04-2016 SDY_2305 4118ab53638ec3672f82cbddfb72988a 177 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 47.449 T 21-04-2016 IPR024900 O-acetyl-ADP-ribose deacetylase SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 SUPERFAMILY SSF50891 173 288 1.33E-11 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 Pfam PF02626 Allophanate hydrolase subunit 2 25 281 1.0E-92 T 21-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 Gene3D G3DSA:2.40.100.10 231 295 5.5E-4 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 SMART SM00797 23 298 1.8E-147 T 21-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 1.3E-143 T 21-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SDY_0647 d00069ceef3130cd4e410c1c2c29f7ae 310 PANTHER PTHR18866 139 261 3.5E-42 T 21-04-2016 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 9.0E-41 T 21-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 87 8.0E-33 T 21-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 6.9E-24 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 8.9E-62 T 21-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 SUPERFAMILY SSF56214 3 125 8.63E-30 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 Gene3D G3DSA:3.90.470.20 1 125 1.0E-41 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2804 08641a38985eebb42b16b226d6ee8779 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.723 T 21-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_0228 6020018d36eb90017cf74c1d70c9842e 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 54.218 T 21-04-2016 IPR022958 Uncharacterised protein family UPF0294 SDY_0228 6020018d36eb90017cf74c1d70c9842e 266 SUPERFAMILY SSF56219 44 260 1.7E-26 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0228 6020018d36eb90017cf74c1d70c9842e 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 5.4E-9 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0228 6020018d36eb90017cf74c1d70c9842e 266 Gene3D G3DSA:3.60.10.10 39 233 5.9E-7 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 SUPERFAMILY SSF100950 1 263 1.72E-104 T 21-04-2016 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 7.1E-22 T 21-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.7E-143 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.712 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 PANTHER PTHR11280 1 263 1.3E-178 T 21-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 21-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SDY_0612 5f0c6acbd5da52d372dda89f92c23f29 266 Gene3D G3DSA:3.40.50.1360 1 264 3.3E-112 T 21-04-2016 SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 PANTHER PTHR30213:SF0 10 290 8.7E-112 T 21-04-2016 SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 281 23.458 T 21-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 Pfam PF03631 Virulence factor BrkB 29 274 7.4E-57 T 21-04-2016 IPR017039 Virulence factor BrkB SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 PANTHER PTHR30213 10 290 8.7E-112 T 21-04-2016 SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 PIRSF PIRSF035875 2 290 4.1E-73 T 21-04-2016 IPR017039 Virulence factor BrkB SDY_3857 2ab67f99e9eac535d94aa6e882142578 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 3.0E-106 T 21-04-2016 IPR017039 Virulence factor BrkB SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:1.20.150.20 383 510 3.6E-49 T 21-04-2016 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.4E-74 T 21-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF52540 96 381 9.43E-95 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF47917 383 511 4.19E-46 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.882 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 PANTHER PTHR15184 1 496 1.6E-293 T 21-04-2016 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 PANTHER PTHR15184:SF3 1 496 1.6E-293 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-45 T 21-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-113 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 21-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 21-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.6E-262 T 21-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_4014 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:2.40.30.20 1 93 3.5E-29 T 21-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 PANTHER PTHR33515 1 133 1.3E-54 T 21-04-2016 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 2.4E-45 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 SUPERFAMILY SSF89919 2 107 4.97E-36 T 21-04-2016 IPR023799 Ribosome-binding factor A domain SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 21-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.3E-32 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.311 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 9.0E-48 T 21-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SDY_3346 3bd4474276d81e34a5f41940e5023c8f 133 Gene3D G3DSA:3.30.300.20 1 107 9.5E-40 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_1566 05acbe3d311e2abef6687b7fac8ea677 284 PANTHER PTHR38095:SF1 2 284 3.3E-205 T 21-04-2016 SDY_1566 05acbe3d311e2abef6687b7fac8ea677 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 7.8E-115 T 21-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SDY_1566 05acbe3d311e2abef6687b7fac8ea677 284 PANTHER PTHR38095 2 284 3.3E-205 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043:SF4 172 278 5.3E-200 T 21-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043:SF4 297 338 5.3E-200 T 21-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043:SF4 1 139 5.3E-200 T 21-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 Gene3D G3DSA:3.40.190.10 131 215 5.6E-12 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 291 1.5E-112 T 21-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 3 254 2.2E-93 T 21-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 Gene3D G3DSA:3.40.190.10 55 130 9.2E-5 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 5.9E-71 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043 172 278 5.3E-200 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043 297 338 5.3E-200 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 PANTHER PTHR30043 1 139 5.3E-200 T 21-04-2016 SDY_4112 41b6061c31f6eae6d217261d34eee960 338 SUPERFAMILY SSF53850 54 244 9.27E-44 T 21-04-2016 SDY_4537 25a0d35dec3cdc852db50bd7f9d50345 125 PANTHER PTHR33293 1 124 1.1E-41 T 21-04-2016 SDY_4537 25a0d35dec3cdc852db50bd7f9d50345 125 Pfam PF03400 IS1 transposase 1 125 1.6E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3819 94a3eaf73454c249034860575bc1b891 336 PANTHER PTHR30447:SF0 1 336 5.9E-187 T 21-04-2016 SDY_3819 94a3eaf73454c249034860575bc1b891 336 PANTHER PTHR30447 1 336 5.9E-187 T 21-04-2016 SDY_3819 94a3eaf73454c249034860575bc1b891 336 PIRSF PIRSF004532 1 333 4.4E-143 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SDY_3819 94a3eaf73454c249034860575bc1b891 336 SUPERFAMILY SSF56655 2 325 3.48E-112 T 21-04-2016 SDY_3819 94a3eaf73454c249034860575bc1b891 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 335 5.4E-189 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SDY_3819 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 1 170 1.5E-70 T 21-04-2016 SDY_3819 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 171 332 6.1E-49 T 21-04-2016 SDY_3819 94a3eaf73454c249034860575bc1b891 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 4.0E-133 T 21-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SDY_3696 d024c79b0fc3b8feba91091e15fc7fe6 301 Gene3D G3DSA:3.40.190.10 76 208 3.0E-66 T 21-04-2016 SDY_3696 d024c79b0fc3b8feba91091e15fc7fe6 301 Gene3D G3DSA:1.10.10.10 25 75 6.8E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3696 d024c79b0fc3b8feba91091e15fc7fe6 301 SUPERFAMILY SSF53850 74 301 1.5E-82 T 21-04-2016 SDY_3696 d024c79b0fc3b8feba91091e15fc7fe6 301 Pfam PF14503 YhfZ C-terminal domain 75 301 3.7E-84 T 21-04-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain SDY_3696 d024c79b0fc3b8feba91091e15fc7fe6 301 Pfam PF14502 Helix-turn-helix domain 24 71 5.0E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2404 70563109a451dc689384814cec661e65 242 PANTHER PTHR24220:SF495 4 241 1.1E-178 T 21-04-2016 SDY_2404 70563109a451dc689384814cec661e65 242 SUPERFAMILY SSF52540 3 232 1.14E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2404 70563109a451dc689384814cec661e65 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2404 70563109a451dc689384814cec661e65 242 SMART SM00382 27 218 5.0E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2404 70563109a451dc689384814cec661e65 242 Pfam PF00005 ABC transporter 20 170 5.0E-35 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2404 70563109a451dc689384814cec661e65 242 PIRSF PIRSF039085 1 242 8.2E-85 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SDY_2404 70563109a451dc689384814cec661e65 242 Gene3D G3DSA:3.40.50.300 3 237 5.6E-74 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2404 70563109a451dc689384814cec661e65 242 PANTHER PTHR24220 4 241 1.1E-178 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.4E-171 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 SUPERFAMILY SSF53187 292 373 2.17E-65 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 SUPERFAMILY SSF53187 5 178 2.17E-65 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 SUPERFAMILY SSF55031 179 286 4.93E-28 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 PANTHER PTHR11014 4 374 2.2E-100 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.7E-43 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Gene3D G3DSA:3.40.630.10 316 373 1.5E-75 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Gene3D G3DSA:3.40.630.10 5 187 1.5E-75 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 PANTHER PTHR11014:SF106 4 374 2.2E-100 T 21-04-2016 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Gene3D G3DSA:3.30.70.360 188 288 2.0E-33 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.9E-24 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 21-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SDY_2656 ddeb71fb35a8665454eca3d0b4d3c35b 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 51.901 T 21-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 SUPERFAMILY SSF46767 86 169 6.67E-34 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 2.7E-35 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 80 1.1E-17 T 21-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.5E-38 T 21-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 21-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 Gene3D G3DSA:1.10.10.10 86 168 3.7E-37 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 PANTHER PTHR10815:SF5 1 167 2.3E-58 T 21-04-2016 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 PANTHER PTHR10815 1 167 2.3E-58 T 21-04-2016 SDY_1416 6027d3917411dbc6ac9ee38cf8123361 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 169 39.818 T 21-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 SMART SM01103 3 86 4.3E-40 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 PANTHER PTHR31846 1 96 3.2E-44 T 21-04-2016 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-22 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 1.2E-43 T 21-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 Gene3D G3DSA:3.30.110.60 1 94 3.5E-34 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 8.0E-44 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SDY_3361 18acb92da940db4ca8f2a7bc7d7e0f77 97 SUPERFAMILY SSF75471 1 94 6.15E-31 T 21-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 21-04-2016 IPR001882 Biotin-binding site SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 Pfam PF00364 Biotin-requiring enzyme 83 155 4.5E-25 T 21-04-2016 IPR000089 Biotin/lipoyl attachment SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 Gene3D G3DSA:2.40.50.100 80 156 3.2E-32 T 21-04-2016 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 5.4E-72 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 7.2E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 7.2E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 7.2E-18 T 21-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 SUPERFAMILY SSF51230 81 156 6.28E-26 T 21-04-2016 IPR011053 Single hybrid motif SDY_3432 e778a43c8ceae3c28d0b7601f81e6552 156 PANTHER PTHR23151 1 156 8.8E-53 T 21-04-2016 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 Gene3D G3DSA:1.20.1250.20 10 186 3.3E-30 T 21-04-2016 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 Gene3D G3DSA:1.20.1250.20 201 379 1.3E-13 T 21-04-2016 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 Pfam PF07690 Major Facilitator Superfamily 15 348 2.5E-46 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 PANTHER PTHR23502:SF19 6 379 2.7E-94 T 21-04-2016 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 PANTHER PTHR23502 6 379 2.7E-94 T 21-04-2016 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 374 3.2E-80 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SDY_1375 76e9a50a445a1db11da4bab3db960a41 383 SUPERFAMILY SSF103473 8 375 1.57E-61 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1301 f1a77571d29adfb864059521224d5274 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 1.6E-87 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_1301 f1a77571d29adfb864059521224d5274 543 PANTHER PTHR30290 9 542 1.5E-210 T 21-04-2016 SDY_1301 f1a77571d29adfb864059521224d5274 543 SUPERFAMILY SSF53850 35 525 1.09E-145 T 21-04-2016 SDY_1301 f1a77571d29adfb864059521224d5274 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_1301 f1a77571d29adfb864059521224d5274 543 PANTHER PTHR30290:SF10 9 542 1.5E-210 T 21-04-2016 SDY_1301 f1a77571d29adfb864059521224d5274 543 PIRSF PIRSF002741 1 543 2.0E-110 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_1301 f1a77571d29adfb864059521224d5274 543 Gene3D G3DSA:3.10.105.10 310 511 6.2E-61 T 21-04-2016 SDY_1301 f1a77571d29adfb864059521224d5274 543 Gene3D G3DSA:3.40.190.10 160 309 4.7E-56 T 21-04-2016 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 PANTHER PTHR23293:SF5 5 244 3.1E-98 T 21-04-2016 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 1.1E-103 T 21-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 Gene3D G3DSA:3.40.50.620 9 216 1.4E-63 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 SUPERFAMILY SSF52402 21 208 1.94E-52 T 21-04-2016 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.3E-95 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 PANTHER PTHR23293 5 244 3.1E-98 T 21-04-2016 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 PIRSF PIRSF000857 6 244 3.6E-53 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.5E-51 T 21-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SDY_2964 7d1265cd8fd926bf305154073cfc8b7b 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.938 T 21-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 SUPERFAMILY SSF53633 2 255 5.89E-62 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.9E-78 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.844 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 PANTHER PTHR23342 1 256 4.4E-99 T 21-04-2016 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 PIRSF PIRSF000728 1 257 3.2E-74 T 21-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 Gene3D G3DSA:3.40.1160.10 2 255 1.3E-79 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3794 6b881d1668a57ac2aeef1cd76633f3e2 257 Pfam PF00696 Amino acid kinase family 4 234 4.2E-39 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 1.8E-92 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 PANTHER PTHR11496 1 387 2.7E-246 T 21-04-2016 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 Gene3D G3DSA:3.40.50.1970 1 184 3.1E-55 T 21-04-2016 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 Gene3D G3DSA:1.20.1090.10 185 386 1.8E-56 T 21-04-2016 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 PANTHER PTHR11496:SF65 1 387 2.7E-246 T 21-04-2016 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 SUPERFAMILY SSF56796 1 385 2.49E-108 T 21-04-2016 SDY_3063 164edc2eacb50ea5359b0f16e60dbd21 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 187 1.2E-68 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 SUPERFAMILY SSF53448 7 187 2.7E-35 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.958 T 21-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 PANTHER PTHR19136:SF81 2 194 1.4E-56 T 21-04-2016 SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 PANTHER PTHR19136 2 194 1.4E-56 T 21-04-2016 SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 Gene3D G3DSA:3.90.550.10 4 192 1.1E-59 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3888 1941a368830f3e539bf0d38a8d7354c5 194 Pfam PF12804 MobA-like NTP transferase domain 9 160 3.4E-34 T 21-04-2016 IPR025877 MobA-like NTP transferase SDY_4046 fdd28be1438d6b050bcd8d14c6f7a249 427 SUPERFAMILY SSF51261 226 425 2.98E-47 T 21-04-2016 IPR011055 Duplicated hybrid motif SDY_4046 fdd28be1438d6b050bcd8d14c6f7a249 427 PANTHER PTHR21666 19 427 1.0E-203 T 21-04-2016 SDY_4046 fdd28be1438d6b050bcd8d14c6f7a249 427 Pfam PF01551 Peptidase family M23 328 421 5.3E-26 T 21-04-2016 IPR016047 Peptidase M23 SDY_4046 fdd28be1438d6b050bcd8d14c6f7a249 427 Gene3D G3DSA:2.70.70.10 288 426 6.4E-36 T 21-04-2016 SDY_4046 fdd28be1438d6b050bcd8d14c6f7a249 427 PANTHER PTHR21666:SF213 19 427 1.0E-203 T 21-04-2016 SDY_1443 c228d30339b379f2398d7d7d8d68bd6b 68 Pfam PF13064 Protein of unknown function (DUF3927) 18 62 6.4E-30 T 21-04-2016 IPR025169 Protein of unknown function DUF3927 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 SUPERFAMILY SSF53633 7 240 2.23E-71 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 Gene3D G3DSA:3.40.1160.10 3 240 1.5E-84 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 PANTHER PTHR21499:SF23 4 241 4.8E-108 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.274 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 PIRSF PIRSF005650 4 241 1.4E-88 T 21-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 PANTHER PTHR21499 4 241 4.8E-108 T 21-04-2016 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 Pfam PF00696 Amino acid kinase family 10 219 1.6E-27 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_0187 bef1f31c6e4e3c189df0b999e5953ea8 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.0E-103 T 21-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SDY_4563 5b602b30300b7da7132694141166e131 334 SUPERFAMILY SSF52540 13 261 3.19E-73 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4563 5b602b30300b7da7132694141166e131 334 SMART SM00382 47 239 3.7E-13 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4563 5b602b30300b7da7132694141166e131 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.6E-19 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_4563 5b602b30300b7da7132694141166e131 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 2.9E-25 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_4563 5b602b30300b7da7132694141166e131 334 Gene3D G3DSA:3.40.50.300 11 263 1.6E-81 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4563 5b602b30300b7da7132694141166e131 334 PANTHER PTHR24220 14 330 9.9E-218 T 21-04-2016 SDY_4563 5b602b30300b7da7132694141166e131 334 Pfam PF00005 ABC transporter 38 189 1.1E-32 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4563 5b602b30300b7da7132694141166e131 334 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4563 5b602b30300b7da7132694141166e131 334 PANTHER PTHR24220:SF493 14 330 9.9E-218 T 21-04-2016 SDY_3122 2b68a56e970a5df33f6770665e758a03 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 SDY_3122 2b68a56e970a5df33f6770665e758a03 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 1.1E-29 T 21-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SDY_3122 2b68a56e970a5df33f6770665e758a03 234 SUPERFAMILY SSF51419 1 227 1.57E-79 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3122 2b68a56e970a5df33f6770665e758a03 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 8.7E-105 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 SDY_3122 2b68a56e970a5df33f6770665e758a03 234 Gene3D G3DSA:3.20.20.10 1 233 3.5E-93 T 21-04-2016 IPR029066 PLP-binding barrel SDY_3122 2b68a56e970a5df33f6770665e758a03 234 PANTHER PTHR10146 1 234 2.5E-106 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 SDY_3122 2b68a56e970a5df33f6770665e758a03 234 PIRSF PIRSF004848 1 234 1.3E-74 T 21-04-2016 IPR011078 Uncharacterised protein family UPF0001 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 Gene3D G3DSA:1.10.230.10 281 373 3.7E-43 T 21-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 21-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 1.6E-243 T 21-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.2E-131 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PIRSF PIRSF001369 38 427 3.3E-176 T 21-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 PANTHER PTHR11739 39 423 3.2E-203 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 SUPERFAMILY SSF48256 9 422 1.83E-166 T 21-04-2016 IPR002020 Citrate synthase GO:0046912 SDY_0658 acdc4912e701cef93dbb3d1d3aad7b9d 427 Gene3D G3DSA:1.10.580.10 52 280 1.8E-94 T 21-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 Pfam PF08402 TOBE domain 295 375 3.1E-19 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 SUPERFAMILY SSF52540 19 257 3.9E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 Gene3D G3DSA:3.40.50.300 11 254 1.9E-84 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 Pfam PF00005 ABC transporter 36 177 8.7E-37 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 7.2E-155 T 21-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 SUPERFAMILY SSF50331 252 375 6.46E-17 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 SMART SM00382 44 227 3.6E-18 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 PANTHER PTHR24220 21 342 2.6E-203 T 21-04-2016 SDY_0740 601270e7e5bab01f3d3e260cc1744a8b 377 PANTHER PTHR24220:SF481 21 342 2.6E-203 T 21-04-2016 SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 PIRSF PIRSF006181 1 159 3.5E-60 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 3.3E-23 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 PANTHER PTHR30411:SF0 1 158 2.1E-76 T 21-04-2016 SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 PANTHER PTHR30411 1 158 2.1E-76 T 21-04-2016 SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 Gene3D G3DSA:3.90.960.10 1 157 5.9E-62 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.9E-58 T 21-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SDY_0437 cfa1988bbc52fc242bef0a621a1a8cea 159 SUPERFAMILY SSF55826 2 155 1.57E-45 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Pfam PF00128 Alpha amylase, catalytic domain 273 344 2.9E-8 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Gene3D G3DSA:2.60.40.1180 624 725 4.5E-37 T 21-04-2016 IPR013780 Glycosyl hydrolase, all-beta SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 SUPERFAMILY SSF51445 228 621 2.48E-110 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Gene3D G3DSA:2.60.40.10 14 104 1.4E-20 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Gene3D G3DSA:2.60.40.10 113 220 1.3E-41 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 SUPERFAMILY SSF81296 117 223 2.62E-35 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 PANTHER PTHR10357 49 725 0.0 T 21-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Gene3D G3DSA:3.20.20.80 242 610 2.9E-90 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 7.6E-26 T 21-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 SUPERFAMILY SSF51011 623 726 3.51E-35 T 21-04-2016 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 7.8E-24 T 21-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.729 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 SMART SM00642 247 596 2.3E-6 T 21-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 PANTHER PTHR10357:SF158 49 725 0.0 T 21-04-2016 SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 SUPERFAMILY SSF81296 16 115 1.22E-18 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_3578 91728cecfa3b6be892f1aacc526eba2e 728 PIRSF PIRSF000463 6 728 2.3E-284 T 21-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_4776 a90a415c62c7167ce90aa4988b50701e 90 PANTHER PTHR33293 1 89 5.7E-20 T 21-04-2016 SDY_4776 a90a415c62c7167ce90aa4988b50701e 90 PANTHER PTHR33293:SF2 1 89 5.7E-20 T 21-04-2016 SDY_4776 a90a415c62c7167ce90aa4988b50701e 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4776 a90a415c62c7167ce90aa4988b50701e 90 Pfam PF12759 InsA C-terminal domain 42 87 2.8E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4685 a90a415c62c7167ce90aa4988b50701e 90 PANTHER PTHR33293 1 89 5.7E-20 T 21-04-2016 SDY_4685 a90a415c62c7167ce90aa4988b50701e 90 PANTHER PTHR33293:SF2 1 89 5.7E-20 T 21-04-2016 SDY_4685 a90a415c62c7167ce90aa4988b50701e 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4685 a90a415c62c7167ce90aa4988b50701e 90 Pfam PF12759 InsA C-terminal domain 42 87 2.8E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1987 639e7d5dd433594f5edc4254d0387fe5 83 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 6 83 3.0E-41 T 21-04-2016 IPR009950 Protein of unknown function DUF1480 SDY_1987 639e7d5dd433594f5edc4254d0387fe5 83 Pfam PF07351 Protein of unknown function (DUF1480) 7 82 1.5E-37 T 21-04-2016 IPR009950 Protein of unknown function DUF1480 SDY_1225 18012317299c715dfb4ab718c6e7b21c 510 PANTHER PTHR30029:SF2 9 507 2.5E-248 T 21-04-2016 SDY_1225 18012317299c715dfb4ab718c6e7b21c 510 PANTHER PTHR30029 9 507 2.5E-248 T 21-04-2016 SDY_1225 18012317299c715dfb4ab718c6e7b21c 510 Pfam PF04293 SpoVR like protein 19 450 8.0E-177 T 21-04-2016 IPR007390 Sporulation stage V, protein R SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 ProSitePatterns PS00336 Beta-lactamase class-C active site. 76 83 - T 21-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 SUPERFAMILY SSF56601 22 376 1.82E-105 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 Gene3D G3DSA:3.40.710.10 22 376 1.5E-95 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 Pfam PF00144 Beta-lactamase 30 376 2.2E-86 T 21-04-2016 IPR001466 Beta-lactamase-related SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 PANTHER PTHR22935 17 377 5.8E-74 T 21-04-2016 SDY_4394 b7851c9b3cfe64b2f430c84fa7fd8c9d 377 PANTHER PTHR22935:SF64 17 377 5.8E-74 T 21-04-2016 SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 7.3E-23 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 PIRSF PIRSF015753 5 324 3.8E-134 T 21-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 SUPERFAMILY SSF47616 176 324 3.9E-36 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 Gene3D G3DSA:3.40.30.10 43 178 6.2E-19 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 SUPERFAMILY SSF52833 41 99 1.57E-14 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 SUPERFAMILY SSF52833 126 162 1.57E-14 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 PANTHER PTHR32419 1 325 1.9E-183 T 21-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 Gene3D G3DSA:1.20.1050.10 179 288 1.5E-27 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_3291 225b36e727c8fc0cefc59bfdf8f7912b 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 5.6E-13 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 SUPERFAMILY SSF57783 12 49 2.55E-13 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 PANTHER PTHR11390:SF26 10 177 2.4E-97 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 SUPERFAMILY SSF57783 60 99 1.65E-13 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 PANTHER PTHR11390 10 177 2.4E-97 T 21-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Gene3D G3DSA:3.30.65.10 102 136 3.6E-4 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Gene3D G3DSA:3.30.65.10 62 96 1.1E-14 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Gene3D G3DSA:3.30.65.10 14 49 4.4E-15 T 21-04-2016 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.9E-16 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 6.8E-18 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 6.9E-16 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_3460 0e2fcbf30e07e7a8c2c06a59da950a40 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 167 0.12 T 21-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SDY_3661 a5fbdca2b101471e75d4a099ecbc2837 438 PIRSF PIRSF002746 1 438 1.6E-158 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3661 a5fbdca2b101471e75d4a099ecbc2837 438 PANTHER PTHR30354:SF4 1 438 0.0 T 21-04-2016 SDY_3661 a5fbdca2b101471e75d4a099ecbc2837 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.1E-202 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3661 a5fbdca2b101471e75d4a099ecbc2837 438 Pfam PF02447 GntP family permease 1 437 6.2E-187 T 21-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SDY_3661 a5fbdca2b101471e75d4a099ecbc2837 438 PANTHER PTHR30354 1 438 0.0 T 21-04-2016 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 72.982 T 21-04-2016 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 PANTHER PTHR21535 3 327 9.2E-50 T 21-04-2016 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 251 327 2.3E-18 T 21-04-2016 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF143865 8 255 1.22E-48 T 21-04-2016 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 147 244 2.7E-15 T 21-04-2016 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 8.4E-65 T 21-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SDY_1424 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF144083 263 324 4.71E-13 T 21-04-2016 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 PANTHER PTHR38685 2 332 1.0E-68 T 21-04-2016 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 SMART SM00771 195 324 5.6E-75 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 197 332 7.0E-76 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 PANTHER PTHR38685:SF1 2 332 1.0E-68 T 21-04-2016 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 Gene3D G3DSA:3.30.1400.10 194 329 4.2E-62 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 324 1.1E-125 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 326 27.467 T 21-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 SUPERFAMILY SSF64383 196 329 3.92E-48 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SDY_2609 6f458b1a7e7d0b5c5f1107d834dde95c 332 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 198 321 2.7E-47 T 21-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 SDY_2839 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 7.4E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_2839 2a6a6373dde49223b9658e7d31c5a7aa 448 SUPERFAMILY SSF53098 117 419 2.05E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2839 2a6a6373dde49223b9658e7d31c5a7aa 448 PANTHER PTHR37529 4 446 2.6E-84 T 21-04-2016 SDY_2839 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF01609 Transposase DDE domain 134 358 8.1E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_0793 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 7.4E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_0793 2a6a6373dde49223b9658e7d31c5a7aa 448 SUPERFAMILY SSF53098 117 419 2.05E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0793 2a6a6373dde49223b9658e7d31c5a7aa 448 PANTHER PTHR37529 4 446 2.6E-84 T 21-04-2016 SDY_0793 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF01609 Transposase DDE domain 134 358 8.1E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_4335 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 7.4E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_4335 2a6a6373dde49223b9658e7d31c5a7aa 448 SUPERFAMILY SSF53098 117 419 2.05E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4335 2a6a6373dde49223b9658e7d31c5a7aa 448 PANTHER PTHR37529 4 446 2.6E-84 T 21-04-2016 SDY_4335 2a6a6373dde49223b9658e7d31c5a7aa 448 Pfam PF01609 Transposase DDE domain 134 358 8.1E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 2.4E-8 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SDY_3820 a0d8e898ee1a47a064476be82f440163 248 PANTHER PTHR19370 4 227 2.0E-123 T 21-04-2016 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 Gene3D G3DSA:3.40.50.80 97 248 9.8E-48 T 21-04-2016 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 Gene3D G3DSA:2.40.30.10 2 96 3.8E-33 T 21-04-2016 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 9.7E-20 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 SUPERFAMILY SSF52343 103 248 2.49E-38 T 21-04-2016 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 PANTHER PTHR19370:SF98 4 227 2.0E-123 T 21-04-2016 SDY_3820 a0d8e898ee1a47a064476be82f440163 248 SUPERFAMILY SSF63380 3 100 5.91E-26 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_0618 e8d1be796af59c0415245e867fa096a8 120 Gene3D G3DSA:2.40.160.10 38 117 1.7E-6 T 21-04-2016 IPR023614 Porin domain SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 161 3.6E-17 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 SUPERFAMILY SSF47144 77 170 2.88E-25 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 Gene3D G3DSA:1.20.1280.20 81 170 3.4E-31 T 21-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.7E-67 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 SUPERFAMILY SSF46565 1 75 9.03E-18 T 21-04-2016 IPR001623 DnaJ domain SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 SMART SM00271 1 66 7.9E-9 T 21-04-2016 IPR001623 DnaJ domain SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 PANTHER PTHR14021 1 166 1.3E-62 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 Gene3D G3DSA:1.10.287.110 1 78 3.8E-27 T 21-04-2016 IPR001623 DnaJ domain SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 PANTHER PTHR14021:SF15 1 166 1.3E-62 T 21-04-2016 SDY_2723 ff1e23c9fe4cd54f977880ca317d3005 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.825 T 21-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PANTHER PTHR23115:SF151 1 392 0.0 T 21-04-2016 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 21-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 21-04-2016 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 21-04-2016 IPR031157 Tr-type G domain, conserved site SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 21-04-2016 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.6E-240 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 21-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 21-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 21-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Gene3D G3DSA:3.40.50.300 3 208 5.0E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 21-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 21-04-2016 IPR009000 Translation protein, beta-barrel domain SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.249 T 21-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 21-04-2016 SDY_3748 3ba5ec971eda5dc5f5c1c093a5df4e11 394 PANTHER PTHR23115 1 392 0.0 T 21-04-2016 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 4.1E-50 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.354 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 PANTHER PTHR11910 4 176 3.9E-58 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 21-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.0E-67 T 21-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 Gene3D G3DSA:1.10.520.20 3 104 3.9E-35 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SDY_4013 708852f0999ff4e8b04e6dbbd43abceb 177 SUPERFAMILY SSF47928 3 102 1.28E-27 T 21-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.936 T 21-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 PANTHER PTHR18964 1 303 2.0E-173 T 21-04-2016 SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 Gene3D G3DSA:3.30.420.40 133 278 1.6E-49 T 21-04-2016 SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 21-04-2016 IPR000600 ROK family SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 Pfam PF00480 ROK family 2 300 4.5E-70 T 21-04-2016 IPR000600 ROK family SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 PANTHER PTHR18964:SF134 1 303 2.0E-173 T 21-04-2016 SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 Gene3D G3DSA:3.30.420.40 1 132 1.2E-42 T 21-04-2016 SDY_2031 991cf2dec74cee8f23fdedc941c4dbb2 303 SUPERFAMILY SSF53067 1 300 3.58E-62 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.4E-185 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PIRSF PIRSF016599 1 485 1.4E-214 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014 330 485 1.5E-208 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014:SF54 330 485 1.5E-208 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 SUPERFAMILY SSF53187 10 182 3.01E-66 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 SUPERFAMILY SSF53187 397 482 3.01E-66 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 6.7E-103 T 21-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014 204 279 1.5E-208 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014 1 185 1.5E-208 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 5.7E-21 T 21-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 Gene3D G3DSA:3.40.630.10 397 483 3.8E-111 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 Gene3D G3DSA:3.40.630.10 3 181 3.8E-111 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 Pfam PF07687 Peptidase dimerisation domain 209 293 5.3E-8 T 21-04-2016 IPR011650 Peptidase M20, dimerisation domain SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014:SF54 204 279 1.5E-208 T 21-04-2016 SDY_0480 a07a69b65a7d2eea7793c55ca154af9d 485 PANTHER PTHR11014:SF54 1 185 1.5E-208 T 21-04-2016 SDY_3617 523221cc867ee2bd766bb3390d7edbb2 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 2.4E-27 T 21-04-2016 IPR009525 Protein of unknown function DUF1145 SDY_3617 523221cc867ee2bd766bb3390d7edbb2 89 PANTHER PTHR38775:SF1 1 89 1.7E-30 T 21-04-2016 SDY_3617 523221cc867ee2bd766bb3390d7edbb2 89 PANTHER PTHR38775 1 89 1.7E-30 T 21-04-2016 SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 SMART SM00382 26 203 2.4E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 Gene3D G3DSA:3.40.50.300 1 189 4.9E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 Pfam PF00005 ABC transporter 19 154 2.4E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 198 1.0E-85 T 21-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 PANTHER PTHR24220 3 205 1.7E-108 T 21-04-2016 SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 SUPERFAMILY SSF52540 2 187 9.88E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0877 01f84e868b7d65e4c481c6a0a81ff078 205 PANTHER PTHR24220:SF508 3 205 1.7E-108 T 21-04-2016 SDY_3373 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:3.10.450.50 114 172 4.8E-18 T 21-04-2016 IPR032710 NTF2-like domain SDY_3373 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:3.10.450.50 26 70 4.8E-18 T 21-04-2016 IPR032710 NTF2-like domain SDY_3373 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:1.10.10.640 173 203 1.2E-21 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SDY_3373 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:1.10.10.640 71 111 1.2E-21 T 21-04-2016 IPR023094 Toluene tolerance protein, alpha-helical SDY_3373 6aabd3668686f925d297c6ca23963729 211 PANTHER PTHR36573 1 211 3.9E-82 T 21-04-2016 SDY_3373 6aabd3668686f925d297c6ca23963729 211 PIRSF PIRSF004649 1 211 5.4E-64 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SDY_3373 6aabd3668686f925d297c6ca23963729 211 Pfam PF05494 MlaC protein 33 198 8.0E-54 T 21-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SDY_2821 e4c50a7a39b36a2ebdbe923d645ec69a 129 PANTHER PTHR30086 13 129 3.3E-18 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_2821 e4c50a7a39b36a2ebdbe923d645ec69a 129 PANTHER PTHR30086:SF12 13 129 3.3E-18 T 21-04-2016 SDY_0233 baa389b877a7f741a38376cf573ddbda 155 Gene3D G3DSA:3.30.420.10 3 148 1.9E-62 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0233 baa389b877a7f741a38376cf573ddbda 155 SUPERFAMILY SSF53098 4 147 6.45E-59 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0233 baa389b877a7f741a38376cf573ddbda 155 PANTHER PTHR10642 4 152 1.8E-64 T 21-04-2016 SDY_0233 baa389b877a7f741a38376cf573ddbda 155 Pfam PF00075 RNase H 3 141 5.4E-55 T 21-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SDY_0233 baa389b877a7f741a38376cf573ddbda 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 40.404 T 21-04-2016 IPR022892 Ribonuclease H GO:0004523 SDY_3434 4fa013f9d467961f330c6c5324b3e4ac 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 2.0E-27 T 21-04-2016 IPR010398 Protein of unknown function DUF997 SDY_3434 4fa013f9d467961f330c6c5324b3e4ac 80 PANTHER PTHR39174:SF1 1 80 3.6E-40 T 21-04-2016 SDY_3434 4fa013f9d467961f330c6c5324b3e4ac 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.4E-31 T 21-04-2016 IPR010398 Protein of unknown function DUF997 SDY_3434 4fa013f9d467961f330c6c5324b3e4ac 80 PANTHER PTHR39174 1 80 3.6E-40 T 21-04-2016 SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 Pfam PF00270 DEAD/DEAH box helicase 28 197 6.7E-47 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 Gene3D G3DSA:3.40.50.300 215 374 2.5E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 50.245 T 21-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 21-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 SMART SM00490 262 343 3.4E-30 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 Pfam PF00271 Helicase conserved C-terminal domain 236 343 1.5E-27 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 PANTHER PTHR24031:SF334 3 432 5.6E-235 T 21-04-2016 SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 PANTHER PTHR24031 3 432 5.6E-235 T 21-04-2016 SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 Gene3D G3DSA:3.40.50.300 3 214 6.5E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 SUPERFAMILY SSF52540 76 358 1.31E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2817 64c88ea7a668af7f103b2de25f28b6a8 444 SMART SM00487 23 223 6.8E-60 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_4451 0dd23d825ec7b9a59cc07929dcfbd6ea 99 Pfam PF15922 YjeJ-like 1 93 1.1E-46 T 21-04-2016 IPR031810 YjeJ-like SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 21-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 Gene3D G3DSA:3.20.20.70 14 241 7.5E-89 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 PANTHER PTHR32119:SF2 2 242 5.7E-126 T 21-04-2016 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 8.3E-56 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 7.5E-55 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 40.059 T 21-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 SUPERFAMILY SSF51366 14 240 2.77E-79 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 PANTHER PTHR32119 2 242 5.7E-126 T 21-04-2016 SDY_1357 ae6970c1e6d69fd0d2f6e303ba03fd1a 245 SMART SM00934 16 237 3.2E-99 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_0400 f5716a3db7b446fba4b40a0c876079df 135 SUPERFAMILY SSF46689 28 123 7.88E-8 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0400 f5716a3db7b446fba4b40a0c876079df 135 Pfam PF13551 Winged helix-turn helix 23 86 4.9E-19 T 21-04-2016 SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 PANTHER PTHR23513:SF8 1 397 1.1E-211 T 21-04-2016 SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 SUPERFAMILY SSF103473 16 396 2.09E-20 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 PANTHER PTHR23513 1 397 1.1E-211 T 21-04-2016 SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 Gene3D G3DSA:1.20.1250.20 18 185 6.3E-10 T 21-04-2016 SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.344 T 21-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 SDY_3052 b6cf54064da25191ecdc7480719bf7e2 397 Pfam PF07690 Major Facilitator Superfamily 20 354 1.5E-12 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 128 200 1.7E-52 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 20 87 1.7E-52 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.30.30 88 127 5.5E-10 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 20 196 2.2E-49 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.8E-272 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 314 356 9.8E-32 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 201 238 9.8E-32 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PANTHER PTHR19375 19 606 0.0 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Pfam PF00012 Hsp70 protein 22 600 8.7E-205 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:1.20.1270.10 529 615 1.4E-33 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PANTHER PTHR19375:SF176 19 606 0.0 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.738 T 21-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:2.60.34.10 387 528 6.2E-55 T 21-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100934 504 615 3.92E-37 T 21-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.90.640.10 239 310 1.0E-10 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 200 377 2.8E-53 T 21-04-2016 SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2722 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2052 14a046f64260012ee400933c501ee8b5 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 21-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SDY_2052 14a046f64260012ee400933c501ee8b5 213 Pfam PF02223 Thymidylate kinase 8 200 5.9E-61 T 21-04-2016 SDY_2052 14a046f64260012ee400933c501ee8b5 213 PANTHER PTHR10344 1 212 1.1E-75 T 21-04-2016 SDY_2052 14a046f64260012ee400933c501ee8b5 213 SUPERFAMILY SSF52540 1 209 9.53E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2052 14a046f64260012ee400933c501ee8b5 213 Gene3D G3DSA:3.40.50.300 2 209 7.0E-67 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2052 14a046f64260012ee400933c501ee8b5 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.385 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SDY_2052 14a046f64260012ee400933c501ee8b5 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 2.5E-70 T 21-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 55.977 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 Pfam PF13667 ThiC-associated domain 27 108 8.5E-33 T 21-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 Pfam PF01964 Radical SAM ThiC family 148 596 1.9E-199 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557:SF1 4 106 0.0 T 21-04-2016 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557:SF1 198 627 0.0 T 21-04-2016 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557:SF1 140 170 0.0 T 21-04-2016 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 8.8E-225 T 21-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557 4 106 0.0 T 21-04-2016 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557 198 627 0.0 T 21-04-2016 SDY_3732 68bbff28fd5b1da033df55549f441ef1 631 PANTHER PTHR30557 140 170 0.0 T 21-04-2016 SDY_1534 a224c63987547ef3cf9317ad25cbde79 161 PIRSF PIRSF034445 1 152 9.9E-31 T 21-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SDY_1534 a224c63987547ef3cf9317ad25cbde79 161 PANTHER PTHR38102:SF1 1 160 7.8E-72 T 21-04-2016 SDY_1534 a224c63987547ef3cf9317ad25cbde79 161 Pfam PF07813 LTXXQ motif family protein 46 141 1.0E-23 T 21-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SDY_1534 a224c63987547ef3cf9317ad25cbde79 161 PANTHER PTHR38102 1 160 7.8E-72 T 21-04-2016 SDY_3202 908fccf6c4726c13f69177899ff214cd 386 SUPERFAMILY SSF56059 1 168 2.56E-95 T 21-04-2016 SDY_3202 908fccf6c4726c13f69177899ff214cd 386 SUPERFAMILY SSF56059 266 383 2.56E-95 T 21-04-2016 SDY_3202 908fccf6c4726c13f69177899ff214cd 386 PANTHER PTHR30094:SF0 6 386 1.2E-166 T 21-04-2016 SDY_3202 908fccf6c4726c13f69177899ff214cd 386 PANTHER PTHR30094 6 386 1.2E-166 T 21-04-2016 SDY_3202 908fccf6c4726c13f69177899ff214cd 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 2.2E-162 T 21-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SDY_3202 908fccf6c4726c13f69177899ff214cd 386 SUPERFAMILY SSF52440 174 279 3.16E-39 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.8E-48 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 PANTHER PTHR30435 2 138 1.6E-53 T 21-04-2016 SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 PANTHER PTHR30435:SF12 2 138 1.6E-53 T 21-04-2016 SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 PIRSF PIRSF002889 1 137 5.9E-43 T 21-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SDY_2078 c3e82b8d3cf9c601da977f9705e077f8 138 Pfam PF00460 Flagella basal body rod protein 9 39 2.2E-12 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 PANTHER PTHR30050:SF9 1 240 4.0E-202 T 21-04-2016 SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 PIRSF PIRSF003073 1 245 1.7E-35 T 21-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 SMART SM00382 98 227 2.4E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 SUPERFAMILY SSF52540 64 226 9.51E-22 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 Gene3D G3DSA:3.40.50.300 51 222 1.1E-33 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 Pfam PF01695 IstB-like ATP binding protein 93 218 2.4E-17 T 21-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SDY_4615 061c40f46c2e16e1bb03b4082bfa464e 245 PANTHER PTHR30050 1 240 4.0E-202 T 21-04-2016 SDY_0277 ec24f2a1f2db94406484922329881f67 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 21-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 SUPERFAMILY SSF50891 1 162 4.09E-60 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0277 ec24f2a1f2db94406484922329881f67 164 PIRSF PIRSF001467 1 164 5.1E-29 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 PANTHER PTHR11071:SF192 1 164 2.1E-84 T 21-04-2016 SDY_0277 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 Gene3D G3DSA:2.40.100.10 2 162 4.7E-56 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0277 ec24f2a1f2db94406484922329881f67 164 PANTHER PTHR11071 1 164 2.1E-84 T 21-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SDY_0277 ec24f2a1f2db94406484922329881f67 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 2.0E-48 T 21-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SDY_3622 f1ecd6891c8d4086ac7a4071aa856c63 221 PANTHER PTHR34300 1 221 4.4E-138 T 21-04-2016 SDY_3622 f1ecd6891c8d4086ac7a4071aa856c63 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 5.3E-69 T 21-04-2016 IPR003744 Protein of unknown function DUF165 SDY_3622 f1ecd6891c8d4086ac7a4071aa856c63 221 PANTHER PTHR34300:SF1 1 221 4.4E-138 T 21-04-2016 SDY_3622 f1ecd6891c8d4086ac7a4071aa856c63 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.2E-37 T 21-04-2016 IPR003744 Protein of unknown function DUF165 SDY_2398 4e1ea415e5f1dbf1d030f5ed279d876b 91 PANTHER PTHR33293 2 91 7.7E-33 T 21-04-2016 SDY_2398 4e1ea415e5f1dbf1d030f5ed279d876b 91 Pfam PF12759 InsA C-terminal domain 43 88 2.2E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2398 4e1ea415e5f1dbf1d030f5ed279d876b 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 SUPERFAMILY SSF103025 3 277 1.04E-89 T 21-04-2016 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 PANTHER PTHR13847:SF5 5 357 6.1E-60 T 21-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Gene3D G3DSA:3.30.70.1400 54 137 8.3E-32 T 21-04-2016 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.611 T 21-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.2E-18 T 21-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.0E-82 T 21-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 1.0E-169 T 21-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 PIRSF PIRSF006487 1 363 4.7E-79 T 21-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 PANTHER PTHR13847 5 357 6.1E-60 T 21-04-2016 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 SUPERFAMILY SSF101790 271 361 4.09E-26 T 21-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Gene3D G3DSA:3.30.1360.120 3 53 2.6E-52 T 21-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Gene3D G3DSA:3.30.1360.120 144 231 2.6E-52 T 21-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SDY_3176 9a56555239defb95fd9228e49dfc51fa 364 Gene3D G3DSA:2.40.30.110 278 361 1.8E-29 T 21-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 PANTHER PTHR30191 1 127 1.0E-103 T 21-04-2016 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.408 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 4.2E-71 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 Gene3D G3DSA:3.20.70.20 44 126 2.3E-34 T 21-04-2016 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 SUPERFAMILY SSF51998 64 126 3.25E-24 T 21-04-2016 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 PIRSF PIRSF000378 2 127 2.1E-56 T 21-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 PANTHER PTHR30191:SF5 1 127 1.0E-103 T 21-04-2016 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 Pfam PF01228 Glycine radical 16 108 1.1E-22 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SDY_2822 bbbc06bb2885d00790c5c14a6ab3a0d2 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_0117 59533713803097a5a1b087cae1d2da22 360 PANTHER PTHR22926:SF5 2 360 5.8E-195 T 21-04-2016 SDY_0117 59533713803097a5a1b087cae1d2da22 360 PANTHER PTHR22926 2 360 5.8E-195 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.1E-33 T 21-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 21-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 8.9E-163 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0117 59533713803097a5a1b087cae1d2da22 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.853 T 21-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 Gene3D G3DSA:3.40.50.2300 29 146 3.5E-39 T 21-04-2016 SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 Pfam PF13407 Periplasmic binding protein domain 30 285 4.2E-56 T 21-04-2016 IPR025997 Periplasmic binding protein SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 PANTHER PTHR32196 22 304 2.3E-146 T 21-04-2016 SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 Gene3D G3DSA:3.40.50.2300 147 307 3.6E-48 T 21-04-2016 SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 PANTHER PTHR32196:SF41 22 304 2.3E-146 T 21-04-2016 SDY_4130 966fdc983fbfc6c3b71ee6a1fe1ae124 313 SUPERFAMILY SSF53822 9 307 1.68E-80 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3099 930501689baf330bf4c253c4658066a4 189 PANTHER PTHR39583 1 183 1.6E-27 T 21-04-2016 SDY_3099 930501689baf330bf4c253c4658066a4 189 Pfam PF11612 Type II secretion system (T2SS), protein J 46 181 1.0E-34 T 21-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SDY_3099 930501689baf330bf4c253c4658066a4 189 Gene3D G3DSA:3.10.610.10 26 136 1.8E-43 T 21-04-2016 SDY_3099 930501689baf330bf4c253c4658066a4 189 Gene3D G3DSA:2.10.70.20 139 186 4.0E-22 T 21-04-2016 SDY_3099 930501689baf330bf4c253c4658066a4 189 PANTHER PTHR39583:SF1 1 183 1.6E-27 T 21-04-2016 SDY_3099 930501689baf330bf4c253c4658066a4 189 SUPERFAMILY SSF54523 34 185 2.67E-44 T 21-04-2016 SDY_3099 930501689baf330bf4c253c4658066a4 189 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 1 183 3.4E-47 T 21-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 4.3E-92 T 21-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 1.9E-146 T 21-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PANTHER PTHR32195:SF17 1 399 3.6E-219 T 21-04-2016 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 PANTHER PTHR32195 1 399 3.6E-219 T 21-04-2016 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 7.0E-142 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SDY_1111 1ce884fa80609a77a2757e4ae8d5dc23 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 21-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site SDY_2577 1933903a87186825c361d2b232d16127 412 Pfam PF00155 Aminotransferase class I and II 37 376 1.6E-59 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_2577 1933903a87186825c361d2b232d16127 412 SUPERFAMILY SSF53383 10 394 3.94E-106 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2577 1933903a87186825c361d2b232d16127 412 PANTHER PTHR11751:SF302 18 398 1.7E-270 T 21-04-2016 SDY_2577 1933903a87186825c361d2b232d16127 412 PANTHER PTHR11751 18 398 1.7E-270 T 21-04-2016 SDY_2577 1933903a87186825c361d2b232d16127 412 Gene3D G3DSA:3.90.1150.10 264 395 1.2E-43 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2577 1933903a87186825c361d2b232d16127 412 Gene3D G3DSA:3.40.640.10 50 263 6.3E-62 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3374 23c573931555a3b6657c25e5e4ce19cb 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.0E-55 T 21-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 SDY_3374 23c573931555a3b6657c25e5e4ce19cb 183 Pfam PF02470 MlaD protein 39 116 1.3E-21 T 21-04-2016 IPR003399 Mce/MlaD SDY_3374 23c573931555a3b6657c25e5e4ce19cb 183 PANTHER PTHR33371 1 165 1.3E-51 T 21-04-2016 SDY_4632 2135b8447859fa6171dde634cb560707 148 PANTHER PTHR23091 3 148 8.8E-40 T 21-04-2016 SDY_4632 2135b8447859fa6171dde634cb560707 148 PANTHER PTHR23091:SF247 3 148 8.8E-40 T 21-04-2016 SDY_4632 2135b8447859fa6171dde634cb560707 148 SUPERFAMILY SSF55729 3 146 4.32E-34 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4632 2135b8447859fa6171dde634cb560707 148 Pfam PF00583 Acetyltransferase (GNAT) family 47 120 7.0E-19 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_4632 2135b8447859fa6171dde634cb560707 148 Gene3D G3DSA:3.40.630.30 3 147 1.3E-36 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4632 2135b8447859fa6171dde634cb560707 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 5.8E-48 T 21-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SDY_2349 0d8656b7b7c250e02d9d61a28ad86a6d 254 PANTHER PTHR22726 1 254 1.3E-189 T 21-04-2016 SDY_2349 0d8656b7b7c250e02d9d61a28ad86a6d 254 PANTHER PTHR22726:SF8 1 254 1.3E-189 T 21-04-2016 SDY_2349 0d8656b7b7c250e02d9d61a28ad86a6d 254 Gene3D G3DSA:3.30.2010.10 70 148 1.5E-21 T 21-04-2016 SDY_2349 0d8656b7b7c250e02d9d61a28ad86a6d 254 Pfam PF01435 Peptidase family M48 77 249 7.9E-27 T 21-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 Pfam PF01761 3-dehydroquinate synthase 67 325 2.0E-109 T 21-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 PANTHER PTHR21090 1 360 7.4E-213 T 21-04-2016 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 Gene3D G3DSA:1.20.1090.10 173 356 3.9E-68 T 21-04-2016 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 3.2E-123 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 SUPERFAMILY SSF56796 4 356 4.19E-118 T 21-04-2016 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 PIRSF PIRSF001455 10 360 9.4E-107 T 21-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 Gene3D G3DSA:3.40.50.1970 2 172 2.0E-67 T 21-04-2016 SDY_3690 b7daf45e740383ead9c279d7f139f8ff 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.467 T 21-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 412 440 2.7E-6 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 SUPERFAMILY SSF49899 331 476 6.25E-29 T 21-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 PANTHER PTHR30175 23 455 6.0E-129 T 21-04-2016 SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 SUPERFAMILY SSF75005 22 331 1.3E-109 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 29 42 - T 21-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 Gene3D G3DSA:2.115.10.20 35 327 2.4E-25 T 21-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 29 330 6.5E-102 T 21-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 PANTHER PTHR30175:SF0 23 455 6.0E-129 T 21-04-2016 SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 451 3.1E-144 T 21-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 Gene3D G3DSA:2.60.120.560 328 476 2.2E-31 T 21-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SDY_2558 bc1e027c360abb22a551ceac30a09eef 477 SMART SM00640 29 440 1.3E-150 T 21-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.7E-7 T 21-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.1E-76 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 1.1E-69 T 21-04-2016 IPR008090 Ferric iron reductase SDY_4625 0842e4cef04f25ed2b5d638d4ead79ac 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 6.2E-30 T 21-04-2016 IPR022770 Ferric iron reductase FhuF domain SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 Gene3D G3DSA:3.40.50.300 3 207 8.8E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 PANTHER PTHR24220 6 250 1.8E-168 T 21-04-2016 SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 Pfam PF00005 ABC transporter 20 149 4.8E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 PANTHER PTHR24220:SF466 6 250 1.8E-168 T 21-04-2016 SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 SUPERFAMILY SSF52540 4 215 4.9E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1145 ff5fee4e95ed5d23fa94be62e165502b 251 SMART SM00382 29 199 9.6E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0393 727c44149335d91025c459f2e23b0175 437 SMART SM00052 188 428 4.7E-111 T 21-04-2016 IPR001633 EAL domain SDY_0393 727c44149335d91025c459f2e23b0175 437 PANTHER PTHR33121 1 435 0.0 T 21-04-2016 SDY_0393 727c44149335d91025c459f2e23b0175 437 SUPERFAMILY SSF141868 194 435 1.15E-74 T 21-04-2016 IPR001633 EAL domain SDY_0393 727c44149335d91025c459f2e23b0175 437 PANTHER PTHR33121:SF4 1 435 0.0 T 21-04-2016 SDY_0393 727c44149335d91025c459f2e23b0175 437 Pfam PF12792 CSS motif domain associated with EAL 2 163 2.3E-30 T 21-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain SDY_0393 727c44149335d91025c459f2e23b0175 437 Pfam PF00563 EAL domain 195 422 9.1E-66 T 21-04-2016 IPR001633 EAL domain SDY_0393 727c44149335d91025c459f2e23b0175 437 Gene3D G3DSA:3.20.20.450 194 435 1.5E-80 T 21-04-2016 IPR001633 EAL domain SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 PANTHER PTHR13528 1 70 1.8E-34 T 21-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 SUPERFAMILY SSF143800 2 77 6.28E-30 T 21-04-2016 SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 21-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 21-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-25 T 21-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SDY_4067 79ee4cfd255906487645a5993f85b1d1 78 Gene3D G3DSA:2.30.170.40 2 77 7.8E-36 T 21-04-2016 SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 Pfam PF04321 RmlD substrate binding domain 1 293 5.1E-108 T 21-04-2016 IPR029903 RmlD-like substrate binding domain SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 PANTHER PTHR10491 1 295 9.0E-102 T 21-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 SUPERFAMILY SSF51735 1 294 2.63E-102 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 Gene3D G3DSA:3.90.25.10 221 283 2.7E-30 T 21-04-2016 SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 Gene3D G3DSA:3.90.25.10 172 184 2.7E-30 T 21-04-2016 SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 Gene3D G3DSA:3.40.50.720 1 171 2.9E-28 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 292 2.8E-97 T 21-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SDY_2205 b7a5eec6d1cce8cc18d1c25bd658fbb2 299 PANTHER PTHR10491:SF4 1 295 9.0E-102 T 21-04-2016 SDY_4098 fd46f3721d94f9d3b82a3de504675a73 445 Pfam PF13520 Amino acid permease 12 403 1.0E-49 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4098 fd46f3721d94f9d3b82a3de504675a73 445 PANTHER PTHR11785 7 445 8.1E-189 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4098 fd46f3721d94f9d3b82a3de504675a73 445 PANTHER PTHR11785:SF259 7 445 8.1E-189 T 21-04-2016 SDY_4098 fd46f3721d94f9d3b82a3de504675a73 445 PIRSF PIRSF006060 1 435 3.1E-62 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_3470 4363326f335edc2987d8e609b33aa633 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-51 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 PANTHER PTHR14413 1 118 6.7E-68 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 Gene3D G3DSA:3.90.1030.10 1 117 2.4E-51 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3470 4363326f335edc2987d8e609b33aa633 127 SUPERFAMILY SSF64263 1 118 3.4E-51 T 21-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 Gene3D G3DSA:3.40.190.10 169 257 9.2E-12 T 21-04-2016 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 SUPERFAMILY SSF53850 85 282 5.97E-37 T 21-04-2016 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 PANTHER PTHR30126 1 282 4.9E-132 T 21-04-2016 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 SUPERFAMILY SSF46785 1 109 3.65E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 Gene3D G3DSA:1.10.10.10 1 80 2.4E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 PANTHER PTHR30126:SF31 1 282 4.9E-132 T 21-04-2016 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 Gene3D G3DSA:3.40.190.10 89 168 8.2E-17 T 21-04-2016 SDY_1633 1e9a1e1d46925d389120d0aa752a834f 293 Pfam PF03466 LysR substrate binding domain 85 282 2.5E-44 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 21-04-2016 IPR001455 TusA-like domain SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 PANTHER PTHR33279 1 75 7.2E-47 T 21-04-2016 SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 Gene3D G3DSA:3.30.110.40 3 74 3.7E-22 T 21-04-2016 IPR001455 TusA-like domain SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 PANTHER PTHR33279:SF4 1 75 7.2E-47 T 21-04-2016 SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 Pfam PF01206 Sulfurtransferase TusA 4 74 5.4E-18 T 21-04-2016 IPR001455 TusA-like domain SDY_2230 0b3b4aa0e0817ef20eee683347b554f3 75 SUPERFAMILY SSF64307 3 74 2.09E-20 T 21-04-2016 IPR001455 TusA-like domain SDY_4457 cf4801e4dfe953bd9a20e933597262fd 577 Pfam PF07244 Surface antigen variable number repeat 189 252 2.6E-8 T 21-04-2016 IPR010827 Surface antigen variable number GO:0019867 SDY_4457 cf4801e4dfe953bd9a20e933597262fd 577 PANTHER PTHR12815 7 577 1.9E-293 T 21-04-2016 SDY_4457 cf4801e4dfe953bd9a20e933597262fd 577 PANTHER PTHR12815:SF12 7 577 1.9E-293 T 21-04-2016 SDY_4457 cf4801e4dfe953bd9a20e933597262fd 577 Pfam PF01103 Surface antigen 286 574 9.6E-31 T 21-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SDY_4457 cf4801e4dfe953bd9a20e933597262fd 577 Gene3D G3DSA:2.40.160.50 301 574 1.1E-21 T 21-04-2016 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 Gene3D G3DSA:1.20.1300.10 1 115 4.7E-40 T 21-04-2016 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 PANTHER PTHR38689:SF1 2 115 3.4E-61 T 21-04-2016 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.2E-37 T 21-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 2.0E-6 T 21-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 PIRSF PIRSF000169 1 115 3.9E-42 T 21-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 SUPERFAMILY SSF81343 5 115 1.96E-31 T 21-04-2016 SDY_0660 753b0fd70db6b7058990018f6ede9e17 115 PANTHER PTHR38689 2 115 3.4E-61 T 21-04-2016 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.4E-37 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 PANTHER PTHR33404 1 88 4.4E-36 T 21-04-2016 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.0E-25 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 Gene3D G3DSA:3.30.1070.10 31 85 6.0E-26 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.958 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SDY_1205 48e12cecac761e9a37f181be663a4bfe 88 SUPERFAMILY SSF55229 32 85 1.22E-18 T 21-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 326 534 3.9E-70 T 21-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 156 175 0.037 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 76 95 4.1 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 176 195 0.028 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 116 135 0.022 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 136 155 0.0026 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 96 115 7.4 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SMART SM00364 196 215 5.8 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Pfam PF12468 Type III secretion system leucine rich repeat protein 4 49 1.3E-11 T 21-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Gene3D G3DSA:1.20.1270.130 316 396 2.5E-34 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 SUPERFAMILY SSF52058 49 282 3.33E-23 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Gene3D G3DSA:1.20.58.90 531 603 3.9E-37 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Gene3D G3DSA:1.20.58.360 397 530 6.8E-58 T 21-04-2016 SDY_2753 c2b8340965722dc6e71b6604bf279261 608 Gene3D G3DSA:3.80.10.10 60 278 1.0E-32 T 21-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SDY_4522 1ac1847783e18b91d344403e31cea738 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 8.7E-175 T 21-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SDY_4522 1ac1847783e18b91d344403e31cea738 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 3.0E-37 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SDY_4522 1ac1847783e18b91d344403e31cea738 471 Gene3D G3DSA:1.10.860.10 27 129 5.8E-42 T 21-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SDY_4522 1ac1847783e18b91d344403e31cea738 471 PANTHER PTHR30153 11 471 8.7E-227 T 21-04-2016 SDY_4522 1ac1847783e18b91d344403e31cea738 471 SUPERFAMILY SSF52540 204 275 3.15E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4522 1ac1847783e18b91d344403e31cea738 471 SUPERFAMILY SSF52540 302 456 3.15E-52 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4522 1ac1847783e18b91d344403e31cea738 471 SMART SM00382 223 429 1.4E-4 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4522 1ac1847783e18b91d344403e31cea738 471 Gene3D G3DSA:3.40.50.300 192 464 3.3E-104 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4522 1ac1847783e18b91d344403e31cea738 471 SUPERFAMILY SSF48024 25 136 1.23E-39 T 21-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SDY_4522 1ac1847783e18b91d344403e31cea738 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 3.0E-113 T 21-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 PANTHER PTHR30363 1 257 1.3E-161 T 21-04-2016 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 SMART SM01134 72 233 1.7E-72 T 21-04-2016 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 3.5E-52 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 SMART SM00420 6 58 3.9E-23 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 PANTHER PTHR30363:SF15 1 257 1.3E-161 T 21-04-2016 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.1E-21 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 Gene3D G3DSA:3.40.50.1360 76 215 3.5E-17 T 21-04-2016 SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 Gene3D G3DSA:1.10.10.10 1 60 5.9E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 SUPERFAMILY SSF46785 4 61 1.32E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2904 a6864fc22171403deaaf8ddb8429acc2 257 SUPERFAMILY SSF100950 73 234 3.4E-37 T 21-04-2016 SDY_0757 a666993c2805636b57cfebf493d2407c 512 Gene3D G3DSA:3.40.190.10 130 280 1.0E-51 T 21-04-2016 SDY_0757 a666993c2805636b57cfebf493d2407c 512 PANTHER PTHR30290:SF32 15 512 0.0 T 21-04-2016 SDY_0757 a666993c2805636b57cfebf493d2407c 512 Gene3D G3DSA:3.10.105.10 281 481 6.0E-61 T 21-04-2016 SDY_0757 a666993c2805636b57cfebf493d2407c 512 SUPERFAMILY SSF53850 30 510 8.59E-145 T 21-04-2016 SDY_0757 a666993c2805636b57cfebf493d2407c 512 PIRSF PIRSF002741 24 511 4.7E-108 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_0757 a666993c2805636b57cfebf493d2407c 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 7.4E-98 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_0757 a666993c2805636b57cfebf493d2407c 512 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_0757 a666993c2805636b57cfebf493d2407c 512 PANTHER PTHR30290 15 512 0.0 T 21-04-2016 SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 SUPERFAMILY SSF141523 94 232 4.84E-30 T 21-04-2016 SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 Gene3D G3DSA:3.10.350.10 40 86 1.3E-7 T 21-04-2016 IPR018392 LysM domain SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 Pfam PF01476 LysM domain 42 85 1.7E-8 T 21-04-2016 IPR018392 LysM domain SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 3.4E-21 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 SMART SM00257 41 85 4.0E-8 T 21-04-2016 IPR018392 LysM domain SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 PANTHER PTHR30582:SF7 48 309 5.8E-220 T 21-04-2016 SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 Gene3D G3DSA:2.40.440.10 90 234 2.7E-35 T 21-04-2016 SDY_1909 e2938a114fc51e499bb04e4c4f061e35 334 PANTHER PTHR30582 48 309 5.8E-220 T 21-04-2016 SDY_1786 af4bfb8d18d98f3d2fcec11e649ed5c9 180 Pfam PF02311 AraC-like ligand binding domain 27 157 9.2E-13 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_1786 af4bfb8d18d98f3d2fcec11e649ed5c9 180 PANTHER PTHR11019 27 180 3.6E-66 T 21-04-2016 SDY_1786 af4bfb8d18d98f3d2fcec11e649ed5c9 180 PANTHER PTHR11019:SF127 27 180 3.6E-66 T 21-04-2016 SDY_1786 af4bfb8d18d98f3d2fcec11e649ed5c9 180 Gene3D G3DSA:2.60.120.10 30 89 1.3E-9 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1786 af4bfb8d18d98f3d2fcec11e649ed5c9 180 SUPERFAMILY SSF51182 18 94 1.11E-10 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 Gene3D G3DSA:2.60.300.12 1 97 2.9E-17 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-28 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072 1 97 5.4E-95 T 21-04-2016 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072 147 188 5.4E-95 T 21-04-2016 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01106 NifU-like domain 111 177 2.6E-20 T 21-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.4E-12 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072:SF37 1 97 5.4E-95 T 21-04-2016 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072:SF37 147 188 5.4E-95 T 21-04-2016 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.432 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF117916 95 184 2.14E-25 T 21-04-2016 SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 21-04-2016 IPR000361 FeS cluster biogenesis SDY_3662 8924b747df2ef2fc99fc59d93ddb35c8 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.7E-100 T 21-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 SDY_3309 994df575ca9a00e2f723808a842887e5 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 7.0E-116 T 21-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 SDY_3309 994df575ca9a00e2f723808a842887e5 329 PANTHER PTHR10314 9 323 3.8E-150 T 21-04-2016 SDY_3309 994df575ca9a00e2f723808a842887e5 329 SUPERFAMILY SSF53686 11 321 1.31E-93 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_3309 994df575ca9a00e2f723808a842887e5 329 PANTHER PTHR10314:SF17 9 323 3.8E-150 T 21-04-2016 SDY_3309 994df575ca9a00e2f723808a842887e5 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SDY_3309 994df575ca9a00e2f723808a842887e5 329 Gene3D G3DSA:3.40.50.1100 76 323 1.5E-76 T 21-04-2016 SDY_3309 994df575ca9a00e2f723808a842887e5 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 4.9E-78 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_1421 19bbd15510f3b13c4b3a32efd56d5eed 100 SUPERFAMILY SSF46689 4 94 1.56E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1421 19bbd15510f3b13c4b3a32efd56d5eed 100 PANTHER PTHR33215 3 100 1.2E-16 T 21-04-2016 SDY_1421 19bbd15510f3b13c4b3a32efd56d5eed 100 Gene3D G3DSA:1.10.10.60 9 90 1.4E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1421 19bbd15510f3b13c4b3a32efd56d5eed 100 Pfam PF01527 Transposase 3 74 8.9E-17 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 SUPERFAMILY SSF48576 1 280 6.78E-88 T 21-04-2016 IPR008949 Isoprenoid synthase domain SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 PANTHER PTHR12001 1 294 1.2E-110 T 21-04-2016 IPR017446 Polyprenyl synthetase-related SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 PANTHER PTHR12001:SF23 1 294 1.2E-110 T 21-04-2016 SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 Pfam PF00348 Polyprenyl synthetase 34 271 1.8E-56 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 Gene3D G3DSA:1.10.600.10 2 295 6.5E-91 T 21-04-2016 IPR008949 Isoprenoid synthase domain SDY_0309 a3f97f10bebcc599f65f6498301607e7 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_2183 fab7a1f76f09fd5564af3d3376df214f 87 ProDom PD064930 YEHE MEMBRANE OUTER STY2382 PRECURSOR ECS2918 SIGNAL 1 83 2.0E-44 T 21-04-2016 IPR020386 Uncharacterised protein family YehE SDY_2183 fab7a1f76f09fd5564af3d3376df214f 87 Pfam PF10836 Protein of unknown function (DUF2574) 1 84 2.1E-45 T 21-04-2016 IPR020386 Uncharacterised protein family YehE SDY_1740 7e851968004280d89a660d493ce21efc 545 Pfam PF01136 Peptidase family U32 93 319 8.1E-72 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1740 7e851968004280d89a660d493ce21efc 545 PANTHER PTHR30217:SF10 15 508 1.6E-240 T 21-04-2016 SDY_1740 7e851968004280d89a660d493ce21efc 545 ProSitePatterns PS01276 Peptidase family U32 signature. 175 193 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1740 7e851968004280d89a660d493ce21efc 545 PANTHER PTHR30217 15 508 1.6E-240 T 21-04-2016 SDY_1740 7e851968004280d89a660d493ce21efc 545 Pfam PF12392 Collagenase 405 509 3.9E-15 T 21-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 PANTHER PTHR30614:SF1 1 224 5.2E-145 T 21-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 SUPERFAMILY SSF161098 14 210 8.5E-39 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 PANTHER PTHR30614 1 224 5.2E-145 T 21-04-2016 SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 Gene3D G3DSA:1.10.3720.10 13 223 2.0E-45 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.8E-18 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0588 4eff4b7ee0ad58011f2270ddd618bc6a 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.2E-24 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 9.7E-96 T 21-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 PANTHER PTHR30231:SF0 1 242 8.3E-163 T 21-04-2016 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 Gene3D G3DSA:3.30.420.10 7 184 9.1E-65 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 2.9E-99 T 21-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 Pfam PF00929 Exonuclease 9 175 3.8E-42 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 SUPERFAMILY SSF53098 7 184 1.48E-52 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 PANTHER PTHR30231 1 242 8.3E-163 T 21-04-2016 SDY_0234 85ad5cc0823e0561bb14e68fe65f43d0 243 SMART SM00479 7 184 1.9E-51 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_3127 aa23d1fc6ea80021e2d875ccd0d39c88 235 Pfam PF04231 Endonuclease I 45 229 8.0E-45 T 21-04-2016 IPR007346 Endonuclease I GO:0004518 SDY_3127 aa23d1fc6ea80021e2d875ccd0d39c88 235 PANTHER PTHR33607 1 232 3.7E-70 T 21-04-2016 SDY_3127 aa23d1fc6ea80021e2d875ccd0d39c88 235 SUPERFAMILY SSF54060 26 230 5.77E-88 T 21-04-2016 SDY_4172 2268f4daf4bf7885738375c940773157 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 4.9E-21 T 21-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SDY_4172 2268f4daf4bf7885738375c940773157 142 Gene3D G3DSA:2.60.40.790 9 134 3.3E-15 T 21-04-2016 IPR008978 HSP20-like chaperone SDY_4172 2268f4daf4bf7885738375c940773157 142 PANTHER PTHR11527:SF127 1 142 8.3E-88 T 21-04-2016 SDY_4172 2268f4daf4bf7885738375c940773157 142 PANTHER PTHR11527 1 142 8.3E-88 T 21-04-2016 IPR031107 Small heat shock protein HSP20 SDY_4172 2268f4daf4bf7885738375c940773157 142 SUPERFAMILY SSF49764 30 134 4.19E-18 T 21-04-2016 IPR008978 HSP20-like chaperone SDY_4172 2268f4daf4bf7885738375c940773157 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 47.247 T 21-04-2016 IPR022848 Small heat shock protein IbpB SDY_0962 320b045035e5520c14cf47f4cbe19d20 214 SUPERFAMILY SSF159270 19 213 1.05E-63 T 21-04-2016 IPR023373 YmcC-like domain SDY_0962 320b045035e5520c14cf47f4cbe19d20 214 Gene3D G3DSA:2.40.360.10 16 213 8.6E-81 T 21-04-2016 IPR023373 YmcC-like domain SDY_0962 320b045035e5520c14cf47f4cbe19d20 214 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 210 7.4E-67 T 21-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB SDY_0057 6f8766ea2408556adbf1efec597b1744 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 129 1.2E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0057 6f8766ea2408556adbf1efec597b1744 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 48 5.4E-4 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0057 6f8766ea2408556adbf1efec597b1744 203 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 8 203 66.299 T 21-04-2016 IPR023446 Carnitine operon protein CaiE UniPathway: UPA00117 SDY_0057 6f8766ea2408556adbf1efec597b1744 203 PANTHER PTHR13061 12 192 8.4E-59 T 21-04-2016 SDY_0057 6f8766ea2408556adbf1efec597b1744 203 Gene3D G3DSA:2.160.10.10 9 172 8.1E-38 T 21-04-2016 SDY_0057 6f8766ea2408556adbf1efec597b1744 203 SUPERFAMILY SSF51161 9 173 4.85E-40 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_1179 0149e5724b45f7c2fbc124fdbec48ffc 190 SUPERFAMILY SSF54593 2 188 3.66E-71 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_1179 0149e5724b45f7c2fbc124fdbec48ffc 190 Gene3D G3DSA:3.10.180.10 2 189 6.7E-81 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_1179 0149e5724b45f7c2fbc124fdbec48ffc 190 Pfam PF06185 YecM protein 12 187 1.5E-72 T 21-04-2016 IPR010393 Protein of unknown function DUF991 SDY_1179 0149e5724b45f7c2fbc124fdbec48ffc 190 PANTHER PTHR37519 4 188 1.3E-113 T 21-04-2016 SDY_1179 0149e5724b45f7c2fbc124fdbec48ffc 190 PANTHER PTHR37519:SF1 4 188 1.3E-113 T 21-04-2016 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 5.7E-178 T 21-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 72.711 T 21-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 1.0E-26 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 21-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 178 6.6E-40 T 21-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Gene3D G3DSA:1.10.645.10 216 585 6.5E-46 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 138 159 - T 21-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 SUPERFAMILY SSF143243 25 229 1.24E-58 T 21-04-2016 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 600 41.83 T 21-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 176 4.0E-45 T 21-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 25 185 25.255 T 21-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 PANTHER PTHR11993:SF28 147 595 0.0 T 21-04-2016 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 7.2E-102 T 21-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 SUPERFAMILY SSF56762 225 600 8.11E-119 T 21-04-2016 IPR029014 NiFe hydrogenase-like SDY_2482 0a75ba610e3bfa8aa274f4c07d110dd4 600 PANTHER PTHR11993 147 595 0.0 T 21-04-2016 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 PANTHER PTHR11079 19 166 1.9E-52 T 21-04-2016 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 21-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 Gene3D G3DSA:3.40.140.10 17 162 6.0E-61 T 21-04-2016 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 49.583 T 21-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 SUPERFAMILY SSF53927 15 168 2.01E-59 T 21-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SDY_2749 e771bfb403f173b3722f25e575848fe3 178 Pfam PF14437 MafB19-like deaminase 18 164 1.2E-33 T 21-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 SMART SM00382 33 229 1.4E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 PANTHER PTHR24220 10 266 4.0E-196 T 21-04-2016 SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 Pfam PF00005 ABC transporter 25 172 1.0E-28 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 SUPERFAMILY SSF52540 8 237 4.35E-63 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 PANTHER PTHR24220:SF368 10 266 4.0E-196 T 21-04-2016 SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 Gene3D G3DSA:3.40.50.300 7 238 3.3E-66 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3376 c64901c38cc419fd95efac45ef8a5b3e 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2491 957393d58ba08f00c4dc8206d69808a0 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.961 T 21-04-2016 IPR007334 Uncharacterised protein family UPF0208 SDY_2491 957393d58ba08f00c4dc8206d69808a0 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.6E-57 T 21-04-2016 IPR007334 Uncharacterised protein family UPF0208 SDY_4760 6c0e5b4d7f0c28d8b82dd7cd236da4e2 90 PANTHER PTHR33293 1 89 4.3E-20 T 21-04-2016 SDY_4760 6c0e5b4d7f0c28d8b82dd7cd236da4e2 90 PANTHER PTHR33293:SF2 1 89 4.3E-20 T 21-04-2016 SDY_4760 6c0e5b4d7f0c28d8b82dd7cd236da4e2 90 Pfam PF12759 InsA C-terminal domain 42 87 2.6E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4760 6c0e5b4d7f0c28d8b82dd7cd236da4e2 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 PANTHER PTHR12149:SF8 1 285 2.1E-119 T 21-04-2016 SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 Gene3D G3DSA:3.30.200.20 32 90 8.5E-5 T 21-04-2016 SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 SUPERFAMILY SSF56112 4 280 8.41E-41 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 Gene3D G3DSA:3.90.1200.10 96 259 3.5E-13 T 21-04-2016 SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 Pfam PF03881 Fructosamine kinase 1 285 4.5E-114 T 21-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 PIRSF PIRSF006221 1 286 2.4E-95 T 21-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SDY_1818 ed162b2d8449c84672a7dbd775088b3b 286 PANTHER PTHR12149 1 285 2.1E-119 T 21-04-2016 SDY_0046 ba6191e60d52aa485969dd92928859eb 72 Pfam PF10837 Protein of unknown function (DUF2575) 2 72 6.0E-48 T 21-04-2016 IPR020105 Uncharacterised protein family YaaY SDY_0046 ba6191e60d52aa485969dd92928859eb 72 ProDom PD056390 YAAY CYTOPLASMIC STY0053 ECS0027 3 72 4.0E-34 T 21-04-2016 IPR020105 Uncharacterised protein family YaaY SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 285 295 - T 21-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 SMART SM00404 246 336 6.3E-4 T 21-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 SMART SM00195 209 341 7.2E-37 T 21-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 Pfam PF14378 PAP2 superfamily 34 100 9.0E-7 T 21-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 PANTHER PTHR10159 71 181 7.9E-45 T 21-04-2016 IPR024950 Dual specificity phosphatase SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 PANTHER PTHR10159 197 341 7.9E-45 T 21-04-2016 IPR024950 Dual specificity phosphatase SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 Gene3D G3DSA:3.90.190.10 192 341 5.7E-24 T 21-04-2016 IPR029021 Protein-tyrosine phosphatase-like SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 Pfam PF00782 Dual specificity phosphatase, catalytic domain 217 340 1.4E-26 T 21-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 PANTHER PTHR10159:SF370 71 181 7.9E-45 T 21-04-2016 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 PANTHER PTHR10159:SF370 197 341 7.9E-45 T 21-04-2016 SDY_1776 e20d9f256f457d2b2c8c1093ea5f0b4a 341 SUPERFAMILY SSF52799 192 340 3.26E-25 T 21-04-2016 IPR029021 Protein-tyrosine phosphatase-like SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Gene3D G3DSA:3.40.50.970 362 560 2.7E-71 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 PANTHER PTHR18968:SF128 1 562 0.0 T 21-04-2016 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 PANTHER PTHR18968 1 562 0.0 T 21-04-2016 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 179 6.6E-58 T 21-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 SUPERFAMILY SSF52467 165 361 6.55E-56 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Gene3D G3DSA:3.40.50.1220 196 358 6.4E-61 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Gene3D G3DSA:3.40.50.970 12 185 3.7E-72 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 21-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 2.0E-48 T 21-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 SUPERFAMILY SSF52518 366 560 1.91E-66 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 4.4E-201 T 21-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 SUPERFAMILY SSF52518 10 185 1.68E-59 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_4155 58c18901bda684ca48bf29513cec0ecc 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 1.6E-42 T 21-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 Pfam PF01740 STAS domain 444 544 6.6E-12 T 21-04-2016 IPR002645 STAS domain SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 Gene3D G3DSA:3.30.750.24 444 548 1.2E-12 T 21-04-2016 IPR002645 STAS domain SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 PANTHER PTHR11814:SF112 1 550 4.5E-290 T 21-04-2016 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 ProSitePatterns PS01130 SLC26A transporters signature. 49 70 - T 21-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 Pfam PF00916 Sulfate permease family 20 402 1.5E-75 T 21-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 PANTHER PTHR11814 1 550 4.5E-290 T 21-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 TIGRFAM TIGR00815 sulP: sulfate permease 9 546 1.1E-150 T 21-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SDY_1255 ae70070967117ec01f2a7e5d9a618e18 550 SUPERFAMILY SSF52091 443 548 7.85E-15 T 21-04-2016 IPR002645 STAS domain SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 Gene3D G3DSA:1.10.3720.10 6 227 1.0E-40 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 SUPERFAMILY SSF161098 8 216 1.7E-37 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 2.1E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 PANTHER PTHR30133:SF2 1 238 2.4E-160 T 21-04-2016 SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 PANTHER PTHR30133 1 238 2.4E-160 T 21-04-2016 SDY_2406 dd839ad15ad22f46602dd80ddbadf573 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 86 2.8E-12 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 PANTHER PTHR10889:SF3 1 256 2.7E-120 T 21-04-2016 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 6.3E-54 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 SUPERFAMILY SSF51569 6 246 2.2E-82 T 21-04-2016 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 55.255 T 21-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 PIRSF PIRSF001357 5 255 2.6E-78 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 SMART SM01133 10 246 6.8E-81 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 PANTHER PTHR10889 1 256 2.7E-120 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 Gene3D G3DSA:3.20.20.70 3 254 7.4E-94 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4641 9b90291244a6893c80b1298e3e5413e7 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 8.8E-89 T 21-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 PANTHER PTHR32093:SF0 1 256 5.2E-158 T 21-04-2016 SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 PANTHER PTHR32093 1 256 5.2E-158 T 21-04-2016 SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 Pfam PF11924 Invasin beta-domain of outer membrane 1 256 3.1E-107 T 21-04-2016 IPR024519 Invasin beta-domain of outer membrane SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 PRINTS PR01369 Intimin signature 204 223 2.2E-12 T 21-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 PRINTS PR01369 Intimin signature 136 155 2.2E-12 T 21-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 SDY_1075 ecadf63126cd8bc81af16f0ea5546eff 258 PRINTS PR01369 Intimin signature 107 122 2.2E-12 T 21-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 Pfam PF00005 ABC transporter 34 174 1.9E-34 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 SUPERFAMILY SSF52540 17 258 1.96E-88 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 SMART SM00382 42 225 5.2E-17 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 5.1E-169 T 21-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 PANTHER PTHR24220:SF150 19 303 1.3E-158 T 21-04-2016 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 PANTHER PTHR24220 19 303 1.3E-158 T 21-04-2016 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 Pfam PF08402 TOBE domain 292 372 2.2E-8 T 21-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 Gene3D G3DSA:3.40.50.300 9 253 7.1E-82 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2026 f1d7d4269f46776b50ab422d2be39cf4 378 SUPERFAMILY SSF50331 250 364 1.36E-7 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_1091 77b88460e5e3a4ffd93e7faadabfae85 465 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 219 449 7.6E-62 T 21-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SDY_1091 77b88460e5e3a4ffd93e7faadabfae85 465 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 103 6.4E-21 T 21-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SDY_1091 77b88460e5e3a4ffd93e7faadabfae85 465 PANTHER PTHR30288:SF0 2 464 6.5E-102 T 21-04-2016 SDY_1091 77b88460e5e3a4ffd93e7faadabfae85 465 PANTHER PTHR30288 2 464 6.5E-102 T 21-04-2016 SDY_3812 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3812 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_3926 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3926 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_1560 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1560 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_4197 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4197 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_3767 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3767 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_3927 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3927 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_3441 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3441 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_4107 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4107 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_4105 4747ac224ae797b8cb66210de76557ce 125 Pfam PF03400 IS1 transposase 1 125 3.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4105 4747ac224ae797b8cb66210de76557ce 125 PANTHER PTHR33293 1 124 1.0E-42 T 21-04-2016 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 PANTHER PTHR33603:SF1 1 154 4.7E-70 T 21-04-2016 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 PANTHER PTHR33603 1 154 4.7E-70 T 21-04-2016 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 2.9E-46 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 Gene3D G3DSA:3.40.1280.10 2 154 5.5E-53 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.079 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 SUPERFAMILY SSF75217 2 153 3.51E-50 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 PIRSF PIRSF004505 1 154 6.1E-40 T 21-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_0558 e1cf7bcdabbdf66cf859974522a5a4b9 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 1.7E-87 T 21-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 Gene3D G3DSA:3.30.110.70 1 104 4.3E-39 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 SUPERFAMILY SSF117782 1 106 9.16E-39 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 Pfam PF01906 Putative heavy-metal-binding 1 104 2.2E-40 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.701 T 21-04-2016 IPR002765 Uncharacterised protein family UPF0145 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 PANTHER PTHR34068:SF1 1 107 5.1E-46 T 21-04-2016 SDY_2397 f07736405e77d34a5b38d7f3018c699a 107 PANTHER PTHR34068 1 107 5.1E-46 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 Gene3D G3DSA:3.30.70.20 47 93 6.6E-4 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 PANTHER PTHR30352:SF10 94 292 2.2E-217 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 PANTHER PTHR30352:SF10 1 76 2.2E-217 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 SUPERFAMILY SSF54862 23 94 9.63E-7 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 Pfam PF13353 4Fe-4S single cluster domain 34 143 3.8E-10 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 Gene3D G3DSA:3.80.30.10 116 291 2.6E-50 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 SUPERFAMILY SSF102114 91 257 3.73E-10 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 Pfam PF04055 Radical SAM superfamily 41 222 1.9E-21 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 PANTHER PTHR30352 94 292 2.2E-217 T 21-04-2016 SDY_3787 30ab8b29adfe74c7505fb29006ef1839 292 PANTHER PTHR30352 1 76 2.2E-217 T 21-04-2016 SDY_1553 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 PANTHER PTHR30561:SF2 1 112 1.9E-77 T 21-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 SDY_1553 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 SUPERFAMILY SSF103481 8 107 8.37E-17 T 21-04-2016 SDY_1553 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 PANTHER PTHR30561 1 112 1.9E-77 T 21-04-2016 SDY_1553 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 121 29.763 T 21-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 SDY_1553 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.1E-26 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SDY_4447 54aa48de717c15e3a909b61623232ae8 415 PANTHER PTHR11785:SF415 1 409 1.3E-167 T 21-04-2016 SDY_4447 54aa48de717c15e3a909b61623232ae8 415 PIRSF PIRSF006060 1 411 1.9E-58 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4447 54aa48de717c15e3a909b61623232ae8 415 PANTHER PTHR11785 1 409 1.3E-167 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4447 54aa48de717c15e3a909b61623232ae8 415 Pfam PF13520 Amino acid permease 8 366 3.6E-29 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 PANTHER PTHR11019:SF134 23 374 1.8E-188 T 21-04-2016 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 SUPERFAMILY SSF46689 319 369 5.82E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 SUPERFAMILY SSF46689 267 317 1.61E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 Pfam PF06719 AraC-type transcriptional regulator N-terminus 104 254 9.8E-38 T 21-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 Gene3D G3DSA:1.10.10.60 320 364 2.1E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 PANTHER PTHR11019 23 374 1.8E-188 T 21-04-2016 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 Pfam PF12833 Helix-turn-helix domain 289 364 2.4E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 Gene3D G3DSA:1.10.10.60 264 319 1.8E-14 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3062 b2fcfe570ccd88baab7acfca3c0efabc 375 SMART SM00342 283 366 2.4E-30 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 Gene3D G3DSA:2.40.170.20 166 746 1.5E-129 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 Gene3D G3DSA:2.170.130.10 50 165 3.8E-37 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 163 8.7E-29 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 SUPERFAMILY SSF56935 34 746 2.75E-140 T 21-04-2016 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 PANTHER PTHR30069 335 624 0.0 T 21-04-2016 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 PANTHER PTHR30069 8 279 0.0 T 21-04-2016 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 Pfam PF00593 TonB dependent receptor 466 744 1.5E-33 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 746 1.5E-172 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 PANTHER PTHR30069:SF5 335 624 0.0 T 21-04-2016 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 PANTHER PTHR30069:SF5 8 279 0.0 T 21-04-2016 SDY_0512 12da4e0105d9e2a31c9b8b6ab4964565 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_3550 4a74e0ac1f6f56f37666baa46dc98354 164 PIRSF PIRSF030840 1 162 1.2E-82 T 21-04-2016 IPR010413 Heme utilization carrier protein HutX-like SDY_3550 4a74e0ac1f6f56f37666baa46dc98354 164 Pfam PF06228 Haem utilisation ChuX/HutX 22 156 2.2E-29 T 21-04-2016 IPR010413 Heme utilization carrier protein HutX-like SDY_3550 4a74e0ac1f6f56f37666baa46dc98354 164 SUPERFAMILY SSF144064 6 159 4.19E-44 T 21-04-2016 SDY_3550 4a74e0ac1f6f56f37666baa46dc98354 164 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 6 156 2.9E-60 T 21-04-2016 IPR010413 Heme utilization carrier protein HutX-like SDY_3550 4a74e0ac1f6f56f37666baa46dc98354 164 Gene3D G3DSA:3.40.1570.10 5 161 2.0E-64 T 21-04-2016 SDY_1106 a52a7859fbfd934bc77137489798d420 182 PANTHER PTHR14269:SF13 2 179 2.3E-101 T 21-04-2016 SDY_1106 a52a7859fbfd934bc77137489798d420 182 PANTHER PTHR14269 2 179 2.3E-101 T 21-04-2016 SDY_1106 a52a7859fbfd934bc77137489798d420 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.88 T 21-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_1106 a52a7859fbfd934bc77137489798d420 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 7.9E-18 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SDY_1106 a52a7859fbfd934bc77137489798d420 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 1.6E-66 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_1106 a52a7859fbfd934bc77137489798d420 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SDY_1106 a52a7859fbfd934bc77137489798d420 182 PIRSF PIRSF000847 1 179 7.2E-43 T 21-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_4382 af3247b4ef0697e60709ffa780f07258 286 SUPERFAMILY SSF51735 2 252 2.46E-61 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4382 af3247b4ef0697e60709ffa780f07258 286 Pfam PF05368 NmrA-like family 2 220 4.2E-24 T 21-04-2016 IPR008030 NmrA-like domain SDY_4382 af3247b4ef0697e60709ffa780f07258 286 Gene3D G3DSA:3.40.50.720 2 218 5.3E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4382 af3247b4ef0697e60709ffa780f07258 286 PANTHER PTHR14194 2 281 4.9E-119 T 21-04-2016 SDY_4382 af3247b4ef0697e60709ffa780f07258 286 PANTHER PTHR14194:SF73 2 281 4.9E-119 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Pfam PF13291 ACT domain 622 699 4.3E-17 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Gene3D G3DSA:3.10.20.30 387 448 4.1E-23 T 21-04-2016 IPR012675 Beta-grasp domain SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Pfam PF13328 HD domain 26 175 2.9E-53 T 21-04-2016 IPR003607 HD/PDEase domain SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Gene3D G3DSA:3.30.460.10 178 324 5.7E-48 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SUPERFAMILY SSF81271 375 447 3.71E-21 T 21-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Gene3D G3DSA:3.30.70.260 627 697 1.3E-6 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SUPERFAMILY SSF109604 3 190 1.35E-75 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 PANTHER PTHR21262:SF0 3 702 0.0 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 PANTHER PTHR21262 3 702 0.0 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SMART SM00954 235 345 2.8E-63 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SUPERFAMILY SSF81301 180 392 1.52E-62 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 2.2E-294 T 21-04-2016 IPR004811 RelA/SpoT family GO:0015969 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SUPERFAMILY SSF55021 627 699 1.51E-5 T 21-04-2016 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.4E-36 T 21-04-2016 IPR007685 RelA/SpoT GO:0015969 SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 SMART SM00471 41 153 1.2E-11 T 21-04-2016 IPR003607 HD/PDEase domain SDY_4082 12fb88441bae3d044862f38d7ac079f8 702 Pfam PF02824 TGS domain 388 447 1.7E-21 T 21-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375:SF117 9 336 2.7E-191 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 191 263 8.7E-31 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375 9 336 2.7E-191 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 21-04-2016 SDY_3426 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-150 T 21-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SDY_2811 20760506a9d7bc137b4820589edcbbdf 159 PANTHER PTHR35867 2 153 1.0E-44 T 21-04-2016 SDY_2811 20760506a9d7bc137b4820589edcbbdf 159 PIRSF PIRSF004923 1 150 4.6E-44 T 21-04-2016 IPR026268 Protein RseC SDY_2811 20760506a9d7bc137b4820589edcbbdf 159 PANTHER PTHR35867:SF1 2 153 1.0E-44 T 21-04-2016 SDY_2811 20760506a9d7bc137b4820589edcbbdf 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.3E-32 T 21-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC SDY_2178 4c6db300ae97008fcfe3709ab58a5c0e 132 Pfam PF03400 IS1 transposase 2 132 3.7E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2178 4c6db300ae97008fcfe3709ab58a5c0e 132 PANTHER PTHR33293 4 127 5.8E-22 T 21-04-2016 SDY_4617 637344b02c263cec11905ff193f54454 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 45.615 T 21-04-2016 IPR020914 Uncharacterised protein family UPF0442 SDY_4617 637344b02c263cec11905ff193f54454 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 146 3.4E-31 T 21-04-2016 IPR024528 Threonine/Serine exporter, ThrE SDY_4617 637344b02c263cec11905ff193f54454 157 PANTHER PTHR34390 1 157 4.5E-50 T 21-04-2016 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 SMART SM00729 84 293 1.9E-15 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 SUPERFAMILY SSF102114 52 316 8.76E-68 T 21-04-2016 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.8E-164 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF04055 Radical SAM superfamily 91 251 1.1E-14 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.4E-7 T 21-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.267 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 PIRSF PIRSF005963 2 321 3.2E-131 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 Gene3D G3DSA:3.20.20.70 55 312 1.2E-71 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_0550 723afa78dd8cb0f4392bbdc68d14adc4 321 PANTHER PTHR10949 4 321 5.3E-183 T 21-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SDY_0041 0c4b65c44498a22741210287e17540e2 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-66 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 PANTHER PTHR21012 2 126 1.3E-67 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 5.5E-69 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 Gene3D G3DSA:2.40.40.20 1 124 6.7E-56 T 21-04-2016 SDY_0041 0c4b65c44498a22741210287e17540e2 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-47 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 SUPERFAMILY SSF50692 1 121 7.95E-48 T 21-04-2016 IPR009010 Aspartate decarboxylase-like domain SDY_0041 0c4b65c44498a22741210287e17540e2 126 PIRSF PIRSF006246 1 125 9.6E-51 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.341 T 21-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SDY_0041 0c4b65c44498a22741210287e17540e2 126 PANTHER PTHR21012:SF0 2 126 1.3E-67 T 21-04-2016 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 21-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.4E-46 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.4E-46 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.4E-46 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.4E-46 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.4E-46 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 21-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 21-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 Gene3D G3DSA:3.20.20.100 5 271 2.7E-102 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 SUPERFAMILY SSF51430 6 268 5.24E-90 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 PANTHER PTHR11732 3 274 1.1E-133 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 Pfam PF00248 Aldo/keto reductase family 201 260 5.1E-10 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3061 6cf83c77538de63b9f3983d23f9bfde9 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.3E-38 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_1133 8974351db095ebb27d5d1e775985ad6d 122 Hamap MF_01435 Protein YebF [yebF]. 5 122 35.306 T 21-04-2016 IPR020236 Uncharacterised protein family YebF SDY_1133 8974351db095ebb27d5d1e775985ad6d 122 Pfam PF13995 YebF-like protein 32 120 3.1E-38 T 21-04-2016 IPR025603 YebF/Colicin-M immunity protein SDY_1133 8974351db095ebb27d5d1e775985ad6d 122 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 24 122 7.0E-53 T 21-04-2016 IPR025603 YebF/Colicin-M immunity protein SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.6E-109 T 21-04-2016 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 21-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 21-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.4E-28 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 2.8E-93 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 21-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 Gene3D G3DSA:3.60.10.10 1 267 1.0E-86 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 PANTHER PTHR22748:SF7 1 268 9.0E-140 T 21-04-2016 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 PANTHER PTHR22748 1 268 9.0E-140 T 21-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SDY_1527 be46e3ff85b73b51f47a17e28fb2dfac 268 SUPERFAMILY SSF56219 1 267 2.75E-87 T 21-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 Gene3D G3DSA:3.30.70.270 131 290 1.3E-45 T 21-04-2016 SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 128 285 1.6E-38 T 21-04-2016 IPR000160 GGDEF domain SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 PANTHER PTHR10799 87 296 1.4E-21 T 21-04-2016 SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 283 1.5E-44 T 21-04-2016 IPR000160 GGDEF domain SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 Pfam PF13682 Chemoreceptor zinc-binding domain 22 89 7.1E-5 T 21-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 SUPERFAMILY SSF55073 134 289 7.22E-41 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 PANTHER PTHR10799:SF750 87 296 1.4E-21 T 21-04-2016 SDY_1590 fc02a31788ca9ca47ed97cfedf441258 296 SMART SM00267 118 287 4.5E-61 T 21-04-2016 IPR000160 GGDEF domain SDY_0655 e17cd45ed83cca13cfc0b53032de7c44 188 PANTHER PTHR33420 1 188 5.2E-74 T 21-04-2016 SDY_0655 e17cd45ed83cca13cfc0b53032de7c44 188 Pfam PF00419 Fimbrial protein 31 188 6.2E-20 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0655 e17cd45ed83cca13cfc0b53032de7c44 188 PANTHER PTHR33420:SF11 1 188 5.2E-74 T 21-04-2016 SDY_0655 e17cd45ed83cca13cfc0b53032de7c44 188 SUPERFAMILY SSF49401 30 188 1.34E-35 T 21-04-2016 IPR008966 Adhesion domain SDY_0655 e17cd45ed83cca13cfc0b53032de7c44 188 Gene3D G3DSA:2.60.40.1090 29 188 1.1E-36 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 SMART SM00463 95 173 7.9E-23 T 21-04-2016 IPR002625 Smr domain SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 PANTHER PTHR35562:SF1 1 183 1.4E-125 T 21-04-2016 SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 Pfam PF01713 Smr domain 98 172 1.0E-17 T 21-04-2016 IPR002625 Smr domain SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 PANTHER PTHR35562 1 183 1.4E-125 T 21-04-2016 SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.491 T 21-04-2016 IPR022990 Uncharacterised protein family UPF0115 SDY_2529 8b0c63d0cb133c4b4063ff5546d4abd3 183 SUPERFAMILY SSF160443 96 170 2.22E-9 T 21-04-2016 IPR002625 Smr domain SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 PANTHER PTHR30176:SF2 2 287 4.9E-96 T 21-04-2016 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 Pfam PF12801 4Fe-4S binding domain 178 211 7.2E-5 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 Pfam PF12801 4Fe-4S binding domain 83 126 2.6E-12 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 Gene3D G3DSA:3.30.70.20 191 279 2.9E-16 T 21-04-2016 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 SUPERFAMILY SSF54862 191 280 1.0E-20 T 21-04-2016 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 SUPERFAMILY SSF54862 104 143 1.0E-20 T 21-04-2016 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 PANTHER PTHR30176 2 287 4.9E-96 T 21-04-2016 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 1.1E-116 T 21-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SDY_0874 b608ba0929833a2447274f1c6fe2e990 287 Pfam PF13237 4Fe-4S dicluster domain 221 270 4.6E-7 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PANTHER PTHR23504 1 318 1.8E-84 T 21-04-2016 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PANTHER PTHR23504:SF14 1 318 1.8E-84 T 21-04-2016 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 Gene3D G3DSA:1.20.1250.20 125 314 5.6E-28 T 21-04-2016 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 Gene3D G3DSA:1.20.1250.20 2 114 9.8E-21 T 21-04-2016 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 SUPERFAMILY SSF103473 1 317 7.24E-51 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 Pfam PF07690 Major Facilitator Superfamily 139 308 2.4E-20 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PRINTS PR01035 Tetracycline resistance protein signature 59 81 1.5E-8 T 21-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PRINTS PR01035 Tetracycline resistance protein signature 29 50 1.5E-8 T 21-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PRINTS PR01035 Tetracycline resistance protein signature 263 286 1.5E-8 T 21-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PRINTS PR01035 Tetracycline resistance protein signature 2 26 1.5E-8 T 21-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SDY_2297 ae26e2841af5c969e6ffd959210427a2 323 PRINTS PR01035 Tetracycline resistance protein signature 228 248 1.5E-8 T 21-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SDY_2597 5388b715a2864d9a327b846216cc8633 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 129 2.8E-54 T 21-04-2016 IPR010749 Protein of unknown function DUF1323 SDY_2597 5388b715a2864d9a327b846216cc8633 130 Gene3D G3DSA:1.10.10.10 7 48 9.7E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2597 5388b715a2864d9a327b846216cc8633 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 1.0E-57 T 21-04-2016 IPR010749 Protein of unknown function DUF1323 SDY_2597 5388b715a2864d9a327b846216cc8633 130 SUPERFAMILY SSF46955 5 82 1.83E-13 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:3.30.70.20 195 236 2.6E-25 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Pfam PF13247 4Fe-4S dicluster domain 176 272 1.8E-37 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 437 3.8E-31 T 21-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:1.10.3650.10 360 435 3.5E-33 T 21-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 SUPERFAMILY SSF54862 1 504 5.23E-188 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:3.30.70.20 437 466 2.0E-76 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:3.30.70.20 237 359 2.0E-76 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938 1 31 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938 171 337 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938 135 144 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 0.0 T 21-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938:SF8 1 31 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938:SF8 171 337 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 PANTHER PTHR11938:SF8 135 144 5.4E-129 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:3.30.70.20 5 53 1.3E-17 T 21-04-2016 SDY_1280 fb010fe1d2c2045c31c672d0e23588a8 512 Gene3D G3DSA:3.30.70.20 174 194 1.3E-17 T 21-04-2016 SDY_3665 b3eb59651abc084267e3450973534752 292 PANTHER PTHR34611 2 292 4.6E-180 T 21-04-2016 SDY_3665 b3eb59651abc084267e3450973534752 292 Pfam PF04754 Putative transposase, YhgA-like 8 209 2.6E-87 T 21-04-2016 IPR006842 Transposase (putative), YhgA-like SDY_3665 b3eb59651abc084267e3450973534752 292 PANTHER PTHR34611:SF3 2 292 4.6E-180 T 21-04-2016 SDY_3665 b3eb59651abc084267e3450973534752 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 288 4.7E-46 T 21-04-2016 IPR010106 Conserved hypothetical protein CHP01784 SDY_1927 7e6181b7bf9656521c6f92ac2cfc88a8 317 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 11 313 1.3E-128 T 21-04-2016 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 SMART SM00862 147 223 4.7E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 SUPERFAMILY SSF52172 3 178 2.85E-39 T 21-04-2016 IPR011006 CheY-like superfamily SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 PANTHER PTHR26402 2 224 1.2E-113 T 21-04-2016 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 Pfam PF00072 Response regulator receiver domain 4 112 3.0E-29 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 Gene3D G3DSA:3.40.50.2300 3 122 6.7E-37 T 21-04-2016 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 Gene3D G3DSA:1.10.10.10 126 223 5.2E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 PANTHER PTHR26402:SF399 2 224 1.2E-113 T 21-04-2016 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 SMART SM00448 2 112 5.3E-40 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_0629 b687552c1706168d7c7deb39c158d3b3 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 4.7E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_1393 aa80de120de70fdf4c47551af5048ddb 71 PIRSF PIRSF030786 1 71 2.6E-46 T 21-04-2016 IPR007054 Lysis protein S SDY_1393 aa80de120de70fdf4c47551af5048ddb 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 4.1E-41 T 21-04-2016 IPR007054 Lysis protein S SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 SUPERFAMILY SSF52266 78 334 3.02E-39 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 SUPERFAMILY SSF52266 369 398 3.02E-39 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 Pfam PF08410 Domain of unknown function (DUF1737) 3 53 3.9E-16 T 21-04-2016 IPR013619 Domain of unknown function DUF1737 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988:SF1 156 195 1.6E-27 T 21-04-2016 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988:SF1 72 132 1.6E-27 T 21-04-2016 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988:SF1 214 329 1.6E-27 T 21-04-2016 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988 156 195 1.6E-27 T 21-04-2016 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988 72 132 1.6E-27 T 21-04-2016 SDY_1391 55cb75b2a7273d16b9bba78c0c784550 636 PANTHER PTHR31988 214 329 1.6E-27 T 21-04-2016 SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-6 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 Gene3D G3DSA:2.40.50.140 30 128 1.1E-33 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 PANTHER PTHR30001 1 489 1.5E-228 T 21-04-2016 SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF10150 Ribonuclease E/G family 124 393 7.9E-102 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 SMART SM00316 37 122 1.2E-9 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_3422 2d10212c414dea72e3a8a92fa95b0c70 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.9E-179 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SDY_2012 89f7fac50dc87ea0aa52afafd1acb99d 150 SUPERFAMILY SSF53850 1 129 2.9E-22 T 21-04-2016 SDY_2012 89f7fac50dc87ea0aa52afafd1acb99d 150 PANTHER PTHR30419:SF0 1 147 1.1E-66 T 21-04-2016 SDY_2012 89f7fac50dc87ea0aa52afafd1acb99d 150 Pfam PF03466 LysR substrate binding domain 1 124 1.0E-23 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2012 89f7fac50dc87ea0aa52afafd1acb99d 150 PANTHER PTHR30419 1 147 1.1E-66 T 21-04-2016 SDY_2012 89f7fac50dc87ea0aa52afafd1acb99d 150 Gene3D G3DSA:3.40.190.10 1 98 1.2E-19 T 21-04-2016 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 Pfam PF00206 Lyase 14 312 1.3E-84 T 21-04-2016 IPR022761 Fumarate lyase, N-terminal SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PANTHER PTHR11444:SF17 4 455 0.0 T 21-04-2016 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 Gene3D G3DSA:1.10.275.10 1 119 4.0E-49 T 21-04-2016 IPR024083 Fumarase/histidase, N-terminal SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 SUPERFAMILY SSF48557 10 454 3.3E-106 T 21-04-2016 IPR008948 L-Aspartase-like GO:0003824 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PANTHER PTHR11444 4 455 0.0 T 21-04-2016 IPR000362 Fumarate lyase family SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.4E-52 T 21-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 Gene3D G3DSA:1.10.40.30 390 445 1.0E-34 T 21-04-2016 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.9E-17 T 21-04-2016 IPR000362 Fumarate lyase family SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 21-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 Gene3D G3DSA:1.20.200.10 120 389 1.4E-88 T 21-04-2016 SDY_2021 af77d077d5b17e67ca9d7433572b93a5 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.4E-158 T 21-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 Pfam PF01292 Prokaryotic cytochrome b561 13 186 4.0E-18 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 PANTHER PTHR30074:SF5 1 216 3.1E-141 T 21-04-2016 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 SUPERFAMILY SSF81342 4 212 6.36E-54 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 PANTHER PTHR30074 1 216 3.1E-141 T 21-04-2016 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 Gene3D G3DSA:1.20.950.20 3 215 7.7E-75 T 21-04-2016 SDY_1606 e8b8574876229c5c0db23524a70e50fb 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 2.7E-69 T 21-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SDY_4097 603c045291906201e96d39c9eee49720 253 SUPERFAMILY SSF46689 197 248 2.69E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4097 603c045291906201e96d39c9eee49720 253 Pfam PF12833 Helix-turn-helix domain 169 244 1.1E-13 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4097 603c045291906201e96d39c9eee49720 253 Gene3D G3DSA:1.10.10.60 197 247 6.7E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4097 603c045291906201e96d39c9eee49720 253 PANTHER PTHR11019 1 252 1.2E-163 T 21-04-2016 SDY_4097 603c045291906201e96d39c9eee49720 253 SMART SM00342 162 244 5.4E-28 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4097 603c045291906201e96d39c9eee49720 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_4097 603c045291906201e96d39c9eee49720 253 PANTHER PTHR11019:SF104 1 252 1.2E-163 T 21-04-2016 SDY_4097 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.7E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_4097 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.7E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_1266 579511a4bcb3ed5ca93c8024cdb3f489 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 1.6E-9 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SDY_1266 579511a4bcb3ed5ca93c8024cdb3f489 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 3.0E-14 T 21-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SDY_1266 579511a4bcb3ed5ca93c8024cdb3f489 366 PANTHER PTHR37958 5 366 3.3E-131 T 21-04-2016 SDY_1266 579511a4bcb3ed5ca93c8024cdb3f489 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 1 365 1.2E-128 T 21-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 SDY_1266 579511a4bcb3ed5ca93c8024cdb3f489 366 PANTHER PTHR37958:SF1 5 366 3.3E-131 T 21-04-2016 SDY_0073 a3c7d7c85c0cfb18f99128e64f554509 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 11 103 1.0E-38 T 21-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 SDY_0073 a3c7d7c85c0cfb18f99128e64f554509 104 Gene3D G3DSA:2.30.30.110 1 104 1.5E-33 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_0073 a3c7d7c85c0cfb18f99128e64f554509 104 SUPERFAMILY SSF50118 1 104 2.29E-25 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_0073 a3c7d7c85c0cfb18f99128e64f554509 104 Pfam PF01845 CcdB protein 2 103 2.1E-29 T 21-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 Pfam PF00239 Resolvase, N terminal domain 3 135 1.4E-49 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 PANTHER PTHR30461 1 146 8.8E-52 T 21-04-2016 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 SMART SM00857 2 136 6.0E-64 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 Gene3D G3DSA:3.40.50.1390 1 119 9.7E-46 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 SUPERFAMILY SSF53041 1 136 1.96E-48 T 21-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SDY_2752 f089f73fa385e6f92e5c10199e41e4e4 146 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 21-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 SUPERFAMILY SSF55620 2 116 3.28E-36 T 21-04-2016 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 Gene3D G3DSA:3.30.1130.10 2 116 4.7E-43 T 21-04-2016 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 5 115 1.9E-27 T 21-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 PANTHER PTHR20941 2 116 1.1E-39 T 21-04-2016 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 Pfam PF02152 Dihydroneopterin aldolase 5 114 5.3E-32 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 TIGRFAM TIGR00526 folB_dom: FolB domain 2 119 5.7E-42 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_3241 50bfa642c9ac00ff0a60a13f03b2fc79 123 SMART SM00905 5 115 5.9E-46 T 21-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 263 59.205 T 21-04-2016 IPR023730 Transcriptional regulator NanR SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 SMART SM00345 36 95 2.3E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 PANTHER PTHR11751 121 139 2.5E-16 T 21-04-2016 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 PANTHER PTHR11751 33 102 2.5E-16 T 21-04-2016 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 Gene3D G3DSA:1.20.120.530 117 258 2.9E-24 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 9.5E-21 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 Pfam PF07729 FCD domain 125 246 1.9E-20 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 Gene3D G3DSA:1.10.10.10 29 102 2.8E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 SUPERFAMILY SSF46785 28 99 3.8E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 SMART SM00895 123 247 4.9E-17 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3401 f52419c7d80e4c995b9bf1817e1e364a 263 SUPERFAMILY SSF48008 120 252 1.31E-23 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3043 a4c23d26076794fa60d262ffc28d8875 156 SUPERFAMILY SSF54523 8 135 4.24E-7 T 21-04-2016 SDY_3043 a4c23d26076794fa60d262ffc28d8875 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3043 a4c23d26076794fa60d262ffc28d8875 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 7.2E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3043 a4c23d26076794fa60d262ffc28d8875 156 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 2.2E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00448 4 114 6.3E-38 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 PANTHER PTHR26402 4 238 4.1E-156 T 21-04-2016 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00072 Response regulator receiver domain 6 113 8.3E-27 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.4E-18 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00862 156 232 3.7E-15 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 PANTHER PTHR26402:SF586 4 238 4.1E-156 T 21-04-2016 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:1.10.10.10 135 233 1.7E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:3.40.50.2300 2 123 1.8E-35 T 21-04-2016 SDY_4662 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 21-04-2016 IPR011006 CheY-like superfamily SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.971 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 PIRSF PIRSF001456 3 359 1.8E-142 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 SUPERFAMILY SSF103263 4 353 2.62E-149 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.1E-140 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 Pfam PF01264 Chorismate synthase 10 345 1.7E-143 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 Gene3D G3DSA:3.60.150.10 9 352 1.2E-161 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 PANTHER PTHR21085 2 351 3.1E-225 T 21-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_2528 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 21-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_0979 01f51658daa54b6fce36cc556c007d30 75 Pfam PF13993 YccJ-like protein 9 75 2.2E-38 T 21-04-2016 IPR025600 YccJ-like protein SDY_3784 73e8edf538b7ba85a9c5fab6afe2dd49 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 5.5E-90 T 21-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SDY_3784 73e8edf538b7ba85a9c5fab6afe2dd49 359 PANTHER PTHR30505 1 359 2.6E-163 T 21-04-2016 SDY_3784 73e8edf538b7ba85a9c5fab6afe2dd49 359 PANTHER PTHR30505:SF1 1 359 2.6E-163 T 21-04-2016 SDY_0820 0575bc4ed1ef3b1d66033fba0a36a00c 301 Pfam PF00665 Integrase core domain 124 243 1.9E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0820 0575bc4ed1ef3b1d66033fba0a36a00c 301 SUPERFAMILY SSF53098 125 291 5.31E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0820 0575bc4ed1ef3b1d66033fba0a36a00c 301 Pfam PF13276 HTH-like domain 62 104 5.7E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0820 0575bc4ed1ef3b1d66033fba0a36a00c 301 Gene3D G3DSA:3.30.420.10 120 282 5.1E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0350 0575bc4ed1ef3b1d66033fba0a36a00c 301 Pfam PF00665 Integrase core domain 124 243 1.9E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0350 0575bc4ed1ef3b1d66033fba0a36a00c 301 SUPERFAMILY SSF53098 125 291 5.31E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0350 0575bc4ed1ef3b1d66033fba0a36a00c 301 Pfam PF13276 HTH-like domain 62 104 5.7E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_0350 0575bc4ed1ef3b1d66033fba0a36a00c 301 Gene3D G3DSA:3.30.420.10 120 282 5.1E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 PANTHER PTHR30598:SF4 1 224 5.4E-135 T 21-04-2016 SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 1.1E-79 T 21-04-2016 IPR023234 NarG-like domain SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 Gene3D G3DSA:1.20.950.20 2 216 2.6E-71 T 21-04-2016 SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 SUPERFAMILY SSF103501 1 224 9.02E-71 T 21-04-2016 IPR023234 NarG-like domain SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 PANTHER PTHR30598 1 224 5.4E-135 T 21-04-2016 SDY_1282 9615e461f0c67d92d038288407cb8b6c 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 5.9E-128 T 21-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 SDY_3742 951984a24105ceca351709a149fd5e19 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.446 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3742 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF54736 50 121 3.49E-25 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SDY_3742 951984a24105ceca351709a149fd5e19 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.4E-48 T 21-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3742 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF48300 3 57 5.62E-16 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3742 951984a24105ceca351709a149fd5e19 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.6E-15 T 21-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3742 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-22 T 21-04-2016 SDY_3742 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:3.30.1390.10 51 121 5.7E-34 T 21-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SDY_3742 951984a24105ceca351709a149fd5e19 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 100 4.0E-17 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SDY_3742 951984a24105ceca351709a149fd5e19 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.0E-31 T 21-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 7.1E-109 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 6.3E-117 T 21-04-2016 IPR028053 Membrane insertase YidC, N-terminal SDY_4188 bd1281e729128d467db6c02bf7373997 548 PANTHER PTHR12428:SF14 165 547 5.1E-154 T 21-04-2016 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 PANTHER PTHR12428 165 547 5.1E-154 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 Pfam PF14849 YidC periplasmic domain 61 343 4.4E-88 T 21-04-2016 IPR028053 Membrane insertase YidC, N-terminal SDY_4188 bd1281e729128d467db6c02bf7373997 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 4.8E-69 T 21-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SDY_4188 bd1281e729128d467db6c02bf7373997 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.931 T 21-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SDY_4188 bd1281e729128d467db6c02bf7373997 548 Pfam PF02096 60Kd inner membrane protein 354 533 1.3E-60 T 21-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.2E-32 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-33 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-33 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-33 T 21-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 PANTHER PTHR33162:SF4 2 143 6.4E-71 T 21-04-2016 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 19.176 T 21-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 PANTHER PTHR33162 2 143 6.4E-71 T 21-04-2016 SDY_3906 dffbef8ea4e1fae1df0a1cebd449dd4e 171 Gene3D G3DSA:1.20.120.290 56 98 9.1E-4 T 21-04-2016 IPR023222 PsbQ-like domain SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 PANTHER PTHR30252:SF3 434 720 0.0 T 21-04-2016 SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 PANTHER PTHR30252:SF3 13 408 0.0 T 21-04-2016 SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 492 619 1.6E-34 T 21-04-2016 IPR025299 CstA, C-terminal domain SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 PANTHER PTHR30252 434 720 0.0 T 21-04-2016 SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 PANTHER PTHR30252 13 408 0.0 T 21-04-2016 SDY_4607 eb16b7c26792214dccd44579e6ae423a 721 Pfam PF02554 Carbon starvation protein CstA 39 410 2.4E-162 T 21-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SDY_1554 71491fe993e0efa286b90ebe541bf37c 109 PANTHER PTHR30561 5 109 3.9E-68 T 21-04-2016 SDY_1554 71491fe993e0efa286b90ebe541bf37c 109 PANTHER PTHR30561:SF6 5 109 3.9E-68 T 21-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 SDY_1554 71491fe993e0efa286b90ebe541bf37c 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.45 T 21-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 SDY_1554 71491fe993e0efa286b90ebe541bf37c 109 SUPERFAMILY SSF103481 12 108 3.79E-17 T 21-04-2016 SDY_1554 71491fe993e0efa286b90ebe541bf37c 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 2.2E-28 T 21-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 Pfam PF00924 Mechanosensitive ion channel 72 268 2.3E-58 T 21-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 SUPERFAMILY SSF50182 114 179 6.87E-17 T 21-04-2016 IPR010920 LSM domain SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 Gene3D G3DSA:2.30.30.60 129 178 6.0E-20 T 21-04-2016 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 Gene3D G3DSA:3.30.70.100 182 266 8.7E-32 T 21-04-2016 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 SUPERFAMILY SSF82861 28 112 7.98E-18 T 21-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 PANTHER PTHR30221:SF7 16 285 4.6E-114 T 21-04-2016 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 PANTHER PTHR30221 16 285 4.6E-114 T 21-04-2016 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 SUPERFAMILY SSF82689 181 278 7.45E-33 T 21-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 21-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SDY_3158 aa1d53928e31ddb32b356792ec7ea5fd 286 Pfam PF05552 Conserved TM helix 16 64 8.6E-13 T 21-04-2016 IPR008910 Conserved TM helix SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 SUPERFAMILY SSF81343 2 131 9.16E-59 T 21-04-2016 SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 30.487 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 129 6.0E-56 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.9E-56 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 Gene3D G3DSA:1.20.1300.10 3 130 3.2E-59 T 21-04-2016 SDY_4396 03eb73393ff7f1c02219e3ff198a8182 131 PIRSF PIRSF000180 2 130 5.1E-63 T 21-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 SUPERFAMILY SSF75169 1 119 4.32E-34 T 21-04-2016 IPR027396 DsrEFH-like SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 2.7E-45 T 21-04-2016 IPR017462 Sulphur relay, TusC/DsrF SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.4E-23 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 Gene3D G3DSA:3.40.1260.10 1 119 1.6E-47 T 21-04-2016 IPR027396 DsrEFH-like SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 PANTHER PTHR38780:SF1 1 119 4.0E-59 T 21-04-2016 SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.563 T 21-04-2016 IPR017462 Sulphur relay, TusC/DsrF SDY_3505 2c5f92d1ae2b881cc8ae06edd608bfac 119 PANTHER PTHR38780 1 119 4.0E-59 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 4.0E-59 T 21-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SDY_2157 0a1676ac54f04266978a679457394418 305 PANTHER PTHR30177 25 304 1.4E-148 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 Gene3D G3DSA:3.40.190.120 134 241 2.0E-27 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 SUPERFAMILY SSF53850 26 303 1.57E-58 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 Gene3D G3DSA:3.40.190.10 254 304 5.9E-56 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 Gene3D G3DSA:3.40.190.10 24 133 5.9E-56 T 21-04-2016 SDY_2157 0a1676ac54f04266978a679457394418 305 PANTHER PTHR30177:SF12 25 304 1.4E-148 T 21-04-2016 SDY_1509 197ed0ae48a62745580c28034cde75da 347 SUPERFAMILY SSF55326 7 161 5.38E-41 T 21-04-2016 SDY_1509 197ed0ae48a62745580c28034cde75da 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 1.8E-32 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_1509 197ed0ae48a62745580c28034cde75da 347 Gene3D G3DSA:3.90.650.10 176 344 3.5E-20 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_1509 197ed0ae48a62745580c28034cde75da 347 Gene3D G3DSA:3.30.1330.10 29 162 4.1E-32 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_1509 197ed0ae48a62745580c28034cde75da 347 SUPERFAMILY SSF56042 164 340 1.14E-50 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_1509 197ed0ae48a62745580c28034cde75da 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 5.7E-19 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_1509 197ed0ae48a62745580c28034cde75da 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.342 T 21-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SDY_1509 197ed0ae48a62745580c28034cde75da 347 PANTHER PTHR10256 1 346 1.0E-165 T 21-04-2016 SDY_1509 197ed0ae48a62745580c28034cde75da 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 1.9E-134 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SDY_1509 197ed0ae48a62745580c28034cde75da 347 PIRSF PIRSF036407 1 346 4.8E-117 T 21-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 5.0E-67 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 SUPERFAMILY SSF55068 5 208 9.03E-84 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 Gene3D G3DSA:3.30.1060.10 7 199 4.1E-80 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 PANTHER PTHR10173:SF6 1 201 4.8E-110 T 21-04-2016 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 PANTHER PTHR10173 1 201 4.8E-110 T 21-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 1.6E-71 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SDY_4456 90b49a96b5de9c7e17d004bdcd01023e 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.424 T 21-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:1.10.10.10 13 64 1.0E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 SMART SM00344 12 121 3.5E-55 T 21-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 21-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 PANTHER PTHR30154:SF0 4 162 3.2E-107 T 21-04-2016 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:3.30.70.920 65 161 2.3E-33 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.7E-21 T 21-04-2016 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 PANTHER PTHR30154 4 162 3.2E-107 T 21-04-2016 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.1E-24 T 21-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_2372 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 21-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SDY_3785 41c745e1144737d3a54930399d749fd8 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.9E-21 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3785 41c745e1144737d3a54930399d749fd8 106 Gene3D G3DSA:3.40.50.2300 2 101 1.3E-41 T 21-04-2016 SDY_3785 41c745e1144737d3a54930399d749fd8 106 SUPERFAMILY SSF52794 3 101 1.71E-35 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3785 41c745e1144737d3a54930399d749fd8 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 3.3E-41 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SDY_3785 41c745e1144737d3a54930399d749fd8 106 PANTHER PTHR30505 1 102 6.7E-42 T 21-04-2016 SDY_2050 5c96612253d5137046f0005b72e1e632 265 Pfam PF01026 TatD related DNase 4 255 1.3E-76 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_2050 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SDY_2050 5c96612253d5137046f0005b72e1e632 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.4E-97 T 21-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SDY_2050 5c96612253d5137046f0005b72e1e632 265 Gene3D G3DSA:3.20.20.140 2 257 2.5E-86 T 21-04-2016 SDY_2050 5c96612253d5137046f0005b72e1e632 265 PIRSF PIRSF005902 1 259 2.4E-75 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_2050 5c96612253d5137046f0005b72e1e632 265 PANTHER PTHR10060:SF20 1 258 6.7E-139 T 21-04-2016 SDY_2050 5c96612253d5137046f0005b72e1e632 265 SUPERFAMILY SSF51556 1 259 8.52E-89 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_2050 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SDY_2050 5c96612253d5137046f0005b72e1e632 265 PANTHER PTHR10060 1 258 6.7E-139 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 1.3E-97 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 Gene3D G3DSA:3.40.50.1860 22 191 7.1E-49 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 21-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 SUPERFAMILY SSF53681 127 279 4.58E-33 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 PANTHER PTHR21198:SF2 15 283 3.2E-115 T 21-04-2016 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 SUPERFAMILY SSF53681 24 125 9.15E-31 T 21-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 21-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.682 T 21-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 PANTHER PTHR21198 15 283 3.2E-115 T 21-04-2016 SDY_3761 822ad3e5bb8da2411186bc50cf360c70 285 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 2.4E-25 T 21-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SDY_3160 a8ef2580fbba5dc084c0e29260d0cdb6 246 PANTHER PTHR34387 5 239 2.4E-68 T 21-04-2016 SDY_3160 a8ef2580fbba5dc084c0e29260d0cdb6 246 Pfam PF04402 Protein of unknown function (DUF541) 30 230 1.2E-44 T 21-04-2016 IPR007497 Protein of unknown function DUF541 SDY_3160 a8ef2580fbba5dc084c0e29260d0cdb6 246 PANTHER PTHR34387:SF1 5 239 2.4E-68 T 21-04-2016 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.8E-7 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 Gene3D G3DSA:1.10.10.60 1 57 5.1E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 Pfam PF12833 Helix-turn-helix domain 27 106 6.0E-24 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 Gene3D G3DSA:1.10.10.60 58 106 1.9E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 SUPERFAMILY SSF46689 4 56 1.25E-10 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 SUPERFAMILY SSF46689 57 106 1.12E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 PANTHER PTHR11019 3 107 8.2E-86 T 21-04-2016 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 SMART SM00342 21 104 3.9E-34 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_4505 b201829c9ca33bade15ffe0eeec7c189 107 PANTHER PTHR11019:SF133 3 107 8.2E-86 T 21-04-2016 SDY_2162 814ad64738f242701b058c31934ff958 243 SMART SM00422 4 73 5.2E-29 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_2162 814ad64738f242701b058c31934ff958 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.3E-18 T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_2162 814ad64738f242701b058c31934ff958 243 PANTHER PTHR30204 1 243 3.7E-131 T 21-04-2016 SDY_2162 814ad64738f242701b058c31934ff958 243 SUPERFAMILY SSF46955 3 90 1.92E-19 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_2162 814ad64738f242701b058c31934ff958 243 Gene3D G3DSA:1.10.1660.10 4 88 1.5E-19 T 21-04-2016 SDY_2162 814ad64738f242701b058c31934ff958 243 PANTHER PTHR30204:SF19 1 243 3.7E-131 T 21-04-2016 SDY_2162 814ad64738f242701b058c31934ff958 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 21-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.0E-128 T 21-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 PANTHER PTHR12778 1 404 1.9E-126 T 21-04-2016 SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 Gene3D G3DSA:1.20.1250.20 17 199 2.4E-16 T 21-04-2016 SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 Gene3D G3DSA:1.20.1250.20 223 405 3.1E-12 T 21-04-2016 SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 SUPERFAMILY SSF103473 10 403 1.57E-42 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0300 73c4856c98453eeb5d3a2ef99cca894d 491 Pfam PF07690 Major Facilitator Superfamily 17 366 1.9E-31 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 PANTHER PTHR16301 1 203 2.2E-62 T 21-04-2016 IPR023582 Impact family SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 Pfam PF01205 Uncharacterized protein family UPF0029 19 126 2.2E-26 T 21-04-2016 IPR001498 Impact, N-terminal SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 205 1.5E-88 T 21-04-2016 IPR015796 Impact family, bacterial/archaeal SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 Gene3D G3DSA:3.30.230.30 7 132 3.1E-43 T 21-04-2016 IPR001498 Impact, N-terminal SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 Gene3D G3DSA:3.30.70.240 136 205 7.3E-33 T 21-04-2016 IPR000640 Translation elongation factor EFG, V domain SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 Pfam PF09186 Domain of unknown function (DUF1949) 142 196 8.2E-15 T 21-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 SUPERFAMILY SSF54980 137 204 1.06E-18 T 21-04-2016 IPR009022 Elongation factor G, III-V domain SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 SUPERFAMILY SSF54211 2 132 1.59E-42 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3897 6cba637a76378196c581b6a6f3bd126a 205 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 21-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SDY_3569 14cfe6a3d3e68d767bd41c320f32a9b9 499 PANTHER PTHR11101:SF59 2 499 0.0 T 21-04-2016 SDY_3569 14cfe6a3d3e68d767bd41c320f32a9b9 499 PANTHER PTHR11101 2 499 0.0 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SDY_3569 14cfe6a3d3e68d767bd41c320f32a9b9 499 Pfam PF01384 Phosphate transporter family 30 488 1.4E-85 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SDY_3896 26c37380d6b7a5bc969d70bec5d24d67 483 PANTHER PTHR32024:SF2 1 483 6.0E-284 T 21-04-2016 SDY_3896 26c37380d6b7a5bc969d70bec5d24d67 483 PANTHER PTHR32024 1 483 6.0E-284 T 21-04-2016 SDY_3896 26c37380d6b7a5bc969d70bec5d24d67 483 Pfam PF02386 Cation transport protein 37 477 4.9E-93 T 21-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SDY_3896 26c37380d6b7a5bc969d70bec5d24d67 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 5.7E-129 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SDY_3896 26c37380d6b7a5bc969d70bec5d24d67 483 PIRSF PIRSF006247 1 483 2.2E-185 T 21-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SDY_3117 49743033b450e79f419cba59d159bf19 378 PANTHER PTHR13932 5 378 4.1E-232 T 21-04-2016 SDY_3117 49743033b450e79f419cba59d159bf19 378 PANTHER PTHR13932:SF7 5 378 4.1E-232 T 21-04-2016 SDY_3117 49743033b450e79f419cba59d159bf19 378 SMART SM00729 6 223 1.1E-55 T 21-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SDY_3117 49743033b450e79f419cba59d159bf19 378 Gene3D G3DSA:3.80.30.20 7 239 1.1E-29 T 21-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SDY_3117 49743033b450e79f419cba59d159bf19 378 SUPERFAMILY SSF102114 5 376 5.49E-108 T 21-04-2016 SDY_3117 49743033b450e79f419cba59d159bf19 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.6E-142 T 21-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SDY_3117 49743033b450e79f419cba59d159bf19 378 Pfam PF06969 HemN C-terminal domain 304 364 4.8E-7 T 21-04-2016 IPR010723 HemN, C-terminal SDY_3117 49743033b450e79f419cba59d159bf19 378 Pfam PF04055 Radical SAM superfamily 11 177 3.8E-20 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_2731 38783f1f4f7cd8f5aba4b58b424a52b1 426 SUPERFAMILY SSF63520 231 333 1.57E-14 T 21-04-2016 IPR011608 PRD domain GO:0006355 SDY_2731 38783f1f4f7cd8f5aba4b58b424a52b1 426 Pfam PF00874 PRD domain 240 328 5.2E-10 T 21-04-2016 IPR011608 PRD domain GO:0006355 SDY_2731 38783f1f4f7cd8f5aba4b58b424a52b1 426 Pfam PF00874 PRD domain 131 216 9.5E-10 T 21-04-2016 IPR011608 PRD domain GO:0006355 SDY_2731 38783f1f4f7cd8f5aba4b58b424a52b1 426 Gene3D G3DSA:1.10.1790.10 231 332 1.4E-14 T 21-04-2016 IPR011608 PRD domain GO:0006355 SDY_4713 ddc019d9f234949e7048780ae8e04edb 90 PANTHER PTHR33293:SF2 1 89 5.3E-20 T 21-04-2016 SDY_4713 ddc019d9f234949e7048780ae8e04edb 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4713 ddc019d9f234949e7048780ae8e04edb 90 PANTHER PTHR33293 1 89 5.3E-20 T 21-04-2016 SDY_4713 ddc019d9f234949e7048780ae8e04edb 90 Pfam PF12759 InsA C-terminal domain 42 87 1.4E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732 1 139 1.8E-216 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732 157 346 1.8E-216 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.4E-72 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.9E-8 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.9E-8 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 Gene3D G3DSA:3.20.20.100 1 343 2.0E-105 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732:SF112 1 139 1.8E-216 T 21-04-2016 SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732:SF112 157 346 1.8E-216 T 21-04-2016 SDY_3051 02c62f307fe2cb6722c924c7482b7176 346 SUPERFAMILY SSF51430 1 344 8.12E-106 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 SUPERFAMILY SSF53850 1 257 5.33E-66 T 21-04-2016 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 21-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 SMART SM00062 27 256 2.1E-73 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 PANTHER PTHR18966 24 253 4.7E-167 T 21-04-2016 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 Gene3D G3DSA:3.40.190.10 116 212 2.0E-31 T 21-04-2016 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 3.6E-102 T 21-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.2E-63 T 21-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 Gene3D G3DSA:3.40.190.10 26 113 2.3E-43 T 21-04-2016 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 Gene3D G3DSA:3.40.190.10 215 257 2.3E-43 T 21-04-2016 SDY_2508 abde1e5a43275a1325edfbf6ae8b79da 260 PANTHER PTHR18966:SF237 24 253 4.7E-167 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 PANTHER PTHR34875 1 190 2.1E-92 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF01842 ACT domain 97 166 3.9E-7 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF13740 ACT domain 7 82 5.0E-26 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 91 179 1.53E-17 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 92 188 4.2E-46 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 6 88 9.99E-17 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 PIRSF PIRSF028103 5 180 1.2E-72 T 21-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 6 84 2.2E-32 T 21-04-2016 SDY_2668 c431ab61e0ddc8579810ce6d355caa2d 190 PANTHER PTHR34875:SF3 1 190 2.1E-92 T 21-04-2016 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 PANTHER PTHR30191:SF4 1 765 0.0 T 21-04-2016 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 21-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 Gene3D G3DSA:3.20.70.20 1 764 2.4E-257 T 21-04-2016 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 Pfam PF01228 Glycine radical 646 747 2.1E-27 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 SUPERFAMILY SSF51998 1 764 2.62E-222 T 21-04-2016 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 3.0E-204 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_3786 f27d7707ce509fcfeb3f307a852bbf2a 765 PANTHER PTHR30191 1 765 0.0 T 21-04-2016 SDY_4633 5261c32f3273c22d839f0733012895dc 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 2.0E-17 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4633 5261c32f3273c22d839f0733012895dc 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 2.0E-75 T 21-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 SDY_4633 5261c32f3273c22d839f0733012895dc 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 194 7.4E-21 T 21-04-2016 IPR023214 HAD-like domain SDY_4633 5261c32f3273c22d839f0733012895dc 225 PANTHER PTHR12725:SF57 1 222 1.4E-57 T 21-04-2016 SDY_4633 5261c32f3273c22d839f0733012895dc 225 SUPERFAMILY SSF56784 3 222 2.32E-47 T 21-04-2016 IPR023214 HAD-like domain SDY_4633 5261c32f3273c22d839f0733012895dc 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 195 3.3E-9 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_4633 5261c32f3273c22d839f0733012895dc 225 Gene3D G3DSA:3.40.50.1000 90 223 1.6E-44 T 21-04-2016 IPR023214 HAD-like domain SDY_4633 5261c32f3273c22d839f0733012895dc 225 Gene3D G3DSA:1.10.150.240 15 89 6.0E-19 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_4633 5261c32f3273c22d839f0733012895dc 225 PANTHER PTHR12725 1 222 1.4E-57 T 21-04-2016 SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 SUPERFAMILY SSF82649 3 146 5.58E-44 T 21-04-2016 SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 Pfam PF02657 Fe-S metabolism associated domain 23 140 2.4E-38 T 21-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 Gene3D G3DSA:3.90.1010.10 4 146 8.1E-49 T 21-04-2016 SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 PANTHER PTHR12735 1 147 5.6E-55 T 21-04-2016 SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 144 8.3E-73 T 21-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE SDY_3029 487987be5f9e0374d8f1df4af8f54115 147 PANTHER PTHR12735:SF11 1 147 5.6E-55 T 21-04-2016 SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 Gene3D G3DSA:3.40.50.300 198 380 7.8E-39 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 SUPERFAMILY SSF52540 214 440 9.0E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 SUPERFAMILY SSF52540 503 601 9.0E-42 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 1.5E-219 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 SMART SM00487 195 391 1.6E-20 T 21-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 Gene3D G3DSA:3.40.50.300 456 632 2.8E-28 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 6.2E-16 T 21-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 PANTHER PTHR30580 1 732 3.7E-295 T 21-04-2016 SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 26.212 T 21-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.6E-5 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_3802 91c71ffa381be6295d296cc185d5fdd4 732 SMART SM00490 492 589 3.6E-10 T 21-04-2016 IPR001650 Helicase, C-terminal SDY_2143 925db9b4ad38753374cef75e12d06554 239 PIRSF PIRSF005011 1 239 4.5E-157 T 21-04-2016 IPR023604 Uncharacterised protein family SanA SDY_2143 925db9b4ad38753374cef75e12d06554 239 PANTHER PTHR30336:SF0 2 239 1.8E-126 T 21-04-2016 SDY_2143 925db9b4ad38753374cef75e12d06554 239 PANTHER PTHR30336 2 239 1.8E-126 T 21-04-2016 SDY_2143 925db9b4ad38753374cef75e12d06554 239 Gene3D G3DSA:3.40.50.620 39 170 2.8E-8 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_2143 925db9b4ad38753374cef75e12d06554 239 Pfam PF02698 DUF218 domain 48 170 9.9E-18 T 21-04-2016 IPR003848 Domain of unknown function DUF218 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 PANTHER PTHR13734 22 334 5.8E-140 T 21-04-2016 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 PANTHER PTHR13734:SF47 22 334 5.8E-140 T 21-04-2016 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 288 1.6E-20 T 21-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 467 38.819 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 SUPERFAMILY SSF81301 41 196 2.29E-40 T 21-04-2016 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 SUPERFAMILY SSF81891 198 436 2.35E-52 T 21-04-2016 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Pfam PF01743 Poly A polymerase head domain 69 200 1.1E-39 T 21-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Gene3D G3DSA:3.30.460.10 51 199 6.6E-51 T 21-04-2016 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 465 1.3E-157 T 21-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 463 1.6E-40 T 21-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain SDY_0159 b8eb31a61f36ba0409b8a9f8aab985e7 472 Gene3D G3DSA:1.10.3090.10 200 434 7.8E-52 T 21-04-2016 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 PANTHER PTHR21581:SF8 9 306 4.3E-195 T 21-04-2016 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 SUPERFAMILY SSF56601 6 280 1.04E-61 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 264 2.8E-89 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 PANTHER PTHR21581 9 306 4.3E-195 T 21-04-2016 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 Gene3D G3DSA:3.40.710.10 21 280 1.8E-65 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 1.9E-13 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 1.9E-13 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2154 cd1b4a7a95d01231f15e0d49778abb57 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 1.9E-13 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2226 1ad2b22a3c0056e0825bd9d00be41e2d 454 PANTHER PTHR11785:SF350 9 452 0.0 T 21-04-2016 SDY_2226 1ad2b22a3c0056e0825bd9d00be41e2d 454 PIRSF PIRSF006060 3 447 2.2E-71 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2226 1ad2b22a3c0056e0825bd9d00be41e2d 454 Pfam PF13520 Amino acid permease 59 410 8.1E-35 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2226 1ad2b22a3c0056e0825bd9d00be41e2d 454 PANTHER PTHR11785 9 452 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 21-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 PANTHER PTHR10772 1 96 6.9E-39 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 Gene3D G3DSA:2.30.33.40 1 96 1.2E-32 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 SMART SM00883 2 95 4.3E-50 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.8E-30 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_4448 14aed608b903e87469e861e7f4f44d91 97 SUPERFAMILY SSF50129 1 96 1.29E-31 T 21-04-2016 IPR011032 GroES-like SDY_4448 14aed608b903e87469e861e7f4f44d91 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.098 T 21-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 Gene3D G3DSA:3.40.30.10 4 183 6.7E-59 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 SUPERFAMILY SSF52833 1 186 7.82E-54 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 PIRSF PIRSF000239 1 187 3.6E-50 T 21-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 PANTHER PTHR10681:SF121 1 187 3.1E-93 T 21-04-2016 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 PANTHER PTHR10681 1 187 3.1E-93 T 21-04-2016 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.9E-103 T 21-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 Pfam PF00578 AhpC/TSA family 10 133 9.5E-33 T 21-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SDY_0540 ac5a13ea233ea867a0aab0070e0febd0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 21-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SDY_1320 a2fa87b672813cfc3fe7dca8e2a4bbd0 212 Gene3D G3DSA:2.40.160.20 22 212 1.3E-72 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_1320 a2fa87b672813cfc3fe7dca8e2a4bbd0 212 Pfam PF03922 OmpW family 23 212 1.8E-72 T 21-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 SDY_1320 a2fa87b672813cfc3fe7dca8e2a4bbd0 212 PANTHER PTHR36920:SF1 1 212 2.9E-95 T 21-04-2016 SDY_1320 a2fa87b672813cfc3fe7dca8e2a4bbd0 212 PANTHER PTHR36920 1 212 2.9E-95 T 21-04-2016 SDY_1320 a2fa87b672813cfc3fe7dca8e2a4bbd0 212 SUPERFAMILY SSF56925 28 212 6.28E-26 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 PANTHER PTHR30465:SF21 1 308 2.6E-189 T 21-04-2016 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 314 1.1E-169 T 21-04-2016 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 Gene3D G3DSA:1.10.3720.10 89 304 3.0E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 PANTHER PTHR30465 1 308 2.6E-189 T 21-04-2016 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 2.4E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_3632 49e470c6ff933c79648c3b2b693f7024 314 SUPERFAMILY SSF161098 94 308 1.31E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1698 78b43d31e6dd77d0d1c54fe8e4a64dd4 212 Pfam PF01810 LysE type translocator 18 209 7.7E-59 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_1698 78b43d31e6dd77d0d1c54fe8e4a64dd4 212 PANTHER PTHR30086 5 208 9.2E-143 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_1698 78b43d31e6dd77d0d1c54fe8e4a64dd4 212 PIRSF PIRSF006324 4 212 1.6E-64 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_1698 78b43d31e6dd77d0d1c54fe8e4a64dd4 212 PANTHER PTHR30086:SF15 5 208 9.2E-143 T 21-04-2016 SDY_2629 e1aeb7ad5a91418471e42fedcf961968 308 SUPERFAMILY SSF54909 10 305 3.04E-90 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_2629 e1aeb7ad5a91418471e42fedcf961968 308 Pfam PF04261 Dyp-type peroxidase family 14 304 7.9E-98 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SDY_2629 e1aeb7ad5a91418471e42fedcf961968 308 PANTHER PTHR30521:SF0 1 308 9.3E-138 T 21-04-2016 SDY_2629 e1aeb7ad5a91418471e42fedcf961968 308 PANTHER PTHR30521 1 308 9.3E-138 T 21-04-2016 SDY_2629 e1aeb7ad5a91418471e42fedcf961968 308 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 14 305 1.4E-90 T 21-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- SDY_2004 7e91cff17224b30cc38389e8fe3912ea 211 Pfam PF13276 HTH-like domain 27 82 1.2E-10 T 21-04-2016 IPR025948 HTH-like domain SDY_2004 7e91cff17224b30cc38389e8fe3912ea 211 PANTHER PTHR32552 1 211 3.9E-61 T 21-04-2016 SDY_2004 7e91cff17224b30cc38389e8fe3912ea 211 Pfam PF00665 Integrase core domain 107 209 2.8E-21 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2004 7e91cff17224b30cc38389e8fe3912ea 211 SUPERFAMILY SSF53098 100 210 2.85E-25 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2004 7e91cff17224b30cc38389e8fe3912ea 211 Gene3D G3DSA:3.30.420.10 101 209 2.2E-20 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 PANTHER PTHR12029:SF54 1 180 1.8E-112 T 21-04-2016 SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 SUPERFAMILY SSF75217 2 157 9.16E-31 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 226 4.2E-82 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 Gene3D G3DSA:3.40.1280.10 2 159 8.7E-28 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 3.1E-33 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 PANTHER PTHR12029 1 180 1.8E-112 T 21-04-2016 SDY_4664 94dd60887ec93c65287b25e06e56f7a5 228 PIRSF PIRSF004808 1 228 1.7E-64 T 21-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SDY_4320 5d27a1ae7bf6560d5bee0bfad31ef2dc 125 PANTHER PTHR33293 1 124 5.8E-42 T 21-04-2016 SDY_4320 5d27a1ae7bf6560d5bee0bfad31ef2dc 125 Pfam PF03400 IS1 transposase 1 125 2.4E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4339 5d27a1ae7bf6560d5bee0bfad31ef2dc 125 PANTHER PTHR33293 1 124 5.8E-42 T 21-04-2016 SDY_4339 5d27a1ae7bf6560d5bee0bfad31ef2dc 125 Pfam PF03400 IS1 transposase 1 125 2.4E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3073 ecdfe0cac71a42864e17762877fcb310 269 Pfam PF00248 Aldo/keto reductase family 31 258 2.7E-57 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3073 ecdfe0cac71a42864e17762877fcb310 269 PANTHER PTHR11732:SF191 13 267 7.3E-149 T 21-04-2016 SDY_3073 ecdfe0cac71a42864e17762877fcb310 269 SUPERFAMILY SSF51430 13 248 1.18E-67 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_3073 ecdfe0cac71a42864e17762877fcb310 269 PANTHER PTHR11732 13 267 7.3E-149 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_3073 ecdfe0cac71a42864e17762877fcb310 269 Gene3D G3DSA:3.20.20.100 12 249 9.0E-65 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0955 6f21d3ea5219fe526e94a4b0946b3ab3 30 Pfam PF08173 Membrane bound YbgT-like protein 1 25 3.9E-11 T 21-04-2016 IPR012994 Membrane bound YbgT-like SDY_0891 8baf3a1353e12df737a3354e1600675a 586 PANTHER PTHR10342:SF215 540 567 1.5E-172 T 21-04-2016 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 PANTHER PTHR10342:SF215 232 519 1.5E-172 T 21-04-2016 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 SUPERFAMILY SSF53649 257 556 2.22E-53 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.3E-106 T 21-04-2016 IPR024588 Inner membrane protein YejM, N-terminal SDY_0891 8baf3a1353e12df737a3354e1600675a 586 Pfam PF00884 Sulfatase 260 500 1.7E-32 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 Gene3D G3DSA:3.40.720.10 261 519 6.7E-32 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 PANTHER PTHR10342 540 567 1.5E-172 T 21-04-2016 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 PANTHER PTHR10342 232 519 1.5E-172 T 21-04-2016 SDY_0891 8baf3a1353e12df737a3354e1600675a 586 PIRSF PIRSF004950 6 586 1.1E-222 T 21-04-2016 IPR012159 Inner membrane protein YejM SDY_0610 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF46785 14 79 5.25E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0610 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964:SF128 306 403 1.7E-223 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964:SF128 64 289 1.7E-223 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 Pfam PF00480 ROK family 89 392 2.4E-102 T 21-04-2016 IPR000600 ROK family SDY_0610 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964 306 403 1.7E-223 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964 64 289 1.7E-223 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF53067 88 394 8.64E-56 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:1.10.10.10 14 79 2.9E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0610 958ba29334f789f470d07397b634d739 406 Pfam PF01047 MarR family 25 63 5.5E-7 T 21-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SDY_0610 958ba29334f789f470d07397b634d739 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 21-04-2016 IPR000600 ROK family SDY_0610 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 85 224 2.4E-34 T 21-04-2016 SDY_0610 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 225 376 1.0E-47 T 21-04-2016 SDY_1873 16d03f56b50018a0f98cb3b68a407b02 125 PANTHER PTHR35175:SF1 27 125 2.8E-55 T 21-04-2016 SDY_1873 16d03f56b50018a0f98cb3b68a407b02 125 Pfam PF06945 Protein of unknown function (DUF1289) 58 103 5.9E-19 T 21-04-2016 IPR010710 Protein of unknown function DUF1289 SDY_1873 16d03f56b50018a0f98cb3b68a407b02 125 PANTHER PTHR35175 27 125 2.8E-55 T 21-04-2016 SDY_3837 00a82f36f048229bc18414466d4cfe5b 328 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 319 41.367 T 21-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 SDY_3837 00a82f36f048229bc18414466d4cfe5b 328 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 315 1.5E-183 T 21-04-2016 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 SDY_3837 00a82f36f048229bc18414466d4cfe5b 328 Pfam PF03812 2-keto-3-deoxygluconate permease 3 313 1.8E-114 T 21-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 SDY_3837 00a82f36f048229bc18414466d4cfe5b 328 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 328 8.0E-137 T 21-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 21-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 PANTHER PTHR11999:SF94 40 461 1.8E-200 T 21-04-2016 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 3.5E-114 T 21-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 SUPERFAMILY SSF53383 6 451 7.48E-133 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 8.4E-209 T 21-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 PANTHER PTHR11999 40 461 1.8E-200 T 21-04-2016 SDY_1615 cb942be6c855d1ab5d369704902bcc74 466 Gene3D G3DSA:3.40.640.10 75 321 2.0E-24 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 Gene3D G3DSA:3.40.50.2300 156 329 4.5E-36 T 21-04-2016 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 PANTHER PTHR30146 1 334 9.9E-231 T 21-04-2016 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 Gene3D G3DSA:3.40.50.2300 63 152 6.8E-29 T 21-04-2016 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 2.3E-14 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 SMART SM00354 1 73 7.4E-32 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 SUPERFAMILY SSF53822 60 314 2.94E-42 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 PANTHER PTHR30146:SF25 1 334 9.9E-231 T 21-04-2016 SDY_0110 0f04607af3da0d7354a76325ce4c3af6 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.1E-155 T 21-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 63 4.7E-5 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 71 94 4.7E-5 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 SUPERFAMILY SSF48498 118 232 1.75E-26 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 51 96 2.3E-15 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 SUPERFAMILY SSF46689 37 109 1.28E-17 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 PANTHER PTHR30055 36 235 5.3E-97 T 21-04-2016 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 Gene3D G3DSA:1.10.10.60 38 104 4.9E-25 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 PANTHER PTHR30055:SF34 36 235 5.3E-97 T 21-04-2016 SDY_2039 ca84a6c04cc77478b492a43fd2ca22ac 236 Gene3D G3DSA:1.10.357.10 110 235 4.0E-42 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 PANTHER PTHR11358 10 301 9.3E-110 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 PANTHER PTHR11358:SF26 10 301 9.3E-110 T 21-04-2016 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.587 T 21-04-2016 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 21-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 Pfam PF00491 Arginase family 34 297 7.7E-86 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 SUPERFAMILY SSF52768 13 301 2.88E-91 T 21-04-2016 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 Gene3D G3DSA:3.40.800.10 11 303 2.6E-97 T 21-04-2016 IPR023696 Ureohydrolase domain SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 PIRSF PIRSF036979 12 304 1.1E-101 T 21-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SDY_3139 7cd3de0cf7c358f9c2697ea279884b6c 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 3.9E-119 T 21-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 Pfam PF00593 TonB dependent receptor 493 728 5.9E-31 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 SUPERFAMILY SSF56935 33 729 6.28E-121 T 21-04-2016 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 PANTHER PTHR32552:SF37 67 729 0.0 T 21-04-2016 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 PANTHER PTHR32552:SF37 8 41 0.0 T 21-04-2016 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 729 2.3E-178 T 21-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 175 1.3E-13 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_2048 c07d5622040b940f094619a1160c7c7b 729 PANTHER PTHR32552 67 729 0.0 T 21-04-2016 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 PANTHER PTHR32552 8 41 0.0 T 21-04-2016 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 Gene3D G3DSA:2.170.130.10 57 183 4.3E-32 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_2048 c07d5622040b940f094619a1160c7c7b 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_2048 c07d5622040b940f094619a1160c7c7b 729 Gene3D G3DSA:2.40.170.20 192 729 3.8E-134 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_3725 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 9.8E-9 T 21-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site SDY_3725 a4f3e32edffa7958dc01944ed07694eb 231 PIRSF PIRSF006993 1 231 3.1E-117 T 21-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 SDY_3725 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 5.8E-69 T 21-04-2016 IPR010858 Protein of unknown function DUF1481 SDY_1819 b20f9fa6b0015e4f2125d104fd59a94d 178 Pfam PF14002 YniB-like protein 15 177 2.5E-77 T 21-04-2016 IPR025229 YniB-like protein SDY_1819 b20f9fa6b0015e4f2125d104fd59a94d 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 2.0E-100 T 21-04-2016 SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 PANTHER PTHR38444:SF2 3 72 3.3E-57 T 21-04-2016 SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 SUPERFAMILY SSF160582 3 70 3.14E-24 T 21-04-2016 SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 Pfam PF03621 MbtH-like protein 4 54 1.8E-21 T 21-04-2016 IPR005153 MbtH-like protein SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 Gene3D G3DSA:3.90.820.10 12 70 4.9E-23 T 21-04-2016 SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 PANTHER PTHR38444 3 72 3.3E-57 T 21-04-2016 SDY_0514 b95a81c380c8e26e11c0fe14137ea59a 72 SMART SM00923 5 55 2.0E-22 T 21-04-2016 IPR005153 MbtH-like protein SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 SUPERFAMILY SSF55811 1 125 6.36E-35 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 Pfam PF00293 NUDIX domain 5 125 1.8E-20 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 PRINTS PR00502 NUDIX hydrolase family signature 32 46 6.8E-6 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 PRINTS PR00502 NUDIX hydrolase family signature 46 61 6.8E-6 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 PANTHER PTHR22769:SF35 1 133 1.2E-38 T 21-04-2016 SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 Gene3D G3DSA:3.90.79.10 3 127 3.9E-33 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1516 0fdbf5080722a4093e93c90b55024ac0 135 PANTHER PTHR22769 1 133 1.2E-38 T 21-04-2016 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.2E-72 T 21-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 PANTHER PTHR19278 1 213 4.9E-149 T 21-04-2016 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 PANTHER PTHR19278:SF36 1 213 4.9E-149 T 21-04-2016 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 SUPERFAMILY SSF53271 2 209 3.04E-51 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.841 T 21-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 1.3E-11 T 21-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SDY_4073 1026a36825d1076d5fcef1e55fd3853f 213 Gene3D G3DSA:3.40.50.2020 7 212 1.1E-83 T 21-04-2016 IPR029057 Phosphoribosyltransferase-like SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 SUPERFAMILY SSF56935 31 101 2.56E-9 T 21-04-2016 SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 Gene3D G3DSA:2.170.130.10 33 104 5.9E-11 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 102 2.1E-6 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 PANTHER PTHR32552 5 101 8.5E-28 T 21-04-2016 SDY_0792 13c4eb8dd2a5bdaa12f7c38a38f69eb2 110 PANTHER PTHR32552:SF8 5 101 8.5E-28 T 21-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 SDY_3509 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Pfam PF04102 SlyX 6 72 4.7E-24 T 21-04-2016 IPR007236 SlyX SDY_3509 00bc8ba7a63c1b8b0b2f031a6c496b49 72 PANTHER PTHR36508 1 72 7.3E-28 T 21-04-2016 SDY_3509 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Gene3D G3DSA:1.20.5.300 2 52 2.3E-21 T 21-04-2016 SDY_3509 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.586 T 21-04-2016 IPR007236 SlyX SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 PANTHER PTHR24220:SF308 3 223 2.9E-56 T 21-04-2016 SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 PANTHER PTHR24220 3 223 2.9E-56 T 21-04-2016 SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 SUPERFAMILY SSF52540 2 223 1.3E-44 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 Gene3D G3DSA:3.40.50.300 1 223 2.2E-47 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 SMART SM00382 28 213 3.4E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3149 09fc1ad2f199408a88edc71ca72b012f 225 Pfam PF00005 ABC transporter 21 164 6.4E-26 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2034 3e975824f6ddf0c49d6ba1f2b08dfbe6 399 Pfam PF02687 FtsX-like permease family 270 392 4.5E-16 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SDY_2034 3e975824f6ddf0c49d6ba1f2b08dfbe6 399 PANTHER PTHR30489:SF8 1 399 1.5E-251 T 21-04-2016 SDY_2034 3e975824f6ddf0c49d6ba1f2b08dfbe6 399 PANTHER PTHR30489 1 399 1.5E-251 T 21-04-2016 SDY_2034 3e975824f6ddf0c49d6ba1f2b08dfbe6 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 1.6E-147 T 21-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SDY_2034 3e975824f6ddf0c49d6ba1f2b08dfbe6 399 Pfam PF12704 MacB-like periplasmic core domain 27 205 2.9E-13 T 21-04-2016 IPR025857 MacB-like periplasmic core domain SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 Gene3D G3DSA:3.20.20.450 34 251 4.8E-25 T 21-04-2016 IPR001633 EAL domain SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 SUPERFAMILY SSF141868 27 250 5.1E-30 T 21-04-2016 IPR001633 EAL domain SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 Pfam PF00563 EAL domain 28 243 4.4E-29 T 21-04-2016 IPR001633 EAL domain SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 PANTHER PTHR33121:SF6 2 256 5.2E-131 T 21-04-2016 SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 PANTHER PTHR33121 2 256 5.2E-131 T 21-04-2016 SDY_4545 761d3e62d0f0123a6b4f12269724f5ba 256 SMART SM00052 8 248 1.7E-55 T 21-04-2016 IPR001633 EAL domain SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 PANTHER PTHR22762:SF88 1 547 0.0 T 21-04-2016 SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 SUPERFAMILY SSF51445 263 541 4.71E-77 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 Gene3D G3DSA:3.20.20.70 385 445 1.7E-12 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 Gene3D G3DSA:3.20.20.70 275 350 1.7E-12 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 Pfam PF01055 Glycosyl hydrolases family 31 240 543 3.5E-79 T 21-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 PANTHER PTHR22762 1 547 0.0 T 21-04-2016 SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 Pfam PF13802 Galactose mutarotase-like 159 218 5.5E-16 T 21-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain SDY_4575 fda21eb094fccd77abcb948e5c5321b5 547 SUPERFAMILY SSF74650 1 247 1.32E-67 T 21-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SDY_2152 923a1006e0ac152ecee664392b8a6173 204 PANTHER PTHR30353:SF8 13 201 1.8E-113 T 21-04-2016 SDY_2152 923a1006e0ac152ecee664392b8a6173 204 Pfam PF09335 SNARE associated Golgi protein 35 155 1.6E-16 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_2152 923a1006e0ac152ecee664392b8a6173 204 PANTHER PTHR30353 13 201 1.8E-113 T 21-04-2016 IPR032818 DedA family SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 Gene3D G3DSA:1.10.1060.10 108 236 2.0E-46 T 21-04-2016 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.0E-9 T 21-04-2016 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 Gene3D G3DSA:3.10.20.30 1 106 1.5E-36 T 21-04-2016 IPR012675 Beta-grasp domain SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 9.5E-93 T 21-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 SUPERFAMILY SSF46548 107 236 1.12E-39 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 4.7E-31 T 21-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 PANTHER PTHR11921 4 236 8.0E-133 T 21-04-2016 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 PANTHER PTHR11921:SF29 4 236 8.0E-133 T 21-04-2016 SDY_0662 b4a81fdcbd13a3997c12d4d15538db57 238 SUPERFAMILY SSF54292 1 106 4.01E-30 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2527 f13e29807c71eb685951bb3feee38d41 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 70.416 T 21-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 SDY_2527 f13e29807c71eb685951bb3feee38d41 274 SUPERFAMILY SSF55166 21 272 7.45E-103 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SDY_2527 f13e29807c71eb685951bb3feee38d41 274 Gene3D G3DSA:3.30.1380.10 21 272 4.3E-107 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SDY_2527 f13e29807c71eb685951bb3feee38d41 274 PIRSF PIRSF018455 1 274 2.3E-120 T 21-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 SDY_2527 f13e29807c71eb685951bb3feee38d41 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 4.0E-94 T 21-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 PANTHER PTHR30222:SF5 1 327 2.0E-86 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 1.9E-6 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 1.9E-6 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 1.9E-6 T 21-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 PANTHER PTHR30222 1 327 2.0E-86 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 Gene3D G3DSA:3.40.190.10 300 327 5.3E-29 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 Gene3D G3DSA:3.40.190.10 35 145 5.3E-29 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 SUPERFAMILY SSF53850 33 358 2.78E-55 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 Gene3D G3DSA:3.40.190.10 147 299 1.3E-28 T 21-04-2016 SDY_1734 35bf3fa1cb8fd1492b68135265f45f77 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 327 2.1E-25 T 21-04-2016 SDY_3092 92884862ae9b078fdf139ae5b24df2be 276 Gene3D G3DSA:2.30.42.10 205 273 7.8E-8 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_3092 92884862ae9b078fdf139ae5b24df2be 276 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 3 274 1.5E-41 T 21-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 SDY_3092 92884862ae9b078fdf139ae5b24df2be 276 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 213 239 - T 21-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 SDY_3092 92884862ae9b078fdf139ae5b24df2be 276 Pfam PF11356 Type II secretion system protein C 3 142 2.1E-28 T 21-04-2016 IPR024961 Type II secretion system protein C, N-terminal SDY_3092 92884862ae9b078fdf139ae5b24df2be 276 SUPERFAMILY SSF50156 180 274 6.48E-14 T 21-04-2016 IPR001478 PDZ domain GO:0005515 SDY_2856 3ab1e503e3e953ea6b91720eb832faaf 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 1.6E-18 T 21-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 SDY_2856 3ab1e503e3e953ea6b91720eb832faaf 52 PANTHER PTHR21659 3 51 1.9E-18 T 21-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 SDY_2856 3ab1e503e3e953ea6b91720eb832faaf 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 21-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.39 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.0E-38 T 21-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 Gene3D G3DSA:2.40.50.140 6 82 4.4E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3487 269efc68924760e54d96bb26e1d8210a 84 SUPERFAMILY SSF50249 5 82 7.28E-34 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3487 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.8E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.8E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.8E-14 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 PANTHER PTHR10744 6 83 1.4E-44 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-34 T 21-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3487 269efc68924760e54d96bb26e1d8210a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 21-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_1913 d76423633d187393a762bd901939a25e 248 PANTHER PTHR24220 3 248 6.0E-127 T 21-04-2016 SDY_1913 d76423633d187393a762bd901939a25e 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.4E-114 T 21-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SDY_1913 d76423633d187393a762bd901939a25e 248 Pfam PF00005 ABC transporter 17 172 1.9E-19 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1913 d76423633d187393a762bd901939a25e 248 PANTHER PTHR24220:SF85 3 248 6.0E-127 T 21-04-2016 SDY_1913 d76423633d187393a762bd901939a25e 248 Gene3D G3DSA:3.40.50.300 1 236 5.2E-46 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1913 d76423633d187393a762bd901939a25e 248 SUPERFAMILY SSF52540 2 231 4.67E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1913 d76423633d187393a762bd901939a25e 248 SMART SM00382 26 223 3.7E-9 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1913 d76423633d187393a762bd901939a25e 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 376 1.3E-31 T 21-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 PANTHER PTHR41972 1 434 5.8E-201 T 21-04-2016 SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 321 337 - T 21-04-2016 IPR033379 Histidine acid phosphatase active site SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 Gene3D G3DSA:3.40.50.1240 29 141 1.5E-77 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 Gene3D G3DSA:3.40.50.1240 284 433 1.5E-77 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 Gene3D G3DSA:3.40.50.1240 142 282 9.0E-52 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 32 46 - T 21-04-2016 IPR033379 Histidine acid phosphatase active site SDY_0956 51e9700ee009a94dc74ffc03b158eab7 434 SUPERFAMILY SSF53254 28 431 1.51E-80 T 21-04-2016 IPR029033 Histidine phosphatase superfamily SDY_3773 779729355b39f0a9064b8cd257dc0f03 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.7E-59 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 SDY_3773 779729355b39f0a9064b8cd257dc0f03 105 Gene3D G3DSA:1.10.140.10 2 105 3.0E-65 T 21-04-2016 IPR023453 Methionine repressor MetJ domain SDY_3773 779729355b39f0a9064b8cd257dc0f03 105 SUPERFAMILY SSF47598 2 105 2.45E-58 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_3773 779729355b39f0a9064b8cd257dc0f03 105 Hamap MF_00744 Met repressor [metJ]. 1 105 42.783 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 SDY_3773 779729355b39f0a9064b8cd257dc0f03 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 21-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.2E-61 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 SUPERFAMILY SSF56655 1 261 8.12E-86 T 21-04-2016 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 21-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PANTHER PTHR20854 1 267 2.5E-109 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.0E-36 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.0E-36 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.0E-36 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.0E-36 T 21-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 Gene3D G3DSA:3.30.540.10 2 152 7.1E-54 T 21-04-2016 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 Gene3D G3DSA:3.40.190.80 153 259 4.7E-38 T 21-04-2016 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 21-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 PANTHER PTHR20854:SF4 1 267 2.5E-109 T 21-04-2016 SDY_2729 69b76429d3550fd62e6843837fbee5af 267 Pfam PF00459 Inositol monophosphatase family 2 259 8.3E-74 T 21-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 SUPERFAMILY SSF46609 1 90 1.28E-36 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 SUPERFAMILY SSF54719 95 204 1.44E-45 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 Gene3D G3DSA:1.10.287.990 20 90 2.0E-32 T 21-04-2016 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PIRSF PIRSF000349 1 206 5.0E-81 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 4.4E-41 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 PANTHER PTHR11404 1 204 3.8E-107 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.3E-33 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3838 bbab1c390ef54a708ea392763d357c71 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 21-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_3258 28c52a839db1b7d71a2b4fd57671a682 110 PANTHER PTHR11586:SF19 1 110 9.4E-77 T 21-04-2016 SDY_3258 28c52a839db1b7d71a2b4fd57671a682 110 SUPERFAMILY SSF50249 5 109 1.42E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3258 28c52a839db1b7d71a2b4fd57671a682 110 Pfam PF01588 Putative tRNA binding domain 15 107 9.3E-31 T 21-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SDY_3258 28c52a839db1b7d71a2b4fd57671a682 110 Gene3D G3DSA:2.40.50.140 2 109 8.2E-37 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3258 28c52a839db1b7d71a2b4fd57671a682 110 PANTHER PTHR11586 1 110 9.4E-77 T 21-04-2016 SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 SUPERFAMILY SSF52821 15 142 2.23E-30 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 PANTHER PTHR12231:SF138 1 143 1.5E-50 T 21-04-2016 SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 Gene3D G3DSA:3.40.250.10 22 142 2.8E-27 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 PANTHER PTHR12231 1 143 1.5E-50 T 21-04-2016 SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 Pfam PF00581 Rhodanese-like domain 43 133 9.2E-17 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4044 9754234fea37b8c0cb276dafedc32ad0 143 SMART SM00450 40 138 8.1E-22 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_4262 0b306a15a9696a94e42c442c20f54150 141 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 116 134 - T 21-04-2016 IPR019897 RidA, conserved site SDY_4262 0b306a15a9696a94e42c442c20f54150 141 Pfam PF01042 Endoribonuclease L-PSP 20 139 2.9E-45 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_4262 0b306a15a9696a94e42c442c20f54150 141 PANTHER PTHR11803 11 140 3.0E-53 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_4262 0b306a15a9696a94e42c442c20f54150 141 Gene3D G3DSA:3.30.1330.40 16 140 4.1E-47 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_4262 0b306a15a9696a94e42c442c20f54150 141 SUPERFAMILY SSF55298 17 140 9.11E-44 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_4262 0b306a15a9696a94e42c442c20f54150 141 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 16 139 1.1E-53 T 21-04-2016 IPR006056 RidA family SDY_1184 da129183983652a81d945dde44bdd94f 518 PANTHER PTHR30161 1 518 1.2E-290 T 21-04-2016 SDY_1184 da129183983652a81d945dde44bdd94f 518 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 17 34 2.3E-15 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SDY_1184 da129183983652a81d945dde44bdd94f 518 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 82 2.3E-15 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SDY_1184 da129183983652a81d945dde44bdd94f 518 Pfam PF00771 FHIPEP family 1 506 3.0E-181 T 21-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SDY_1184 da129183983652a81d945dde44bdd94f 518 PANTHER PTHR30161:SF1 1 518 1.2E-290 T 21-04-2016 SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 SUPERFAMILY SSF53335 18 237 7.18E-38 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 PANTHER PTHR23417 5 239 3.5E-89 T 21-04-2016 SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.136 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 Pfam PF02390 Putative methyltransferase 64 233 5.1E-62 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 Gene3D G3DSA:3.40.50.150 53 193 4.4E-14 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 PANTHER PTHR23417:SF14 5 239 3.5E-89 T 21-04-2016 SDY_3112 5b634dee80ccfec29836c64fa1419c75 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 4.1E-76 T 21-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 21-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SDY_4011 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.58E-8 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.58E-8 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.58E-8 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 21-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 21-04-2016 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 21-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 21-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SDY_4011 56b533cc370c1e28d908debdcf79489b 79 PANTHER PTHR10031 1 78 6.8E-25 T 21-04-2016 SDY_0665 89c01758909085a27f7c7d23331268de 405 SUPERFAMILY SSF52777 175 404 3.78E-90 T 21-04-2016 SDY_0665 89c01758909085a27f7c7d23331268de 405 SUPERFAMILY SSF51230 2 95 3.14E-24 T 21-04-2016 IPR011053 Single hybrid motif SDY_0665 89c01758909085a27f7c7d23331268de 405 Gene3D G3DSA:4.10.320.10 114 152 3.6E-20 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_0665 89c01758909085a27f7c7d23331268de 405 Pfam PF00364 Biotin-requiring enzyme 5 76 4.2E-17 T 21-04-2016 IPR000089 Biotin/lipoyl attachment SDY_0665 89c01758909085a27f7c7d23331268de 405 PANTHER PTHR23151 4 405 4.6E-249 T 21-04-2016 SDY_0665 89c01758909085a27f7c7d23331268de 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 9.0E-196 T 21-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 SDY_0665 89c01758909085a27f7c7d23331268de 405 Gene3D G3DSA:3.30.559.10 165 403 2.4E-92 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SDY_0665 89c01758909085a27f7c7d23331268de 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 1.9E-82 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SDY_0665 89c01758909085a27f7c7d23331268de 405 SUPERFAMILY SSF47005 106 151 1.83E-11 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_0665 89c01758909085a27f7c7d23331268de 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SDY_0665 89c01758909085a27f7c7d23331268de 405 PANTHER PTHR23151:SF47 4 405 4.6E-249 T 21-04-2016 SDY_0665 89c01758909085a27f7c7d23331268de 405 Gene3D G3DSA:2.40.50.100 1 96 7.6E-26 T 21-04-2016 SDY_0665 89c01758909085a27f7c7d23331268de 405 Pfam PF02817 e3 binding domain 114 147 2.4E-12 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_3132 5a011587366e3afe4916942498bd6d2c 71 ProDom PD056256 YQGC CYTOPLASMIC 1 51 3.0E-24 T 21-04-2016 IPR020102 Uncharacterised protein family YqgC SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 SUPERFAMILY SSF53167 9 484 1.7E-159 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 PANTHER PTHR21234 180 226 3.2E-134 T 21-04-2016 IPR018017 Nucleoside phosphorylase SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 PANTHER PTHR21234 249 484 3.2E-134 T 21-04-2016 IPR018017 Nucleoside phosphorylase SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 Gene3D G3DSA:3.30.1730.10 2 171 1.2E-65 T 21-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 Pfam PF01048 Phosphorylase superfamily 267 431 1.3E-18 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 3.6E-249 T 21-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 60.376 T 21-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 1.2E-50 T 21-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 Gene3D G3DSA:3.40.50.1580 174 466 1.6E-117 T 21-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 PANTHER PTHR21234:SF11 180 226 3.2E-134 T 21-04-2016 SDY_2253 87e5c99e53056cf6840f762c7b7bdc13 484 PANTHER PTHR21234:SF11 249 484 3.2E-134 T 21-04-2016 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 1.0E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 Gene3D G3DSA:1.10.3720.10 102 299 4.9E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 PANTHER PTHR30465 17 302 2.8E-143 T 21-04-2016 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 PANTHER PTHR30465:SF9 17 302 2.8E-143 T 21-04-2016 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 SUPERFAMILY SSF161098 100 283 3.92E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1303 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.5E-14 T 21-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SDY_1764 53e64180f32b2a28a011a57be47b4209 176 SUPERFAMILY SSF81342 4 172 1.02E-27 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_1764 53e64180f32b2a28a011a57be47b4209 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 4.4E-21 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_1764 53e64180f32b2a28a011a57be47b4209 176 PANTHER PTHR30529 1 176 3.8E-144 T 21-04-2016 SDY_1764 53e64180f32b2a28a011a57be47b4209 176 PANTHER PTHR30529:SF4 1 176 3.8E-144 T 21-04-2016 SDY_1898 fc7df4de702f526124ce47970ceed3d7 261 PANTHER PTHR30485:SF1 49 261 9.5E-85 T 21-04-2016 SDY_1898 fc7df4de702f526124ce47970ceed3d7 261 Pfam PF01292 Prokaryotic cytochrome b561 69 257 1.5E-28 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_1898 fc7df4de702f526124ce47970ceed3d7 261 SUPERFAMILY SSF81342 62 259 2.59E-25 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_1898 fc7df4de702f526124ce47970ceed3d7 261 Gene3D G3DSA:1.20.950.20 62 258 2.4E-35 T 21-04-2016 SDY_1898 fc7df4de702f526124ce47970ceed3d7 261 PANTHER PTHR30485 49 261 9.5E-85 T 21-04-2016 SDY_2812 6a47864645205b02d31d4491088179b7 318 PANTHER PTHR38782 2 318 1.7E-142 T 21-04-2016 SDY_2812 6a47864645205b02d31d4491088179b7 318 PANTHER PTHR38782:SF1 2 318 1.7E-142 T 21-04-2016 SDY_2812 6a47864645205b02d31d4491088179b7 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 2.0E-29 T 21-04-2016 IPR033436 MucB/RseB, C-terminal SDY_2812 6a47864645205b02d31d4491088179b7 318 Gene3D G3DSA:2.50.20.10 41 193 7.3E-8 T 21-04-2016 SDY_2812 6a47864645205b02d31d4491088179b7 318 PIRSF PIRSF005427 1 318 1.9E-102 T 21-04-2016 IPR005588 MucB/RseB SDY_2812 6a47864645205b02d31d4491088179b7 318 Pfam PF03888 MucB/RseB N-terminal domain 28 197 8.7E-62 T 21-04-2016 IPR033434 MucB/RseB, N-terminal SDY_3518 6dec421aecff53c08f79dd15432e59cb 134 PANTHER PTHR34352 1 134 1.8E-55 T 21-04-2016 SDY_3518 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:2.20.25.10 1 34 2.7E-19 T 21-04-2016 SDY_3518 6dec421aecff53c08f79dd15432e59cb 134 SUPERFAMILY SSF82784 1 132 1.96E-43 T 21-04-2016 IPR003718 OsmC/Ohr family SDY_3518 6dec421aecff53c08f79dd15432e59cb 134 Pfam PF02566 OsmC-like protein 30 127 2.8E-19 T 21-04-2016 IPR003718 OsmC/Ohr family SDY_3518 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:3.30.300.20 35 132 2.1E-43 T 21-04-2016 IPR015946 K homology domain-like, alpha/beta SDY_1125 641701ca2a971165e2b7e15b2a9cbea7 113 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 3.4E-44 T 21-04-2016 IPR019648 Protein of unknown function DUF2511 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 SMART SM00421 831 888 3.1E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PANTHER PTHR26402 808 895 1.1E-19 T 21-04-2016 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PANTHER PTHR26402 75 100 1.1E-19 T 21-04-2016 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 Pfam PF00196 Bacterial regulatory proteins, luxR family 833 888 1.8E-19 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 ProSitePatterns PS00622 LuxR-type HTH domain signature. 848 875 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 Gene3D G3DSA:1.25.40.10 439 806 7.8E-104 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 897 41.164 T 21-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 SUPERFAMILY SSF46894 826 890 1.6E-16 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 Gene3D G3DSA:1.10.10.10 833 890 5.7E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 Gene3D G3DSA:3.40.50.300 30 143 3.0E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PANTHER PTHR26402:SF567 808 895 1.1E-19 T 21-04-2016 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PANTHER PTHR26402:SF567 75 100 1.1E-19 T 21-04-2016 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 864 876 1.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 848 864 1.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 834 848 1.2E-10 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 SUPERFAMILY SSF48452 442 801 5.13E-150 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3658 85ef6eec4846e4224721555ad02a0d79 899 SUPERFAMILY SSF52540 6 232 1.91E-7 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PANTHER PTHR24322 11 129 3.3E-75 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PANTHER PTHR24322 146 178 3.3E-75 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PANTHER PTHR24322:SF343 11 129 3.3E-75 T 21-04-2016 SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PANTHER PTHR24322:SF343 146 178 3.3E-75 T 21-04-2016 SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 Gene3D G3DSA:3.40.50.720 4 234 1.3E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 5.1E-51 T 21-04-2016 SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.4E-36 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 SUPERFAMILY SSF51735 6 234 5.2E-64 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.9E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.9E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.9E-9 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_4267 ee5b0e001e0aa7d6fa91925c9f17f996 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 0.0029 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 PANTHER PTHR21248:SF12 385 479 6.1E-244 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 PANTHER PTHR21248:SF12 18 368 6.1E-244 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 SMART SM00155 384 411 3.4E-7 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 SMART SM00155 145 172 0.013 T 21-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 Pfam PF13091 PLD-like domain 59 204 8.3E-15 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_2304 2eaf43df670959d201ebbb45bd882881 493 Pfam PF13091 PLD-like domain 295 437 2.2E-27 T 21-04-2016 IPR025202 Phospholipase D-like domain SDY_2304 2eaf43df670959d201ebbb45bd882881 493 Gene3D G3DSA:3.30.870.10 11 206 4.1E-47 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 Gene3D G3DSA:3.30.870.10 212 458 8.6E-62 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 SUPERFAMILY SSF56024 225 457 9.87E-36 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 PANTHER PTHR21248 385 479 6.1E-244 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 PANTHER PTHR21248 18 368 6.1E-244 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 SUPERFAMILY SSF56024 34 212 1.38E-39 T 21-04-2016 SDY_2304 2eaf43df670959d201ebbb45bd882881 493 Hamap MF_01918 Cardiolipin synthase C [clsC]. 60 493 73.687 T 21-04-2016 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 SUPERFAMILY SSF46689 7 53 3.05E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 SUPERFAMILY SSF100950 62 315 9.21E-64 T 21-04-2016 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 Gene3D G3DSA:1.10.10.10 13 47 2.1E-6 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4311 55ab0069105d78ca38444375ae5eb319 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.6E-8 T 21-04-2016 IPR025246 Transposase IS30-like HTH domain SDY_4311 55ab0069105d78ca38444375ae5eb319 315 Gene3D G3DSA:3.40.50.1360 55 315 1.1E-74 T 21-04-2016 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 PANTHER PTHR34294:SF2 2 315 8.8E-96 T 21-04-2016 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 PANTHER PTHR34294 2 315 8.8E-96 T 21-04-2016 SDY_4311 55ab0069105d78ca38444375ae5eb319 315 Pfam PF04198 Putative sugar-binding domain 59 315 8.1E-76 T 21-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 SDY_0786 23b8aa955e966f3380b21e304332387f 219 Gene3D G3DSA:1.10.3720.10 13 217 4.4E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0786 23b8aa955e966f3380b21e304332387f 219 PANTHER PTHR30614 1 219 3.9E-179 T 21-04-2016 SDY_0786 23b8aa955e966f3380b21e304332387f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.7E-32 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_0786 23b8aa955e966f3380b21e304332387f 219 SUPERFAMILY SSF161098 13 202 4.71E-46 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0786 23b8aa955e966f3380b21e304332387f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.2E-25 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0786 23b8aa955e966f3380b21e304332387f 219 PANTHER PTHR30614:SF13 1 219 3.9E-179 T 21-04-2016 SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 2.0E-61 T 21-04-2016 IPR022161 DNA helicase IV, N-terminal domain SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Gene3D G3DSA:3.40.50.300 500 675 2.7E-23 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0937 96619c383689d2d8592ea4cf73215e53 684 PANTHER PTHR11070 99 677 0.0 T 21-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SDY_0937 96619c383689d2d8592ea4cf73215e53 684 PANTHER PTHR11070:SF26 99 677 0.0 T 21-04-2016 SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 5.6E-43 T 21-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Pfam PF13361 UvrD-like helicase C-terminal domain 538 659 5.9E-14 T 21-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SDY_0937 96619c383689d2d8592ea4cf73215e53 684 SUPERFAMILY SSF52540 195 330 3.52E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0937 96619c383689d2d8592ea4cf73215e53 684 SUPERFAMILY SSF52540 385 676 3.52E-83 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Gene3D G3DSA:3.40.50.300 196 329 8.3E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0937 96619c383689d2d8592ea4cf73215e53 684 Gene3D G3DSA:3.40.50.300 395 492 8.3E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 Gene3D G3DSA:1.20.1250.20 47 239 4.7E-42 T 21-04-2016 SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 PANTHER PTHR11662 1 472 8.3E-302 T 21-04-2016 SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 Gene3D G3DSA:1.20.1250.20 257 457 1.2E-20 T 21-04-2016 SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 Pfam PF07690 Major Facilitator Superfamily 56 326 2.1E-44 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 SUPERFAMILY SSF103473 42 452 2.88E-79 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 57 451 1.3E-123 T 21-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 SDY_3278 dcd15576a443937f6bc759c901acaf6c 472 PANTHER PTHR11662:SF285 1 472 8.3E-302 T 21-04-2016 SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 SUPERFAMILY SSF52833 5 118 3.46E-35 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Gene3D G3DSA:3.40.30.10 4 118 1.2E-48 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Pfam PF03960 ArsC family 8 117 1.6E-22 T 21-04-2016 IPR006660 Arsenate reductase-like SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 PANTHER PTHR30041 3 119 2.3E-70 T 21-04-2016 SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 PANTHER PTHR30041:SF4 3 119 2.3E-70 T 21-04-2016 SDY_2684 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 1.1E-48 T 21-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 PANTHER PTHR23502:SF10 12 410 0.0 T 21-04-2016 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 PANTHER PTHR23502 12 410 0.0 T 21-04-2016 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 Gene3D G3DSA:1.20.1250.20 18 193 6.9E-24 T 21-04-2016 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 Gene3D G3DSA:1.20.1250.20 214 408 7.8E-4 T 21-04-2016 SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 SUPERFAMILY SSF103473 17 401 2.35E-46 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4599 2efba75a99a0b3d2c14da2679b7d2ce9 410 Pfam PF07690 Major Facilitator Superfamily 23 354 9.4E-32 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 PIRSF PIRSF018427 1 180 1.7E-57 T 21-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 Gene3D G3DSA:3.90.79.10 31 166 4.4E-45 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 34.351 T 21-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 3.2E-46 T 21-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 Pfam PF00293 NUDIX domain 31 161 2.6E-19 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 SUPERFAMILY SSF55811 4 167 7.58E-51 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3193 34bb48ab5e7d7c6b6beb53b4cbb21346 182 PANTHER PTHR10885 1 168 7.3E-62 T 21-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Gene3D G3DSA:3.40.50.720 3 227 1.2E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 PIRSF PIRSF000124 4 419 3.6E-77 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-26 T 21-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 SMART SM00984 324 420 3.9E-21 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 PANTHER PTHR11374 1 420 6.6E-198 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Gene3D G3DSA:3.40.50.720 237 419 1.1E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 PIRSF PIRSF500136 1 420 2.0E-147 T 21-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 PANTHER PTHR11374:SF4 1 420 6.6E-198 T 21-04-2016 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 SUPERFAMILY SSF51735 5 198 1.74E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 SUPERFAMILY SSF52413 311 419 2.88E-24 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 5.3E-60 T 21-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 73.811 T 21-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 5.8E-119 T 21-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 SUPERFAMILY SSF48179 206 298 2.72E-28 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_3961 53429ca89267d2a3f27812b4ee9c856c 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 5.2E-18 T 21-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 Gene3D G3DSA:1.10.3210.10 2 194 1.9E-53 T 21-04-2016 IPR006674 HD domain SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.736 T 21-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 5.0E-48 T 21-04-2016 SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 SMART SM00471 26 151 1.6E-7 T 21-04-2016 IPR003607 HD/PDEase domain SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 Pfam PF13023 HD domain 11 160 6.9E-17 T 21-04-2016 IPR006674 HD domain SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 SUPERFAMILY SSF109604 2 193 2.86E-45 T 21-04-2016 SDY_2487 29362dd642e0022d4e6b00d1b5a36dd3 199 PANTHER PTHR11845 3 190 1.7E-51 T 21-04-2016 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 Pfam PF10150 Ribonuclease E/G family 121 391 1.9E-93 T 21-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 SUPERFAMILY SSF50249 40 124 1.82E-20 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 PANTHER PTHR30001 1 840 0.0 T 21-04-2016 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 Pfam PF00575 S1 RNA binding domain 36 118 3.5E-16 T 21-04-2016 IPR003029 S1 domain GO:0003676 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 PANTHER PTHR30001:SF1 1 840 0.0 T 21-04-2016 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 Hamap MF_00970 Ribonuclease E [rne]. 1 1047 40.692 T 21-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1022 1058 1.8E-16 T 21-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 6.2E-172 T 21-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 SMART SM00316 37 119 9.5E-12 T 21-04-2016 IPR022967 RNA-binding domain, S1 SDY_2067 f1a9947526211c4f8109aaf071ce1235 1061 Gene3D G3DSA:2.40.50.140 31 124 8.1E-36 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 370 5.1E-66 T 21-04-2016 IPR000160 GGDEF domain SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 366 4.5E-47 T 21-04-2016 IPR000160 GGDEF domain SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 Gene3D G3DSA:3.30.70.270 212 369 1.9E-46 T 21-04-2016 SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 Pfam PF05230 MASE2 domain 40 128 6.4E-28 T 21-04-2016 IPR007894 MASE2 SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 PANTHER PTHR10799:SF657 97 365 4.6E-27 T 21-04-2016 SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 PANTHER PTHR10799 97 365 4.6E-27 T 21-04-2016 SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 SUPERFAMILY SSF55073 215 368 4.71E-44 T 21-04-2016 IPR029787 Nucleotide cyclase SDY_0358 eb83ca0d3d12058f11e262596b3c01f5 371 SMART SM00267 199 370 1.0E-66 T 21-04-2016 IPR000160 GGDEF domain SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 Gene3D G3DSA:3.40.1020.10 339 512 4.1E-57 T 21-04-2016 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 8.8E-271 T 21-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.7E-29 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 3.3E-27 T 21-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 6.5E-77 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 PANTHER PTHR10314 1 368 1.3E-201 T 21-04-2016 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 SUPERFAMILY SSF53686 14 365 1.7E-101 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 SUPERFAMILY SSF55021 336 423 2.75E-28 T 21-04-2016 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 PANTHER PTHR10314:SF30 1 368 1.3E-201 T 21-04-2016 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 SUPERFAMILY SSF55021 420 512 6.64E-26 T 21-04-2016 SDY_3976 ed00307c1df40d72d16b4daf06c09756 514 Gene3D G3DSA:3.40.50.1100 81 333 2.2E-78 T 21-04-2016 SDY_2337 ae2794a89131c536e6628a86d1019515 261 SUPERFAMILY SSF53335 6 241 1.02E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2337 ae2794a89131c536e6628a86d1019515 261 PANTHER PTHR10108:SF919 1 215 2.9E-51 T 21-04-2016 SDY_2337 ae2794a89131c536e6628a86d1019515 261 Gene3D G3DSA:3.40.50.150 5 243 4.2E-38 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2337 ae2794a89131c536e6628a86d1019515 261 PANTHER PTHR10108 1 215 2.9E-51 T 21-04-2016 SDY_2337 ae2794a89131c536e6628a86d1019515 261 Pfam PF13847 Methyltransferase domain 45 151 1.2E-18 T 21-04-2016 IPR025714 Methyltransferase domain SDY_0829 e0f6e8dd125543723b2beed310103315 251 SUPERFAMILY SSF53335 10 244 5.0E-42 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0829 e0f6e8dd125543723b2beed310103315 251 Pfam PF08241 Methyltransferase domain 47 138 1.8E-24 T 21-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SDY_0829 e0f6e8dd125543723b2beed310103315 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 31.708 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SDY_0829 e0f6e8dd125543723b2beed310103315 251 Gene3D G3DSA:3.40.50.150 10 203 1.4E-40 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0829 e0f6e8dd125543723b2beed310103315 251 PANTHER PTHR10108:SF855 12 177 4.7E-53 T 21-04-2016 SDY_0829 e0f6e8dd125543723b2beed310103315 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 1.1E-77 T 21-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 SDY_0829 e0f6e8dd125543723b2beed310103315 251 PANTHER PTHR10108 12 177 4.7E-53 T 21-04-2016 SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 PANTHER PTHR10516 130 252 1.0E-50 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 1.0E-36 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 246 4.1E-28 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 Gene3D G3DSA:3.10.50.40 135 249 7.0E-45 T 21-04-2016 SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 Gene3D G3DSA:1.10.287.460 30 134 9.4E-45 T 21-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SDY_3508 a5bc9b9af6ead73582de5e675c6e93af 264 SUPERFAMILY SSF54534 41 249 1.1E-64 T 21-04-2016 SDY_2249 2f21e18fb32f9d3f9ea09d51b1666000 282 PANTHER PTHR11206 1 248 8.8E-50 T 21-04-2016 SDY_2249 2f21e18fb32f9d3f9ea09d51b1666000 282 Pfam PF01554 MatE 51 212 5.9E-21 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_2249 2f21e18fb32f9d3f9ea09d51b1666000 282 PANTHER PTHR11206:SF95 1 248 8.8E-50 T 21-04-2016 SDY_2430 ad10327386c5e7eef67ddf575a420521 84 Gene3D G3DSA:3.10.20.30 3 83 1.3E-18 T 21-04-2016 IPR012675 Beta-grasp domain SDY_2430 ad10327386c5e7eef67ddf575a420521 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 77 1.5E-10 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2430 ad10327386c5e7eef67ddf575a420521 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SDY_2430 ad10327386c5e7eef67ddf575a420521 84 SUPERFAMILY SSF54292 3 83 4.72E-21 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2013 e17bbfb4eb58e2ff3dc94f6405257dbd 131 PANTHER PTHR33293 4 126 1.3E-22 T 21-04-2016 SDY_2013 e17bbfb4eb58e2ff3dc94f6405257dbd 131 Pfam PF03400 IS1 transposase 2 131 1.3E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3915 720cd68095190f354da98e17062696be 317 Pfam PF03466 LysR substrate binding domain 86 288 1.7E-42 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3915 720cd68095190f354da98e17062696be 317 SUPERFAMILY SSF46785 2 109 7.07E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3915 720cd68095190f354da98e17062696be 317 SUPERFAMILY SSF53850 87 291 6.62E-41 T 21-04-2016 SDY_3915 720cd68095190f354da98e17062696be 317 PANTHER PTHR30126:SF25 1 303 3.5E-200 T 21-04-2016 SDY_3915 720cd68095190f354da98e17062696be 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.0E-16 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3915 720cd68095190f354da98e17062696be 317 Gene3D G3DSA:1.10.10.10 1 87 1.0E-22 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3915 720cd68095190f354da98e17062696be 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3915 720cd68095190f354da98e17062696be 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3915 720cd68095190f354da98e17062696be 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3915 720cd68095190f354da98e17062696be 317 PANTHER PTHR30126 1 303 3.5E-200 T 21-04-2016 SDY_3915 720cd68095190f354da98e17062696be 317 Gene3D G3DSA:3.40.190.10 178 253 6.3E-19 T 21-04-2016 SDY_3915 720cd68095190f354da98e17062696be 317 Gene3D G3DSA:3.40.190.10 90 177 2.2E-14 T 21-04-2016 SDY_3042 cf402430893957f10cb17a4324758eb4 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.8E-7 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3042 cf402430893957f10cb17a4324758eb4 187 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 1.8E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3042 cf402430893957f10cb17a4324758eb4 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3042 cf402430893957f10cb17a4324758eb4 187 PIRSF PIRSF004525 1 187 2.6E-64 T 21-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted SDY_1377 52c3c16648932b6125d64708e7f99e71 268 Pfam PF00005 ABC transporter 31 178 1.8E-33 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1377 52c3c16648932b6125d64708e7f99e71 268 SMART SM00382 39 228 2.1E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1377 52c3c16648932b6125d64708e7f99e71 268 PANTHER PTHR24220 7 255 2.0E-123 T 21-04-2016 SDY_1377 52c3c16648932b6125d64708e7f99e71 268 SUPERFAMILY SSF52540 5 251 1.15E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1377 52c3c16648932b6125d64708e7f99e71 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1377 52c3c16648932b6125d64708e7f99e71 268 PANTHER PTHR24220:SF81 7 255 2.0E-123 T 21-04-2016 SDY_1377 52c3c16648932b6125d64708e7f99e71 268 Gene3D G3DSA:3.40.50.300 3 251 9.9E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 Gene3D G3DSA:3.40.50.720 308 444 2.0E-37 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 Pfam PF02254 TrkA-N domain 316 427 1.1E-23 T 21-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 PANTHER PTHR16254:SF6 1 470 4.5E-178 T 21-04-2016 SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 PANTHER PTHR16254 1 470 4.5E-178 T 21-04-2016 SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 SUPERFAMILY SSF51735 315 442 1.03E-28 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3512 e06cdf04703c1ad4cbf55e741c60bbe5 514 Pfam PF00999 Sodium/hydrogen exchanger family 11 204 3.1E-34 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_3851 ed29993cf859e7bc56aba9437df4de6f 211 Gene3D G3DSA:1.20.950.20 1 209 3.8E-71 T 21-04-2016 SDY_3851 ed29993cf859e7bc56aba9437df4de6f 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 3.3E-22 T 21-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SDY_3851 ed29993cf859e7bc56aba9437df4de6f 211 PANTHER PTHR30074 1 211 1.9E-97 T 21-04-2016 SDY_3851 ed29993cf859e7bc56aba9437df4de6f 211 SUPERFAMILY SSF81342 4 205 9.28E-55 T 21-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SDY_3851 ed29993cf859e7bc56aba9437df4de6f 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 3.5E-66 T 21-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SDY_0711 d21ee2d45d2f1b00d1430aeaf33664ab 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 6.0E-22 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0711 d21ee2d45d2f1b00d1430aeaf33664ab 229 SUPERFAMILY SSF161098 6 220 5.63E-50 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0711 d21ee2d45d2f1b00d1430aeaf33664ab 229 PANTHER PTHR30183 1 227 9.4E-90 T 21-04-2016 SDY_0711 d21ee2d45d2f1b00d1430aeaf33664ab 229 Gene3D G3DSA:1.10.3720.10 8 226 4.9E-44 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0711 d21ee2d45d2f1b00d1430aeaf33664ab 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 4.0E-71 T 21-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 PANTHER PTHR38457 3 353 3.6E-103 T 21-04-2016 SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 165 7.9E-41 T 21-04-2016 IPR017516 AbrB duplication SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 188 344 2.1E-46 T 21-04-2016 IPR017516 AbrB duplication SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 PANTHER PTHR38457:SF1 3 353 3.6E-103 T 21-04-2016 SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 Pfam PF05145 Putative ammonia monooxygenase 34 344 1.2E-98 T 21-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SDY_0650 48dff472dbe0c353ba7f56ca93ea3a1d 353 PIRSF PIRSF038991 1 353 2.3E-101 T 21-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SDY_3641 652d7d10a9f1817ebefa4a154972570f 157 Gene3D G3DSA:3.40.930.10 6 148 2.6E-40 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3641 652d7d10a9f1817ebefa4a154972570f 157 SUPERFAMILY SSF55804 6 147 7.46E-36 T 21-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SDY_3641 652d7d10a9f1817ebefa4a154972570f 157 PANTHER PTHR30505:SF2 1 157 2.1E-48 T 21-04-2016 SDY_3641 652d7d10a9f1817ebefa4a154972570f 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 2.6E-33 T 21-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_3641 652d7d10a9f1817ebefa4a154972570f 157 PANTHER PTHR30505 1 157 2.1E-48 T 21-04-2016 SDY_1992 b4c95eb44832a2d24fc8bbf5513f587a 279 Gene3D G3DSA:3.30.420.10 102 261 1.7E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1992 b4c95eb44832a2d24fc8bbf5513f587a 279 Pfam PF00665 Integrase core domain 108 223 2.9E-34 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1992 b4c95eb44832a2d24fc8bbf5513f587a 279 SUPERFAMILY SSF53098 101 263 1.64E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1992 b4c95eb44832a2d24fc8bbf5513f587a 279 PANTHER PTHR32552 4 269 3.6E-75 T 21-04-2016 SDY_1395 b4c95eb44832a2d24fc8bbf5513f587a 279 Gene3D G3DSA:3.30.420.10 102 261 1.7E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1395 b4c95eb44832a2d24fc8bbf5513f587a 279 Pfam PF00665 Integrase core domain 108 223 2.9E-34 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1395 b4c95eb44832a2d24fc8bbf5513f587a 279 SUPERFAMILY SSF53098 101 263 1.64E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1395 b4c95eb44832a2d24fc8bbf5513f587a 279 PANTHER PTHR32552 4 269 3.6E-75 T 21-04-2016 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 PANTHER PTHR10617 1 417 1.2E-185 T 21-04-2016 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 Gene3D G3DSA:3.50.50.60 294 371 7.2E-37 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 Gene3D G3DSA:3.50.50.60 5 175 7.2E-37 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 PANTHER PTHR10617:SF117 1 417 1.2E-185 T 21-04-2016 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 SUPERFAMILY SSF51905 2 182 6.32E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 SUPERFAMILY SSF51905 283 394 6.32E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 Pfam PF01494 FAD binding domain 6 183 7.3E-13 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.9E-6 T 21-04-2016 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 5.9E-6 T 21-04-2016 SDY_1791 b925adf721e603ce11b7eef3c4b67794 429 SUPERFAMILY SSF54373 180 283 1.73E-23 T 21-04-2016 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 SUPERFAMILY SSF51703 1 454 1.41E-181 T 21-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 Pfam PF06368 Methylaspartate mutase E chain (MutE) 403 454 6.0E-14 T 21-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 404 1.6E-175 T 21-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 PIRSF PIRSF001495 1 405 3.2E-205 T 21-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 454 51.98 T 21-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 Gene3D G3DSA:3.90.970.10 403 454 9.5E-24 T 21-04-2016 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 404 7.6E-216 T 21-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0674 a4c01bf1ced0f7aadb1289ffe2cc35b5 454 Gene3D G3DSA:3.20.20.240 1 402 1.7E-190 T 21-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SDY_3822 ed655d305a6d155bdd26f3bc4fa8e404 107 PANTHER PTHR38769:SF1 1 99 2.9E-32 T 21-04-2016 SDY_3822 ed655d305a6d155bdd26f3bc4fa8e404 107 Pfam PF04175 Protein of unknown function (DUF406) 5 96 8.5E-29 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 SDY_3822 ed655d305a6d155bdd26f3bc4fa8e404 107 Gene3D G3DSA:3.30.70.860 23 99 3.2E-29 T 21-04-2016 SDY_3822 ed655d305a6d155bdd26f3bc4fa8e404 107 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 1.8E-37 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 SDY_3822 ed655d305a6d155bdd26f3bc4fa8e404 107 PANTHER PTHR38769 1 99 2.9E-32 T 21-04-2016 SDY_4187 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SDY_4187 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SDY_4187 a8a802f0d44be64679e9db985d203e64 85 PANTHER PTHR33383 1 84 5.9E-48 T 21-04-2016 SDY_4187 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SDY_4187 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SDY_4187 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 21-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SDY_0648 7c18c8c3ba32cf96cfe5967dca8b603c 244 Pfam PF03746 LamB/YcsF family 3 235 3.5E-94 T 21-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SDY_0648 7c18c8c3ba32cf96cfe5967dca8b603c 244 PANTHER PTHR30292 1 244 4.6E-130 T 21-04-2016 SDY_0648 7c18c8c3ba32cf96cfe5967dca8b603c 244 PANTHER PTHR30292:SF0 1 244 4.6E-130 T 21-04-2016 SDY_0648 7c18c8c3ba32cf96cfe5967dca8b603c 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.569 T 21-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SDY_0648 7c18c8c3ba32cf96cfe5967dca8b603c 244 SUPERFAMILY SSF88713 1 242 1.56E-92 T 21-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SDY_3090 af629838a722bb747503043ab1ae759f 562 Gene3D G3DSA:2.30.38.10 373 445 1.6E-17 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 Gene3D G3DSA:3.40.50.980 174 337 3.8E-31 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 Pfam PF00501 AMP-binding enzyme 33 453 4.3E-74 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_3090 af629838a722bb747503043ab1ae759f 562 PANTHER PTHR22754 25 547 1.3E-107 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 Gene3D G3DSA:3.40.50.980 33 173 9.0E-26 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 SUPERFAMILY SSF56801 369 550 8.5E-96 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 SUPERFAMILY SSF56801 32 340 8.5E-96 T 21-04-2016 SDY_3090 af629838a722bb747503043ab1ae759f 562 Gene3D G3DSA:3.30.300.30 446 547 9.5E-23 T 21-04-2016 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.2E-46 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 Gene3D G3DSA:3.50.50.60 2 262 1.6E-38 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PANTHER PTHR11985 5 497 7.5E-201 T 21-04-2016 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 SUPERFAMILY SSF51905 312 373 6.29E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 SUPERFAMILY SSF51905 1 260 6.29E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 SUPERFAMILY SSF54373 226 319 1.96E-6 T 21-04-2016 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 21-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_3649 dfd3dd306757b9666a75fb62fedc58ba 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 497 1.6E-12 T 21-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PANTHER PTHR34933 4 232 2.1E-85 T 21-04-2016 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PANTHER PTHR34933:SF1 4 232 2.1E-85 T 21-04-2016 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 Pfam PF02107 Flagellar L-ring protein 47 231 1.7E-60 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 1.8E-36 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 1.8E-36 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 1.8E-36 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 1.8E-36 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 1.8E-36 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_2072 b040a20eb454aa39383452cb5a4958f5 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 27.994 T 21-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SDY_1394 54aae13eb9176f98091863c4aea23844 177 SUPERFAMILY SSF53955 7 170 1.89E-34 T 21-04-2016 IPR023346 Lysozyme-like domain SDY_1394 54aae13eb9176f98091863c4aea23844 177 Gene3D G3DSA:1.10.530.40 29 170 3.6E-29 T 21-04-2016 IPR023347 Lysozyme domain GO:0003796 SDY_1394 54aae13eb9176f98091863c4aea23844 177 PANTHER PTHR38107:SF2 1 177 4.1E-68 T 21-04-2016 SDY_1394 54aae13eb9176f98091863c4aea23844 177 PANTHER PTHR38107 1 177 4.1E-68 T 21-04-2016 SDY_1394 54aae13eb9176f98091863c4aea23844 177 Pfam PF00959 Phage lysozyme 48 166 3.6E-27 T 21-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 PANTHER PTHR22936:SF30 1 275 1.7E-98 T 21-04-2016 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 6.2E-29 T 21-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 SUPERFAMILY SSF144091 92 267 7.46E-45 T 21-04-2016 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 Gene3D G3DSA:1.20.1540.10 94 267 8.9E-39 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 PANTHER PTHR22936 1 275 1.7E-98 T 21-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 276 49.525 T 21-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 1.6E-116 T 21-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 SDY_3651 2ea7cc66b1a0df2c1a205a300d1a87b7 276 Pfam PF01694 Rhomboid family 131 269 6.4E-29 T 21-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SDY_4071 103142c372162775cb3f2bc874806e02 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4071 103142c372162775cb3f2bc874806e02 198 PANTHER PTHR30055:SF58 1 193 1.4E-118 T 21-04-2016 SDY_4071 103142c372162775cb3f2bc874806e02 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 21-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SDY_4071 103142c372162775cb3f2bc874806e02 198 SUPERFAMILY SSF48498 84 193 4.45E-7 T 21-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SDY_4071 103142c372162775cb3f2bc874806e02 198 Gene3D G3DSA:1.10.357.10 7 190 2.6E-34 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_4071 103142c372162775cb3f2bc874806e02 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.932 T 21-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 SDY_4071 103142c372162775cb3f2bc874806e02 198 PANTHER PTHR30055 1 193 1.4E-118 T 21-04-2016 SDY_4071 103142c372162775cb3f2bc874806e02 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 4.8E-9 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_3958 242eac9f8fe01d18b5cbcfff1c959676 181 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 1 181 2.9E-96 T 21-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 SDY_3958 242eac9f8fe01d18b5cbcfff1c959676 181 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 1 181 43.461 T 21-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 SDY_3958 242eac9f8fe01d18b5cbcfff1c959676 181 Gene3D G3DSA:3.40.630.30 45 175 6.8E-14 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3958 242eac9f8fe01d18b5cbcfff1c959676 181 SUPERFAMILY SSF55729 10 175 1.68E-16 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1508 c514b495eb446b7410088c0c3213763b 183 Pfam PF00881 Nitroreductase family 9 161 1.3E-26 T 21-04-2016 IPR029479 Nitroreductase SDY_1508 c514b495eb446b7410088c0c3213763b 183 PANTHER PTHR23026 1 167 2.0E-92 T 21-04-2016 SDY_1508 c514b495eb446b7410088c0c3213763b 183 PANTHER PTHR23026:SF107 1 167 2.0E-92 T 21-04-2016 SDY_1508 c514b495eb446b7410088c0c3213763b 183 PIRSF PIRSF000232 1 182 8.6E-69 T 21-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SDY_1508 c514b495eb446b7410088c0c3213763b 183 SUPERFAMILY SSF55469 1 168 3.8E-40 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_1508 c514b495eb446b7410088c0c3213763b 183 Gene3D G3DSA:3.40.109.10 1 168 6.9E-42 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_2471 03564cdf54ddc3a552c88cd78ffd2ce0 167 Pfam PF08974 Domain of unknown function (DUF1877) 1 163 6.3E-34 T 21-04-2016 IPR015068 Protein of unknown function DUF1877 SDY_2471 03564cdf54ddc3a552c88cd78ffd2ce0 167 Gene3D G3DSA:3.40.1760.10 1 166 4.4E-50 T 21-04-2016 IPR015068 Protein of unknown function DUF1877 SDY_2471 03564cdf54ddc3a552c88cd78ffd2ce0 167 SUPERFAMILY SSF111069 3 165 7.32E-56 T 21-04-2016 IPR015068 Protein of unknown function DUF1877 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 9.9E-24 T 21-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PANTHER PTHR22773:SF50 1 567 3.2E-241 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PANTHER PTHR22773 1 567 3.2E-241 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 610 1.4E-237 T 21-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 7.3E-12 T 21-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 7.3E-12 T 21-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 7.3E-12 T 21-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 7.3E-12 T 21-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.5E-54 T 21-04-2016 SDY_2474 97b7bf930d6a97fe28fce25656102efa 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 5.7E-99 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SDY_0686 029ef8d31b6e4eba21b7bb703a4276ae 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.4E-23 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SDY_0686 029ef8d31b6e4eba21b7bb703a4276ae 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.4E-39 T 21-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 SDY_0686 029ef8d31b6e4eba21b7bb703a4276ae 142 PANTHER PTHR30558 1 141 1.5E-70 T 21-04-2016 SDY_0686 029ef8d31b6e4eba21b7bb703a4276ae 142 PANTHER PTHR30558:SF7 1 141 1.5E-70 T 21-04-2016 SDY_0038 5412fe17f70c87bfc2cc7ff490245de2 146 SUPERFAMILY SSF53062 1 124 3.01E-29 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_0038 5412fe17f70c87bfc2cc7ff490245de2 146 PANTHER PTHR33799 2 146 1.1E-67 T 21-04-2016 SDY_0038 5412fe17f70c87bfc2cc7ff490245de2 146 Pfam PF03610 PTS system fructose IIA component 3 116 4.0E-30 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_0038 5412fe17f70c87bfc2cc7ff490245de2 146 Gene3D G3DSA:3.40.50.510 1 133 4.9E-31 T 21-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SDY_0038 5412fe17f70c87bfc2cc7ff490245de2 146 PANTHER PTHR33799:SF1 2 146 1.1E-67 T 21-04-2016 SDY_4001 bac9b1e05bd3bd5d2a0dfa7bd75b2ebe 624 Pfam PF02705 K+ potassium transporter 14 546 7.9E-202 T 21-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SDY_4001 bac9b1e05bd3bd5d2a0dfa7bd75b2ebe 624 TIGRFAM TIGR00794 kup: potassium uptake protein 96 624 1.0E-205 T 21-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SDY_4001 bac9b1e05bd3bd5d2a0dfa7bd75b2ebe 624 PANTHER PTHR30540 16 624 5.4E-274 T 21-04-2016 SDY_4001 bac9b1e05bd3bd5d2a0dfa7bd75b2ebe 624 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 624 32.742 T 21-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup SDY_4001 bac9b1e05bd3bd5d2a0dfa7bd75b2ebe 624 PANTHER PTHR30540:SF7 16 624 5.4E-274 T 21-04-2016 SDY_0370 45586b2c11d9a150661950f8d02053dd 389 PANTHER PTHR22935 2 356 4.8E-79 T 21-04-2016 SDY_0370 45586b2c11d9a150661950f8d02053dd 389 Gene3D G3DSA:3.40.710.10 16 371 2.0E-69 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0370 45586b2c11d9a150661950f8d02053dd 389 PANTHER PTHR22935:SF77 2 356 4.8E-79 T 21-04-2016 SDY_0370 45586b2c11d9a150661950f8d02053dd 389 Pfam PF00144 Beta-lactamase 45 357 7.2E-64 T 21-04-2016 IPR001466 Beta-lactamase-related SDY_0370 45586b2c11d9a150661950f8d02053dd 389 SUPERFAMILY SSF56601 33 361 5.79E-68 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PANTHER PTHR24322 165 195 2.8E-114 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PANTHER PTHR24322 17 149 2.8E-114 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PANTHER PTHR24322:SF337 165 195 2.8E-114 T 21-04-2016 SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PANTHER PTHR24322:SF337 17 149 2.8E-114 T 21-04-2016 SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 SUPERFAMILY SSF51735 10 245 3.27E-62 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 Pfam PF00106 short chain dehydrogenase 14 208 2.4E-54 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 197 0.0018 T 21-04-2016 SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 Gene3D G3DSA:3.40.50.720 5 246 2.9E-68 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1341 b6f5e9c72e754b3f17fdcacbfe4a1ba9 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 7.3E-23 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 PIRSF PIRSF009564 1 107 8.0E-60 T 21-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 ProDom PD065392 HDEA PRECURSOR SIGNAL PERIPLASMIC 3D-STRUCTURE DIRECT 10K-S SEQUENCING 38 108 1.0E-34 T 21-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 Hamap MF_00946 Acid stress chaperone HdeA [hdeA]. 1 106 34.938 T 21-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 Pfam PF06411 HdeA/HdeB family 12 96 5.0E-27 T 21-04-2016 IPR010486 HNS-dependent expression A/B SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 SUPERFAMILY SSF47752 30 108 1.44E-43 T 21-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 SDY_3543 3ebfa9baa4ef7004cb2d24c105fbd7db 110 Gene3D G3DSA:1.10.890.10 22 110 4.1E-42 T 21-04-2016 IPR010486 HNS-dependent expression A/B SDY_4277 c1ce4550f2fd26228902b5e45090e656 138 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.5E-33 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain SDY_4277 c1ce4550f2fd26228902b5e45090e656 138 Gene3D G3DSA:3.30.70.970 1 124 1.7E-55 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain SDY_4277 c1ce4550f2fd26228902b5e45090e656 138 SUPERFAMILY SSF89946 2 122 7.45E-43 T 21-04-2016 IPR009671 Regulator of ribonuclease activity B domain SDY_4277 c1ce4550f2fd26228902b5e45090e656 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.689 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B SDY_4277 c1ce4550f2fd26228902b5e45090e656 138 PIRSF PIRSF018193 1 138 1.4E-67 T 21-04-2016 IPR016716 Regulator of ribonuclease activity B SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 Gene3D G3DSA:2.60.120.10 18 169 1.6E-40 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 3.3E-16 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 21-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 SMART SM00100 30 151 2.9E-22 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 Gene3D G3DSA:1.10.10.10 170 244 3.7E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 PANTHER PTHR24567 5 248 2.9E-135 T 21-04-2016 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 SUPERFAMILY SSF46785 165 246 4.65E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 SMART SM00419 187 235 2.8E-13 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 PANTHER PTHR24567:SF28 5 248 2.9E-135 T 21-04-2016 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 9.8E-16 T 21-04-2016 IPR000595 Cyclic nucleotide-binding domain SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 SUPERFAMILY SSF51206 23 162 1.27E-31 T 21-04-2016 IPR018490 Cyclic nucleotide-binding-like SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_1415 26e0d430b71f674c0cbeda9148e8ae41 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 21-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 PIRSF PIRSF006156 3 92 2.4E-24 T 21-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 5 92 2.5E-32 T 21-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 91 3.2E-27 T 21-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 SUPERFAMILY SSF143011 4 91 6.67E-24 T 21-04-2016 SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 TIGRFAM TIGR00053 TIGR00053: addiction module toxin component, YafQ family 4 91 1.3E-35 T 21-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SDY_0251 b967d81380b1280c383dfbffc1897c2a 92 PANTHER PTHR40588 1 92 1.6E-37 T 21-04-2016 SDY_1890 305ac50106d941fca0200c478429856b 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 54.428 T 21-04-2016 IPR022913 Multidrug resistance protein MdtK SDY_1890 305ac50106d941fca0200c478429856b 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 3.0E-125 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_1890 305ac50106d941fca0200c478429856b 457 Pfam PF01554 MatE 17 177 1.9E-41 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_1890 305ac50106d941fca0200c478429856b 457 Pfam PF01554 MatE 244 405 2.4E-38 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_1890 305ac50106d941fca0200c478429856b 457 PIRSF PIRSF006603 4 453 3.2E-57 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_1890 305ac50106d941fca0200c478429856b 457 PANTHER PTHR11206:SF153 2 441 4.7E-233 T 21-04-2016 SDY_1890 305ac50106d941fca0200c478429856b 457 PANTHER PTHR11206 2 441 4.7E-233 T 21-04-2016 SDY_0537 d54c461f9ce89972323c3e9f2636220b 217 PANTHER PTHR30083:SF0 2 216 8.5E-119 T 21-04-2016 SDY_0537 d54c461f9ce89972323c3e9f2636220b 217 SUPERFAMILY SSF52402 12 216 1.01E-35 T 21-04-2016 SDY_0537 d54c461f9ce89972323c3e9f2636220b 217 PANTHER PTHR30083 2 216 8.5E-119 T 21-04-2016 SDY_0537 d54c461f9ce89972323c3e9f2636220b 217 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 216 9.6E-11 T 21-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SDY_0537 d54c461f9ce89972323c3e9f2636220b 217 Gene3D G3DSA:3.40.50.620 14 216 2.2E-28 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3152 dba4294a3165bd822c793ae95f0fc29c 235 PANTHER PTHR33514:SF4 1 233 2.6E-36 T 21-04-2016 SDY_3152 dba4294a3165bd822c793ae95f0fc29c 235 PANTHER PTHR33514 1 233 2.6E-36 T 21-04-2016 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 597 614 - T 21-04-2016 IPR010917 TonB-dependent receptor, conserved site SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 PANTHER PTHR30069 1 597 0.0 T 21-04-2016 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 Gene3D G3DSA:2.170.130.10 20 152 3.3E-41 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 1.8E-29 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 SUPERFAMILY SSF56935 26 614 1.86E-127 T 21-04-2016 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 PANTHER PTHR30069:SF10 1 597 0.0 T 21-04-2016 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 614 35.854 T 21-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 614 1.2E-271 T 21-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 21-04-2016 IPR010916 TonB box, conserved site SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 Pfam PF00593 TonB dependent receptor 390 613 2.4E-32 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_3762 6e4f91f5e6accd4aedf34049f6e0aee3 614 Gene3D G3DSA:2.40.170.20 153 614 2.0E-100 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1302 abbc6cc036fdba1e8a1dde463ada368b 306 Gene3D G3DSA:1.10.3720.10 88 302 1.1E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1302 abbc6cc036fdba1e8a1dde463ada368b 306 PANTHER PTHR30465 1 306 2.1E-164 T 21-04-2016 SDY_1302 abbc6cc036fdba1e8a1dde463ada368b 306 SUPERFAMILY SSF161098 89 291 2.62E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1302 abbc6cc036fdba1e8a1dde463ada368b 306 PANTHER PTHR30465:SF74 1 306 2.1E-164 T 21-04-2016 SDY_1302 abbc6cc036fdba1e8a1dde463ada368b 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.3E-38 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 ProSitePatterns PS00927 Trehalase signature 1. 149 162 - T 21-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 ProSitePatterns PS00928 Trehalase signature 2. 446 455 - T 21-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 Hamap MF_01060 Periplasmic trehalase [treA]. 1 534 82.335 T 21-04-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PANTHER PTHR23403 12 564 0.0 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 SUPERFAMILY SSF48208 39 539 2.31E-174 T 21-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 Pfam PF01204 Trehalase 55 532 1.0E-175 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 266 283 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 191 209 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 516 529 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 332 349 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 375 391 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 439 455 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 300 317 4.6E-50 T 21-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 SDY_1246 1a336b36b1d35679f3f073afc82ab210 565 PANTHER PTHR23403:SF13 12 564 0.0 T 21-04-2016 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 SUPERFAMILY SSF48008 106 226 3.4E-19 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PANTHER PTHR11751 18 84 3.1E-52 T 21-04-2016 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PANTHER PTHR11751 104 122 3.1E-52 T 21-04-2016 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 Gene3D G3DSA:1.20.120.530 104 226 2.4E-17 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3992 6c85b0da0039d29f693223cec0a75643 230 SMART SM00345 18 77 6.5E-21 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 SUPERFAMILY SSF46785 10 81 1.77E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3992 6c85b0da0039d29f693223cec0a75643 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 1.1E-19 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 Pfam PF07729 FCD domain 108 226 2.0E-19 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3992 6c85b0da0039d29f693223cec0a75643 230 SMART SM00895 106 227 2.9E-17 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PANTHER PTHR11751:SF408 18 84 3.1E-52 T 21-04-2016 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PANTHER PTHR11751:SF408 104 122 3.1E-52 T 21-04-2016 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.4E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.4E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3992 6c85b0da0039d29f693223cec0a75643 230 Gene3D G3DSA:1.10.10.10 11 87 1.0E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2876 cc906415f4e05d05b668454d07184e40 394 Gene3D G3DSA:1.20.1250.20 218 386 4.7E-10 T 21-04-2016 SDY_2876 cc906415f4e05d05b668454d07184e40 394 Pfam PF07690 Major Facilitator Superfamily 218 385 7.8E-10 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2876 cc906415f4e05d05b668454d07184e40 394 Pfam PF07690 Major Facilitator Superfamily 17 198 5.2E-24 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2876 cc906415f4e05d05b668454d07184e40 394 Gene3D G3DSA:1.20.1250.20 10 189 5.8E-25 T 21-04-2016 SDY_2876 cc906415f4e05d05b668454d07184e40 394 PANTHER PTHR23501:SF79 3 394 1.2E-212 T 21-04-2016 SDY_2876 cc906415f4e05d05b668454d07184e40 394 PANTHER PTHR23501 3 394 1.2E-212 T 21-04-2016 SDY_2876 cc906415f4e05d05b668454d07184e40 394 SUPERFAMILY SSF103473 9 388 1.23E-53 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0151 8dd5774e8f9862f9d97574a5b096f3f2 163 Pfam PF13953 PapC C-terminal domain 98 159 8.3E-10 T 21-04-2016 IPR025949 PapC-like, C-terminal domain SDY_0151 8dd5774e8f9862f9d97574a5b096f3f2 163 Pfam PF00577 Outer membrane usher protein 13 88 1.4E-14 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_0151 8dd5774e8f9862f9d97574a5b096f3f2 163 PANTHER PTHR30451 14 162 3.2E-75 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_0151 8dd5774e8f9862f9d97574a5b096f3f2 163 PANTHER PTHR30451:SF3 14 162 3.2E-75 T 21-04-2016 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 SUPERFAMILY SSF64288 75 246 4.71E-40 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 SMART SM00866 107 243 3.7E-32 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 Gene3D G3DSA:1.10.10.10 20 89 3.4E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 Pfam PF07702 UTRA domain 108 242 2.1E-35 T 21-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 SUPERFAMILY SSF46785 20 90 2.03E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.6E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.6E-10 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 Gene3D G3DSA:3.40.1410.10 93 247 2.9E-44 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 SMART SM00345 28 87 2.4E-15 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 4.8E-16 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PANTHER PTHR11751:SF433 136 159 2.2E-67 T 21-04-2016 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PANTHER PTHR11751:SF433 14 90 2.2E-67 T 21-04-2016 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PANTHER PTHR11751 136 159 2.2E-67 T 21-04-2016 SDY_2274 e7651cd274047e1c6cfe7a7008bcbc94 248 PANTHER PTHR11751 14 90 2.2E-67 T 21-04-2016 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 21-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PANTHER PTHR10584:SF183 1 315 6.0E-239 T 21-04-2016 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 SUPERFAMILY SSF53613 18 312 1.71E-52 T 21-04-2016 IPR029056 Ribokinase-like SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PRINTS PR00990 Ribokinase signature 21 42 2.4E-5 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PRINTS PR00990 Ribokinase signature 191 206 2.4E-5 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PRINTS PR00990 Ribokinase signature 234 245 2.4E-5 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PRINTS PR00990 Ribokinase signature 48 67 2.4E-5 T 21-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 Gene3D G3DSA:3.40.1190.20 18 317 3.8E-55 T 21-04-2016 IPR029056 Ribokinase-like SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 PANTHER PTHR10584 1 315 6.0E-239 T 21-04-2016 SDY_2273 4ec72cdfa8bfccbb2f5b0dcf23593711 321 Pfam PF00294 pfkB family carbohydrate kinase 19 306 3.9E-52 T 21-04-2016 IPR011611 Carbohydrate kinase PfkB SDY_1016 49e20b669c6a22107ae55b88b20918b2 87 Gene3D G3DSA:3.40.1420.10 9 87 1.2E-18 T 21-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SDY_1016 49e20b669c6a22107ae55b88b20918b2 87 SUPERFAMILY SSF89872 10 84 8.89E-7 T 21-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SDY_1016 49e20b669c6a22107ae55b88b20918b2 87 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 16 60 1.8E-4 T 21-04-2016 SDY_1713 852922afbe48445244c70e06decd0388 130 PANTHER PTHR11803 24 130 9.1E-33 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_1713 852922afbe48445244c70e06decd0388 130 SUPERFAMILY SSF55298 17 130 2.98E-27 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_1713 852922afbe48445244c70e06decd0388 130 Pfam PF01042 Endoribonuclease L-PSP 20 130 2.6E-28 T 21-04-2016 IPR006175 YjgF/YER057c/UK114 family SDY_1713 852922afbe48445244c70e06decd0388 130 Gene3D G3DSA:3.30.1330.40 22 129 1.7E-20 T 21-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SDY_1713 852922afbe48445244c70e06decd0388 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 106 124 - T 21-04-2016 IPR019897 RidA, conserved site SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 Pfam PF11806 Domain of unknown function (DUF3327) 52 166 3.7E-27 T 21-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 Gene3D G3DSA:3.40.50.1820 183 407 1.7E-47 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 PANTHER PTHR10907:SF55 135 361 1.3E-24 T 21-04-2016 SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 Gene3D G3DSA:2.60.40.10 17 153 1.9E-35 T 21-04-2016 IPR013783 Immunoglobulin-like fold SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 SUPERFAMILY SSF53474 184 408 3.01E-34 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 Pfam PF00756 Putative esterase 184 403 3.4E-37 T 21-04-2016 IPR000801 Putative esterase SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 PANTHER PTHR10907 135 361 1.3E-24 T 21-04-2016 SDY_1024 51b77c39af0d74eacf25de89c01223dd 409 SUPERFAMILY SSF81296 23 161 6.72E-31 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_1226 b387b334eff4aa690c067194f6660d7a 432 PANTHER PTHR13847:SF148 1 63 1.0E-259 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 PANTHER PTHR13847:SF148 107 431 1.0E-259 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 55.683 T 21-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 PANTHER PTHR13847 1 63 1.0E-259 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 PANTHER PTHR13847 107 431 1.0E-259 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 SUPERFAMILY SSF51905 107 271 1.94E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 SUPERFAMILY SSF51905 1 54 1.94E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 SUPERFAMILY SSF51905 359 417 1.94E-53 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Gene3D G3DSA:3.30.9.10 270 352 9.8E-15 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Gene3D G3DSA:3.30.9.10 135 193 9.8E-15 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 4.3E-69 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 SUPERFAMILY SSF54373 269 359 2.22E-16 T 21-04-2016 SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Gene3D G3DSA:3.40.50.720 1 96 5.9E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Gene3D G3DSA:3.40.50.720 194 269 5.9E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1226 b387b334eff4aa690c067194f6660d7a 432 Gene3D G3DSA:3.40.50.720 353 415 5.9E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 SMART SM00342 256 342 2.9E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 Pfam PF12833 Helix-turn-helix domain 262 342 5.8E-23 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 PANTHER PTHR11019:SF117 227 350 1.2E-83 T 21-04-2016 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 Gene3D G3DSA:1.10.10.60 237 295 6.7E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 PANTHER PTHR11019 227 350 1.2E-83 T 21-04-2016 SDY_2635 e92e667f3c42dea670cfc2599cf4d420 350 SUPERFAMILY SSF46689 240 290 4.3E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 460 8.4E-87 T 21-04-2016 IPR000914 Solute-binding protein family 5 domain SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 111 - T 21-04-2016 IPR023765 Solute-binding protein family 5, conserved site SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 Gene3D G3DSA:3.10.105.10 298 512 4.0E-63 T 21-04-2016 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 PANTHER PTHR30290:SF23 1 544 0.0 T 21-04-2016 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 PIRSF PIRSF002741 3 544 2.4E-112 T 21-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 Gene3D G3DSA:3.90.76.10 51 223 1.8E-48 T 21-04-2016 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 PANTHER PTHR30290 1 544 0.0 T 21-04-2016 SDY_1409 9d798df24a61ebf6f1cdb2fae7a39667 544 SUPERFAMILY SSF53850 39 535 2.23E-139 T 21-04-2016 SDY_2992 91125d86c5990eedaad269645bef7a6c 236 PANTHER PTHR30373 23 229 8.4E-17 T 21-04-2016 SDY_2992 91125d86c5990eedaad269645bef7a6c 236 PANTHER PTHR30373:SF2 23 229 8.4E-17 T 21-04-2016 SDY_2992 91125d86c5990eedaad269645bef7a6c 236 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 23 149 1.9E-18 T 21-04-2016 IPR007621 TPM domain SDY_4646 767070e7fc21e497c95c638af22f1de4 87 SMART SM00530 22 76 1.1E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4646 767070e7fc21e497c95c638af22f1de4 87 Pfam PF01381 Helix-turn-helix 23 76 5.3E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4646 767070e7fc21e497c95c638af22f1de4 87 SUPERFAMILY SSF47413 17 79 6.19E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4646 767070e7fc21e497c95c638af22f1de4 87 Gene3D G3DSA:1.10.260.40 23 79 3.9E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0547 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.396 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SDY_0547 4dd5a755e2791c6c7a18454ca9bf5dd6 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 6.6E-45 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SDY_0547 4dd5a755e2791c6c7a18454ca9bf5dd6 127 PANTHER PTHR28259 2 121 5.1E-43 T 21-04-2016 SDY_0547 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 5.9E-24 T 21-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SDY_1190 23b97a72644ccaa03a43a6af19e7e56a 181 SUPERFAMILY SSF160930 5 149 1.57E-55 T 21-04-2016 SDY_1190 23b97a72644ccaa03a43a6af19e7e56a 181 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 181 4.0E-104 T 21-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 SDY_1190 23b97a72644ccaa03a43a6af19e7e56a 181 PIRSF PIRSF003159 1 170 6.4E-77 T 21-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 SDY_1190 23b97a72644ccaa03a43a6af19e7e56a 181 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 161 9.8E-68 T 21-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 SDY_1190 23b97a72644ccaa03a43a6af19e7e56a 181 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 175 39.433 T 21-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.2E-18 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 SMART SM00382 32 231 2.3E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 PANTHER PTHR24220 5 321 1.2E-230 T 21-04-2016 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 PANTHER PTHR24220:SF576 5 321 1.2E-230 T 21-04-2016 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 Gene3D G3DSA:3.40.50.300 2 255 3.4E-69 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 Pfam PF00005 ABC transporter 24 181 1.3E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 SUPERFAMILY SSF52540 31 308 6.66E-64 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4564 c45f132b5974f0c6f362bbae7dc35ab7 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 6.6E-28 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_0518 df623b2e47adba8c559648b451d1e64a 377 Gene3D G3DSA:3.30.1890.10 52 214 2.0E-68 T 21-04-2016 SDY_0518 df623b2e47adba8c559648b451d1e64a 377 SUPERFAMILY SSF160355 64 330 1.2E-83 T 21-04-2016 SDY_0518 df623b2e47adba8c559648b451d1e64a 377 Gene3D G3DSA:1.10.287.210 215 317 6.2E-46 T 21-04-2016 SDY_0518 df623b2e47adba8c559648b451d1e64a 377 Pfam PF02706 Chain length determinant protein 25 173 4.5E-25 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 Pfam PF00549 CoA-ligase 337 492 5.1E-51 T 21-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 SUPERFAMILY SSF52210 340 494 9.77E-7 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 Pfam PF02629 CoA binding domain 200 288 3.2E-11 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 SUPERFAMILY SSF52210 188 318 4.12E-12 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 PANTHER PTHR11117 32 556 3.9E-273 T 21-04-2016 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 PANTHER PTHR11117:SF10 32 556 3.9E-273 T 21-04-2016 SDY_0268 2dd19d28851410f97fbc997ec84f7b54 556 Gene3D G3DSA:3.40.50.261 166 292 1.1E-10 T 21-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 SUPERFAMILY SSF53383 1 396 5.23E-118 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 Gene3D G3DSA:3.40.640.10 45 315 2.9E-108 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PANTHER PTHR11879:SF11 1 395 3.0E-284 T 21-04-2016 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 PANTHER PTHR11879 1 395 3.0E-284 T 21-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 21-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SDY_2329 378fb80b3f4935dbe3a309d2cca355f1 396 Pfam PF00155 Aminotransferase class I and II 28 392 4.1E-96 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.5E-15 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.5E-15 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.5E-15 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-15 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 Gene3D G3DSA:3.50.50.60 184 353 4.6E-31 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 SUPERFAMILY SSF51905 6 345 2.54E-34 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PANTHER PTHR22912 208 348 2.0E-32 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PANTHER PTHR22912 7 192 2.0E-32 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.4E-8 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.4E-8 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-8 T 21-04-2016 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 Gene3D G3DSA:3.50.50.60 6 183 4.2E-25 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2041 ad3f02891df21ea2e318e2d250f654f6 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.2E-72 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_4530 2b8cbfd8c0dfb62f7a42bcba645e341b 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 5.5E-104 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_4530 2b8cbfd8c0dfb62f7a42bcba645e341b 441 PANTHER PTHR11206 8 430 1.2E-143 T 21-04-2016 SDY_4530 2b8cbfd8c0dfb62f7a42bcba645e341b 441 Pfam PF01554 MatE 17 178 8.8E-35 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_4530 2b8cbfd8c0dfb62f7a42bcba645e341b 441 Pfam PF01554 MatE 241 394 5.6E-10 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_4530 2b8cbfd8c0dfb62f7a42bcba645e341b 441 PANTHER PTHR11206:SF94 8 430 1.2E-143 T 21-04-2016 SDY_3068 b7836ee9799a39305a63102feb8ba37d 141 PANTHER PTHR30558:SF9 11 136 2.5E-79 T 21-04-2016 SDY_3068 b7836ee9799a39305a63102feb8ba37d 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 4.4E-69 T 21-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 SDY_3068 b7836ee9799a39305a63102feb8ba37d 141 PANTHER PTHR30558 11 136 2.5E-79 T 21-04-2016 SDY_3068 b7836ee9799a39305a63102feb8ba37d 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 1.4E-29 T 21-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.4E-102 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PANTHER PTHR21256:SF14 6 433 0.0 T 21-04-2016 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 Gene3D G3DSA:3.40.50.1980 30 240 2.9E-82 T 21-04-2016 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 SUPERFAMILY SSF53720 6 429 4.51E-92 T 21-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 Pfam PF00815 Histidinol dehydrogenase 28 427 1.5E-165 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PANTHER PTHR21256 6 433 0.0 T 21-04-2016 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 PIRSF PIRSF000099 1 430 4.6E-171 T 21-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 21-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.265 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_2221 58476d09baaf7c495324db8b0ee5a0d7 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 5.7E-161 T 21-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 SUPERFAMILY SSF103473 4 290 2.62E-27 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 Gene3D G3DSA:1.20.1250.20 18 185 1.3E-19 T 21-04-2016 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 Pfam PF00854 POT family 76 437 1.2E-90 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 PANTHER PTHR11654 1 368 9.9E-244 T 21-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 457 1.5E-79 T 21-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 PANTHER PTHR11654:SF135 1 368 9.9E-244 T 21-04-2016 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 21-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4467 9afa1505cad757e50d3a705b104cc88a 485 SUPERFAMILY SSF103473 213 473 1.96E-5 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4006 5534b9253028c93174343cea10b0bdb2 147 Gene3D G3DSA:3.40.50.360 1 146 4.3E-34 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_4006 5534b9253028c93174343cea10b0bdb2 147 PANTHER PTHR19384:SF81 1 147 1.8E-62 T 21-04-2016 SDY_4006 5534b9253028c93174343cea10b0bdb2 147 SUPERFAMILY SSF52218 1 146 7.38E-38 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_4006 5534b9253028c93174343cea10b0bdb2 147 PANTHER PTHR19384 1 147 1.8E-62 T 21-04-2016 SDY_4006 5534b9253028c93174343cea10b0bdb2 147 Pfam PF00258 Flavodoxin 7 138 3.0E-23 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 PANTHER PTHR10996:SF161 1 328 2.4E-172 T 21-04-2016 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 SUPERFAMILY SSF51735 102 298 1.35E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1464 b902af7e42f730d4c266f382345cd73c 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 6.9E-35 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 Gene3D G3DSA:3.40.50.720 138 305 8.5E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1464 b902af7e42f730d4c266f382345cd73c 329 PANTHER PTHR10996 1 328 2.4E-172 T 21-04-2016 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 21-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 Gene3D G3DSA:3.40.50.720 1 137 5.0E-51 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1464 b902af7e42f730d4c266f382345cd73c 329 SUPERFAMILY SSF52283 2 135 7.75E-45 T 21-04-2016 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_1464 b902af7e42f730d4c266f382345cd73c 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 6.0E-52 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SDY_1464 b902af7e42f730d4c266f382345cd73c 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 8.9E-16 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 Gene3D G3DSA:1.10.10.10 3 98 2.7E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.3E-9 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.3E-9 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.3E-9 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 PANTHER PTHR33154 1 99 1.1E-62 T 21-04-2016 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 SMART SM00418 16 95 3.3E-26 T 21-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 SUPERFAMILY SSF46785 11 98 7.52E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2857 638afe4c1446c0304ffc967e0f852beb 99 PANTHER PTHR33154:SF10 1 99 1.1E-62 T 21-04-2016 SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 Gene3D G3DSA:1.10.10.10 16 85 2.2E-27 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 PANTHER PTHR30136:SF3 1 274 1.8E-118 T 21-04-2016 SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 SUPERFAMILY SSF46785 24 97 2.37E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 SMART SM00346 24 114 5.8E-38 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 Gene3D G3DSA:3.30.450.40 96 271 5.6E-58 T 21-04-2016 IPR029016 GAF domain-like SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 SUPERFAMILY SSF55781 95 271 1.11E-49 T 21-04-2016 IPR029016 GAF domain-like SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 Pfam PF01614 Bacterial transcriptional regulator 145 267 9.9E-42 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal SDY_4323 8c4665423dd5a03af35c1d2283c2532c 274 PANTHER PTHR30136 1 274 1.8E-118 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 535 659 2.1E-9 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 513 719 2.1E-48 T 21-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309 185 476 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309 495 726 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309 1 123 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 448 2.2E-33 T 21-04-2016 IPR032807 Tyrosine kinase, G-rich domain SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 Pfam PF02706 Chain length determinant protein 16 252 1.4E-51 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 SUPERFAMILY SSF52540 532 710 1.3E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309:SF14 185 476 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309:SF14 495 726 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 PANTHER PTHR32309:SF14 1 123 2.1E-264 T 21-04-2016 SDY_0957 4b346c25bc83d3819065bf0c2a3ad60b 726 Gene3D G3DSA:3.40.50.300 532 708 1.0E-30 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3023 7084e09705234bd9095527f4d011cf6b 243 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 21-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 Pfam PF00455 DeoR C terminal sensor domain 76 233 6.1E-44 T 21-04-2016 IPR014036 DeoR C-terminal sensor domain SDY_3023 7084e09705234bd9095527f4d011cf6b 243 PANTHER PTHR30363:SF12 1 241 7.7E-200 T 21-04-2016 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 Gene3D G3DSA:3.40.50.1360 78 214 1.6E-8 T 21-04-2016 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 SUPERFAMILY SSF46785 4 59 2.34E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3023 7084e09705234bd9095527f4d011cf6b 243 SMART SM01134 74 234 9.3E-50 T 21-04-2016 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 PANTHER PTHR30363 1 241 7.7E-200 T 21-04-2016 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 Gene3D G3DSA:1.10.10.10 1 53 4.7E-11 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3023 7084e09705234bd9095527f4d011cf6b 243 SMART SM00420 5 57 1.4E-22 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 SUPERFAMILY SSF100950 76 233 3.35E-27 T 21-04-2016 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.1E-21 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.5E-9 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3023 7084e09705234bd9095527f4d011cf6b 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.5E-9 T 21-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SDY_3185 9c8f7929d68cfe51e355a10748a5d223 88 PANTHER PTHR39585 1 88 3.3E-40 T 21-04-2016 SDY_3185 9c8f7929d68cfe51e355a10748a5d223 88 Gene3D G3DSA:1.10.150.250 2 85 3.9E-32 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase SDY_3185 9c8f7929d68cfe51e355a10748a5d223 88 PANTHER PTHR39585:SF1 1 88 3.3E-40 T 21-04-2016 SDY_3185 9c8f7929d68cfe51e355a10748a5d223 88 SUPERFAMILY SSF109910 1 78 4.18E-27 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase SDY_3185 9c8f7929d68cfe51e355a10748a5d223 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 75 1.2E-25 T 21-04-2016 IPR005631 Flavinator of succinate dehydrogenase SDY_0435 1574335e4994d967e12641300a111b00 131 PANTHER PTHR36924 20 126 6.8E-51 T 21-04-2016 SDY_0435 1574335e4994d967e12641300a111b00 131 PANTHER PTHR36924:SF2 20 126 6.8E-51 T 21-04-2016 SDY_0435 1574335e4994d967e12641300a111b00 131 SUPERFAMILY SSF47413 29 105 1.04E-21 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_0435 1574335e4994d967e12641300a111b00 131 Pfam PF01381 Helix-turn-helix 34 87 8.0E-7 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_0435 1574335e4994d967e12641300a111b00 131 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 24 102 8.5E-30 T 21-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SDY_0435 1574335e4994d967e12641300a111b00 131 SMART SM00530 33 88 3.7E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_0435 1574335e4994d967e12641300a111b00 131 Gene3D G3DSA:1.10.260.40 17 106 2.6E-30 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3206 b18f416701102b3c46e36034fc406489 209 PANTHER PTHR11839 1 208 1.0E-129 T 21-04-2016 SDY_3206 b18f416701102b3c46e36034fc406489 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-85 T 21-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 SDY_3206 b18f416701102b3c46e36034fc406489 209 Gene3D G3DSA:3.90.79.10 11 208 1.1E-56 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3206 b18f416701102b3c46e36034fc406489 209 PANTHER PTHR11839:SF5 1 208 1.0E-129 T 21-04-2016 SDY_3206 b18f416701102b3c46e36034fc406489 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_3206 b18f416701102b3c46e36034fc406489 209 SUPERFAMILY SSF55811 6 208 1.14E-50 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3206 b18f416701102b3c46e36034fc406489 209 Pfam PF00293 NUDIX domain 59 179 1.4E-11 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_0780 6a2f146aa0790d136cf029543c51f0b7 527 SUPERFAMILY SSF53649 220 487 2.18E-20 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_0780 6a2f146aa0790d136cf029543c51f0b7 527 PANTHER PTHR30443:SF4 3 527 1.2E-303 T 21-04-2016 SDY_0780 6a2f146aa0790d136cf029543c51f0b7 527 Gene3D G3DSA:3.40.720.10 220 486 3.6E-13 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_0780 6a2f146aa0790d136cf029543c51f0b7 527 PANTHER PTHR30443 3 527 1.2E-303 T 21-04-2016 SDY_0780 6a2f146aa0790d136cf029543c51f0b7 527 Pfam PF00884 Sulfatase 217 483 1.3E-43 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 SMART SM00796 4 202 1.5E-92 T 21-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 PANTHER PTHR34698:SF2 2 215 1.4E-95 T 21-04-2016 SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.2E-105 T 21-04-2016 IPR010016 KipI family SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 SUPERFAMILY SSF160467 5 93 1.31E-8 T 21-04-2016 SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 SUPERFAMILY SSF50891 88 214 5.31E-46 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 PANTHER PTHR34698 2 215 1.4E-95 T 21-04-2016 SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 3.3E-69 T 21-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 Gene3D G3DSA:2.40.100.10 88 213 2.2E-51 T 21-04-2016 IPR029000 Cyclophilin-like domain SDY_0646 4ce9e35abd5a7d8c76a4ca9ddfe8fec8 218 Gene3D G3DSA:3.30.1360.40 6 79 2.5E-7 T 21-04-2016 IPR024946 Arginine repressor C-terminal-like domain SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 PANTHER PTHR35039 1 216 1.6E-151 T 21-04-2016 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 Hamap MF_01267 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [ulaD]. 1 216 69.564 T 21-04-2016 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD GO:0000287|GO:0019854|GO:0033982 KEGG: 00040+4.1.1.85|KEGG: 00053+4.1.1.85|MetaCyc: PWY-6961|UniPathway: UPA00263 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 3.5E-30 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 Gene3D G3DSA:3.20.20.70 2 215 3.7E-80 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 SMART SM00934 5 207 6.1E-36 T 21-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 SUPERFAMILY SSF51366 2 215 1.72E-40 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_4365 e8bc88e3a4bc46831217cff3e88b8325 216 PANTHER PTHR35039:SF3 1 216 1.6E-151 T 21-04-2016 SDY_P155 cb1ab6f76db67335e2bf5a9f71dc2519 117 SUPERFAMILY SSF53756 1 117 4.39E-34 T 21-04-2016 SDY_P155 cb1ab6f76db67335e2bf5a9f71dc2519 117 PANTHER PTHR21015 1 117 1.0E-29 T 21-04-2016 SDY_P155 cb1ab6f76db67335e2bf5a9f71dc2519 117 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 56 116 3.9E-11 T 21-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_P155 cb1ab6f76db67335e2bf5a9f71dc2519 117 PANTHER PTHR21015:SF22 1 117 1.0E-29 T 21-04-2016 SDY_P155 cb1ab6f76db67335e2bf5a9f71dc2519 117 Gene3D G3DSA:3.40.50.2000 25 117 3.6E-22 T 21-04-2016 SDY_2750 729d16ab9b249b0e82ac9327997268ee 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 2 211 1.1E-135 T 21-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SDY_2750 729d16ab9b249b0e82ac9327997268ee 211 Gene3D G3DSA:3.40.50.1000 99 129 6.8E-5 T 21-04-2016 IPR023214 HAD-like domain SDY_2750 729d16ab9b249b0e82ac9327997268ee 211 Gene3D G3DSA:3.40.50.1000 4 29 6.8E-5 T 21-04-2016 IPR023214 HAD-like domain SDY_2750 729d16ab9b249b0e82ac9327997268ee 211 SUPERFAMILY SSF56784 6 137 1.93E-7 T 21-04-2016 IPR023214 HAD-like domain SDY_2750 729d16ab9b249b0e82ac9327997268ee 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 1.6E-12 T 21-04-2016 SDY_0266 7e2bd7cbef46586df8672901ed462898 654 SUPERFAMILY SSF53448 22 365 3.8E-14 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_0266 7e2bd7cbef46586df8672901ed462898 654 PANTHER PTHR30258:SF2 428 651 3.6E-53 T 21-04-2016 SDY_0266 7e2bd7cbef46586df8672901ed462898 654 PANTHER PTHR30258 428 651 3.6E-53 T 21-04-2016 SDY_0266 7e2bd7cbef46586df8672901ed462898 654 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 475 579 8.6E-18 T 21-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SDY_0266 7e2bd7cbef46586df8672901ed462898 654 Pfam PF13632 Glycosyl transferase family group 2 116 332 1.9E-45 T 21-04-2016 IPR001173 Glycosyltransferase 2-like SDY_0266 7e2bd7cbef46586df8672901ed462898 654 SUPERFAMILY SSF160246 436 574 1.65E-25 T 21-04-2016 SDY_4626 a104b1662c4899b68c60010d198cbb87 78 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 78 4.0E-37 T 21-04-2016 IPR009885 Protein of unknown function DUF1435 SDY_4626 a104b1662c4899b68c60010d198cbb87 78 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 3.1E-33 T 21-04-2016 IPR009885 Protein of unknown function DUF1435 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 Pfam PF00582 Universal stress protein family 174 300 5.7E-15 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 Pfam PF00582 Universal stress protein family 3 146 3.6E-18 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 Gene3D G3DSA:3.40.50.620 143 303 2.2E-31 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 PANTHER PTHR31964:SF41 244 316 3.2E-77 T 21-04-2016 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 PANTHER PTHR31964:SF41 1 88 3.2E-77 T 21-04-2016 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 PANTHER PTHR31964 244 316 3.2E-77 T 21-04-2016 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 PANTHER PTHR31964 1 88 3.2E-77 T 21-04-2016 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 SUPERFAMILY SSF52402 155 307 5.86E-25 T 21-04-2016 SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 Gene3D G3DSA:3.40.50.620 1 142 5.7E-22 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1413 9c281d60bd194824b962ca7ca214dd73 316 SUPERFAMILY SSF52402 4 153 1.93E-25 T 21-04-2016 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 PANTHER PTHR11102:SF11 11 307 7.1E-102 T 21-04-2016 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 PANTHER PTHR11102 11 307 7.1E-102 T 21-04-2016 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 100 133 2.8E-4 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 242 277 2.9E-9 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 64 99 1.5E-7 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 27 63 4.1E-7 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 134 169 4.4E-13 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 206 241 1.8E-8 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 170 205 1.6E-9 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SMART SM00671 278 313 5.4E-6 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 103 132 0.0013 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 244 276 1.1E-7 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 65 99 0.0011 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 207 241 1.4E-6 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 134 169 1.1E-9 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 170 205 5.1E-7 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 27 63 9.1E-8 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Pfam PF08238 Sel1 repeat 282 307 0.0091 T 21-04-2016 IPR006597 Sel1-like repeat SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SUPERFAMILY SSF81901 20 113 3.53E-19 T 21-04-2016 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 SUPERFAMILY SSF81901 98 312 5.49E-54 T 21-04-2016 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Gene3D G3DSA:1.25.40.10 117 322 7.1E-62 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0568 e353f9bd92948f4064ca56bde7fa98c2 327 Gene3D G3DSA:1.25.40.10 19 114 2.4E-22 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2119 26d9c1b997d5c852c48d40c34612b474 290 PIRSF PIRSF029215 1 289 5.9E-79 T 21-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 SDY_2119 26d9c1b997d5c852c48d40c34612b474 290 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 2 65 1.0E-21 T 21-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 PANTHER PTHR14969 1 193 2.0E-85 T 21-04-2016 SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 PANTHER PTHR14969:SF20 1 193 2.0E-85 T 21-04-2016 SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 Gene3D G3DSA:1.20.144.10 3 165 3.8E-27 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 SMART SM00014 57 165 6.0E-32 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 SUPERFAMILY SSF48317 1 196 1.07E-42 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0843 fc75888a032d59ad0ef8f5c7c9716233 198 Pfam PF01569 PAP2 superfamily 58 166 2.2E-13 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 7.3E-110 T 21-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 9.6E-109 T 21-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 Gene3D G3DSA:3.20.20.140 5 332 3.4E-99 T 21-04-2016 SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 PANTHER PTHR11409 6 333 2.0E-107 T 21-04-2016 SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 21-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 SUPERFAMILY SSF51556 5 326 9.08E-78 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_1846 ef6ab9c6a40bfb4b3294bc7f1f7b016c 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.145 T 21-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SDY_0487 1de3a273399eb40bdf3c4bd2412eaef1 95 SUPERFAMILY SSF46689 56 90 2.8E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0487 1de3a273399eb40bdf3c4bd2412eaef1 95 Gene3D G3DSA:1.10.10.60 57 90 8.2E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0487 1de3a273399eb40bdf3c4bd2412eaef1 95 PANTHER PTHR33293 20 95 3.8E-27 T 21-04-2016 SDY_0487 1de3a273399eb40bdf3c4bd2412eaef1 95 Pfam PF12759 InsA C-terminal domain 47 92 2.1E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0487 1de3a273399eb40bdf3c4bd2412eaef1 95 Pfam PF03811 InsA N-terminal domain 21 40 6.2E-11 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 PANTHER PTHR23523 1 393 1.4E-188 T 21-04-2016 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 PANTHER PTHR23523:SF2 1 393 1.4E-188 T 21-04-2016 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 Gene3D G3DSA:1.20.1250.20 207 388 3.9E-13 T 21-04-2016 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 Gene3D G3DSA:1.20.1250.20 14 192 5.3E-16 T 21-04-2016 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 Pfam PF07690 Major Facilitator Superfamily 22 349 2.2E-18 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 SUPERFAMILY SSF103473 7 389 1.12E-43 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1689 6709aa587709f44ed932cbcfa35f1785 393 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 8.5E-150 T 21-04-2016 IPR004747 Cyanate transport system protein GO:0016021 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 5.0E-7 T 21-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 SUPERFAMILY SSF52343 100 231 2.23E-35 T 21-04-2016 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PANTHER PTHR19370 4 233 2.9E-148 T 21-04-2016 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 SUPERFAMILY SSF63380 3 97 6.99E-23 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.1E-13 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.1E-13 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.1E-13 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.1E-13 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.1E-13 T 21-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 7.6E-22 T 21-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 Gene3D G3DSA:2.40.30.10 3 98 2.9E-30 T 21-04-2016 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 PANTHER PTHR19370:SF119 4 233 2.9E-148 T 21-04-2016 SDY_3901 ccd722a4aa4760b122dc5ed7b60dc4a4 233 Gene3D G3DSA:3.40.50.80 100 231 7.1E-38 T 21-04-2016 SDY_1072 770d65e4d881bdeae3494d4fe8f992d5 278 SUPERFAMILY SSF55486 46 258 2.34E-39 T 21-04-2016 SDY_1072 770d65e4d881bdeae3494d4fe8f992d5 278 Gene3D G3DSA:3.40.390.10 44 257 3.8E-25 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SDY_1072 770d65e4d881bdeae3494d4fe8f992d5 278 PANTHER PTHR30164 14 263 6.4E-101 T 21-04-2016 SDY_1072 770d65e4d881bdeae3494d4fe8f992d5 278 Pfam PF06167 Glucose-regulated metallo-peptidase M90 21 256 8.4E-62 T 21-04-2016 IPR010384 MtfA family SDY_1072 770d65e4d881bdeae3494d4fe8f992d5 278 Hamap MF_01593 Protein MtfA [mtfA]. 14 278 62.902 T 21-04-2016 IPR010384 MtfA family SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:1.20.1580.10 407 477 5.6E-54 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:1.20.1580.10 251 284 5.6E-54 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:1.20.1580.10 91 129 5.6E-54 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 SUPERFAMILY SSF52540 433 569 1.61E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 SUPERFAMILY SSF52540 4 204 1.61E-43 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.234 T 21-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 PANTHER PTHR32282:SF2 1 940 0.0 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:1.20.1580.10 694 820 3.0E-54 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 SUPERFAMILY SSF52540 613 911 2.9E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 PANTHER PTHR32282 1 940 0.0 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.40.50.300 2 51 3.0E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.40.50.300 821 938 4.8E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.40.50.300 603 692 4.8E-58 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.40.50.300 478 599 3.0E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:1.10.8.280 286 406 5.5E-44 T 21-04-2016 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.30.1490.20 130 153 4.8E-28 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_4509 e4a3361aa79fc967f1c3164ee58dfc01 940 Gene3D G3DSA:3.30.1490.20 200 249 4.8E-28 T 21-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SDY_0012 f08fee411f43558307d4710a0a32edfd 119 Pfam PF10807 Protein of unknown function (DUF2541) 3 117 2.4E-61 T 21-04-2016 IPR020240 Uncharacterised protein family UPF0412, YaaI SDY_0012 f08fee411f43558307d4710a0a32edfd 119 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 1 119 1.0E-65 T 21-04-2016 IPR020240 Uncharacterised protein family UPF0412, YaaI SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 Gene3D G3DSA:1.20.1250.20 202 406 6.4E-25 T 21-04-2016 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 PANTHER PTHR23522 1 418 4.3E-290 T 21-04-2016 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 Gene3D G3DSA:1.20.1250.20 5 189 2.2E-14 T 21-04-2016 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 PANTHER PTHR23522:SF1 1 418 4.3E-290 T 21-04-2016 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.0E-195 T 21-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 Pfam PF03825 Nucleoside H+ symporter 1 405 2.0E-183 T 21-04-2016 SDY_2271 28e821c3c083bc30fb590876c9ece5b7 425 SUPERFAMILY SSF103473 6 404 1.31E-40 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0587 66fc3650cc23e7621efc6992a4c7b0f3 279 Gene3D G3DSA:3.30.420.10 102 261 1.7E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0587 66fc3650cc23e7621efc6992a4c7b0f3 279 Pfam PF00665 Integrase core domain 108 223 2.9E-34 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0587 66fc3650cc23e7621efc6992a4c7b0f3 279 SUPERFAMILY SSF53098 101 263 1.64E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0587 66fc3650cc23e7621efc6992a4c7b0f3 279 PANTHER PTHR32552 4 269 2.5E-75 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 SUPERFAMILY SSF103473 24 446 9.94E-70 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 3.8E-145 T 21-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 1.2E-22 T 21-04-2016 IPR015041 Osmosensory transporter coiled coil SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 SUPERFAMILY SSF103661 465 497 1.83E-12 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 PANTHER PTHR23508 1 462 1.0E-283 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 Gene3D G3DSA:1.20.1250.20 256 444 6.9E-28 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 Gene3D G3DSA:1.20.1250.20 24 230 1.3E-23 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 PANTHER PTHR23508:SF17 1 462 1.0E-283 T 21-04-2016 SDY_4102 5a9e22725a4e1db2084741b8bfe7124b 500 Pfam PF00083 Sugar (and other) transporter 28 448 5.4E-76 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_1450 3ee3e9ff987e20b185263babfb9113df 301 SUPERFAMILY SSF53098 125 291 3.79E-28 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1450 3ee3e9ff987e20b185263babfb9113df 301 Gene3D G3DSA:3.30.420.10 119 282 5.7E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1450 3ee3e9ff987e20b185263babfb9113df 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_1450 3ee3e9ff987e20b185263babfb9113df 301 Pfam PF00665 Integrase core domain 124 243 1.8E-22 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 PIRSF PIRSF002122 3 156 1.6E-63 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.962 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 PANTHER PTHR11205 1 156 1.9E-95 T 21-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 SUPERFAMILY SSF47973 6 149 9.03E-60 T 21-04-2016 IPR023798 Ribosomal protein S7 domain SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.5E-71 T 21-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.3E-64 T 21-04-2016 IPR023798 Ribosomal protein S7 domain SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 21-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SDY_3502 8a2653d841c0283ad440ffcdaacefd69 156 Gene3D G3DSA:1.10.455.10 8 156 4.6E-67 T 21-04-2016 IPR023798 Ribosomal protein S7 domain SDY_1601 c9303b8c4346245e19b319cce2002336 131 Pfam PF03400 IS1 transposase 2 131 1.5E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1601 c9303b8c4346245e19b319cce2002336 131 PANTHER PTHR33293:SF1 6 126 1.2E-25 T 21-04-2016 SDY_1601 c9303b8c4346245e19b319cce2002336 131 PANTHER PTHR33293 6 126 1.2E-25 T 21-04-2016 SDY_3565 2bd89d3b98155c6f3da077a090495249 250 PANTHER PTHR36112:SF1 1 250 4.6E-145 T 21-04-2016 SDY_3565 2bd89d3b98155c6f3da077a090495249 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.7E-105 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 SDY_3565 2bd89d3b98155c6f3da077a090495249 250 Gene3D G3DSA:3.40.50.150 57 247 6.4E-73 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3565 2bd89d3b98155c6f3da077a090495249 250 SUPERFAMILY SSF53335 11 246 5.92E-74 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3565 2bd89d3b98155c6f3da077a090495249 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.918 T 21-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 SDY_3565 2bd89d3b98155c6f3da077a090495249 250 Gene3D G3DSA:3.40.1630.10 1 56 7.1E-30 T 21-04-2016 SDY_3565 2bd89d3b98155c6f3da077a090495249 250 PANTHER PTHR36112 1 250 4.6E-145 T 21-04-2016 SDY_2228 43cd29c57248971e88c545aa78d27c45 301 Gene3D G3DSA:3.30.420.10 119 279 8.0E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2228 43cd29c57248971e88c545aa78d27c45 301 SUPERFAMILY SSF53098 121 291 2.53E-28 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2228 43cd29c57248971e88c545aa78d27c45 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_2228 43cd29c57248971e88c545aa78d27c45 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 0.0 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 PANTHER PTHR10283:SF93 12 167 0.0 T 21-04-2016 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 PANTHER PTHR10283:SF93 195 510 0.0 T 21-04-2016 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 0.0 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 368.351 T 21-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 PANTHER PTHR10283 12 167 0.0 T 21-04-2016 SDY_1223 e3552b4ea6d8fd8fd8efafa5032cb82a 513 PANTHER PTHR10283 195 510 0.0 T 21-04-2016 SDY_4048 bbf7da7d97c4e39594c392592f30a3d9 334 PANTHER PTHR22916:SF24 1 329 1.4E-134 T 21-04-2016 SDY_4048 bbf7da7d97c4e39594c392592f30a3d9 334 SUPERFAMILY SSF53448 7 225 2.16E-51 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4048 bbf7da7d97c4e39594c392592f30a3d9 334 Pfam PF00535 Glycosyl transferase family 2 9 137 1.1E-33 T 21-04-2016 IPR001173 Glycosyltransferase 2-like SDY_4048 bbf7da7d97c4e39594c392592f30a3d9 334 Gene3D G3DSA:3.90.550.10 3 207 6.1E-52 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_4048 bbf7da7d97c4e39594c392592f30a3d9 334 PANTHER PTHR22916 1 329 1.4E-134 T 21-04-2016 SDY_2185 6b0b3c3bfdf1bf63e97c90be8cdb9a49 271 Pfam PF13276 HTH-like domain 5 47 4.6E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_2185 6b0b3c3bfdf1bf63e97c90be8cdb9a49 271 Pfam PF00665 Integrase core domain 72 186 2.8E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2185 6b0b3c3bfdf1bf63e97c90be8cdb9a49 271 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_2185 6b0b3c3bfdf1bf63e97c90be8cdb9a49 271 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2185 6b0b3c3bfdf1bf63e97c90be8cdb9a49 271 SUPERFAMILY SSF53098 65 229 1.82E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 PANTHER PTHR21011:SF1 1 131 2.7E-52 T 21-04-2016 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 Gene3D G3DSA:3.30.70.60 1 103 3.8E-42 T 21-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 SUPERFAMILY SSF54995 1 103 1.02E-37 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 21-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.683 T 21-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-28 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 PANTHER PTHR21011 1 131 2.7E-52 T 21-04-2016 SDY_4369 eb3b97ed13530ca6568258f44c46e3b4 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-39 T 21-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 PANTHER PTHR30239 1 94 5.3E-67 T 21-04-2016 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 PANTHER PTHR30239:SF4 1 94 5.3E-67 T 21-04-2016 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 3.0E-14 T 21-04-2016 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 Pfam PF01842 ACT domain 10 73 1.0E-9 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 SUPERFAMILY SSF55021 9 80 1.86E-16 T 21-04-2016 SDY_4154 4b2679c4ab58e8c99dce00328120a195 96 Gene3D G3DSA:3.30.70.260 10 82 4.3E-21 T 21-04-2016 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 PANTHER PTHR23117:SF13 1 204 2.8E-108 T 21-04-2016 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 SUPERFAMILY SSF52540 3 189 6.92E-72 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.4E-76 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Pfam PF00625 Guanylate kinase 5 186 1.8E-71 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Gene3D G3DSA:3.40.50.300 18 43 3.3E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Gene3D G3DSA:3.30.63.10 44 87 4.1E-30 T 21-04-2016 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 21-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Gene3D G3DSA:3.40.50.300 1 17 7.2E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Gene3D G3DSA:3.40.50.300 88 204 7.2E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 SMART SM00072 3 187 9.0E-89 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 PANTHER PTHR23117 1 204 2.8E-108 T 21-04-2016 SDY_4080 ec07bbac6c390704dff67583ec02e9c2 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.342 T 21-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SDY_3654 8e5f8aca1bdcb2c5430db4d8fb397973 157 Gene3D G3DSA:1.10.8.60 11 65 2.4E-8 T 21-04-2016 SDY_3654 8e5f8aca1bdcb2c5430db4d8fb397973 157 PANTHER PTHR32071 1 156 5.8E-75 T 21-04-2016 SDY_3654 8e5f8aca1bdcb2c5430db4d8fb397973 157 PANTHER PTHR32071:SF14 1 156 5.8E-75 T 21-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 Gene3D G3DSA:1.10.3720.10 131 351 3.9E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 SUPERFAMILY SSF161098 131 345 1.7E-15 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 PANTHER PTHR30465 70 361 1.2E-227 T 21-04-2016 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 PANTHER PTHR30465 1 45 1.2E-227 T 21-04-2016 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 4.7E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 PANTHER PTHR30465:SF66 70 361 1.2E-227 T 21-04-2016 SDY_0901 088cefa7be9271d027aed9cbb4f4602a 364 PANTHER PTHR30465:SF66 1 45 1.2E-227 T 21-04-2016 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 SUPERFAMILY SSF51905 266 545 2.98E-28 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Gene3D G3DSA:3.50.50.60 571 645 4.6E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Gene3D G3DSA:3.50.50.60 396 477 4.6E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Gene3D G3DSA:3.50.50.60 261 344 4.6E-24 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Gene3D G3DSA:3.40.50.150 11 248 9.2E-106 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 PANTHER PTHR13847 226 585 3.1E-184 T 21-04-2016 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 PANTHER PTHR13847 603 666 3.1E-184 T 21-04-2016 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 5.1E-51 T 21-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 657 28.317 T 21-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 662 6.5E-157 T 21-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 PANTHER PTHR13847:SF182 226 585 3.1E-184 T 21-04-2016 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 PANTHER PTHR13847:SF182 603 666 3.1E-184 T 21-04-2016 SDY_2523 118708b655166a01b4d49d9509f0d0a8 668 Pfam PF01266 FAD dependent oxidoreductase 267 632 2.2E-46 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 Pfam PF03475 3-alpha domain 169 211 1.5E-14 T 21-04-2016 IPR005163 3-alpha domain SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 Gene3D G3DSA:2.40.33.20 4 223 1.1E-87 T 21-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 PANTHER PTHR30212 21 223 3.7E-77 T 21-04-2016 SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 PANTHER PTHR30212:SF2 21 223 3.7E-77 T 21-04-2016 SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 Pfam PF03473 MOSC domain 47 159 7.5E-20 T 21-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 SDY_3836 e77c8d2bf48a69b6cb990b68d73cc56a 224 SUPERFAMILY SSF50800 3 223 9.94E-76 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.9E-13 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.9E-13 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.9E-13 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.9E-13 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PRINTS PR00446 Hydrogen uptake protein signature 33 50 2.9E-13 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 2.8E-35 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PANTHER PTHR30302:SF4 1 155 2.6E-71 T 21-04-2016 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 147 2.3E-69 T 21-04-2016 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 Pfam PF01750 Hydrogenase maturation protease 23 140 2.5E-30 T 21-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SDY_2914 b819aa109144bccb478a4a46ada9b495 155 Gene3D G3DSA:3.40.50.1450 5 142 1.8E-24 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_2914 b819aa109144bccb478a4a46ada9b495 155 SUPERFAMILY SSF53163 4 152 2.12E-35 T 21-04-2016 IPR023430 Peptidase HybD-like domain SDY_2914 b819aa109144bccb478a4a46ada9b495 155 PANTHER PTHR30302 1 155 2.6E-71 T 21-04-2016 SDY_0217 1d3b240232f9de9fcb18b3019426a28e 217 SUPERFAMILY SSF161098 9 201 5.49E-47 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0217 1d3b240232f9de9fcb18b3019426a28e 217 PANTHER PTHR30450 1 217 1.6E-121 T 21-04-2016 SDY_0217 1d3b240232f9de9fcb18b3019426a28e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 1.0E-19 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0217 1d3b240232f9de9fcb18b3019426a28e 217 PANTHER PTHR30450:SF1 1 217 1.6E-121 T 21-04-2016 SDY_0217 1d3b240232f9de9fcb18b3019426a28e 217 Gene3D G3DSA:1.10.3720.10 9 214 2.3E-41 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2331 679f9d441d38637cd2f65af2dc47cc11 182 PANTHER PTHR37425 1 182 9.3E-80 T 21-04-2016 SDY_2331 679f9d441d38637cd2f65af2dc47cc11 182 Gene3D G3DSA:3.30.1380.10 67 182 4.1E-29 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SDY_2331 679f9d441d38637cd2f65af2dc47cc11 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.2E-61 T 21-04-2016 IPR010275 Protein of unknown function DUF882 SDY_2331 679f9d441d38637cd2f65af2dc47cc11 182 SUPERFAMILY SSF55166 68 182 1.33E-31 T 21-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417 1 111 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417 190 423 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417 130 140 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 SUPERFAMILY SSF53756 57 420 1.61E-19 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417:SF2 1 111 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417:SF2 190 423 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 PANTHER PTHR23417:SF2 130 140 1.9E-155 T 21-04-2016 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 Pfam PF00534 Glycosyl transferases group 1 235 398 5.6E-12 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 SDY_4063 8c1591d5cb6824d7365f737e16149fdb 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.8E-67 T 21-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 PANTHER PTHR23426 7 110 2.9E-44 T 21-04-2016 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 21-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 7.3E-63 T 21-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 SUPERFAMILY SSF54292 4 109 5.54E-36 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.2E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.2E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.2E-10 T 21-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 92 6.3E-16 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_2721 abc9b1cb0a0ccdd07993e02ec3edbed7 111 Gene3D G3DSA:3.10.20.30 4 108 8.4E-37 T 21-04-2016 IPR012675 Beta-grasp domain SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 SMART SM00382 32 235 3.2E-5 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.1E-17 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 Gene3D G3DSA:3.40.50.300 2 260 2.8E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 SUPERFAMILY SSF52540 3 264 2.19E-51 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 PANTHER PTHR24220 5 328 5.5E-222 T 21-04-2016 SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.9E-20 T 21-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 Pfam PF00005 ABC transporter 24 187 1.4E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1378 8adce7904a3f6e27c4c3586a0b3195ff 330 PANTHER PTHR24220:SF514 5 328 5.5E-222 T 21-04-2016 SDY_0209 ac45f31958aede1898f439f52ce4be17 181 Pfam PF07152 YaeQ protein 1 173 5.6E-68 T 21-04-2016 IPR009822 YaeQ SDY_0209 ac45f31958aede1898f439f52ce4be17 181 SMART SM01322 1 176 4.8E-100 T 21-04-2016 IPR009822 YaeQ SDY_0209 ac45f31958aede1898f439f52ce4be17 181 PIRSF PIRSF011484 1 180 5.5E-62 T 21-04-2016 IPR009822 YaeQ SDY_0209 ac45f31958aede1898f439f52ce4be17 181 Gene3D G3DSA:3.10.640.10 1 179 8.0E-78 T 21-04-2016 SDY_0209 ac45f31958aede1898f439f52ce4be17 181 PANTHER PTHR38784 1 181 4.4E-99 T 21-04-2016 SDY_0209 ac45f31958aede1898f439f52ce4be17 181 SUPERFAMILY SSF52980 2 178 1.13E-65 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_0209 ac45f31958aede1898f439f52ce4be17 181 PANTHER PTHR38784:SF1 1 181 4.4E-99 T 21-04-2016 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 PANTHER PTHR23117 1 177 2.1E-93 T 21-04-2016 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 SMART SM00072 2 179 7.9E-35 T 21-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 Pfam PF13238 AAA domain 6 138 4.9E-9 T 21-04-2016 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 SUPERFAMILY SSF52540 3 178 2.09E-32 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 PANTHER PTHR23117:SF8 1 177 2.1E-93 T 21-04-2016 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 34.165 T 21-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 2.4E-73 T 21-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 Gene3D G3DSA:3.40.50.300 73 149 1.8E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4122 6e0c5386cfffe7e307a62c40a44f2d63 185 Gene3D G3DSA:3.40.50.300 2 25 1.8E-14 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0113 049383c87ab3f6e97f9a4884f97c116f 121 Pfam PF04999 Cell division protein FtsL 25 119 2.3E-35 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SDY_0113 049383c87ab3f6e97f9a4884f97c116f 121 PANTHER PTHR37479:SF1 12 121 5.7E-45 T 21-04-2016 SDY_0113 049383c87ab3f6e97f9a4884f97c116f 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.85 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SDY_0113 049383c87ab3f6e97f9a4884f97c116f 121 PANTHER PTHR37479 12 121 5.7E-45 T 21-04-2016 SDY_0113 049383c87ab3f6e97f9a4884f97c116f 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 1.1E-28 T 21-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SDY_4357 7d73399fff716679256c0cd913c1757d 100 Gene3D G3DSA:3.30.1660.10 42 99 3.1E-15 T 21-04-2016 IPR025543 Dodecin-like SDY_4357 7d73399fff716679256c0cd913c1757d 100 PANTHER PTHR34156 11 99 5.6E-66 T 21-04-2016 SDY_4357 7d73399fff716679256c0cd913c1757d 100 PANTHER PTHR34156:SF4 11 99 5.6E-66 T 21-04-2016 SDY_4357 7d73399fff716679256c0cd913c1757d 100 SUPERFAMILY SSF159871 20 99 1.31E-18 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_4357 7d73399fff716679256c0cd913c1757d 100 Pfam PF07338 Protein of unknown function (DUF1471) 44 99 2.3E-18 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 PANTHER PTHR30128 10 173 2.3E-69 T 21-04-2016 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 Pfam PF00691 OmpA family 72 167 4.7E-22 T 21-04-2016 IPR006665 OmpA-like domain SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 21-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 1.4E-46 T 21-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 PRINTS PR01021 OMPA domain signature 103 118 2.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 PRINTS PR01021 OMPA domain signature 118 134 2.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 PRINTS PR01021 OMPA domain signature 73 95 2.4E-17 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 PANTHER PTHR30128:SF18 10 173 2.3E-69 T 21-04-2016 SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 Gene3D G3DSA:3.30.1330.60 68 172 9.6E-35 T 21-04-2016 IPR006665 OmpA-like domain SDY_0689 9fa77ec8f51a8574fe95c56e5c629a38 173 SUPERFAMILY SSF103088 60 172 2.09E-34 T 21-04-2016 IPR006665 OmpA-like domain SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.12 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.8E-40 T 21-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 PANTHER PTHR33445 1 156 9.5E-49 T 21-04-2016 SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 Gene3D G3DSA:1.20.5.620 62 122 6.2E-26 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 SUPERFAMILY SSF81573 63 121 1.7E-15 T 21-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SDY_4012 75e7ada38e15a23c696fd31fc2f9e66b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-61 T 21-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 SUPERFAMILY SSF54506 2 273 1.02E-56 T 21-04-2016 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 6.5E-105 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 PANTHER PTHR31689 1 272 7.6E-143 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.819 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 3 123 6.2E-35 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 152 267 4.6E-35 T 21-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 1 120 4.8E-50 T 21-04-2016 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 121 262 9.3E-53 T 21-04-2016 SDY_3936 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 21-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 3.7E-78 T 21-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 SUPERFAMILY SSF103481 43 148 9.68E-7 T 21-04-2016 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 Pfam PF00892 EamA-like transporter family 6 145 7.8E-21 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 Pfam PF00892 EamA-like transporter family 158 290 1.5E-21 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 SUPERFAMILY SSF103481 191 296 2.48E-13 T 21-04-2016 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 PANTHER PTHR22911 1 307 1.9E-73 T 21-04-2016 SDY_4498 ff1ebcb85ccb62a0978bb2690467957c 307 PANTHER PTHR22911:SF23 1 307 1.9E-73 T 21-04-2016 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 SUPERFAMILY SSF53850 25 425 2.9E-77 T 21-04-2016 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 PANTHER PTHR30061:SF7 1 438 1.1E-180 T 21-04-2016 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 368 6.5E-45 T 21-04-2016 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 21-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 Gene3D G3DSA:3.40.190.10 145 345 6.0E-42 T 21-04-2016 SDY_3601 915450e1f42bba0aae124435f968eb0e 438 PANTHER PTHR30061 1 438 1.1E-180 T 21-04-2016 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 Gene3D G3DSA:3.40.190.10 180 262 4.8E-23 T 21-04-2016 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.6E-17 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 PANTHER PTHR30427 2 300 1.8E-154 T 21-04-2016 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 Gene3D G3DSA:3.40.190.10 93 179 1.2E-16 T 21-04-2016 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 Gene3D G3DSA:1.10.10.10 4 82 1.2E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3056 3664e15362d9ed645ea799b3d883780e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 Pfam PF03466 LysR substrate binding domain 92 293 1.8E-43 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3056 3664e15362d9ed645ea799b3d883780e 311 SUPERFAMILY SSF46785 4 114 2.45E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3056 3664e15362d9ed645ea799b3d883780e 311 SUPERFAMILY SSF53850 93 294 2.61E-44 T 21-04-2016 SDY_3056 3664e15362d9ed645ea799b3d883780e 311 PANTHER PTHR30427:SF1 2 300 1.8E-154 T 21-04-2016 SDY_0321 38a74cb1c9ac64e2eec5a461bd6814cf 149 Pfam PF03477 ATP cone domain 50 136 2.6E-15 T 21-04-2016 IPR005144 ATP-cone domain SDY_0321 38a74cb1c9ac64e2eec5a461bd6814cf 149 PANTHER PTHR30455:SF2 2 149 5.5E-75 T 21-04-2016 SDY_0321 38a74cb1c9ac64e2eec5a461bd6814cf 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.9E-78 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SDY_0321 38a74cb1c9ac64e2eec5a461bd6814cf 149 PANTHER PTHR30455 2 149 5.5E-75 T 21-04-2016 SDY_0321 38a74cb1c9ac64e2eec5a461bd6814cf 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.122 T 21-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 21-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 PANTHER PTHR24322 152 186 1.4E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 PANTHER PTHR24322 11 136 1.4E-18 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 Gene3D G3DSA:3.40.50.720 9 239 3.4E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 SUPERFAMILY SSF51735 9 239 4.13E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 3.0E-22 T 21-04-2016 SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-11 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-11 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1547 e24b22186b29bbe648b6dc199c53d44b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.5E-11 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 SUPERFAMILY SSF55120 95 316 4.32E-67 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 Pfam PF00849 RNA pseudouridylate synthase 102 249 1.7E-29 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 PANTHER PTHR11079 1 317 1.9E-166 T 21-04-2016 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 SMART SM00363 20 79 9.9E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 SUPERFAMILY SSF55174 19 70 4.56E-9 T 21-04-2016 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 316 8.0E-101 T 21-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 PANTHER PTHR11079:SF84 1 317 1.9E-166 T 21-04-2016 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 Gene3D G3DSA:3.10.290.10 20 68 1.5E-7 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_2065 a5499e6c8a2a8807fdfff2914bb9495e 319 Pfam PF01479 S4 domain 20 66 1.7E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 PIRSF PIRSF028788 1 205 9.6E-56 T 21-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 Gene3D G3DSA:3.30.1460.30 5 107 3.7E-34 T 21-04-2016 IPR007076 TfoX, N-terminal SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 Pfam PF04993 TfoX N-terminal domain 14 106 9.1E-26 T 21-04-2016 IPR007076 TfoX, N-terminal SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 PANTHER PTHR36121:SF1 2 209 1.6E-59 T 21-04-2016 SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 Gene3D G3DSA:1.10.150.20 117 205 2.3E-29 T 21-04-2016 SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 Pfam PF04994 TfoX C-terminal domain 116 194 1.5E-26 T 21-04-2016 IPR007077 TfoX, C-terminal SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 SUPERFAMILY SSF159894 13 107 1.44E-26 T 21-04-2016 SDY_0934 6361f275c91f2feefb9053d6ca87cca6 209 PANTHER PTHR36121 2 209 1.6E-59 T 21-04-2016 SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 Gene3D G3DSA:3.40.50.720 185 301 1.4E-13 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 Gene3D G3DSA:3.90.180.10 1 184 9.4E-22 T 21-04-2016 IPR011032 GroES-like SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 2.5E-5 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 SUPERFAMILY SSF51735 169 330 3.51E-15 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 PANTHER PTHR11695:SF551 14 373 4.1E-108 T 21-04-2016 SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 SUPERFAMILY SSF50129 3 189 1.14E-24 T 21-04-2016 IPR011032 GroES-like SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 PANTHER PTHR11695 14 373 4.1E-108 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_4317 99311c4040c67eccd1f2a1e2b9ca3892 409 Pfam PF00107 Zinc-binding dehydrogenase 187 325 1.8E-10 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_1034 13b9f39d8eb471e07abed1c450160993 211 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.2E-14 T 21-04-2016 IPR013130 Ferric reductase transmembrane component-like domain SDY_1034 13b9f39d8eb471e07abed1c450160993 211 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 203 24.374 T 21-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 SDY_1034 13b9f39d8eb471e07abed1c450160993 211 PANTHER PTHR36964 1 208 2.2E-81 T 21-04-2016 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 SUPERFAMILY SSF46689 258 306 9.41E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 SMART SM00342 222 305 6.9E-32 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Pfam PF12833 Helix-turn-helix domain 229 305 1.2E-21 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 PANTHER PTHR11019 50 312 2.3E-177 T 21-04-2016 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 SUPERFAMILY SSF51182 32 180 3.38E-15 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 301 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Pfam PF02311 AraC-like ligand binding domain 53 170 4.2E-23 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Gene3D G3DSA:2.60.120.280 52 192 5.7E-15 T 21-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Gene3D G3DSA:1.10.10.60 259 306 8.2E-16 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 31 312 51.921 T 21-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 SUPERFAMILY SSF46689 207 257 9.86E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 PANTHER PTHR11019:SF107 50 312 2.3E-177 T 21-04-2016 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 305 4.3E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 289 4.3E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3840 fdf9ea8932e6e698b762307999e2f488 312 Gene3D G3DSA:1.10.10.60 201 258 1.1E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2689 9923c83945e4846ea37623f333052be1 212 Pfam PF00551 Formyl transferase 1 181 3.2E-68 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_2689 9923c83945e4846ea37623f333052be1 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.771 T 21-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SDY_2689 9923c83945e4846ea37623f333052be1 212 Gene3D G3DSA:3.40.50.170 1 199 1.4E-71 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_2689 9923c83945e4846ea37623f333052be1 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 21-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_2689 9923c83945e4846ea37623f333052be1 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 8.6E-85 T 21-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SDY_2689 9923c83945e4846ea37623f333052be1 212 SUPERFAMILY SSF53328 1 205 7.98E-67 T 21-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SDY_2689 9923c83945e4846ea37623f333052be1 212 PANTHER PTHR10520 1 193 3.9E-107 T 21-04-2016 SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 SUPERFAMILY SSF51261 12 167 7.67E-56 T 21-04-2016 IPR011055 Duplicated hybrid motif SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.9E-49 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 PANTHER PTHR30175 1 118 8.7E-58 T 21-04-2016 SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 Gene3D G3DSA:2.70.70.10 14 167 3.1E-60 T 21-04-2016 SDY_2614 9b93a21133deef1080b6ca9976e83e18 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.0E-51 T 21-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SDY_1069 2b67a2f58015de4ca52eea646b405419 237 Pfam PF13276 HTH-like domain 5 47 3.7E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_1069 2b67a2f58015de4ca52eea646b405419 237 PANTHER PTHR32552 2 235 3.7E-59 T 21-04-2016 SDY_1069 2b67a2f58015de4ca52eea646b405419 237 SUPERFAMILY SSF53098 65 229 4.55E-35 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1069 2b67a2f58015de4ca52eea646b405419 237 Gene3D G3DSA:3.30.420.10 66 226 7.5E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1069 2b67a2f58015de4ca52eea646b405419 237 Pfam PF00665 Integrase core domain 72 186 8.9E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 SUPERFAMILY SSF50800 147 264 1.46E-17 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain SDY_0920 f415848386002cd8e9c465b6f474b28c 369 SUPERFAMILY SSF50800 2 50 1.46E-17 T 21-04-2016 IPR011037 Pyruvate kinase-like, insert domain SDY_0920 f415848386002cd8e9c465b6f474b28c 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 2.4E-29 T 21-04-2016 IPR005303 MOSC, N-terminal beta barrel SDY_0920 f415848386002cd8e9c465b6f474b28c 369 Gene3D G3DSA:3.10.20.30 279 367 4.2E-22 T 21-04-2016 IPR012675 Beta-grasp domain SDY_0920 f415848386002cd8e9c465b6f474b28c 369 PANTHER PTHR14237 1 267 2.9E-101 T 21-04-2016 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 SUPERFAMILY SSF54292 284 367 3.8E-20 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 SUPERFAMILY SSF141673 4 132 5.62E-28 T 21-04-2016 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 Pfam PF03473 MOSC domain 139 262 8.1E-31 T 21-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 21-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SDY_0920 f415848386002cd8e9c465b6f474b28c 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 362 9.3E-14 T 21-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SDY_0368 96e29ffbff167f3acbfc90bf529f4834 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 364 0.0 T 21-04-2016 IPR011673 Protein of unknown function DUF1615 SDY_0368 96e29ffbff167f3acbfc90bf529f4834 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 363 1.4E-148 T 21-04-2016 IPR011673 Protein of unknown function DUF1615 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 Pfam PF01497 Periplasmic binding protein 79 307 2.4E-32 T 21-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 Gene3D G3DSA:3.40.50.1980 198 330 4.0E-26 T 21-04-2016 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 PANTHER PTHR30535 76 329 1.5E-72 T 21-04-2016 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 PANTHER PTHR30535:SF4 76 329 1.5E-72 T 21-04-2016 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 SUPERFAMILY SSF53807 76 330 1.06E-57 T 21-04-2016 SDY_3552 61d5877c449639f76aeced1c2a9aa823 330 Gene3D G3DSA:3.40.50.1980 76 196 2.6E-30 T 21-04-2016 SDY_4055 76153196d4db509c569fdd75b93db872 257 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 4 183 2.1E-47 T 21-04-2016 IPR002654 Glycosyl transferase, family 25 SDY_4055 76153196d4db509c569fdd75b93db872 257 PANTHER PTHR10730:SF27 5 104 6.9E-17 T 21-04-2016 SDY_4055 76153196d4db509c569fdd75b93db872 257 PANTHER PTHR10730 5 104 6.9E-17 T 21-04-2016 SDY_4580 55dfc29727e38385f7aea304fee5fa95 117 PANTHER PTHR30629:SF3 1 117 5.5E-51 T 21-04-2016 SDY_4580 55dfc29727e38385f7aea304fee5fa95 117 PANTHER PTHR30629 1 117 5.5E-51 T 21-04-2016 SDY_4580 55dfc29727e38385f7aea304fee5fa95 117 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 2.7E-21 T 21-04-2016 IPR025166 Domain of unknown function DUF4102 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 SUPERFAMILY SSF69189 285 378 5.3E-25 T 21-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 PANTHER PTHR21581:SF4 15 400 4.0E-303 T 21-04-2016 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 PANTHER PTHR21581 15 400 4.0E-303 T 21-04-2016 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 1.1E-23 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 Gene3D G3DSA:3.40.710.10 27 283 5.9E-98 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 266 9.4E-102 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 Gene3D G3DSA:2.60.410.10 285 376 1.0E-30 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 SMART SM00936 285 376 7.3E-35 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_0841 5c0d2f70eae79bfcd0bf2a90609738a1 400 SUPERFAMILY SSF56601 14 285 1.05E-82 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 Gene3D G3DSA:3.40.50.1820 3 251 1.2E-55 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 PANTHER PTHR10992 1 255 1.3E-137 T 21-04-2016 SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 5.5E-119 T 21-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.889 T 21-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 SUPERFAMILY SSF53474 3 250 1.13E-46 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 PANTHER PTHR10992:SF812 1 255 1.3E-137 T 21-04-2016 SDY_3663 6d1ffa4db82ec37f522b4323d8337305 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 7.0E-32 T 21-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 SMART SM00479 7 180 1.2E-21 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 PANTHER PTHR11046 3 181 2.5E-129 T 21-04-2016 SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 PANTHER PTHR11046:SF1 3 181 2.5E-129 T 21-04-2016 SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.336 T 21-04-2016 IPR022894 Oligoribonuclease GO:0016788 SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 Pfam PF00929 Exonuclease 9 170 2.2E-37 T 21-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 Gene3D G3DSA:3.30.420.10 4 180 4.3E-72 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4430 cc0fe12bf30642df7d3d635784fe57c9 181 SUPERFAMILY SSF53098 3 180 3.89E-49 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0905 84703d74a8dbd2ac6d9c6af353e49e94 249 SUPERFAMILY SSF48317 9 238 4.58E-38 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0905 84703d74a8dbd2ac6d9c6af353e49e94 249 Gene3D G3DSA:1.20.144.10 35 217 5.3E-13 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0905 84703d74a8dbd2ac6d9c6af353e49e94 249 SMART SM00014 106 222 3.6E-23 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0905 84703d74a8dbd2ac6d9c6af353e49e94 249 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 13 245 41.811 T 21-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 SDY_0905 84703d74a8dbd2ac6d9c6af353e49e94 249 Pfam PF01569 PAP2 superfamily 147 219 1.7E-8 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 SMART SM00257 122 166 9.3E-12 T 21-04-2016 IPR018392 LysM domain SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 PANTHER PTHR21666:SF222 233 377 2.1E-57 T 21-04-2016 SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 PANTHER PTHR21666 233 377 2.1E-57 T 21-04-2016 SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01551 Peptidase family M23 279 372 1.2E-31 T 21-04-2016 IPR016047 Peptidase M23 SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:3.10.350.10 121 165 6.7E-12 T 21-04-2016 IPR018392 LysM domain SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 SUPERFAMILY SSF51261 122 376 1.36E-53 T 21-04-2016 IPR011055 Duplicated hybrid motif SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01476 LysM domain 123 165 2.2E-10 T 21-04-2016 IPR018392 LysM domain SDY_2941 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:2.70.70.10 244 377 4.1E-42 T 21-04-2016 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 SUPERFAMILY SSF160113 55 96 9.94E-13 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 Pfam PF07411 Domain of unknown function (DUF1508) 61 95 8.1E-16 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 3.4E-22 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 PANTHER PTHR40606:SF1 2 95 5.6E-61 T 21-04-2016 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 PANTHER PTHR40606 2 95 5.6E-61 T 21-04-2016 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 SUPERFAMILY SSF160113 1 57 7.46E-20 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 Gene3D G3DSA:3.30.160.160 3 49 3.9E-23 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 DY_2185a 48c434c675abb5f6d22fc738fca26507 99 Gene3D G3DSA:3.30.160.160 55 95 1.2E-18 T 21-04-2016 IPR010879 Domain of unknown function DUF1508 SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 SUPERFAMILY SSF54523 7 113 1.05E-22 T 21-04-2016 SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 1.3E-10 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 PANTHER PTHR30093 1 85 1.5E-26 T 21-04-2016 SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.8E-9 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_0138 f9a6af6cede719679af05924cb07d4f9 146 Gene3D G3DSA:3.30.700.10 7 136 5.7E-33 T 21-04-2016 SDY_1191 10d7fde2f19a70850022f8194841d558 119 SUPERFAMILY SSF63592 4 101 1.31E-39 T 21-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 SDY_1191 10d7fde2f19a70850022f8194841d558 119 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 4.9E-41 T 21-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 SDY_1191 10d7fde2f19a70850022f8194841d558 119 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 101 5.0E-47 T 21-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 SDY_1191 10d7fde2f19a70850022f8194841d558 119 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 4 107 28.278 T 21-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 SUPERFAMILY SSF102405 78 283 1.27E-40 T 21-04-2016 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 Pfam PF02481 DNA recombination-mediator protein A 67 274 1.1E-70 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 PANTHER PTHR32039 60 374 1.7E-126 T 21-04-2016 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 PANTHER PTHR32039:SF8 60 374 1.7E-126 T 21-04-2016 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 283 3.2E-89 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SDY_3462 e08942ea6898693c38e22ae9659c54b0 374 Gene3D G3DSA:3.40.50.450 110 252 2.2E-9 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 SUPERFAMILY SSF53822 76 326 1.24E-39 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3259 650c735f67d45148e65ffe434c2e0226 327 Pfam PF13377 Periplasmic binding protein-like domain 168 326 9.3E-31 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 Gene3D G3DSA:3.40.50.2300 76 170 3.1E-7 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 PANTHER PTHR30146:SF28 1 327 5.0E-193 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 Gene3D G3DSA:3.40.50.2300 171 305 4.4E-35 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 SMART SM00354 1 74 9.6E-24 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 SUPERFAMILY SSF47413 3 51 7.13E-12 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 Gene3D G3DSA:1.10.260.40 1 58 1.2E-19 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 PANTHER PTHR30146 1 327 5.0E-193 T 21-04-2016 SDY_3259 650c735f67d45148e65ffe434c2e0226 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.4E-18 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 PANTHER PTHR21235 1 258 4.3E-120 T 21-04-2016 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.0E-118 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 SUPERFAMILY SSF51366 1 257 5.97E-74 T 21-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 Gene3D G3DSA:3.20.20.70 4 257 1.8E-89 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 PANTHER PTHR21235:SF2 1 258 4.3E-120 T 21-04-2016 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.112 T 21-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SDY_2216 38fca6bd1d4b716adc63216e32c78d0b 258 Pfam PF00977 Histidine biosynthesis protein 5 239 2.7E-79 T 21-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SDY_1659 4339949f13355f82cffd3b3591f3ed3d 65 Pfam PF17073 Two-component-system connector protein 1 65 1.0E-47 T 21-04-2016 IPR031411 Two-component-system connector protein SafA SDY_0047 0a57b89706884c058e2255d876a18257 313 PANTHER PTHR22749:SF0 1 309 7.7E-141 T 21-04-2016 SDY_0047 0a57b89706884c058e2255d876a18257 313 Pfam PF06574 FAD synthetase 13 168 4.3E-58 T 21-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SDY_0047 0a57b89706884c058e2255d876a18257 313 SUPERFAMILY SSF52374 17 177 5.91E-33 T 21-04-2016 SDY_0047 0a57b89706884c058e2255d876a18257 313 Pfam PF01687 Riboflavin kinase 185 307 4.1E-37 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SDY_0047 0a57b89706884c058e2255d876a18257 313 SMART SM00904 184 308 1.2E-61 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SDY_0047 0a57b89706884c058e2255d876a18257 313 PIRSF PIRSF004491 1 312 6.7E-105 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SDY_0047 0a57b89706884c058e2255d876a18257 313 SUPERFAMILY SSF82114 175 308 3.27E-43 T 21-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SDY_0047 0a57b89706884c058e2255d876a18257 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 1.8E-123 T 21-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SDY_0047 0a57b89706884c058e2255d876a18257 313 Gene3D G3DSA:3.40.50.620 1 180 3.2E-66 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0047 0a57b89706884c058e2255d876a18257 313 Gene3D G3DSA:2.40.30.30 181 307 4.1E-39 T 21-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SDY_0047 0a57b89706884c058e2255d876a18257 313 PANTHER PTHR22749 1 309 7.7E-141 T 21-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SDY_3386 e665116056ef0f5451a45804e513907b 284 SUPERFAMILY SSF52540 2 151 6.8E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3386 e665116056ef0f5451a45804e513907b 284 PANTHER PTHR30448 1 283 2.0E-157 T 21-04-2016 SDY_3386 e665116056ef0f5451a45804e513907b 284 PANTHER PTHR30448:SF0 1 283 2.0E-157 T 21-04-2016 SDY_3386 e665116056ef0f5451a45804e513907b 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.009 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 SDY_3386 e665116056ef0f5451a45804e513907b 284 PIRSF PIRSF005052 1 284 2.9E-114 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 SDY_3386 e665116056ef0f5451a45804e513907b 284 Gene3D G3DSA:3.40.50.300 2 150 6.6E-13 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3386 e665116056ef0f5451a45804e513907b 284 Pfam PF03668 P-loop ATPase protein family 1 282 4.6E-147 T 21-04-2016 IPR005337 RapZ-like family GO:0005524 SDY_2496 9da574ce2349e8981990aed845cc441d 184 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 5.9E-26 T 21-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SDY_2496 9da574ce2349e8981990aed845cc441d 184 PANTHER PTHR11124:SF14 1 164 5.2E-66 T 21-04-2016 SDY_2496 9da574ce2349e8981990aed845cc441d 184 SUPERFAMILY SSF56300 2 164 1.9E-39 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_2496 9da574ce2349e8981990aed845cc441d 184 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 21-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- SDY_2496 9da574ce2349e8981990aed845cc441d 184 Gene3D G3DSA:3.60.21.10 2 164 1.7E-49 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_2496 9da574ce2349e8981990aed845cc441d 184 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 170 2.8E-52 T 21-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SDY_2496 9da574ce2349e8981990aed845cc441d 184 PANTHER PTHR11124 1 164 5.2E-66 T 21-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 PANTHER PTHR11624:SF67 114 142 2.2E-36 T 21-04-2016 SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 Gene3D G3DSA:3.40.50.970 34 142 8.5E-45 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 SUPERFAMILY SSF52518 35 142 2.55E-36 T 21-04-2016 IPR029061 Thiamin diphosphate-binding fold SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 PANTHER PTHR11624:SF67 23 96 2.2E-36 T 21-04-2016 SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 PANTHER PTHR11624 114 142 2.2E-36 T 21-04-2016 IPR033247 Transketolase family SDY_P181 50b1b11caf87e82ee9b7f191d1ceca54 142 PANTHER PTHR11624 23 96 2.2E-36 T 21-04-2016 IPR033247 Transketolase family SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 Gene3D G3DSA:3.90.79.10 9 183 4.6E-42 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 Pfam PF00293 NUDIX domain 46 150 5.2E-13 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 SUPERFAMILY SSF55811 3 182 7.58E-38 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 PANTHER PTHR11839:SF12 3 183 5.0E-109 T 21-04-2016 SDY_3681 85f8dcc9b36d621be2c5ff2602c469ed 186 PANTHER PTHR11839 3 183 5.0E-109 T 21-04-2016 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 Hamap MF_00616 Ureidoglycolate lyase [allA]. 1 160 37.868 T 21-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 SUPERFAMILY SSF51182 2 156 2.0E-54 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 PANTHER PTHR21221:SF2 1 160 3.8E-107 T 21-04-2016 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 PANTHER PTHR21221 1 160 3.8E-107 T 21-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 PIRSF PIRSF017306 1 160 5.7E-109 T 21-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 Pfam PF04115 Ureidoglycolate lyase 2 154 1.2E-45 T 21-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 SDY_0397 bc1e5610375e5b8c177351ff78cf0a56 160 Gene3D G3DSA:2.60.120.480 2 155 5.2E-53 T 21-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 SDY_1324 75822af90e0c9c53104d192cf810bb64 125 Pfam PF03400 IS1 transposase 1 125 1.0E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1324 75822af90e0c9c53104d192cf810bb64 125 PANTHER PTHR33293 1 124 2.7E-41 T 21-04-2016 SDY_0404 337f72e949520b431eba747abf84e7ed 208 Gene3D G3DSA:3.40.50.1110 29 205 6.9E-55 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain SDY_0404 337f72e949520b431eba747abf84e7ed 208 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 21-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 SDY_0404 337f72e949520b431eba747abf84e7ed 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 187 3.0E-24 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain SDY_0404 337f72e949520b431eba747abf84e7ed 208 PANTHER PTHR30383 26 201 8.1E-49 T 21-04-2016 SDY_0404 337f72e949520b431eba747abf84e7ed 208 SUPERFAMILY SSF52266 29 204 8.03E-51 T 21-04-2016 IPR013830 SGNH hydrolase-type esterase domain SDY_0404 337f72e949520b431eba747abf84e7ed 208 PANTHER PTHR30383:SF5 26 201 8.1E-49 T 21-04-2016 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 PANTHER PTHR13794 5 335 2.8E-149 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 101 126 - T 21-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 Gene3D G3DSA:3.20.20.120 131 333 3.3E-61 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 Gene3D G3DSA:3.30.390.10 14 117 1.3E-47 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 Pfam PF13378 Enolase C-terminal domain-like 147 332 7.1E-26 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 SUPERFAMILY SSF51604 130 324 3.54E-51 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 126 5.7E-32 T 21-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 SUPERFAMILY SSF54826 13 126 2.12E-33 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 187 218 - T 21-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 PANTHER PTHR13794:SF60 5 335 2.8E-149 T 21-04-2016 SDY_1403 e77d416639fe60f43dcbccc5c1efae3c 335 SMART SM00922 144 237 1.3E-17 T 21-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SDY_4221 bef7ac60e0ea2a5a53bc0248f7ebe0c3 222 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 23 216 4.4E-61 T 21-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB SDY_4221 bef7ac60e0ea2a5a53bc0248f7ebe0c3 222 Gene3D G3DSA:2.40.360.10 26 221 9.1E-80 T 21-04-2016 IPR023373 YmcC-like domain SDY_4221 bef7ac60e0ea2a5a53bc0248f7ebe0c3 222 SUPERFAMILY SSF159270 30 218 8.37E-56 T 21-04-2016 IPR023373 YmcC-like domain SDY_2076 14ea2a8c789765f3dbf5913288bfee50 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 79 7.3E-25 T 21-04-2016 IPR005648 Flagellar hook capping protein SDY_2076 14ea2a8c789765f3dbf5913288bfee50 231 PANTHER PTHR30435 17 216 6.5E-66 T 21-04-2016 SDY_2076 14ea2a8c789765f3dbf5913288bfee50 231 PANTHER PTHR30435:SF15 17 216 6.5E-66 T 21-04-2016 SDY_2076 14ea2a8c789765f3dbf5913288bfee50 231 Pfam PF13860 FlgD Ig-like domain 119 189 3.9E-21 T 21-04-2016 IPR025965 FlgD Ig-like domain SDY_2076 14ea2a8c789765f3dbf5913288bfee50 231 Pfam PF13861 FlgD Tudor-like domain 87 228 1.2E-15 T 21-04-2016 IPR025963 FlgD Tudor-like domain SDY_3222 dbdc9d6e38065944780b02e8badd199f 85 PIRSF PIRSF002855 1 82 2.7E-25 T 21-04-2016 IPR016367 Murein-lipoprotein SDY_3222 dbdc9d6e38065944780b02e8badd199f 85 PANTHER PTHR38763 1 85 1.2E-27 T 21-04-2016 SDY_3222 dbdc9d6e38065944780b02e8badd199f 85 Pfam PF04728 Lipoprotein leucine-zipper 25 71 2.7E-13 T 21-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 SDY_3222 dbdc9d6e38065944780b02e8badd199f 85 Gene3D G3DSA:1.20.5.190 24 69 1.9E-6 T 21-04-2016 SDY_3222 dbdc9d6e38065944780b02e8badd199f 85 SUPERFAMILY SSF58042 24 72 2.88E-18 T 21-04-2016 SDY_0932 38afc2bd594683b06cd4f5bf376ae3e8 261 Gene3D G3DSA:3.30.420.10 66 226 1.2E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0932 38afc2bd594683b06cd4f5bf376ae3e8 261 SUPERFAMILY SSF53098 65 229 1.67E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0932 38afc2bd594683b06cd4f5bf376ae3e8 261 Pfam PF00665 Integrase core domain 72 186 2.5E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0932 38afc2bd594683b06cd4f5bf376ae3e8 261 Pfam PF13276 HTH-like domain 5 47 4.4E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0932 38afc2bd594683b06cd4f5bf376ae3e8 261 PANTHER PTHR32552 2 235 3.2E-61 T 21-04-2016 SDY_3203 3ffefe6260a0c7ae6bb0ce31d0c5deb0 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.197 T 21-04-2016 IPR009576 Biofilm formation YgiB SDY_3203 3ffefe6260a0c7ae6bb0ce31d0c5deb0 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 1.7E-56 T 21-04-2016 IPR009576 Biofilm formation YgiB SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 7.4E-162 T 21-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 PANTHER PTHR22976:SF17 1 377 1.4E-238 T 21-04-2016 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 SUPERFAMILY SSF102114 36 363 4.84E-53 T 21-04-2016 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 Pfam PF04055 Radical SAM superfamily 82 220 5.0E-9 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 SMART SM00876 258 361 2.8E-27 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 7.2E-21 T 21-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 Gene3D G3DSA:3.20.20.70 36 361 1.1E-46 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3737 24accbe4d161cdeb2ace9317aef0e1c4 377 PANTHER PTHR22976 1 377 1.4E-238 T 21-04-2016 SDY_2516 d8ce49eae24914f176bff2234f79b2f6 219 Pfam PF09335 SNARE associated Golgi protein 49 176 6.3E-27 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_2516 d8ce49eae24914f176bff2234f79b2f6 219 PANTHER PTHR30353:SF0 1 219 1.3E-102 T 21-04-2016 SDY_2516 d8ce49eae24914f176bff2234f79b2f6 219 PANTHER PTHR30353 1 219 1.3E-102 T 21-04-2016 IPR032818 DedA family SDY_2355 029a763182009911fda1aebb09a7b4e4 230 Pfam PF04239 Protein of unknown function (DUF421) 104 170 3.7E-15 T 21-04-2016 IPR007353 Protein of unknown function DUF421 SDY_2355 029a763182009911fda1aebb09a7b4e4 230 Gene3D G3DSA:3.30.240.20 95 167 1.0E-22 T 21-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SDY_2355 029a763182009911fda1aebb09a7b4e4 230 PANTHER PTHR34582 4 228 2.2E-101 T 21-04-2016 SDY_2355 029a763182009911fda1aebb09a7b4e4 230 PANTHER PTHR34582:SF6 4 228 2.2E-101 T 21-04-2016 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 PIRSF PIRSF006078 1 377 2.9E-141 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 Gene3D G3DSA:3.90.1510.10 42 274 1.2E-100 T 21-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 SUPERFAMILY SSF110738 1 375 2.22E-142 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 8.6E-175 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 Pfam PF02595 Glycerate kinase family 3 373 3.4E-150 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 PANTHER PTHR21599 1 380 1.0E-279 T 21-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SDY_3318 6d6d198973066c5df9c36a821f33825b 381 PANTHER PTHR21599:SF4 1 380 1.0E-279 T 21-04-2016 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 Gene3D G3DSA:3.40.50.720 165 226 7.4E-15 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 173 215 2.9E-6 T 21-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 Pfam PF13840 ACT domain 94 154 7.8E-10 T 21-04-2016 IPR027795 GATS-like ACT domain SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 PANTHER PTHR21499 1 172 1.5E-72 T 21-04-2016 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 PANTHER PTHR21499:SF1 1 172 1.5E-72 T 21-04-2016 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 Pfam PF01842 ACT domain 25 77 1.1E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 SUPERFAMILY SSF55021 4 82 1.76E-23 T 21-04-2016 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 SUPERFAMILY SSF55021 84 177 1.91E-23 T 21-04-2016 SDY_P003 0ea6a62403eb7293da262a7d1bac035e 227 SUPERFAMILY SSF51735 165 226 1.26E-10 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1778 ccb673c6d54b7644bc59876dece0e2e7 131 PANTHER PTHR33293:SF1 6 126 4.9E-23 T 21-04-2016 SDY_1778 ccb673c6d54b7644bc59876dece0e2e7 131 Pfam PF03400 IS1 transposase 2 131 2.6E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1778 ccb673c6d54b7644bc59876dece0e2e7 131 PANTHER PTHR33293 6 126 4.9E-23 T 21-04-2016 SDY_2318 ccb673c6d54b7644bc59876dece0e2e7 131 PANTHER PTHR33293:SF1 6 126 4.9E-23 T 21-04-2016 SDY_2318 ccb673c6d54b7644bc59876dece0e2e7 131 Pfam PF03400 IS1 transposase 2 131 2.6E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2318 ccb673c6d54b7644bc59876dece0e2e7 131 PANTHER PTHR33293 6 126 4.9E-23 T 21-04-2016 SDY_3456 d489c33dabc26ed11881e90a2ea06be1 184 Gene3D G3DSA:2.160.10.10 7 176 1.3E-44 T 21-04-2016 SDY_3456 d489c33dabc26ed11881e90a2ea06be1 184 PANTHER PTHR13061 5 182 7.7E-73 T 21-04-2016 SDY_3456 d489c33dabc26ed11881e90a2ea06be1 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 3.7E-5 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_3456 d489c33dabc26ed11881e90a2ea06be1 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_3456 d489c33dabc26ed11881e90a2ea06be1 184 SUPERFAMILY SSF51161 4 176 2.91E-45 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 PANTHER PTHR22911 3 294 4.1E-94 T 21-04-2016 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.1E-92 T 21-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 SUPERFAMILY SSF103481 35 130 4.71E-6 T 21-04-2016 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 PANTHER PTHR22911:SF27 3 294 4.1E-94 T 21-04-2016 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 Pfam PF00892 EamA-like transporter family 139 274 8.2E-12 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 Pfam PF00892 EamA-like transporter family 2 128 9.0E-8 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3916 3cb583a0dac4b17ca0c60e230168f9c7 299 SUPERFAMILY SSF103481 199 278 4.84E-10 T 21-04-2016 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 448 9.8E-153 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 Gene3D G3DSA:3.40.1160.10 3 53 2.7E-59 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 Gene3D G3DSA:3.40.1160.10 106 294 2.7E-59 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 SUPERFAMILY SSF55021 372 448 2.46E-13 T 21-04-2016 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 6.6E-139 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 SUPERFAMILY SSF55021 297 393 4.91E-17 T 21-04-2016 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 PIRSF PIRSF000726 2 449 4.4E-166 T 21-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 21-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 PANTHER PTHR21499:SF3 4 449 5.1E-147 T 21-04-2016 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 PANTHER PTHR21499 4 449 5.1E-147 T 21-04-2016 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 SUPERFAMILY SSF53633 4 292 7.07E-75 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_4227 70433e8ab757947a7ba134af54a7ce06 449 Pfam PF00696 Amino acid kinase family 4 277 5.7E-47 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 PANTHER PTHR33175 2 99 7.3E-58 T 21-04-2016 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 21-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 2 93 3.4E-36 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 21-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 21-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 PANTHER PTHR33175:SF2 2 99 7.3E-58 T 21-04-2016 SDY_1807 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 21-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 4.8E-108 T 21-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 PANTHER PTHR30352:SF9 1 246 1.6E-158 T 21-04-2016 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Pfam PF04055 Radical SAM superfamily 24 178 1.4E-31 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 5.9E-18 T 21-04-2016 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Gene3D G3DSA:3.80.30.10 69 245 3.5E-71 T 21-04-2016 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 PANTHER PTHR30352 1 246 1.6E-158 T 21-04-2016 SDY_2359 060a51c91c15fb6764d5ea2d7f7ffcc4 246 SUPERFAMILY SSF102114 23 217 2.55E-24 T 21-04-2016 SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 PANTHER PTHR11695 14 378 6.3E-199 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 PANTHER PTHR11695:SF551 14 378 6.3E-199 T 21-04-2016 SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 Gene3D G3DSA:3.40.50.720 181 312 1.2E-20 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 SUPERFAMILY SSF51735 157 336 1.46E-18 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 SUPERFAMILY SSF50129 3 188 2.67E-24 T 21-04-2016 IPR011032 GroES-like SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 Pfam PF00107 Zinc-binding dehydrogenase 186 329 5.2E-18 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 Gene3D G3DSA:3.90.180.10 4 180 2.5E-16 T 21-04-2016 IPR011032 GroES-like SDY_3145 ad587979b847eb8ab7d943455f4c20b6 425 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 97 1.1E-6 T 21-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SDY_0353 a0bf9b2b40d348c3690ab02cfc704b0f 225 Pfam PF07302 AroM protein 5 223 8.8E-70 T 21-04-2016 IPR010843 Uncharacterised protein family AroM SDY_0353 a0bf9b2b40d348c3690ab02cfc704b0f 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 2.0E-123 T 21-04-2016 IPR010843 Uncharacterised protein family AroM SDY_1313 96fa91cba31aa4ba41764d7c1c1749e1 100 SUPERFAMILY SSF46689 1 93 9.68E-20 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1313 96fa91cba31aa4ba41764d7c1c1749e1 100 PANTHER PTHR33215 1 100 9.8E-61 T 21-04-2016 SDY_1313 96fa91cba31aa4ba41764d7c1c1749e1 100 PANTHER PTHR33215:SF4 1 100 9.8E-61 T 21-04-2016 SDY_1313 96fa91cba31aa4ba41764d7c1c1749e1 100 Gene3D G3DSA:1.10.10.60 7 90 2.5E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1313 96fa91cba31aa4ba41764d7c1c1749e1 100 Pfam PF01527 Transposase 2 74 4.1E-13 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 PANTHER PTHR10657:SF13 1 175 1.8E-271 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 PANTHER PTHR10657:SF13 203 516 1.8E-271 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 Pfam PF13145 PPIC-type PPIASE domain 247 369 4.1E-24 T 21-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 PANTHER PTHR10657 1 175 1.8E-271 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 PANTHER PTHR10657 203 516 1.8E-271 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 Gene3D G3DSA:3.10.50.40 258 379 1.6E-29 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 Pfam PF13624 SurA N-terminal domain 1 165 2.5E-54 T 21-04-2016 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 Gene3D G3DSA:1.10.3120.10 43 122 9.0E-4 T 21-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 SUPERFAMILY SSF109998 203 239 4.32E-38 T 21-04-2016 IPR027304 Trigger factor/SurA domain SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 SUPERFAMILY SSF109998 39 169 4.32E-38 T 21-04-2016 IPR027304 Trigger factor/SurA domain SDY_0291 f79af9f92cb9d03fe91a6ebd7cd69ba6 623 SUPERFAMILY SSF54534 225 355 3.34E-23 T 21-04-2016 SDY_1038a ea1c5f7789be22fe0b4332b05051ec14 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1038a ea1c5f7789be22fe0b4332b05051ec14 90 PANTHER PTHR33293 1 89 4.2E-20 T 21-04-2016 SDY_1038a ea1c5f7789be22fe0b4332b05051ec14 90 PANTHER PTHR33293:SF2 1 89 4.2E-20 T 21-04-2016 SDY_1038a ea1c5f7789be22fe0b4332b05051ec14 90 Pfam PF03811 InsA N-terminal domain 1 35 1.7E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0880 d307ccb7224a87bc3686037bd68ee470 69 PANTHER PTHR37531 2 67 2.6E-28 T 21-04-2016 SDY_0880 d307ccb7224a87bc3686037bd68ee470 69 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 8.8E-17 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SDY_0880 d307ccb7224a87bc3686037bd68ee470 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 2.2E-19 T 21-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 SDY_0880 d307ccb7224a87bc3686037bd68ee470 69 PANTHER PTHR37531:SF1 2 67 2.6E-28 T 21-04-2016 SDY_2045 c65ae3b77f5a90c598beb8fb073593d0 213 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 212 2.9E-65 T 21-04-2016 IPR014094 Penicillin-binding protein activator LpoB SDY_2045 c65ae3b77f5a90c598beb8fb073593d0 213 PANTHER PTHR40593 2 213 1.3E-103 T 21-04-2016 SDY_2045 c65ae3b77f5a90c598beb8fb073593d0 213 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 210 8.1E-56 T 21-04-2016 IPR014094 Penicillin-binding protein activator LpoB SDY_2045 c65ae3b77f5a90c598beb8fb073593d0 213 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 211 35.098 T 21-04-2016 IPR014094 Penicillin-binding protein activator LpoB SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 21-04-2016 IPR018201 Beta-ketoacyl synthase, active site SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 7.8E-30 T 21-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 Gene3D G3DSA:3.40.47.10 263 404 3.9E-49 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 SUPERFAMILY SSF53901 1 253 4.99E-64 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.1E-39 T 21-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 PANTHER PTHR11712 1 403 1.8E-169 T 21-04-2016 SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 Gene3D G3DSA:3.40.47.10 6 259 1.2E-54 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 SMART SM00825 Beta-ketoacyl synthase 4 406 7.3E-13 T 21-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SDY_2522 6b14029cfa838799f4c8c3b7de4f5d30 406 SUPERFAMILY SSF53901 215 403 1.36E-60 T 21-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SDY_1234 a55b93dd6c48bdb5a80b2aa35f912a2e 84 Pfam PF04226 Transglycosylase associated protein 34 83 1.2E-13 T 21-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SDY_1234 a55b93dd6c48bdb5a80b2aa35f912a2e 84 PANTHER PTHR33884:SF2 1 84 6.4E-59 T 21-04-2016 SDY_1234 a55b93dd6c48bdb5a80b2aa35f912a2e 84 PANTHER PTHR33884 1 84 6.4E-59 T 21-04-2016 SDY_3234 7d5a76236227326e154c28bc18b441e6 472 Pfam PF15975 Flotillin 325 449 1.6E-36 T 21-04-2016 IPR031905 Flotillin, C-terminal domain SDY_3234 7d5a76236227326e154c28bc18b441e6 472 PANTHER PTHR13806:SF2 8 450 1.5E-177 T 21-04-2016 SDY_3234 7d5a76236227326e154c28bc18b441e6 472 SUPERFAMILY SSF117892 7 125 5.49E-20 T 21-04-2016 IPR001107 Band 7 domain SDY_3234 7d5a76236227326e154c28bc18b441e6 472 Pfam PF01145 SPFH domain / Band 7 family 9 137 1.1E-12 T 21-04-2016 IPR001107 Band 7 domain SDY_3234 7d5a76236227326e154c28bc18b441e6 472 PANTHER PTHR13806 8 450 1.5E-177 T 21-04-2016 IPR027705 Flotillin family SDY_4730 2977ca4e2c53fd8699f3d3d0104f7c08 90 PANTHER PTHR33293 1 89 1.6E-20 T 21-04-2016 SDY_4730 2977ca4e2c53fd8699f3d3d0104f7c08 90 Pfam PF12759 InsA C-terminal domain 42 87 1.3E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4730 2977ca4e2c53fd8699f3d3d0104f7c08 90 PANTHER PTHR33293:SF2 1 89 1.6E-20 T 21-04-2016 SDY_4730 2977ca4e2c53fd8699f3d3d0104f7c08 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 SUPERFAMILY SSF101386 115 202 5.01E-23 T 21-04-2016 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.973 T 21-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.913 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 PANTHER PTHR21256:SF16 1 203 2.6E-121 T 21-04-2016 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 SUPERFAMILY SSF141734 6 122 5.49E-47 T 21-04-2016 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 4.0E-25 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 3.7E-17 T 21-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 5.7E-31 T 21-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 7.8E-30 T 21-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SDY_2215 bad084f04dcc09fa7488f23ae248c70c 203 PANTHER PTHR21256 1 203 2.6E-121 T 21-04-2016 SDY_4459 ef23aa39d7fa5e452a998421f0e9cd7d 113 SUPERFAMILY SSF110857 1 110 7.85E-35 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SDY_4459 ef23aa39d7fa5e452a998421f0e9cd7d 113 Gene3D G3DSA:3.10.490.10 1 111 2.2E-40 T 21-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SDY_4459 ef23aa39d7fa5e452a998421f0e9cd7d 113 PANTHER PTHR12510 1 112 2.3E-71 T 21-04-2016 SDY_4459 ef23aa39d7fa5e452a998421f0e9cd7d 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 8.5E-25 T 21-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like SDY_4459 ef23aa39d7fa5e452a998421f0e9cd7d 113 PANTHER PTHR12510:SF6 1 112 2.3E-71 T 21-04-2016 SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 Gene3D G3DSA:3.90.650.10 151 302 1.0E-24 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 SUPERFAMILY SSF55326 2 142 9.27E-30 T 21-04-2016 SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 SUPERFAMILY SSF56042 149 317 3.89E-40 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 152 299 2.5E-26 T 21-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 PIRSF PIRSF005644 1 322 2.5E-118 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 138 2.0E-15 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 PANTHER PTHR30303:SF0 1 322 2.2E-160 T 21-04-2016 SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 PANTHER PTHR30303 1 322 2.2E-160 T 21-04-2016 SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 Gene3D G3DSA:3.30.1330.10 2 141 3.0E-24 T 21-04-2016 IPR016188 PurM-like, N-terminal domain SDY_2927 fa7ad9efdb8ce17434814bca04bc2a6e 322 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 1 322 2.0E-134 T 21-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 Gene3D G3DSA:1.10.10.10 123 217 1.1E-28 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 SUPERFAMILY SSF52172 1 173 5.73E-36 T 21-04-2016 IPR011006 CheY-like superfamily SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-36 T 21-04-2016 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 PANTHER PTHR26402:SF279 1 218 7.8E-145 T 21-04-2016 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 SMART SM00448 1 112 1.2E-38 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 SMART SM00862 145 216 2.3E-24 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 PANTHER PTHR26402 1 218 7.8E-145 T 21-04-2016 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.5E-23 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_3214 62f40c7573d0e5373dfa3bcf48681638 219 Pfam PF00072 Response regulator receiver domain 3 112 4.9E-22 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Pfam PF12833 Helix-turn-helix domain 309 384 2.6E-19 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 SUPERFAMILY SSF46689 338 385 3.12E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 SMART SM00342 301 384 1.2E-30 T 21-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 21-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Gene3D G3DSA:3.40.50.2300 58 117 2.0E-5 T 21-04-2016 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Gene3D G3DSA:3.40.50.2300 118 251 2.5E-23 T 21-04-2016 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Gene3D G3DSA:1.10.10.60 283 335 2.4E-11 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 SUPERFAMILY SSF53822 10 298 1.04E-44 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 PANTHER PTHR30146:SF24 8 320 4.0E-178 T 21-04-2016 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 PANTHER PTHR30146 8 320 4.0E-178 T 21-04-2016 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 SUPERFAMILY SSF46689 284 333 4.06E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 6.5E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 6.5E-6 T 21-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 6.9E-36 T 21-04-2016 SDY_3710 b1e3d33d77b2aeb262a479a1b8c25376 392 Gene3D G3DSA:1.10.10.60 338 385 1.1E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4160 ea3bb3b2b3d8f47b24456920edfefe29 115 PANTHER PTHR34187 3 115 1.6E-36 T 21-04-2016 SDY_4160 ea3bb3b2b3d8f47b24456920edfefe29 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.2E-15 T 21-04-2016 IPR003807 Domain of unknown function DUF202 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 PIRSF PIRSF017107 1 413 1.4E-242 T 21-04-2016 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 SUPERFAMILY SSF51604 164 411 1.02E-75 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 1.5E-160 T 21-04-2016 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 Gene3D G3DSA:3.20.20.120 167 410 1.4E-71 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 1.8E-69 T 21-04-2016 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 PANTHER PTHR13794 12 184 6.0E-86 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 PANTHER PTHR13794 203 406 6.0E-86 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 SUPERFAMILY SSF54826 1 160 1.96E-62 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 PANTHER PTHR13794:SF57 12 184 6.0E-86 T 21-04-2016 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 PANTHER PTHR13794:SF57 203 406 6.0E-86 T 21-04-2016 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 Gene3D G3DSA:3.30.390.10 1 163 1.3E-79 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_0673 33058107f8c63ebef8b2d2973deb70bd 413 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 164 410 2.0E-113 T 21-04-2016 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 SDY_3691 bdb889c982f947fbb6ec1adf3780f2c1 425 Hamap MF_02021 Cell division protein DamX [damX]. 1 425 25.084 T 21-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 SDY_3691 bdb889c982f947fbb6ec1adf3780f2c1 425 SUPERFAMILY SSF110997 341 405 4.45E-7 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_3691 bdb889c982f947fbb6ec1adf3780f2c1 425 Pfam PF05036 Sporulation related domain 342 414 1.3E-12 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_3691 bdb889c982f947fbb6ec1adf3780f2c1 425 Gene3D G3DSA:3.30.70.1070 340 404 4.5E-5 T 21-04-2016 IPR007730 Sporulation-related domain GO:0042834 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 8.7E-48 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 2.1E-41 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 PANTHER PTHR30445:SF1 1 550 3.3E-281 T 21-04-2016 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 SUPERFAMILY SSF116726 277 360 9.42E-14 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Pfam PF02080 TrkA-C domain 291 360 8.0E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Gene3D G3DSA:3.30.70.1450 288 360 2.2E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Gene3D G3DSA:3.30.70.1450 221 278 2.3E-4 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.8E-38 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.0E-51 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 PANTHER PTHR30445 1 550 3.3E-281 T 21-04-2016 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 SUPERFAMILY SSF116726 213 271 1.44E-7 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_4171 397fe6b0054a44dabbfd806fe0e70bfc 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 58.447 T 21-04-2016 IPR023018 Transport protein YidE, putative SDY_0763 c686e936c6460465b5a8c15889616da5 308 Gene3D G3DSA:3.80.30.10 131 306 3.3E-54 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 ProSitePatterns PS01087 Radical activating enzymes signature. 22 43 - T 21-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SDY_0763 c686e936c6460465b5a8c15889616da5 308 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 11 301 3.7E-110 T 21-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 SDY_0763 c686e936c6460465b5a8c15889616da5 308 PANTHER PTHR30352 109 308 8.6E-119 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 PANTHER PTHR30352 10 63 8.6E-119 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 PANTHER PTHR30352:SF4 109 308 8.6E-119 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 PANTHER PTHR30352:SF4 10 63 8.6E-119 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 SUPERFAMILY SSF102114 114 276 1.57E-13 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 Pfam PF13353 4Fe-4S single cluster domain 21 162 6.9E-10 T 21-04-2016 SDY_0763 c686e936c6460465b5a8c15889616da5 308 Pfam PF04055 Radical SAM superfamily 28 238 4.2E-32 T 21-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SDY_0763 c686e936c6460465b5a8c15889616da5 308 PIRSF PIRSF000371 2 306 8.7E-93 T 21-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 SDY_3556 55e19751bc2801953d55a2b541ab9294 176 SMART SM00421 113 170 5.2E-12 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3556 55e19751bc2801953d55a2b541ab9294 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 168 8.0E-9 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_3556 55e19751bc2801953d55a2b541ab9294 176 SUPERFAMILY SSF46894 97 169 4.76E-10 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_3556 55e19751bc2801953d55a2b541ab9294 176 Gene3D G3DSA:1.10.10.10 115 168 3.5E-10 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2259 433300240300ac499c10d68362d23150 453 PANTHER PTHR30217:SF6 246 453 1.8E-244 T 21-04-2016 SDY_2259 433300240300ac499c10d68362d23150 453 PANTHER PTHR30217:SF6 1 206 1.8E-244 T 21-04-2016 SDY_2259 433300240300ac499c10d68362d23150 453 Pfam PF01136 Peptidase family U32 75 343 6.2E-97 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_2259 433300240300ac499c10d68362d23150 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_2259 433300240300ac499c10d68362d23150 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 7.8E-20 T 21-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_2259 433300240300ac499c10d68362d23150 453 PANTHER PTHR30217 246 453 1.8E-244 T 21-04-2016 SDY_2259 433300240300ac499c10d68362d23150 453 PANTHER PTHR30217 1 206 1.8E-244 T 21-04-2016 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 SMART SM00877 35 110 8.5E-4 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 SMART SM00877 146 219 4.4E-7 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 PIRSF PIRSF012290 1 219 5.4E-84 T 21-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 SUPERFAMILY SSF143414 158 211 4.71E-6 T 21-04-2016 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 PANTHER PTHR40609:SF1 1 218 1.2E-154 T 21-04-2016 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 2.8E-100 T 21-04-2016 IPR030983 Ethanolamine utilization protein EutL GO:0005198 UniPathway: UPA00560 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 PANTHER PTHR40609 1 218 1.2E-154 T 21-04-2016 SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 Pfam PF00936 BMC domain 36 107 2.9E-11 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_2637 ac0ee3321c420584b36150e6bdf3dca3 219 Pfam PF00936 BMC domain 160 208 2.2E-6 T 21-04-2016 IPR000249 Microcompartment protein, bacteria SDY_4578 dddf24c8c20716d5e5c9464275025612 401 PANTHER PTHR11328:SF24 1 398 2.2E-152 T 21-04-2016 SDY_4578 dddf24c8c20716d5e5c9464275025612 401 PANTHER PTHR11328 1 398 2.2E-152 T 21-04-2016 SDY_4578 dddf24c8c20716d5e5c9464275025612 401 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 3 28 - T 21-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 SDY_4578 dddf24c8c20716d5e5c9464275025612 401 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 1 385 2.1E-131 T 21-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 SDY_4578 dddf24c8c20716d5e5c9464275025612 401 SUPERFAMILY SSF103473 2 369 4.05E-26 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4578 dddf24c8c20716d5e5c9464275025612 401 Pfam PF13347 MFS/sugar transport protein 1 372 5.2E-85 T 21-04-2016 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 21-04-2016 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.037 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.5E-30 T 21-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 PANTHER PTHR13718 10 164 2.1E-82 T 21-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 21-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 Gene3D G3DSA:3.30.160.20 10 72 7.0E-31 T 21-04-2016 IPR014720 Double-stranded RNA-binding domain SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 Gene3D G3DSA:3.30.230.10 76 159 6.7E-34 T 21-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 21-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 21-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SDY_3479 0be2190f901f05ece549cbc10d2e7b20 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 21-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 172 1.9E-9 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 SUPERFAMILY SSF56214 29 79 3.82E-10 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 Gene3D G3DSA:3.90.470.20 100 145 4.2E-15 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 Gene3D G3DSA:3.90.470.20 31 99 1.4E-13 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 PANTHER PTHR12215 1 181 2.1E-44 T 21-04-2016 SDY_3630 5212dc3d3f68d3a6f0972e7b557aac9b 195 SUPERFAMILY SSF56214 87 180 8.24E-17 T 21-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PANTHER PTHR30035:SF3 1 250 2.2E-127 T 21-04-2016 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 4.9E-35 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 4.9E-35 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 4.9E-35 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 4.9E-35 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 Pfam PF04333 MlaA lipoprotein 29 222 1.4E-66 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_2550 9ab96bc127def8e4c7d2adb170a065b9 251 PANTHER PTHR30035 1 250 2.2E-127 T 21-04-2016 IPR007428 MlaA lipoprotein GO:0016020 SDY_0642 405686fd219bbbd85667aada4820fb25 169 Pfam PF08349 Protein of unknown function (DUF1722) 41 158 7.5E-36 T 21-04-2016 IPR013560 Domain of unknown function DUF1722 SDY_0642 405686fd219bbbd85667aada4820fb25 169 PANTHER PTHR30087 11 167 5.5E-42 T 21-04-2016 SDY_0642 405686fd219bbbd85667aada4820fb25 169 PANTHER PTHR30087:SF0 11 167 5.5E-42 T 21-04-2016 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 PANTHER PTHR19372 7 329 6.8E-184 T 21-04-2016 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 9.5E-30 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 PANTHER PTHR19372:SF1 7 329 6.8E-184 T 21-04-2016 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 Gene3D G3DSA:3.90.420.10 67 331 3.8E-76 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 SUPERFAMILY SSF56524 75 330 2.88E-94 T 21-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SDY_1035 c3eebe094f1a043cb3e0c5abe83a99e2 334 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 2 334 61.084 T 21-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 Pfam PF01548 Transposase 14 168 1.2E-43 T 21-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 2.8E-21 T 21-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 PANTHER PTHR33055 10 209 3.7E-77 T 21-04-2016 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 PANTHER PTHR33055 257 393 3.7E-77 T 21-04-2016 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 PANTHER PTHR33055:SF3 10 209 3.7E-77 T 21-04-2016 SDY_1155 66493678f04c43e6ae380b652bf5924b 398 PANTHER PTHR33055:SF3 257 393 3.7E-77 T 21-04-2016 SDY_3973 f9de714674d1b64ac6831b260f357baa 93 PANTHER PTHR10657 4 92 2.2E-37 T 21-04-2016 SDY_3973 f9de714674d1b64ac6831b260f357baa 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 21-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SDY_3973 f9de714674d1b64ac6831b260f357baa 93 Gene3D G3DSA:3.10.50.40 5 91 3.3E-34 T 21-04-2016 SDY_3973 f9de714674d1b64ac6831b260f357baa 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.4E-20 T 21-04-2016 SDY_3973 f9de714674d1b64ac6831b260f357baa 93 SUPERFAMILY SSF54534 5 90 2.03E-28 T 21-04-2016 SDY_0940 57578bfc80bf3f249cd22bb6739c4cbb 164 SUPERFAMILY SSF51735 31 162 4.29E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0940 57578bfc80bf3f249cd22bb6739c4cbb 164 Gene3D G3DSA:3.40.50.720 30 162 1.1E-48 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0940 57578bfc80bf3f249cd22bb6739c4cbb 164 Pfam PF13380 CoA binding domain 42 157 9.9E-39 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_0940 57578bfc80bf3f249cd22bb6739c4cbb 164 SMART SM00881 36 131 4.1E-26 T 21-04-2016 IPR003781 CoA-binding GO:0048037 SDY_0940 57578bfc80bf3f249cd22bb6739c4cbb 164 PANTHER PTHR33303 10 160 2.3E-57 T 21-04-2016 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 Gene3D G3DSA:3.40.50.1000 4 18 4.3E-37 T 21-04-2016 IPR023214 HAD-like domain SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 Gene3D G3DSA:3.40.50.1000 90 185 4.3E-37 T 21-04-2016 IPR023214 HAD-like domain SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 4.2E-16 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PANTHER PTHR18901:SF29 1 186 4.0E-73 T 21-04-2016 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 SUPERFAMILY SSF56784 5 185 7.07E-46 T 21-04-2016 IPR023214 HAD-like domain SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.9E-28 T 21-04-2016 IPR023214 HAD-like domain SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PANTHER PTHR18901 1 186 4.0E-73 T 21-04-2016 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.9E-7 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.9E-7 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.9E-7 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 3.9E-7 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 4.6E-66 T 21-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase SDY_2887 f08b14f5f4674e7fea810d9d09d662c2 188 Gene3D G3DSA:1.10.150.240 19 75 3.3E-4 T 21-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SDY_0853 cdbdf2e31219e09450215bed47f7e982 549 Pfam PF08486 Stage II sporulation protein 312 375 3.0E-5 T 21-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal SDY_0853 cdbdf2e31219e09450215bed47f7e982 549 Pfam PF10062 Predicted secreted protein (DUF2300) 412 531 3.1E-41 T 21-04-2016 IPR018748 Domain of unknown function DUF2300, secreted SDY_0853 cdbdf2e31219e09450215bed47f7e982 549 Pfam PF10062 Predicted secreted protein (DUF2300) 84 205 6.2E-37 T 21-04-2016 IPR018748 Domain of unknown function DUF2300, secreted SDY_0853 cdbdf2e31219e09450215bed47f7e982 549 SUPERFAMILY SSF56601 51 225 1.79E-7 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_0906 10509993fd111a4141d135632593c4d9 328 SMART SM00833 240 323 5.1E-4 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_0906 10509993fd111a4141d135632593c4d9 328 PANTHER PTHR13748 4 326 9.5E-81 T 21-04-2016 SDY_0906 10509993fd111a4141d135632593c4d9 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 3.9E-5 T 21-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SDY_0906 10509993fd111a4141d135632593c4d9 328 SUPERFAMILY SSF52540 6 170 9.4E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0906 10509993fd111a4141d135632593c4d9 328 Gene3D G3DSA:3.40.50.300 5 189 6.7E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0906 10509993fd111a4141d135632593c4d9 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 171 2.3E-39 T 21-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SDY_0556 d50ff0593ea41ac475a784f8b3d7c7a1 370 Pfam PF01098 Cell cycle protein 20 364 2.2E-125 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SDY_0556 d50ff0593ea41ac475a784f8b3d7c7a1 370 PANTHER PTHR30474 1 370 7.3E-183 T 21-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SDY_0556 d50ff0593ea41ac475a784f8b3d7c7a1 370 PANTHER PTHR30474:SF1 1 370 7.3E-183 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SDY_0556 d50ff0593ea41ac475a784f8b3d7c7a1 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 21-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SDY_0556 d50ff0593ea41ac475a784f8b3d7c7a1 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.5E-136 T 21-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SDY_2798 ca29f2f9e383337b736373048b43a954 311 SUPERFAMILY SSF52540 95 306 1.89E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2798 ca29f2f9e383337b736373048b43a954 311 Gene3D G3DSA:3.40.50.300 160 259 4.9E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 PANTHER PTHR30443 16 559 0.0 T 21-04-2016 SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 Pfam PF00884 Sulfatase 253 542 1.9E-54 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 PANTHER PTHR30443:SF0 16 559 0.0 T 21-04-2016 SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 Gene3D G3DSA:3.40.720.10 254 547 1.0E-15 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 SUPERFAMILY SSF53649 254 546 4.49E-21 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4099 4d12ee04be76ed44d165d98bb47d1851 562 Pfam PF08019 Domain of unknown function (DUF1705) 74 224 3.6E-43 T 21-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 PANTHER PTHR30456 2 243 9.2E-152 T 21-04-2016 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.663 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.8E-107 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 SUPERFAMILY SSF63892 4 241 2.48E-103 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 Gene3D G3DSA:3.20.20.70 3 242 4.8E-114 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 PANTHER PTHR30456:SF0 2 243 9.2E-152 T 21-04-2016 SDY_2805 e54c642ad0ba5490efe7ffd742930ffd 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 5.3E-117 T 21-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 PANTHER PTHR10953:SF159 1 165 2.5E-152 T 21-04-2016 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 PANTHER PTHR10953:SF159 198 265 2.5E-152 T 21-04-2016 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 SUPERFAMILY SSF69572 10 259 1.44E-62 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 Pfam PF00899 ThiF family 20 260 2.1E-37 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 Gene3D G3DSA:3.40.50.720 5 261 2.6E-53 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 PANTHER PTHR10953 1 165 2.5E-152 T 21-04-2016 SDY_3030 36090eb6b644bfb3b1aa551924d8db69 268 PANTHER PTHR10953 198 265 2.5E-152 T 21-04-2016 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 4.9E-40 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 4.9E-40 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 4.9E-40 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 4.9E-40 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.235 T 21-04-2016 IPR022943 Preprotein translocase subunit SecE SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PANTHER PTHR33910 1 126 3.6E-34 T 21-04-2016 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 PANTHER PTHR33910:SF1 1 126 3.6E-34 T 21-04-2016 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 5.3E-20 T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 Gene3D G3DSA:1.20.5.1030 64 122 2.2E-24 T 21-04-2016 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 21-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SDY_3747 e13d7a68413f9de8b9ba8dc87d318591 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 122 3.2E-16 T 21-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SDY_1924 c39dfe7019f9eba46b1d98bd5600930b 67 Pfam PF09048 Cro 3 61 2.9E-32 T 21-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 SDY_1924 c39dfe7019f9eba46b1d98bd5600930b 67 ProDom PD054632 CRO REPRESSOR TRANSCRIPTION REGULATORY 3D-STRUCTURE DNA-BINDING DIRECT EARLY REGULATION SEQUENCING 3 61 2.0E-27 T 21-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 SDY_1924 c39dfe7019f9eba46b1d98bd5600930b 67 SUPERFAMILY SSF47413 3 66 1.07E-25 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1924 c39dfe7019f9eba46b1d98bd5600930b 67 PIRSF PIRSF003217 2 65 3.6E-25 T 21-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 SDY_1924 c39dfe7019f9eba46b1d98bd5600930b 67 Gene3D G3DSA:3.30.240.10 3 61 1.7E-28 T 21-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 SMART SM00116 387 435 4.9 T 21-04-2016 IPR000644 CBS domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 SMART SM00116 324 374 4.0 T 21-04-2016 IPR000644 CBS domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Pfam PF03741 Integral membrane protein TerC family 27 216 2.3E-50 T 21-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Gene3D G3DSA:3.10.580.10 301 429 1.5E-14 T 21-04-2016 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 PANTHER PTHR22777:SF14 1 540 0.0 T 21-04-2016 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 SUPERFAMILY SSF56176 450 534 1.64E-21 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 SMART SM01091 452 531 3.0E-25 T 21-04-2016 IPR005170 Transporter-associated domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Gene3D G3DSA:3.30.465.10 430 529 2.7E-26 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 SUPERFAMILY SSF54631 303 437 2.95E-26 T 21-04-2016 SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Pfam PF00571 CBS domain 315 371 8.6E-5 T 21-04-2016 IPR000644 CBS domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Pfam PF00571 CBS domain 385 435 6.7E-6 T 21-04-2016 IPR000644 CBS domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 Pfam PF03471 Transporter associated domain 453 529 2.5E-19 T 21-04-2016 IPR005170 Transporter-associated domain SDY_2201 d3a82c6780def0ea7f2611d9858a740d 540 PANTHER PTHR22777 1 540 0.0 T 21-04-2016 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 6.8E-168 T 21-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 PANTHER PTHR30420 1 344 1.1E-219 T 21-04-2016 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 6.9E-155 T 21-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 Gene3D G3DSA:3.40.630.30 218 246 4.8E-8 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 Gene3D G3DSA:3.40.630.30 1 150 4.8E-8 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 PANTHER PTHR30420:SF1 1 344 1.1E-219 T 21-04-2016 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 70.425 T 21-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 SUPERFAMILY SSF55729 1 337 2.74E-134 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 Gene3D G3DSA:2.40.40.20 273 337 2.5E-12 T 21-04-2016 SDY_1530 d167fdb5c4d82810fe64c8d5378f831a 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 7.3E-146 T 21-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 SDY_3457 3cf33cf9f39d8247f8c0c3e5c3b63753 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 6.5E-31 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 SDY_3457 3cf33cf9f39d8247f8c0c3e5c3b63753 85 SUPERFAMILY SSF160272 2 84 3.01E-31 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 SDY_3457 3cf33cf9f39d8247f8c0c3e5c3b63753 85 Gene3D G3DSA:3.30.160.140 2 84 5.5E-39 T 21-04-2016 IPR009962 Protein of unknown function DUF1488 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 5.7E-16 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PANTHER PTHR32248 1 477 9.8E-193 T 21-04-2016 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 6.9E-166 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PANTHER PTHR32248:SF4 1 477 9.8E-193 T 21-04-2016 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.0E-70 T 21-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 PIRSF PIRSF000774 1 477 3.4E-153 T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 21-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SDY_3383 0c1ce90170a8b01a1bde297f3a8564fe 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 1.0E-62 T 21-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 SUPERFAMILY SSF46785 13 86 1.43E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 PANTHER PTHR30136:SF7 4 263 1.1E-133 T 21-04-2016 SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 PANTHER PTHR30136 4 263 1.1E-133 T 21-04-2016 SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 SMART SM00346 13 102 8.0E-36 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 21-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 SUPERFAMILY SSF55781 77 259 6.08E-56 T 21-04-2016 IPR029016 GAF domain-like SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 Gene3D G3DSA:3.30.450.40 86 261 1.4E-70 T 21-04-2016 IPR029016 GAF domain-like SDY_1975 32aed4b863c472bd8af9586839d6f07e 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.1E-48 T 21-04-2016 IPR014757 Transcription regulator IclR, C-terminal SDY_2846 500ff513199491ba1605f067a52b22f2 255 SUPERFAMILY SSF53098 141 255 1.82E-20 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2846 500ff513199491ba1605f067a52b22f2 255 Pfam PF13276 HTH-like domain 77 122 2.7E-14 T 21-04-2016 IPR025948 HTH-like domain SDY_2846 500ff513199491ba1605f067a52b22f2 255 Gene3D G3DSA:3.30.420.10 141 254 1.5E-13 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2846 500ff513199491ba1605f067a52b22f2 255 PANTHER PTHR32552 31 248 6.2E-44 T 21-04-2016 SDY_2846 500ff513199491ba1605f067a52b22f2 255 Pfam PF00665 Integrase core domain 146 255 3.2E-17 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0752 0bd92593e158053ff5cc82580470eb90 86 Gene3D G3DSA:3.40.50.1000 3 80 4.6E-14 T 21-04-2016 IPR023214 HAD-like domain SDY_0752 0bd92593e158053ff5cc82580470eb90 86 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 81 1.8E-13 T 21-04-2016 IPR023214 HAD-like domain SDY_0752 0bd92593e158053ff5cc82580470eb90 86 PANTHER PTHR10000 1 85 1.4E-37 T 21-04-2016 SDY_0752 0bd92593e158053ff5cc82580470eb90 86 PANTHER PTHR10000:SF27 1 85 1.4E-37 T 21-04-2016 SDY_0752 0bd92593e158053ff5cc82580470eb90 86 SUPERFAMILY SSF56784 1 81 1.62E-17 T 21-04-2016 IPR023214 HAD-like domain SDY_3913 524a2aff0509f96465a1bc8793d7c191 289 SUPERFAMILY SSF53474 51 283 1.04E-49 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3913 524a2aff0509f96465a1bc8793d7c191 289 Pfam PF01738 Dienelactone hydrolase family 60 283 3.2E-78 T 21-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 SDY_3913 524a2aff0509f96465a1bc8793d7c191 289 Gene3D G3DSA:3.40.50.1820 52 283 2.1E-71 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3913 524a2aff0509f96465a1bc8793d7c191 289 PANTHER PTHR17630:SF42 51 283 3.1E-120 T 21-04-2016 SDY_3913 524a2aff0509f96465a1bc8793d7c191 289 PANTHER PTHR17630 51 283 3.1E-120 T 21-04-2016 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 Pfam PF00155 Aminotransferase class I and II 145 445 8.6E-31 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 SUPERFAMILY SSF53383 91 466 2.93E-92 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 PANTHER PTHR11751 84 466 2.0E-209 T 21-04-2016 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 PANTHER PTHR11751:SF314 84 466 2.0E-209 T 21-04-2016 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 SUPERFAMILY SSF46785 2 70 4.42E-20 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 SMART SM00345 7 66 1.9E-15 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.4E-14 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 Gene3D G3DSA:1.10.10.10 1 67 1.5E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1735 74df14c2f00cd0046cdae32f77be310c 468 Gene3D G3DSA:3.40.640.10 144 356 5.3E-70 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_1588 1727c6a70753809498d5958b783fd339 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 24 169 4.1E-61 T 21-04-2016 IPR008136 CinA, C-terminal SDY_1588 1727c6a70753809498d5958b783fd339 172 PANTHER PTHR13939 1 171 3.9E-129 T 21-04-2016 SDY_1588 1727c6a70753809498d5958b783fd339 172 Gene3D G3DSA:3.90.950.20 15 171 2.2E-46 T 21-04-2016 IPR008136 CinA, C-terminal SDY_1588 1727c6a70753809498d5958b783fd339 172 SUPERFAMILY SSF142433 16 171 1.02E-45 T 21-04-2016 IPR008136 CinA, C-terminal SDY_1588 1727c6a70753809498d5958b783fd339 172 Pfam PF02464 Competence-damaged protein 18 171 3.6E-48 T 21-04-2016 IPR008136 CinA, C-terminal SDY_1588 1727c6a70753809498d5958b783fd339 172 PANTHER PTHR13939:SF4 1 171 3.9E-129 T 21-04-2016 SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 PANTHER PTHR13903 1 236 2.5E-131 T 21-04-2016 IPR012093 Pirin SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 Gene3D G3DSA:2.60.120.10 4 232 4.4E-73 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 PANTHER PTHR13903:SF7 1 236 2.5E-131 T 21-04-2016 SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 Pfam PF02678 Pirin 7 119 1.3E-37 T 21-04-2016 IPR003829 Pirin, N-terminal domain SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 PIRSF PIRSF006232 1 235 3.1E-58 T 21-04-2016 IPR012093 Pirin SDY_3590 66c5eeffbc4551cf791545ea166602b4 261 SUPERFAMILY SSF51182 1 231 1.49E-80 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_3524 0118bda499a4dd9ff64043bbdfbda1f3 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 5.2E-31 T 21-04-2016 IPR022541 Protein of unknown function DUF2559 SDY_3524 0118bda499a4dd9ff64043bbdfbda1f3 55 ProDom PD026929 YHFG 1 55 5.0E-15 T 21-04-2016 IPR022541 Protein of unknown function DUF2559 SDY_2006 d8c0426c1539c632118952fd6cc0c915 90 Pfam PF14301 Domain of unknown function (DUF4376) 6 89 2.3E-20 T 21-04-2016 IPR025484 Domain of unknown function DUF4376 SDY_1128 3182c2e590e2a982200fbc51cfe0daa7 76 Gene3D G3DSA:1.10.1110.10 1 76 3.9E-43 T 21-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SDY_1128 3182c2e590e2a982200fbc51cfe0daa7 76 SUPERFAMILY SSF46575 1 76 3.27E-35 T 21-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 SDY_1128 3182c2e590e2a982200fbc51cfe0daa7 76 Pfam PF06440 DNA polymerase III, theta subunit 4 71 4.5E-38 T 21-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 SDY_1128 3182c2e590e2a982200fbc51cfe0daa7 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 3.0E-38 T 21-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 SUPERFAMILY SSF56752 7 308 1.31E-105 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.20.10.10 135 295 3.0E-58 T 21-04-2016 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 21-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.30.470.10 7 130 1.6E-43 T 21-04-2016 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.9E-148 T 21-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 PANTHER PTHR11825 1 306 3.8E-136 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 Pfam PF01063 Amino-transferase class IV 36 268 6.0E-51 T 21-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SDY_3978 1d3a670d1bfad1175025fba33bbc4a4c 309 PANTHER PTHR11825:SF7 1 306 3.8E-136 T 21-04-2016 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 SUPERFAMILY SSF55021 168 246 3.27E-23 T 21-04-2016 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 SUPERFAMILY SSF53633 2 161 4.19E-50 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 PANTHER PTHR21499:SF1 2 318 1.4E-134 T 21-04-2016 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 2 317 3.7E-114 T 21-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 PANTHER PTHR21499 2 318 1.4E-134 T 21-04-2016 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 Pfam PF13840 ACT domain 258 315 2.4E-9 T 21-04-2016 IPR027795 GATS-like ACT domain SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 Gene3D G3DSA:3.40.1160.10 3 165 6.1E-47 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 SUPERFAMILY SSF55021 248 317 2.21E-19 T 21-04-2016 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 Pfam PF00696 Amino acid kinase family 3 149 7.1E-33 T 21-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SDY_PA01 512173eeabaa2894ee304cdf2fd13c50 318 Pfam PF01842 ACT domain 189 241 1.9E-8 T 21-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 SUPERFAMILY SSF161098 290 527 1.96E-34 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 PANTHER PTHR30183 1 535 0.0 T 21-04-2016 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 Gene3D G3DSA:1.10.3720.10 292 532 3.5E-32 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 Gene3D G3DSA:1.10.3720.10 20 267 1.8E-35 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 1.2E-295 T 21-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 3.7E-11 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 524 1.6E-7 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 SUPERFAMILY SSF161098 11 265 4.3E-43 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0094 0983a1205a5f7441b2e41ff4340703a9 536 PANTHER PTHR30183:SF8 1 535 0.0 T 21-04-2016 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 SMART SM00732 3 103 5.1E-43 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 PANTHER PTHR33317 1 135 1.4E-47 T 21-04-2016 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 Gene3D G3DSA:3.30.420.140 3 136 2.0E-48 T 21-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 26.489 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 5.9E-63 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 Pfam PF03652 Holliday junction resolvase 4 135 1.1E-43 T 21-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SDY_3123 0d6471b3fe04b19d236ebcb9926c74be 138 SUPERFAMILY SSF53098 3 136 9.26E-44 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4263 36523765a22b364635e8de4ca4b219ad 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 7.9E-73 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 SDY_4263 36523765a22b364635e8de4ca4b219ad 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.1E-30 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 9.0E-19 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.934 T 21-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 SDY_4263 36523765a22b364635e8de4ca4b219ad 153 PANTHER PTHR35805 2 153 9.0E-77 T 21-04-2016 SDY_4263 36523765a22b364635e8de4ca4b219ad 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 9.0E-48 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 SUPERFAMILY SSF54893 2 100 8.24E-36 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 PANTHER PTHR35805:SF1 2 153 9.0E-77 T 21-04-2016 SDY_4263 36523765a22b364635e8de4ca4b219ad 153 SUPERFAMILY SSF57825 101 151 8.5E-16 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 Gene3D G3DSA:3.30.70.140 2 98 6.4E-38 T 21-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal SDY_4263 36523765a22b364635e8de4ca4b219ad 153 Gene3D G3DSA:2.30.30.20 101 152 3.9E-24 T 21-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal SDY_0822 b9874dd7872d5590eefd6068f77d2f5e 81 PANTHER PTHR33359 1 81 3.4E-27 T 21-04-2016 SDY_0822 b9874dd7872d5590eefd6068f77d2f5e 81 Pfam PF02597 ThiS family 4 81 6.2E-23 T 21-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SDY_0822 b9874dd7872d5590eefd6068f77d2f5e 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.1E-24 T 21-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 SDY_0822 b9874dd7872d5590eefd6068f77d2f5e 81 Gene3D G3DSA:3.10.20.30 1 81 9.7E-27 T 21-04-2016 IPR012675 Beta-grasp domain SDY_0822 b9874dd7872d5590eefd6068f77d2f5e 81 SUPERFAMILY SSF54285 1 81 2.06E-24 T 21-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SDY_1535 d1becbe010b94adef2269d109309f520 91 PANTHER PTHR37943:SF1 1 88 5.5E-32 T 21-04-2016 SDY_1535 d1becbe010b94adef2269d109309f520 91 PANTHER PTHR37943 1 88 5.5E-32 T 21-04-2016 SDY_1535 d1becbe010b94adef2269d109309f520 91 Pfam PF05962 HutD 5 79 2.7E-23 T 21-04-2016 IPR010282 Uncharacterised protein family HutD/Ves SDY_1535 d1becbe010b94adef2269d109309f520 91 SUPERFAMILY SSF51182 1 79 4.89E-24 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_1535 d1becbe010b94adef2269d109309f520 91 Gene3D G3DSA:2.60.120.10 7 79 5.3E-22 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_0818 d67813e556a6b4b12db89784e4e156ec 131 PANTHER PTHR33293 6 126 1.6E-26 T 21-04-2016 SDY_0818 d67813e556a6b4b12db89784e4e156ec 131 PANTHER PTHR33293:SF1 6 126 1.6E-26 T 21-04-2016 SDY_0818 d67813e556a6b4b12db89784e4e156ec 131 Pfam PF03400 IS1 transposase 2 131 7.6E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 SUPERFAMILY SSF103481 43 144 1.7E-10 T 21-04-2016 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 SUPERFAMILY SSF103481 209 287 4.32E-11 T 21-04-2016 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 Pfam PF00892 EamA-like transporter family 150 284 2.1E-18 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 Pfam PF00892 EamA-like transporter family 14 140 8.9E-23 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 20 281 1.6E-69 T 21-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 PANTHER PTHR32322:SF8 1 306 7.6E-160 T 21-04-2016 SDY_1047 29b6a3419bf84fda142dc2adb0c82751 306 PANTHER PTHR32322 1 306 7.6E-160 T 21-04-2016 SDY_1685 2da1b3dbc2fdda86bf9b48e45087b1d6 167 PANTHER PTHR30411 1 165 1.7E-129 T 21-04-2016 SDY_1685 2da1b3dbc2fdda86bf9b48e45087b1d6 167 SUPERFAMILY SSF55826 10 163 1.96E-35 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_1685 2da1b3dbc2fdda86bf9b48e45087b1d6 167 Pfam PF04073 Aminoacyl-tRNA editing domain 30 154 1.7E-25 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_1685 2da1b3dbc2fdda86bf9b48e45087b1d6 167 Gene3D G3DSA:3.90.960.10 7 161 1.5E-33 T 21-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SDY_1685 2da1b3dbc2fdda86bf9b48e45087b1d6 167 PANTHER PTHR30411:SF5 1 165 1.7E-129 T 21-04-2016 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 PANTHER PTHR10242:SF3 1 281 3.5E-117 T 21-04-2016 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 Gene3D G3DSA:1.10.1670.10 231 281 1.3E-20 T 21-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SDY_2194 246030f475e91643887a7e4ffb1c8761 282 Pfam PF06029 AlkA N-terminal domain 3 112 3.9E-29 T 21-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SDY_2194 246030f475e91643887a7e4ffb1c8761 282 Gene3D G3DSA:1.10.340.30 113 229 2.9E-38 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 SMART SM01009 1 112 1.6E-49 T 21-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SDY_2194 246030f475e91643887a7e4ffb1c8761 282 SMART SM00478 130 276 1.1E-34 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 Gene3D G3DSA:3.30.310.20 2 112 1.2E-36 T 21-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal SDY_2194 246030f475e91643887a7e4ffb1c8761 282 SUPERFAMILY SSF55945 2 97 1.05E-29 T 21-04-2016 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 21-04-2016 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 SUPERFAMILY SSF48150 102 274 1.05E-48 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 240 9.7E-10 T 21-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SDY_2194 246030f475e91643887a7e4ffb1c8761 282 PANTHER PTHR10242 1 281 3.5E-117 T 21-04-2016 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 PIRSF PIRSF001444 1 847 0.0 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 21-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 1.9E-80 T 21-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 PANTHER PTHR38760 2 848 0.0 T 21-04-2016 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 4.2E-257 T 21-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 SDY_3940 ed6043cbe151d0c2c54afdb6e667d003 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 21-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 SDY_0545 041f3e6b1f8755fdf17315143ca896c8 90 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 1 87 1.9E-37 T 21-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 SDY_0545 041f3e6b1f8755fdf17315143ca896c8 90 Gene3D G3DSA:2.40.160.20 1 90 7.2E-49 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_0545 041f3e6b1f8755fdf17315143ca896c8 90 SUPERFAMILY SSF56925 1 90 1.18E-45 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_0545 041f3e6b1f8755fdf17315143ca896c8 90 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 1 78 2.0E-40 T 21-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 SDY_3779 bc1ec53e776a02ea99b30e778efe03a4 205 Pfam PF06940 Domain of unknown function (DUF1287) 41 202 5.7E-67 T 21-04-2016 IPR009706 Protein of unknown function DUF1287 SDY_3779 bc1ec53e776a02ea99b30e778efe03a4 205 PIRSF PIRSF011444 1 205 1.4E-91 T 21-04-2016 IPR009706 Protein of unknown function DUF1287 SDY_3779 bc1ec53e776a02ea99b30e778efe03a4 205 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 31 202 2.0E-100 T 21-04-2016 IPR009706 Protein of unknown function DUF1287 SDY_1154 59de92463e9cd5c46fe5176a04a7950b 84 PANTHER PTHR11080 1 68 3.7E-23 T 21-04-2016 SDY_1154 59de92463e9cd5c46fe5176a04a7950b 84 SUPERFAMILY SSF52499 4 65 4.71E-12 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_1154 59de92463e9cd5c46fe5176a04a7950b 84 PANTHER PTHR11080:SF37 1 68 3.7E-23 T 21-04-2016 SDY_1154 59de92463e9cd5c46fe5176a04a7950b 84 Pfam PF00857 Isochorismatase family 9 59 1.3E-7 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_1154 59de92463e9cd5c46fe5176a04a7950b 84 Gene3D G3DSA:3.40.50.850 3 65 3.7E-13 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_2104 2f15537a94ec5787a06a0f5584cff803 271 Gene3D G3DSA:3.90.245.10 7 265 1.7E-81 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_2104 2f15537a94ec5787a06a0f5584cff803 271 PANTHER PTHR12304:SF19 19 267 7.9E-83 T 21-04-2016 SDY_2104 2f15537a94ec5787a06a0f5584cff803 271 PANTHER PTHR12304 19 267 7.9E-83 T 21-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase SDY_2104 2f15537a94ec5787a06a0f5584cff803 271 SUPERFAMILY SSF53590 7 265 3.92E-80 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_2104 2f15537a94ec5787a06a0f5584cff803 271 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 9 257 3.4E-51 T 21-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain SDY_4218 60703ed43b255e006d148e32d78d30ea 136 PANTHER PTHR37819:SF1 1 136 3.2E-51 T 21-04-2016 SDY_4218 60703ed43b255e006d148e32d78d30ea 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 1.6E-16 T 21-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like SDY_4218 60703ed43b255e006d148e32d78d30ea 136 PIRSF PIRSF029598 1 136 1.7E-53 T 21-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 SDY_4218 60703ed43b255e006d148e32d78d30ea 136 PANTHER PTHR37819 1 136 3.2E-51 T 21-04-2016 SDY_4218 60703ed43b255e006d148e32d78d30ea 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.437 T 21-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 Gene3D G3DSA:3.40.50.2300 155 311 3.0E-46 T 21-04-2016 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 33 2.1E-10 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 SUPERFAMILY SSF53822 44 297 6.48E-62 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_3589 6667dfabd2306d86639c418ad00e7644 312 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 45 290 3.5E-31 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_3589 6667dfabd2306d86639c418ad00e7644 312 PANTHER PTHR30146:SF2 1 312 4.4E-176 T 21-04-2016 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 Gene3D G3DSA:1.10.260.40 1 40 1.3E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 Gene3D G3DSA:3.40.50.2300 43 154 7.7E-42 T 21-04-2016 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 SUPERFAMILY SSF47413 1 43 1.03E-6 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 SMART SM00354 1 56 2.7E-12 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_3589 6667dfabd2306d86639c418ad00e7644 312 PANTHER PTHR30146 1 312 4.4E-176 T 21-04-2016 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.2E-210 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 SMART SM00788 4 425 6.7E-302 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:1.10.300.10 103 195 1.6E-38 T 21-04-2016 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 SUPERFAMILY SSF52540 3 431 1.49E-180 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 21-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.673 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.0E-176 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 21-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.90.170.10 268 426 9.0E-66 T 21-04-2016 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 PANTHER PTHR11846 1 429 6.4E-263 T 21-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 196 266 1.3E-71 T 21-04-2016 SDY_4412 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 4 94 1.3E-71 T 21-04-2016 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 PANTHER PTHR22769:SF14 1 145 6.7E-34 T 21-04-2016 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 Pfam PF00293 NUDIX domain 4 114 8.0E-19 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 21-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 8.1E-6 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 8.1E-6 T 21-04-2016 IPR020476 NUDIX hydrolase SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 PANTHER PTHR22769 1 145 6.7E-34 T 21-04-2016 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 Gene3D G3DSA:3.90.79.10 2 143 9.1E-34 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_2018 307e4dafc622b419abd71db1a90ceebe 153 SUPERFAMILY SSF55811 5 152 1.14E-30 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 PANTHER PTHR22572:SF118 10 296 4.2E-150 T 21-04-2016 SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 Gene3D G3DSA:3.90.550.10 9 281 1.3E-69 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 PANTHER PTHR22572 10 296 4.2E-150 T 21-04-2016 SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 SUPERFAMILY SSF53448 9 291 1.04E-62 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.8E-116 T 21-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SDY_1288 0b0bf4f1305f9216153bfac86a8062a8 302 Pfam PF00483 Nucleotidyl transferase 10 276 1.9E-25 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SDY_1724 f96383a1610ec95d18a76959e5322525 376 Pfam PF16884 N-terminal domain of oxidoreductase 40 146 6.1E-42 T 21-04-2016 SDY_1724 f96383a1610ec95d18a76959e5322525 376 Pfam PF00107 Zinc-binding dehydrogenase 192 330 1.4E-19 T 21-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SDY_1724 f96383a1610ec95d18a76959e5322525 376 PANTHER PTHR11695 57 376 5.0E-213 T 21-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SDY_1724 f96383a1610ec95d18a76959e5322525 376 SUPERFAMILY SSF50129 38 177 1.74E-45 T 21-04-2016 IPR011032 GroES-like SDY_1724 f96383a1610ec95d18a76959e5322525 376 SMART SM00829 52 370 1.5E-5 T 21-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SDY_1724 f96383a1610ec95d18a76959e5322525 376 SUPERFAMILY SSF50129 330 371 1.84E-5 T 21-04-2016 IPR011032 GroES-like SDY_1724 f96383a1610ec95d18a76959e5322525 376 Gene3D G3DSA:3.90.180.10 35 173 1.9E-58 T 21-04-2016 IPR011032 GroES-like SDY_1724 f96383a1610ec95d18a76959e5322525 376 PANTHER PTHR11695:SF557 57 376 5.0E-213 T 21-04-2016 SDY_1724 f96383a1610ec95d18a76959e5322525 376 SUPERFAMILY SSF51735 158 337 1.9E-44 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1724 f96383a1610ec95d18a76959e5322525 376 Gene3D G3DSA:3.40.50.720 174 340 1.8E-63 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 PANTHER PTHR23409:SF23 197 376 3.6E-283 T 21-04-2016 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 PANTHER PTHR23409:SF23 1 173 3.6E-283 T 21-04-2016 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 PANTHER PTHR23409 197 376 3.6E-283 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 PANTHER PTHR23409 1 173 3.6E-283 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 5.9E-50 T 21-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 SUPERFAMILY SSF47240 3 340 4.33E-117 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 21-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SDY_2429 e2a65a197fb38a1c189138d23a86bc98 376 Gene3D G3DSA:1.10.620.20 3 340 4.4E-129 T 21-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PANTHER PTHR22912 209 524 3.5E-216 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 11 527 2.1E-239 T 21-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PIRSF PIRSF000238 11 531 5.1E-262 T 21-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 223 513 8.6E-44 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Gene3D G3DSA:3.50.50.60 334 520 1.7E-39 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 355 375 - T 21-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 SUPERFAMILY SSF52833 11 111 2.68E-29 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 385 3.2E-38 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 225 244 3.2E-38 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 325 343 3.2E-38 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 452 468 3.2E-38 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 478 500 3.2E-38 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 SUPERFAMILY SSF52833 116 207 4.4E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Gene3D G3DSA:3.40.30.10 115 207 4.6E-35 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PANTHER PTHR22912:SF107 209 524 3.5E-216 T 21-04-2016 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Pfam PF13192 Thioredoxin domain 136 205 3.1E-8 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Gene3D G3DSA:3.40.30.10 11 104 1.3E-33 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 415 431 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 271 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 488 506 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 348 360 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 224 246 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 454 475 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 363 387 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 326 334 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 286 3.6E-66 T 21-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 SUPERFAMILY SSF51905 217 524 1.8E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0541 98c8a9bbc142830adcfd560550d603b9 531 Gene3D G3DSA:3.50.50.60 221 333 1.2E-21 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_3172 140621777a725546cb4bb45baf79dbfb 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.299 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_3172 140621777a725546cb4bb45baf79dbfb 192 PANTHER PTHR37528 2 192 1.1E-65 T 21-04-2016 SDY_3172 140621777a725546cb4bb45baf79dbfb 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 176 5.6E-42 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_3172 140621777a725546cb4bb45baf79dbfb 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 166 1.4E-14 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_3172 140621777a725546cb4bb45baf79dbfb 192 SUPERFAMILY SSF101327 7 176 6.8E-55 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 Gene3D G3DSA:3.40.50.1100 180 438 5.0E-45 T 21-04-2016 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 1.5E-244 T 21-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 279.757 T 21-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 402 1.5E-60 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 PANTHER PTHR10314:SF9 44 131 4.1E-219 T 21-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 PANTHER PTHR10314:SF9 155 441 4.1E-219 T 21-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 PANTHER PTHR10314 44 131 4.1E-219 T 21-04-2016 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 PANTHER PTHR10314 155 441 4.1E-219 T 21-04-2016 SDY_2561 7b0901b38c1dcaf8a7d4f6042cc4bf72 442 SUPERFAMILY SSF53686 73 435 3.7E-55 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_3372 1d548dd9d8568695e9de75257f23917a 97 Gene3D G3DSA:3.30.750.24 9 90 2.1E-11 T 21-04-2016 IPR002645 STAS domain SDY_3372 1d548dd9d8568695e9de75257f23917a 97 PANTHER PTHR35849:SF1 1 94 6.0E-38 T 21-04-2016 SDY_3372 1d548dd9d8568695e9de75257f23917a 97 PANTHER PTHR35849 1 94 6.0E-38 T 21-04-2016 SDY_3372 1d548dd9d8568695e9de75257f23917a 97 SUPERFAMILY SSF52091 6 91 2.75E-14 T 21-04-2016 IPR002645 STAS domain SDY_3372 1d548dd9d8568695e9de75257f23917a 97 Pfam PF13466 STAS domain 14 90 4.2E-18 T 21-04-2016 IPR002645 STAS domain SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.165 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-28 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 Gene3D G3DSA:3.30.1320.10 1 78 1.1E-33 T 21-04-2016 IPR023803 Ribosomal protein S16 domain SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 21-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 SUPERFAMILY SSF54565 1 76 5.89E-29 T 21-04-2016 IPR023803 Ribosomal protein S16 domain SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 PANTHER PTHR12919 1 78 2.3E-42 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2783 1b64f96e17b3232b18d4f8cfe5373512 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-24 T 21-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 SUPERFAMILY SSF51445 3 316 5.58E-86 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 PANTHER PTHR30480 4 326 5.4E-147 T 21-04-2016 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 318 5.2E-101 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 PANTHER PTHR30480:SF7 4 326 5.4E-147 T 21-04-2016 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.774 T 21-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 21-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 SDY_2043 2fee95e0088ae0ffd08607c74a2563bb 341 Gene3D G3DSA:3.20.20.300 3 330 1.3E-96 T 21-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SDY_1251 956de9fbddb41b41c36f550c7c291fe4 131 PANTHER PTHR33293 4 126 5.8E-22 T 21-04-2016 SDY_1251 956de9fbddb41b41c36f550c7c291fe4 131 Pfam PF03400 IS1 transposase 2 131 9.7E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3323 aad8e041112ba424f5784b16850fbb8c 125 PANTHER PTHR33293 1 124 1.4E-41 T 21-04-2016 SDY_3323 aad8e041112ba424f5784b16850fbb8c 125 Pfam PF03400 IS1 transposase 1 125 2.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4606 64ebf211c2df241d1e2cc73dd08a01e7 67 Pfam PF04328 Protein of unknown function (DUF466) 5 67 8.0E-28 T 21-04-2016 IPR007423 Protein of unknown function DUF466 SDY_4606 64ebf211c2df241d1e2cc73dd08a01e7 67 PANTHER PTHR38453:SF2 1 67 7.3E-62 T 21-04-2016 SDY_4606 64ebf211c2df241d1e2cc73dd08a01e7 67 PANTHER PTHR38453 1 67 7.3E-62 T 21-04-2016 SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Gene3D G3DSA:3.40.109.10 2 239 4.9E-75 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Pfam PF00881 Nitroreductase family 11 159 4.1E-17 T 21-04-2016 IPR029479 Nitroreductase SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PANTHER PTHR23026 1 185 3.9E-78 T 21-04-2016 SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PIRSF PIRSF005426 1 240 6.9E-83 T 21-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 SUPERFAMILY SSF55469 1 239 3.53E-74 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_0744 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PANTHER PTHR23026:SF98 1 185 3.9E-78 T 21-04-2016 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 4 101 1.6E-25 T 21-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 PANTHER PTHR38779 1 120 6.1E-28 T 21-04-2016 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 Pfam PF02501 Type II secretion system (T2SS), protein I 38 116 1.2E-20 T 21-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 24 4.6E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 Gene3D G3DSA:3.30.1300.30 31 116 5.0E-29 T 21-04-2016 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 Pfam PF13633 Prokaryotic N-terminal methylation site 2 26 2.0E-8 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 SUPERFAMILY SSF54523 36 115 3.14E-20 T 21-04-2016 SDY_3098 b65790d9fcef623cf2334b635b9bf854 123 PANTHER PTHR38779:SF2 1 120 6.1E-28 T 21-04-2016 SDY_4274 bac121809736df80d53b71a0fd6fd1e6 121 SUPERFAMILY SSF46689 9 103 2.51E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_4274 bac121809736df80d53b71a0fd6fd1e6 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_4274 bac121809736df80d53b71a0fd6fd1e6 121 PANTHER PTHR37936 1 121 3.4E-48 T 21-04-2016 SDY_4274 bac121809736df80d53b71a0fd6fd1e6 121 Gene3D G3DSA:1.10.10.60 15 102 6.0E-12 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 PANTHER PTHR30616 1 243 2.9E-155 T 21-04-2016 SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 9.0E-82 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 SUPERFAMILY SSF64438 4 242 1.19E-89 T 21-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 2.4E-77 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 PANTHER PTHR30616:SF3 1 243 2.9E-155 T 21-04-2016 SDY_2836 5cf27f10f12b5cb04cacea9b854903ac 243 Gene3D G3DSA:3.60.140.10 3 242 4.2E-97 T 21-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SDY_3817 47b222af3695218178738b7b624b465c 281 Gene3D G3DSA:1.20.1080.10 4 258 1.2E-86 T 21-04-2016 IPR023271 Aquaporin-like SDY_3817 47b222af3695218178738b7b624b465c 281 PANTHER PTHR19139:SF100 10 277 2.5E-96 T 21-04-2016 SDY_3817 47b222af3695218178738b7b624b465c 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 7.5E-76 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 Pfam PF00230 Major intrinsic protein 2 251 2.3E-77 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.5E-52 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 PANTHER PTHR19139 10 277 2.5E-96 T 21-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 21-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SDY_3817 47b222af3695218178738b7b624b465c 281 SUPERFAMILY SSF81338 9 257 1.2E-79 T 21-04-2016 IPR023271 Aquaporin-like SDY_0035 40b1ebedaba532ade6742ff41717d355 220 Pfam PF00484 Carbonic anhydrase 38 187 2.9E-50 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 PANTHER PTHR11002 1 207 2.8E-180 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 SMART SM00947 30 192 1.3E-69 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 PANTHER PTHR11002:SF23 1 207 2.8E-180 T 21-04-2016 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 SUPERFAMILY SSF53056 2 212 3.27E-74 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 Gene3D G3DSA:3.40.1050.10 1 216 2.6E-77 T 21-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_0035 40b1ebedaba532ade6742ff41717d355 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 21-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 Gene3D G3DSA:3.40.50.300 422 506 2.4E-5 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 PANTHER PTHR11059 2 553 1.1E-187 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 SUPERFAMILY SSF52540 284 507 1.02E-29 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 SUPERFAMILY SSF52540 4 50 1.02E-29 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.0E-18 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 5.2E-172 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 Gene3D G3DSA:3.40.50.300 1 206 5.2E-75 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 PIRSF PIRSF003128 1 553 1.1E-157 T 21-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SDY_2789 ee6046718fa7bf4fdba97de43a97acc0 553 SUPERFAMILY SSF52540 1 217 9.02E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 Pfam PF01032 FecCD transport family 22 323 4.7E-86 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 Gene3D G3DSA:1.10.3470.10 6 324 2.1E-101 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 31.807 T 21-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 PANTHER PTHR30472 4 326 1.7E-213 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 PANTHER PTHR30472:SF29 4 326 1.7E-213 T 21-04-2016 SDY_1806 e33c45a7362bf257f9fa755ed0f768ae 326 SUPERFAMILY SSF81345 7 323 7.98E-85 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_3328 597465296a5de04a017204cb6868199c 196 PANTHER PTHR30390:SF5 1 196 1.4E-134 T 21-04-2016 SDY_3328 597465296a5de04a017204cb6868199c 196 Gene3D G3DSA:3.40.50.10490 2 191 6.4E-56 T 21-04-2016 SDY_3328 597465296a5de04a017204cb6868199c 196 Pfam PF13580 SIS domain 9 144 4.4E-33 T 21-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SDY_3328 597465296a5de04a017204cb6868199c 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 63.307 T 21-04-2016 IPR023070 DnaA initiator-associating protein SDY_3328 597465296a5de04a017204cb6868199c 196 SUPERFAMILY SSF53697 2 191 1.27E-51 T 21-04-2016 SDY_3328 597465296a5de04a017204cb6868199c 196 PANTHER PTHR30390 1 196 1.4E-134 T 21-04-2016 SDY_0839 9d2afa99622b3935bad8faba6626ffb5 131 Pfam PF03400 IS1 transposase 2 131 1.7E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0839 9d2afa99622b3935bad8faba6626ffb5 131 PANTHER PTHR33293:SF1 6 126 2.4E-25 T 21-04-2016 SDY_0839 9d2afa99622b3935bad8faba6626ffb5 131 PANTHER PTHR33293 6 126 2.4E-25 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 Gene3D G3DSA:3.30.420.40 81 220 1.6E-24 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 SUPERFAMILY SSF53067 208 393 5.55E-35 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 SUPERFAMILY SSF53067 83 204 1.87E-16 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 PANTHER PTHR18964:SF123 61 338 6.7E-56 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 Gene3D G3DSA:1.10.10.10 11 70 3.2E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 Pfam PF00480 ROK family 118 343 9.3E-32 T 21-04-2016 IPR000600 ROK family SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 Gene3D G3DSA:3.30.420.40 221 353 2.7E-38 T 21-04-2016 SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 SUPERFAMILY SSF46785 12 70 3.42E-8 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2740 b7d3e3504fb17e077da6e5f8c8de5872 399 PANTHER PTHR18964 61 338 6.7E-56 T 21-04-2016 SDY_2323 be2de2fb964279039702feb91ad2276d 263 PANTHER PTHR30151 6 263 3.2E-192 T 21-04-2016 SDY_2323 be2de2fb964279039702feb91ad2276d 263 Gene3D G3DSA:1.10.3720.10 55 249 3.4E-27 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2323 be2de2fb964279039702feb91ad2276d 263 SUPERFAMILY SSF161098 56 237 4.97E-36 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2323 be2de2fb964279039702feb91ad2276d 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 8.3E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2323 be2de2fb964279039702feb91ad2276d 263 PANTHER PTHR30151:SF22 6 263 3.2E-192 T 21-04-2016 SDY_0305 d992eacb10931579088c8448f4e81bde 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.1E-38 T 21-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0305 d992eacb10931579088c8448f4e81bde 303 PANTHER PTHR21708:SF24 1 303 6.0E-90 T 21-04-2016 SDY_0305 d992eacb10931579088c8448f4e81bde 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.7E-24 T 21-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0305 d992eacb10931579088c8448f4e81bde 303 SUPERFAMILY SSF48179 168 289 1.63E-39 T 21-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SDY_0305 d992eacb10931579088c8448f4e81bde 303 Gene3D G3DSA:1.10.1040.10 175 290 6.4E-46 T 21-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SDY_0305 d992eacb10931579088c8448f4e81bde 303 PANTHER PTHR21708 1 303 6.0E-90 T 21-04-2016 SDY_0305 d992eacb10931579088c8448f4e81bde 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 1.8E-75 T 21-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0305 d992eacb10931579088c8448f4e81bde 303 SUPERFAMILY SSF51735 1 167 1.64E-60 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0305 d992eacb10931579088c8448f4e81bde 303 Gene3D G3DSA:3.40.50.720 1 174 1.0E-47 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Gene3D G3DSA:3.30.1600.10 149 193 1.2E-26 T 21-04-2016 IPR026591 Sirtuin family, catalytic core small domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Gene3D G3DSA:3.30.1600.10 57 96 1.2E-26 T 21-04-2016 IPR026591 Sirtuin family, catalytic core small domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 SUPERFAMILY SSF52467 41 270 2.8E-74 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Pfam PF02146 Sir2 family 48 221 8.1E-51 T 21-04-2016 IPR003000 Sirtuin family GO:0070403 SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Gene3D G3DSA:3.40.50.1220 106 148 1.1E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Gene3D G3DSA:3.40.50.1220 39 56 1.1E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Gene3D G3DSA:3.40.50.1220 200 266 1.1E-41 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 PANTHER PTHR11085 42 269 9.7E-80 T 21-04-2016 IPR003000 Sirtuin family GO:0070403 SDY_2030 81a6eb580e68e7865f5d32f3ee5226f2 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 62.659 T 21-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 SDY_2790 9eddc944709ec6ef4afe37deef2da94e 113 Pfam PF04355 SmpA / OmlA family 35 104 4.3E-27 T 21-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SDY_2790 9eddc944709ec6ef4afe37deef2da94e 113 PANTHER PTHR37482:SF1 1 113 3.4E-55 T 21-04-2016 SDY_2790 9eddc944709ec6ef4afe37deef2da94e 113 PANTHER PTHR37482 1 113 3.4E-55 T 21-04-2016 SDY_2790 9eddc944709ec6ef4afe37deef2da94e 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.055 T 21-04-2016 IPR026592 Outer membrane protein assembly factor BamE SDY_0631 ca60018628a13c98559bac52b628d9ad 190 Pfam PF02669 K+-transporting ATPase, c chain 5 187 1.4E-68 T 21-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SDY_0631 ca60018628a13c98559bac52b628d9ad 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 188 3.6E-99 T 21-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SDY_0631 ca60018628a13c98559bac52b628d9ad 190 PANTHER PTHR30042:SF2 1 188 4.0E-89 T 21-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SDY_0631 ca60018628a13c98559bac52b628d9ad 190 PANTHER PTHR30042 1 188 4.0E-89 T 21-04-2016 SDY_0631 ca60018628a13c98559bac52b628d9ad 190 PIRSF PIRSF001296 1 190 6.7E-74 T 21-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SDY_0631 ca60018628a13c98559bac52b628d9ad 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 32.873 T 21-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 SUPERFAMILY SSF69572 2 245 4.45E-82 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 PANTHER PTHR10953 1 246 2.1E-148 T 21-04-2016 SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 Pfam PF00899 ThiF family 9 240 3.0E-66 T 21-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 PANTHER PTHR10953:SF158 1 246 2.1E-148 T 21-04-2016 SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 Gene3D G3DSA:3.40.50.720 3 244 9.3E-78 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3734 8cc45dcdaea703cdce9ccc168a46d6e7 251 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 8 209 2.3E-87 T 21-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.10410 83 173 1.2E-31 T 21-04-2016 IPR023215 Nitrophenylphosphatase-like domain SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 PANTHER PTHR19288 3 247 3.0E-170 T 21-04-2016 SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13242 HAD-hyrolase-like 174 246 4.5E-20 T 21-04-2016 SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.8E-22 T 21-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 2.1E-65 T 21-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 SUPERFAMILY SSF56784 1 247 5.7E-65 T 21-04-2016 IPR023214 HAD-like domain SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 1 79 3.6E-39 T 21-04-2016 IPR023214 HAD-like domain SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 174 247 3.6E-39 T 21-04-2016 IPR023214 HAD-like domain SDY_0609 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 PANTHER PTHR19288:SF40 3 247 3.0E-170 T 21-04-2016 SDY_3736 8804acf7227c1f23085bd4c46ded4b32 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.842 T 21-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SDY_3736 8804acf7227c1f23085bd4c46ded4b32 256 PANTHER PTHR34266 1 255 5.5E-158 T 21-04-2016 SDY_3736 8804acf7227c1f23085bd4c46ded4b32 256 Gene3D G3DSA:3.20.20.70 1 253 3.5E-63 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3736 8804acf7227c1f23085bd4c46ded4b32 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 6.3E-110 T 21-04-2016 SDY_3736 8804acf7227c1f23085bd4c46ded4b32 256 SUPERFAMILY SSF110399 1 235 9.29E-81 T 21-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SDY_4409 fbd77c706d8f61ca5c95756948035607 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 8.1E-94 T 21-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SDY_4409 fbd77c706d8f61ca5c95756948035607 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.5E-18 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SDY_4409 fbd77c706d8f61ca5c95756948035607 243 Gene3D G3DSA:3.40.1280.10 93 242 8.0E-54 T 21-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SDY_4409 fbd77c706d8f61ca5c95756948035607 243 Gene3D G3DSA:3.30.1330.30 1 76 1.5E-27 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like SDY_4409 fbd77c706d8f61ca5c95756948035607 243 SMART SM00967 4 80 3.9E-21 T 21-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SDY_4409 fbd77c706d8f61ca5c95756948035607 243 SUPERFAMILY SSF55315 2 76 5.18E-21 T 21-04-2016 IPR029064 50S ribosomal protein L30e-like SDY_4409 fbd77c706d8f61ca5c95756948035607 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 2.3E-40 T 21-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SDY_4409 fbd77c706d8f61ca5c95756948035607 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.083 T 21-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB SDY_4409 fbd77c706d8f61ca5c95756948035607 243 SUPERFAMILY SSF75217 68 242 1.05E-48 T 21-04-2016 IPR029028 Alpha/beta knot methyltransferases SDY_4409 fbd77c706d8f61ca5c95756948035607 243 PANTHER PTHR12029 3 242 9.7E-85 T 21-04-2016 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 PANTHER PTHR30505:SF0 23 538 1.3E-274 T 21-04-2016 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 SUPERFAMILY SSF52794 4 88 1.62E-9 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 213 552 1.8E-150 T 21-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 PANTHER PTHR30505 23 538 1.3E-274 T 21-04-2016 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 Gene3D G3DSA:3.40.50.2300 102 206 2.3E-42 T 21-04-2016 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 Pfam PF02378 Phosphotransferase system, EIIC 233 496 2.5E-19 T 21-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 1.4E-18 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 7.1E-40 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SDY_2315 d1e03771b4b4687ea2b01cd0a2f62ac0 563 SUPERFAMILY SSF52794 105 206 3.84E-35 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_3816 d08945678e24c1ed1ad25fc20c27125f 81 Pfam PF06005 Protein of unknown function (DUF904) 3 80 2.8E-25 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 SDY_3816 d08945678e24c1ed1ad25fc20c27125f 81 Hamap MF_01196 Cell division protein ZapB [zapB]. 3 81 18.505 T 21-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 SDY_1014 d1dc95982f7a01a809e64c98088147f0 181 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 84 181 1.0E-54 T 21-04-2016 IPR004914 Antirestriction protein SDY_1014 d1dc95982f7a01a809e64c98088147f0 181 Pfam PF03230 Antirestriction protein 86 181 2.3E-36 T 21-04-2016 IPR004914 Antirestriction protein SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 PANTHER PTHR10996:SF118 1 324 1.7E-156 T 21-04-2016 SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 Gene3D G3DSA:3.40.50.720 2 113 5.0E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.1E-61 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 PANTHER PTHR10996 1 324 1.7E-156 T 21-04-2016 SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 SUPERFAMILY SSF52283 1 133 2.65E-28 T 21-04-2016 SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 SUPERFAMILY SSF51735 100 288 1.87E-57 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 Gene3D G3DSA:3.40.50.720 114 287 4.8E-65 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 75.449 T 21-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 SDY_4350 b259659bad8b965db55afa8d55d50b0e 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.9E-30 T 21-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 SUPERFAMILY SSF46894 63 127 2.52E-19 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 Pfam PF00196 Bacterial regulatory proteins, luxR family 70 124 2.1E-20 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 ProSitePatterns PS00622 LuxR-type HTH domain signature. 85 112 - T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 Gene3D G3DSA:1.10.10.10 57 127 7.6E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 PANTHER PTHR26402 28 125 4.2E-25 T 21-04-2016 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 101 113 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 71 85 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 85 101 1.1E-13 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 PANTHER PTHR26402:SF607 28 125 4.2E-25 T 21-04-2016 SDY_0996 bd4a1bdf3d4a3d8f50d67cc5599e41ce 131 SMART SM00421 68 125 8.6E-23 T 21-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SDY_4149 edce07d47a6a063b22034479cb092ef6 501 PANTHER PTHR24421:SF1 171 499 2.3E-89 T 21-04-2016 SDY_4149 edce07d47a6a063b22034479cb092ef6 501 SMART SM00387 410 500 7.0E-12 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4149 edce07d47a6a063b22034479cb092ef6 501 Pfam PF05231 MASE1 13 277 1.0E-13 T 21-04-2016 IPR007895 MASE1 SDY_4149 edce07d47a6a063b22034479cb092ef6 501 Gene3D G3DSA:3.30.565.10 374 497 1.3E-8 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4149 edce07d47a6a063b22034479cb092ef6 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 498 1.8E-6 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4149 edce07d47a6a063b22034479cb092ef6 501 Pfam PF07730 Histidine kinase 306 371 1.4E-14 T 21-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SDY_4149 edce07d47a6a063b22034479cb092ef6 501 SUPERFAMILY SSF55874 385 497 1.78E-17 T 21-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SDY_4149 edce07d47a6a063b22034479cb092ef6 501 PANTHER PTHR24421 171 499 2.3E-89 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Pfam PF00364 Biotin-requiring enzyme 207 277 1.2E-21 T 21-04-2016 IPR000089 Biotin/lipoyl attachment SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Pfam PF00364 Biotin-requiring enzyme 4 73 1.7E-21 T 21-04-2016 IPR000089 Biotin/lipoyl attachment SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Pfam PF00364 Biotin-requiring enzyme 107 176 6.2E-23 T 21-04-2016 IPR000089 Biotin/lipoyl attachment SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 SUPERFAMILY SSF51230 105 197 3.4E-24 T 21-04-2016 IPR011053 Single hybrid motif SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Gene3D G3DSA:4.10.320.10 315 363 2.0E-22 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Gene3D G3DSA:2.40.50.100 1 94 5.7E-22 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Gene3D G3DSA:2.40.50.100 207 298 9.1E-22 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Gene3D G3DSA:2.40.50.100 107 182 2.7E-23 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 SUPERFAMILY SSF52777 384 625 8.9E-80 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 SUPERFAMILY SSF47005 317 362 2.22E-13 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 SUPERFAMILY SSF51230 206 298 2.49E-23 T 21-04-2016 IPR011053 Single hybrid motif SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 395 625 3.5E-79 T 21-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 180 626 2.5E-239 T 21-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Pfam PF02817 e3 binding domain 323 358 2.1E-15 T 21-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 SUPERFAMILY SSF51230 1 93 5.23E-23 T 21-04-2016 IPR011053 Single hybrid motif SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 PANTHER PTHR23151:SF68 124 626 3.1E-274 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 Gene3D G3DSA:3.30.559.10 385 626 5.0E-83 T 21-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 PANTHER PTHR23151 124 626 3.1E-274 T 21-04-2016 SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SDY_0145 9f051e6e17e01065873f65b0150be8bb 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 21-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 21-04-2016 IPR013105 Tetratricopeptide repeat 2 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 SMART SM00028 62 95 0.0033 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 SMART SM00028 96 129 2.0E-4 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 SMART SM00028 234 267 17.0 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 PANTHER PTHR23083 58 290 1.4E-27 T 21-04-2016 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 PANTHER PTHR23083 31 38 1.4E-27 T 21-04-2016 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 Gene3D G3DSA:1.25.40.10 49 267 3.6E-32 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 PIRSF PIRSF004654 1 292 1.6E-122 T 21-04-2016 IPR023605 Lipoprotein NlpI SDY_3342 d86df7b260f20bebe3ab2625429fbefd 294 SUPERFAMILY SSF48452 27 283 5.96E-78 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 7.1E-26 T 21-04-2016 IPR012156 Cold shock, CspA GO:0003676 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 21-04-2016 IPR011129 Cold shock protein GO:0003676 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.9E-33 T 21-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544:SF53 1 69 1.1E-48 T 21-04-2016 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544 1 69 1.1E-48 T 21-04-2016 SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 67 2.7E-32 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_1969 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 21-04-2016 IPR019844 Cold-shock conserved site SDY_0817 ec6fc32efc51cdc5d1e2a44ec0539172 184 PANTHER PTHR23291 1 183 1.5E-77 T 21-04-2016 IPR006214 Bax inhibitor 1-related SDY_0817 ec6fc32efc51cdc5d1e2a44ec0539172 184 PANTHER PTHR23291:SF42 1 183 1.5E-77 T 21-04-2016 SDY_0817 ec6fc32efc51cdc5d1e2a44ec0539172 184 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 5 179 3.6E-52 T 21-04-2016 SDY_0709 388b7440f751b01deb0d56ef744bb678 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 6.9E-29 T 21-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 SDY_0709 388b7440f751b01deb0d56ef744bb678 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.084 T 21-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 SDY_4582 74a9b3b9f9291199c63bd69e07a22a3b 125 PANTHER PTHR33293 1 123 1.7E-42 T 21-04-2016 SDY_4582 74a9b3b9f9291199c63bd69e07a22a3b 125 Pfam PF03400 IS1 transposase 1 125 8.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0032 74a9b3b9f9291199c63bd69e07a22a3b 125 PANTHER PTHR33293 1 123 1.7E-42 T 21-04-2016 SDY_0032 74a9b3b9f9291199c63bd69e07a22a3b 125 Pfam PF03400 IS1 transposase 1 125 8.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0569 74a9b3b9f9291199c63bd69e07a22a3b 125 PANTHER PTHR33293 1 123 1.7E-42 T 21-04-2016 SDY_0569 74a9b3b9f9291199c63bd69e07a22a3b 125 Pfam PF03400 IS1 transposase 1 125 8.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1419 f0178ed4c0bf447f9aab83f76a672911 187 SMART SM00463 85 169 1.0E-18 T 21-04-2016 IPR002625 Smr domain SDY_1419 f0178ed4c0bf447f9aab83f76a672911 187 PANTHER PTHR35562 1 179 2.5E-87 T 21-04-2016 SDY_1419 f0178ed4c0bf447f9aab83f76a672911 187 SUPERFAMILY SSF160443 86 169 3.4E-12 T 21-04-2016 IPR002625 Smr domain SDY_1419 f0178ed4c0bf447f9aab83f76a672911 187 Pfam PF01713 Smr domain 89 169 1.5E-18 T 21-04-2016 IPR002625 Smr domain SDY_1419 f0178ed4c0bf447f9aab83f76a672911 187 PANTHER PTHR35562:SF2 1 179 2.5E-87 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375:SF182 85 269 3.1E-144 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375:SF182 2 44 3.1E-144 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375:SF182 321 442 3.1E-144 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Pfam PF00012 Hsp70 protein 330 422 3.7E-7 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Pfam PF00012 Hsp70 protein 3 228 1.2E-14 T 21-04-2016 IPR013126 Heat shock protein 70 family SDY_2193 78d903cf3872d192be544a342c01b7dc 450 SUPERFAMILY SSF53067 208 276 1.17E-30 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 SUPERFAMILY SSF53067 328 447 1.17E-30 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Gene3D G3DSA:3.30.420.40 85 217 1.8E-30 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Gene3D G3DSA:3.30.420.40 2 43 1.8E-30 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Gene3D G3DSA:3.30.420.40 218 241 3.9E-14 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Gene3D G3DSA:3.30.420.40 374 433 3.9E-14 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 Gene3D G3DSA:3.90.640.10 306 364 3.1E-4 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 21-04-2016 IPR018181 Heat shock protein 70, conserved site SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375 2 44 3.1E-144 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375 85 269 3.1E-144 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 SUPERFAMILY SSF53067 85 205 3.56E-27 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 SUPERFAMILY SSF53067 2 44 3.56E-27 T 21-04-2016 SDY_2193 78d903cf3872d192be544a342c01b7dc 450 PANTHER PTHR19375 321 442 3.1E-144 T 21-04-2016 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 10 433 7.0E-218 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PANTHER PTHR10283 8 434 1.7E-161 T 21-04-2016 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PANTHER PTHR10283:SF21 8 434 1.7E-161 T 21-04-2016 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 330 352 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 404 428 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 108 132 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 224 249 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 371 396 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 151 175 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 184 207 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 PRINTS PR00758 Arsenical pump membrane protein signature 285 309 4.2E-123 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_3560 b0ec6791294edd8728f33249d30c771a 436 Pfam PF02040 Arsenical pump membrane protein 10 430 9.2E-158 T 21-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SDY_0724 64a6fd5ce08e484d672e29ffcf7b2f88 298 Gene3D G3DSA:3.30.420.10 66 226 6.6E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0724 64a6fd5ce08e484d672e29ffcf7b2f88 298 SUPERFAMILY SSF53098 65 229 1.34E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0724 64a6fd5ce08e484d672e29ffcf7b2f88 298 PANTHER PTHR32552 2 235 5.5E-61 T 21-04-2016 SDY_0724 64a6fd5ce08e484d672e29ffcf7b2f88 298 Pfam PF00665 Integrase core domain 72 186 7.3E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0724 64a6fd5ce08e484d672e29ffcf7b2f88 298 Pfam PF13276 HTH-like domain 5 47 5.3E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 370 390 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 48 446 1.3E-117 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 PANTHER PTHR11119:SF49 14 450 3.2E-184 T 21-04-2016 SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 23 450 2.9E-252 T 21-04-2016 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 PANTHER PTHR11119 14 450 3.2E-184 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_0981 782d971ec5ea4e33cfcff819e0daa37b 464 Pfam PF00860 Permease family 53 423 2.5E-102 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 PANTHER PTHR30435:SF2 1 134 1.8E-69 T 21-04-2016 SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 PANTHER PTHR30435 1 134 1.8E-69 T 21-04-2016 SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 2.4E-52 T 21-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.1E-10 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SDY_2077 055f9b2100d9ee5f187bbeea3978f686 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.1E-12 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SDY_1582 629e868598ae3db86d8313ee18eab973 427 PANTHER PTHR23508:SF6 1 420 0.0 T 21-04-2016 SDY_1582 629e868598ae3db86d8313ee18eab973 427 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 1 390 9.4E-135 T 21-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 SDY_1582 629e868598ae3db86d8313ee18eab973 427 SUPERFAMILY SSF103473 3 406 4.05E-55 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1582 629e868598ae3db86d8313ee18eab973 427 PANTHER PTHR23508 1 420 0.0 T 21-04-2016 SDY_1582 629e868598ae3db86d8313ee18eab973 427 Pfam PF07690 Major Facilitator Superfamily 27 315 1.1E-27 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1582 629e868598ae3db86d8313ee18eab973 427 Gene3D G3DSA:1.20.1250.20 213 402 1.3E-14 T 21-04-2016 SDY_1582 629e868598ae3db86d8313ee18eab973 427 Gene3D G3DSA:1.20.1250.20 29 194 2.4E-22 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 416 6.9E-237 T 21-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 Gene3D G3DSA:3.30.1540.10 246 326 2.6E-29 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 Pfam PF02515 CoA-transferase family III 5 393 3.8E-94 T 21-04-2016 IPR003673 CoA-transferase family III GO:0003824 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 65.223 T 21-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 SUPERFAMILY SSF89796 1 416 1.96E-125 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_2572 1e614e972284ed09b4e3d22238bef684 416 PANTHER PTHR24023:SF593 255 403 6.4E-31 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 PANTHER PTHR24023:SF593 36 213 6.4E-31 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 PANTHER PTHR24023 255 403 6.4E-31 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 PANTHER PTHR24023 36 213 6.4E-31 T 21-04-2016 SDY_2572 1e614e972284ed09b4e3d22238bef684 416 Gene3D G3DSA:3.40.50.10540 2 216 1.7E-101 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_2572 1e614e972284ed09b4e3d22238bef684 416 Gene3D G3DSA:3.40.50.10540 327 416 1.7E-101 T 21-04-2016 IPR023606 CoA-transferase family III domain SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 1.8E-47 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 PANTHER PTHR36571 4 129 2.5E-63 T 21-04-2016 SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 SUPERFAMILY SSF101756 31 127 1.57E-36 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 Gene3D G3DSA:2.40.50.200 30 129 7.1E-44 T 21-04-2016 IPR005220 Bacterial OB-fold SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.2E-66 T 21-04-2016 IPR016052 Bacteriophage 933W, L0136 SDY_3215 08a9b1348813752b10bb807c80c4b69b 130 PANTHER PTHR36571:SF1 4 129 2.5E-63 T 21-04-2016 SDY_1383 9a5e032b4349bffd6394c83a33b5582d 261 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 12 175 3.5E-48 T 21-04-2016 IPR010183 Bacteriophage lambda, Bet SDY_1383 9a5e032b4349bffd6394c83a33b5582d 261 Pfam PF03837 RecT family 24 182 6.8E-25 T 21-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 SUPERFAMILY SSF53822 61 331 1.4E-77 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 Gene3D G3DSA:3.40.50.2300 58 166 1.4E-47 T 21-04-2016 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-7 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-21 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 SUPERFAMILY SSF47413 1 59 4.74E-19 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 PANTHER PTHR30146:SF55 1 346 1.2E-208 T 21-04-2016 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 SMART SM00354 1 71 5.4E-36 T 21-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 PANTHER PTHR30146 1 346 1.2E-208 T 21-04-2016 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.5E-33 T 21-04-2016 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 Gene3D G3DSA:1.10.260.40 2 57 1.6E-26 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2129 4dfbdcd7c962110cf30c8582e4dc8950 346 Gene3D G3DSA:3.40.50.2300 167 330 1.8E-48 T 21-04-2016 SDY_0983 ae3f21c874920627f2a4f433c875092f 196 Gene3D G3DSA:3.40.109.10 5 193 2.8E-41 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_0983 ae3f21c874920627f2a4f433c875092f 196 PANTHER PTHR23026 1 192 1.3E-111 T 21-04-2016 SDY_0983 ae3f21c874920627f2a4f433c875092f 196 Pfam PF00881 Nitroreductase family 18 174 1.0E-13 T 21-04-2016 IPR029479 Nitroreductase SDY_0983 ae3f21c874920627f2a4f433c875092f 196 SUPERFAMILY SSF55469 13 192 9.55E-40 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_0983 ae3f21c874920627f2a4f433c875092f 196 PANTHER PTHR23026:SF110 1 192 1.3E-111 T 21-04-2016 SDY_0983 ae3f21c874920627f2a4f433c875092f 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.899 T 21-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 SDY_2414 f1ad083ebdd589083b243b9598e28657 242 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 14 100 2.4E-15 T 21-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family SDY_2414 f1ad083ebdd589083b243b9598e28657 242 Pfam PF03374 Phage antirepressor protein KilAC domain 128 229 1.8E-30 T 21-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 SMART SM00382 33 226 2.5E-7 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 PANTHER PTHR24220:SF380 3 222 2.2E-135 T 21-04-2016 SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 Gene3D G3DSA:3.40.50.300 1 222 4.9E-50 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 SUPERFAMILY SSF52540 2 223 2.21E-45 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 Pfam PF00005 ABC transporter 24 178 3.4E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 PANTHER PTHR24220 3 222 2.2E-135 T 21-04-2016 SDY_4120 acec23e06d0eadaa2f226b0994eca9cb 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 8.0E-112 T 21-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 Gene3D G3DSA:3.10.450.50 187 219 1.5E-12 T 21-04-2016 IPR032710 NTF2-like domain SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 PANTHER PTHR33747 1 221 1.1E-187 T 21-04-2016 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF02810 SEC-C motif 203 220 1.7E-10 T 21-04-2016 IPR004027 SEC-C motif SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF103642 201 220 1.05E-7 T 21-04-2016 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF101327 14 182 2.88E-23 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 PANTHER PTHR33747:SF2 1 221 1.1E-187 T 21-04-2016 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 1.7E-35 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_1110 bf94dd6b0d29d5a0baed2911e06ec564 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 2.8E-55 T 21-04-2016 IPR011978 Uncharacterised protein family UPF0149 SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 Gene3D G3DSA:3.40.30.10 1 115 6.9E-42 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 SUPERFAMILY SSF52833 1 115 9.61E-32 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 Pfam PF03960 ArsC family 5 114 1.3E-17 T 21-04-2016 IPR006660 Arsenate reductase-like SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 PANTHER PTHR30041:SF3 1 117 5.0E-45 T 21-04-2016 SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 PANTHER PTHR30041 1 117 5.0E-45 T 21-04-2016 SDY_2655 88b21f1c5a5fa60d035edce5b404b238 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 1.6E-34 T 21-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SDY_4085 624a1afab8fd261af2b7b3a7832b27f8 401 PANTHER PTHR36178:SF1 1 401 1.4E-205 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SDY_4085 624a1afab8fd261af2b7b3a7832b27f8 401 PANTHER PTHR36178 1 401 1.4E-205 T 21-04-2016 SDY_4085 624a1afab8fd261af2b7b3a7832b27f8 401 Pfam PF03616 Sodium/glutamate symporter 2 366 2.1E-164 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SDY_4085 624a1afab8fd261af2b7b3a7832b27f8 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.3E-205 T 21-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SDY_0283 95f4615526aca2e47b670267e247baf2 237 Gene3D G3DSA:3.30.420.10 66 226 1.8E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0283 95f4615526aca2e47b670267e247baf2 237 SUPERFAMILY SSF53098 65 229 7.13E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0283 95f4615526aca2e47b670267e247baf2 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0283 95f4615526aca2e47b670267e247baf2 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0283 95f4615526aca2e47b670267e247baf2 237 PANTHER PTHR32552 2 235 6.8E-62 T 21-04-2016 SDY_3025 3dca18030d360a2d65805a168ed98b5d 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.7E-23 T 21-04-2016 IPR006696 Protein of unknown function DUF423 SDY_3025 3dca18030d360a2d65805a168ed98b5d 131 PANTHER PTHR10584:SF191 6 67 9.3E-24 T 21-04-2016 SDY_3025 3dca18030d360a2d65805a168ed98b5d 131 PANTHER PTHR10584 6 67 9.3E-24 T 21-04-2016 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 PIRSF PIRSF004761 1 113 2.0E-36 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 21-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 PANTHER PTHR34535 2 113 2.7E-62 T 21-04-2016 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.8E-44 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 PANTHER PTHR34535:SF2 2 113 2.7E-62 T 21-04-2016 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 3.4E-31 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_3082 5290b8d74bd8301bddeb874152f9be38 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.088 T 21-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 PANTHER PTHR30472 244 660 3.5E-216 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 PANTHER PTHR30472:SF16 244 660 3.5E-216 T 21-04-2016 SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 Gene3D G3DSA:1.10.3470.10 7 327 1.3E-73 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 Gene3D G3DSA:1.10.3470.10 344 659 1.2E-82 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 SUPERFAMILY SSF81345 7 325 6.67E-59 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 Pfam PF01032 FecCD transport family 359 657 3.3E-75 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 Pfam PF01032 FecCD transport family 14 323 2.1E-63 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_0169 ab8022c995346d1c3cc1a659f43c4929 660 SUPERFAMILY SSF81345 345 657 7.06E-73 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1546 b0b97b1fafbb337eb59c86e55531e4ce 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 3.0E-45 T 21-04-2016 IPR009707 Membrane protein GlpM/YdgC SDY_1546 b0b97b1fafbb337eb59c86e55531e4ce 111 Pfam PF06942 GlpM protein 5 111 5.2E-50 T 21-04-2016 IPR009707 Membrane protein GlpM/YdgC SDY_3076 1484a4d12dd242646e23356a535709ae 372 Gene3D G3DSA:3.40.50.700 47 222 2.0E-60 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 365 6.1E-197 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 Gene3D G3DSA:4.10.480.10 224 299 1.2E-31 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SDY_3076 1484a4d12dd242646e23356a535709ae 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 3.2E-32 T 21-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 4.4E-6 T 21-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SDY_3076 1484a4d12dd242646e23356a535709ae 372 PIRSF PIRSF000310 2 367 3.1E-136 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PANTHER PTHR30013:SF8 1 369 8.4E-293 T 21-04-2016 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.6E-69 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 PANTHER PTHR30013 1 369 8.4E-293 T 21-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SDY_3076 1484a4d12dd242646e23356a535709ae 372 SUPERFAMILY SSF56770 44 302 1.07E-84 T 21-04-2016 SDY_3076 1484a4d12dd242646e23356a535709ae 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 302 1.2E-26 T 21-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SDY_3268 ebf74cc4680695f19342263c603bc162 179 Pfam PF01863 Protein of unknown function DUF45 105 161 3.9E-11 T 21-04-2016 IPR002725 Protein of unknown function DUF45 SDY_3268 ebf74cc4680695f19342263c603bc162 179 PANTHER PTHR30399:SF4 1 174 1.2E-113 T 21-04-2016 SDY_3268 ebf74cc4680695f19342263c603bc162 179 PANTHER PTHR30399 1 174 1.2E-113 T 21-04-2016 SDY_1055 ac74b31f6f60ebb3bba11a5ebb93abcf 125 Pfam PF03400 IS1 transposase 1 125 1.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1055 ac74b31f6f60ebb3bba11a5ebb93abcf 125 PANTHER PTHR33293 1 124 3.2E-42 T 21-04-2016 SDY_2288 ac74b31f6f60ebb3bba11a5ebb93abcf 125 Pfam PF03400 IS1 transposase 1 125 1.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2288 ac74b31f6f60ebb3bba11a5ebb93abcf 125 PANTHER PTHR33293 1 124 3.2E-42 T 21-04-2016 SDY_0374 ac74b31f6f60ebb3bba11a5ebb93abcf 125 Pfam PF03400 IS1 transposase 1 125 1.2E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0374 ac74b31f6f60ebb3bba11a5ebb93abcf 125 PANTHER PTHR33293 1 124 3.2E-42 T 21-04-2016 SDY_1625 98538f64a8a5b01844f97f2626028d85 252 SUPERFAMILY SSF53335 9 250 5.27E-35 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1625 98538f64a8a5b01844f97f2626028d85 252 Gene3D G3DSA:1.10.150.290 132 230 5.3E-30 T 21-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SDY_1625 98538f64a8a5b01844f97f2626028d85 252 Gene3D G3DSA:3.40.50.150 22 131 2.1E-21 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1625 98538f64a8a5b01844f97f2626028d85 252 PANTHER PTHR10108:SF890 3 229 1.0E-108 T 21-04-2016 SDY_1625 98538f64a8a5b01844f97f2626028d85 252 PANTHER PTHR10108 3 229 1.0E-108 T 21-04-2016 SDY_1625 98538f64a8a5b01844f97f2626028d85 252 Pfam PF13489 Methyltransferase domain 13 176 8.9E-18 T 21-04-2016 SDY_1625 98538f64a8a5b01844f97f2626028d85 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 48.6 T 21-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 PANTHER PTHR34227 1 183 9.5E-87 T 21-04-2016 SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 PANTHER PTHR34227:SF2 1 183 9.5E-87 T 21-04-2016 SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 PIRSF PIRSF004690 1 184 1.4E-57 T 21-04-2016 IPR026269 Tat proofreading chaperone DmsD-type SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 SUPERFAMILY SSF89155 2 180 3.53E-44 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 Gene3D G3DSA:1.10.3480.10 1 182 2.0E-50 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_1002 f58b7de731a0ea9000f55b1c0a6d5e16 184 Pfam PF02613 Nitrate reductase delta subunit 36 147 6.4E-14 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_2191 779cc2ac92a2f211922abe39167e0023 253 SUPERFAMILY SSF81606 10 147 2.62E-6 T 21-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SDY_2191 779cc2ac92a2f211922abe39167e0023 253 Pfam PF13672 Protein phosphatase 2C 11 220 5.4E-43 T 21-04-2016 SDY_1925 7e817de610c39e857766bd15bbeed506 237 SMART SM00530 22 77 2.5E-8 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1925 7e817de610c39e857766bd15bbeed506 237 SUPERFAMILY SSF51306 138 232 3.84E-28 T 21-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SDY_1925 7e817de610c39e857766bd15bbeed506 237 Gene3D G3DSA:2.10.109.10 138 232 8.9E-35 T 21-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SDY_1925 7e817de610c39e857766bd15bbeed506 237 Pfam PF01381 Helix-turn-helix 27 76 2.6E-10 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_1925 7e817de610c39e857766bd15bbeed506 237 Pfam PF00717 Peptidase S24-like 145 218 1.5E-16 T 21-04-2016 IPR019759 Peptidase S24/S26A/S26B SDY_1925 7e817de610c39e857766bd15bbeed506 237 PANTHER PTHR33516 4 236 2.8E-58 T 21-04-2016 SDY_1925 7e817de610c39e857766bd15bbeed506 237 Gene3D G3DSA:1.10.260.40 7 85 2.0E-33 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1925 7e817de610c39e857766bd15bbeed506 237 PANTHER PTHR33516:SF3 4 236 2.8E-58 T 21-04-2016 SDY_1925 7e817de610c39e857766bd15bbeed506 237 SUPERFAMILY SSF47413 3 91 4.56E-23 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 Gene3D G3DSA:3.40.50.1000 16 181 1.6E-49 T 21-04-2016 IPR023214 HAD-like domain SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 4.0E-11 T 21-04-2016 IPR023214 HAD-like domain SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 9.3E-78 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 PANTHER PTHR21485 5 186 1.2E-71 T 21-04-2016 SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 SUPERFAMILY SSF56784 22 181 1.97E-41 T 21-04-2016 IPR023214 HAD-like domain SDY_3379 f4baa5ce636807ed5876dbd3f737e4c6 188 PIRSF PIRSF006118 13 188 1.0E-74 T 21-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_1747 e6a3efe24ba417685940c341c057e785 197 PANTHER PTHR10108:SF927 5 193 2.9E-88 T 21-04-2016 SDY_1747 e6a3efe24ba417685940c341c057e785 197 SUPERFAMILY SSF53335 7 196 8.21E-34 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1747 e6a3efe24ba417685940c341c057e785 197 PANTHER PTHR10108 5 193 2.9E-88 T 21-04-2016 SDY_1747 e6a3efe24ba417685940c341c057e785 197 Gene3D G3DSA:3.40.50.150 7 196 4.6E-39 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1747 e6a3efe24ba417685940c341c057e785 197 Pfam PF03848 Tellurite resistance protein TehB 1 193 3.2E-110 T 21-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain SDY_1747 e6a3efe24ba417685940c341c057e785 197 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 2.9E-113 T 21-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 Gene3D G3DSA:3.30.160.60 303 339 7.6E-18 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 PANTHER PTHR30518 3 340 6.6E-99 T 21-04-2016 SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 Gene3D G3DSA:3.30.160.60 71 109 2.2E-23 T 21-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 8.7E-158 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 Pfam PF02618 YceG-like family 43 328 4.5E-78 T 21-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SDY_2053 1ea014c935c3089fcb8a4fd1104dad2e 340 PANTHER PTHR30518:SF2 3 340 6.6E-99 T 21-04-2016 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 PANTHER PTHR13794:SF8 6 312 9.8E-111 T 21-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 Gene3D G3DSA:3.30.390.10 1 125 5.9E-49 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 317 22.914 T 21-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 Gene3D G3DSA:3.20.20.120 126 302 3.5E-36 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 6.6E-135 T 21-04-2016 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 SUPERFAMILY SSF51604 104 307 2.49E-50 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 PANTHER PTHR13794 6 312 9.8E-111 T 21-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 SUPERFAMILY SSF54826 1 97 3.49E-30 T 21-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 SMART SM00922 114 209 6.3E-11 T 21-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SDY_2457 1fe0536e9c677f73701f2ab2f32fd868 320 Pfam PF13378 Enolase C-terminal domain-like 124 279 2.0E-16 T 21-04-2016 IPR029065 Enolase C-terminal domain-like SDY_3327 bb8f65db862560db23787efa9169e5aa 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 131 2.1E-60 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 SDY_3327 bb8f65db862560db23787efa9169e5aa 131 Gene3D G3DSA:3.40.1350.10 24 128 3.2E-37 T 21-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SDY_3327 bb8f65db862560db23787efa9169e5aa 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 8.1E-24 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 SDY_3327 bb8f65db862560db23787efa9169e5aa 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.601 T 21-04-2016 IPR003509 Uncharacterised protein family UPF0102 SDY_3327 bb8f65db862560db23787efa9169e5aa 131 SUPERFAMILY SSF52980 17 125 5.15E-23 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_3327 bb8f65db862560db23787efa9169e5aa 131 PANTHER PTHR34039 12 131 3.3E-43 T 21-04-2016 SDY_3327 bb8f65db862560db23787efa9169e5aa 131 PANTHER PTHR34039:SF1 12 131 3.3E-43 T 21-04-2016 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 PIRSF PIRSF038992 10 268 3.2E-85 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 Gene3D G3DSA:3.20.20.70 14 263 2.8E-76 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 PANTHER PTHR11627:SF18 50 180 5.1E-18 T 21-04-2016 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 SUPERFAMILY SSF51569 14 254 8.06E-65 T 21-04-2016 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 PANTHER PTHR11627 50 180 5.1E-18 T 21-04-2016 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 SMART SM01133 30 238 9.0E-29 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_1623 00a2969ae8a81f46f0d673fc09765994 270 Pfam PF01791 DeoC/LacD family aldolase 31 237 1.0E-17 T 21-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 7.2E-22 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.1E-36 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 PANTHER PTHR33231:SF3 1 113 1.9E-71 T 21-04-2016 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 SUPERFAMILY SSF69754 3 111 8.37E-34 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 PANTHER PTHR33231 1 113 1.9E-71 T 21-04-2016 SDY_2768 56a38ea72f0be578bfef7f17b93bd275 113 Gene3D G3DSA:3.30.160.100 3 91 1.2E-32 T 21-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 SUPERFAMILY SSF52172 8 128 1.04E-31 T 21-04-2016 IPR011006 CheY-like superfamily SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.331 T 21-04-2016 IPR028616 Regulator of RpoS SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 SMART SM00448 8 120 1.3E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 PANTHER PTHR26402:SF554 8 152 1.1E-104 T 21-04-2016 SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 Pfam PF00072 Response regulator receiver domain 10 120 2.6E-28 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 PANTHER PTHR26402 8 152 1.1E-104 T 21-04-2016 SDY_1287 fca79e291204297a9c2134d6157ee2b0 337 Gene3D G3DSA:3.40.50.2300 7 124 1.7E-30 T 21-04-2016 SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 PANTHER PTHR32303 1 392 5.0E-215 T 21-04-2016 SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SUPERFAMILY SSF50998 25 382 2.01E-79 T 21-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 1.0E-132 T 21-04-2016 IPR017687 Outer membrane protein assembly factor BamB SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 Gene3D G3DSA:2.140.10.10 3 390 7.1E-78 T 21-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 114 146 1.3E-4 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 65 96 4.1E-5 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 155 186 5.3E-5 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 289 320 310.0 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 200 231 66.0 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 251 282 7.7E-5 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 SMART SM00564 329 361 1.6E-4 T 21-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 Pfam PF13360 PQQ-like domain 78 319 9.9E-53 T 21-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 PANTHER PTHR32303:SF8 1 392 5.0E-215 T 21-04-2016 SDY_2708 11e83d0da51cd4cfe60ac1337b9b4a23 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.769 T 21-04-2016 IPR017687 Outer membrane protein assembly factor BamB SDY_2137 a531f7a0e0211f6aa9dae44653306a26 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 286 4.0E-49 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_2137 a531f7a0e0211f6aa9dae44653306a26 297 PANTHER PTHR32196 1 297 6.7E-209 T 21-04-2016 SDY_2137 a531f7a0e0211f6aa9dae44653306a26 297 PANTHER PTHR32196:SF18 1 297 6.7E-209 T 21-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 SDY_2909 487586091605c815c1ee9cb28060770f 750 Pfam PF07503 HypF finger 158 191 2.2E-16 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SDY_2909 487586091605c815c1ee9cb28060770f 750 Pfam PF07503 HypF finger 108 141 5.6E-16 T 21-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SDY_2909 487586091605c815c1ee9cb28060770f 750 PANTHER PTHR10029:SF4 9 747 0.0 T 21-04-2016 SDY_2909 487586091605c815c1ee9cb28060770f 750 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 0.0 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SDY_2909 487586091605c815c1ee9cb28060770f 750 SUPERFAMILY SSF55821 175 379 1.68E-44 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_2909 487586091605c815c1ee9cb28060770f 750 PANTHER PTHR10029 9 747 0.0 T 21-04-2016 SDY_2909 487586091605c815c1ee9cb28060770f 750 Gene3D G3DSA:3.90.870.10 198 369 1.8E-44 T 21-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SDY_2909 487586091605c815c1ee9cb28060770f 750 Pfam PF00708 Acylphosphatase 9 91 4.7E-18 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_2909 487586091605c815c1ee9cb28060770f 750 Gene3D G3DSA:3.30.70.100 4 91 3.3E-28 T 21-04-2016 SDY_2909 487586091605c815c1ee9cb28060770f 750 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 21-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_2909 487586091605c815c1ee9cb28060770f 750 PIRSF PIRSF006256 4 748 2.7E-278 T 21-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SDY_2909 487586091605c815c1ee9cb28060770f 750 SUPERFAMILY SSF54975 7 91 8.5E-21 T 21-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SDY_2909 487586091605c815c1ee9cb28060770f 750 Pfam PF01300 Telomere recombination 210 373 8.4E-47 T 21-04-2016 IPR006070 YrdC-like domain GO:0003725 SDY_4124 b81a8b558a38cc8647e70910ad0103ac 252 SUPERFAMILY SSF56281 5 249 4.98E-32 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_4124 b81a8b558a38cc8647e70910ad0103ac 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 6.0E-127 T 21-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 SDY_4124 b81a8b558a38cc8647e70910ad0103ac 252 Gene3D G3DSA:3.60.15.10 2 251 3.9E-58 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_4124 b81a8b558a38cc8647e70910ad0103ac 252 Pfam PF12706 Beta-lactamase superfamily domain 68 223 2.3E-13 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_1454 5c3fb4d76fab2ac74190a4ef8b19fdae 285 Pfam PF00950 ABC 3 transport family 10 265 2.6E-75 T 21-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SDY_1454 5c3fb4d76fab2ac74190a4ef8b19fdae 285 PANTHER PTHR30477 2 271 6.4E-139 T 21-04-2016 SDY_1454 5c3fb4d76fab2ac74190a4ef8b19fdae 285 Gene3D G3DSA:1.10.3470.10 53 251 9.2E-7 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1454 5c3fb4d76fab2ac74190a4ef8b19fdae 285 PANTHER PTHR30477:SF9 2 271 6.4E-139 T 21-04-2016 SDY_1454 5c3fb4d76fab2ac74190a4ef8b19fdae 285 SUPERFAMILY SSF81345 6 261 4.71E-35 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_2860 3c917bf33050e0d909bf50a6af0a7b76 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.851 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 SDY_2860 3c917bf33050e0d909bf50a6af0a7b76 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 1.0E-73 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 SDY_2860 3c917bf33050e0d909bf50a6af0a7b76 149 Pfam PF06610 L-alanine exporter 4 141 1.4E-68 T 21-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 PANTHER PTHR30158 1 375 5.6E-215 T 21-04-2016 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 SUPERFAMILY SSF111369 52 300 2.35E-89 T 21-04-2016 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 Gene3D G3DSA:2.40.50.100 173 208 1.3E-25 T 21-04-2016 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 Gene3D G3DSA:2.40.50.100 65 98 1.3E-25 T 21-04-2016 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 293 2.0E-13 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 5.6E-86 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 5.7E-14 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_0456 c7276192ddd538cf7072fa0d8326e418 397 PANTHER PTHR30158:SF4 1 375 5.6E-215 T 21-04-2016 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 SMART SM00895 96 220 5.6E-16 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 PANTHER PTHR11751:SF421 1 112 4.5E-60 T 21-04-2016 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 SUPERFAMILY SSF46785 2 76 2.61E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 Gene3D G3DSA:1.20.120.530 95 225 5.4E-22 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 SMART SM00345 13 72 9.2E-26 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 Pfam PF07729 FCD domain 96 219 9.3E-19 T 21-04-2016 IPR011711 GntR, C-terminal SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.5E-22 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 PANTHER PTHR11751 1 112 4.5E-60 T 21-04-2016 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 Gene3D G3DSA:1.10.10.10 5 77 3.8E-24 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 SUPERFAMILY SSF48008 94 222 8.89E-21 T 21-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_3281 e82b4512adbc0042ed63ebf37ff0b305 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 PANTHER PTHR23514:SF12 6 394 3.0E-276 T 21-04-2016 SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 Pfam PF07690 Major Facilitator Superfamily 223 388 5.0E-17 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 PANTHER PTHR23514 6 394 3.0E-276 T 21-04-2016 SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 SUPERFAMILY SSF103473 11 390 4.97E-44 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 Gene3D G3DSA:1.20.1250.20 11 186 1.3E-11 T 21-04-2016 SDY_0751 0775b94b56814a9e8de12c8319609ca3 402 Gene3D G3DSA:1.20.1250.20 215 396 1.4E-23 T 21-04-2016 SDY_2696 5e2777069dc3cfa1cc66e785831ad0dd 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 1.1E-30 T 21-04-2016 IPR022576 Protein of unknown function DUF2633 SDY_2696 5e2777069dc3cfa1cc66e785831ad0dd 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 2.0E-29 T 21-04-2016 IPR022576 Protein of unknown function DUF2633 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 Pfam PF01835 MG2 domain 314 410 1.2E-17 T 21-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 630 776 5.0E-11 T 21-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 SMART SM01359 630 776 2.5E-27 T 21-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 SUPERFAMILY SSF48239 1027 1118 1.15E-5 T 21-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 SMART SM01360 841 932 2.4E-17 T 21-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 PANTHER PTHR11412 843 909 5.2E-45 T 21-04-2016 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 PANTHER PTHR11412 283 607 5.2E-45 T 21-04-2016 SDY_0852 6e170c868ac4e870c1536c55c3881e35 1504 Pfam PF00207 Alpha-2-macroglobulin family 841 924 1.2E-14 T 21-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 SDY_2598 94814ce1a83254857e325711474aaf84 402 Pfam PF01385 Probable transposase 162 275 1.2E-30 T 21-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 SDY_2598 94814ce1a83254857e325711474aaf84 402 PANTHER PTHR30405 296 389 4.3E-132 T 21-04-2016 SDY_2598 94814ce1a83254857e325711474aaf84 402 PANTHER PTHR30405 3 280 4.3E-132 T 21-04-2016 SDY_2598 94814ce1a83254857e325711474aaf84 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.1E-24 T 21-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SDY_2598 94814ce1a83254857e325711474aaf84 402 Pfam PF12323 Helix-turn-helix domain 4 48 1.6E-13 T 21-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain SDY_2598 94814ce1a83254857e325711474aaf84 402 PANTHER PTHR30405:SF5 296 389 4.3E-132 T 21-04-2016 SDY_2598 94814ce1a83254857e325711474aaf84 402 PANTHER PTHR30405:SF5 3 280 4.3E-132 T 21-04-2016 SDY_2598 94814ce1a83254857e325711474aaf84 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 243 331 2.3E-10 T 21-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 21-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PANTHER PTHR30371 4 258 3.0E-123 T 21-04-2016 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.6E-67 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 243 18.256 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 7.6E-81 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.1E-50 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.1E-50 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.1E-50 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.1E-50 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_3905 704256b685b7a66ac039682b0ea0c7d6 258 PANTHER PTHR30371:SF0 4 258 3.0E-123 T 21-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SDY_0821 19ba477da9728b4baf6e1e7f9d42db44 150 Gene3D G3DSA:3.90.1170.40 4 150 2.7E-57 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0821 19ba477da9728b4baf6e1e7f9d42db44 150 SUPERFAMILY SSF54690 6 150 2.48E-54 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_0821 19ba477da9728b4baf6e1e7f9d42db44 150 PANTHER PTHR23404 5 150 1.6E-45 T 21-04-2016 SDY_0821 19ba477da9728b4baf6e1e7f9d42db44 150 Pfam PF02391 MoaE protein 11 121 2.7E-36 T 21-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 SUPERFAMILY SSF53335 76 431 4.04E-94 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 21-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 PANTHER PTHR11061 14 433 3.2E-137 T 21-04-2016 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 21-04-2016 IPR030390 RNA methyltransferase TrmA, active site SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 1.2E-169 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 SUPERFAMILY SSF50249 2 67 3.6E-13 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 PANTHER PTHR11061:SF30 14 433 3.2E-137 T 21-04-2016 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 66.748 T 21-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 116 431 4.6E-28 T 21-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 Gene3D G3DSA:3.40.50.150 250 431 8.9E-64 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 Gene3D G3DSA:2.40.50.140 2 87 4.0E-31 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3002 0e7543a659e54098c696696ed3f4cb52 433 Pfam PF01938 TRAM domain 11 67 2.5E-12 T 21-04-2016 IPR002792 TRAM domain SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 SUPERFAMILY SSF47413 83 137 1.47E-6 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 PANTHER PTHR40455 1 138 6.7E-43 T 21-04-2016 SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 SMART SM00530 83 136 4.3E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 Gene3D G3DSA:1.10.260.40 82 137 6.2E-9 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 Pfam PF01381 Helix-turn-helix 84 135 5.2E-6 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_3266 2468cdded742a4d091663fd5c8d85d9e 138 PANTHER PTHR40455:SF1 1 138 6.7E-43 T 21-04-2016 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Pfam PF03459 TOBE domain 199 257 9.0E-14 T 21-04-2016 IPR005116 Transport-associated OB, type 1 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Pfam PF03459 TOBE domain 125 187 3.7E-12 T 21-04-2016 IPR005116 Transport-associated OB, type 1 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 SUPERFAMILY SSF46785 2 106 5.01E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Gene3D G3DSA:1.10.10.10 1 119 3.2E-42 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0708 1f2df7d153705c6fe459ea5135380278 262 SUPERFAMILY SSF50331 123 192 2.92E-17 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_0708 1f2df7d153705c6fe459ea5135380278 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 8.5E-41 T 21-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Gene3D G3DSA:2.40.50.100 185 252 5.6E-23 T 21-04-2016 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 PANTHER PTHR30432 1 262 2.5E-73 T 21-04-2016 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Gene3D G3DSA:2.40.50.100 120 184 8.8E-32 T 21-04-2016 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 SUPERFAMILY SSF50331 200 259 1.74E-14 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_0708 1f2df7d153705c6fe459ea5135380278 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.9E-13 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 3.2E-28 T 21-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SDY_0708 1f2df7d153705c6fe459ea5135380278 262 PIRSF PIRSF005763 1 262 6.0E-101 T 21-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SDY_1864 b2a03d2e7fe3b375a54295440bd78a9a 155 PANTHER PTHR35603:SF1 1 155 1.6E-55 T 21-04-2016 SDY_1864 b2a03d2e7fe3b375a54295440bd78a9a 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 2.4E-7 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SDY_1864 b2a03d2e7fe3b375a54295440bd78a9a 155 PANTHER PTHR35603 1 155 1.6E-55 T 21-04-2016 SDY_2858 7cf284638b4586a7c66e95f4f7354ba7 172 SUPERFAMILY SSF52821 2 154 1.96E-25 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2858 7cf284638b4586a7c66e95f4f7354ba7 172 Gene3D G3DSA:3.40.250.10 4 107 8.2E-19 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2858 7cf284638b4586a7c66e95f4f7354ba7 172 Pfam PF00581 Rhodanese-like domain 7 99 1.6E-10 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_2858 7cf284638b4586a7c66e95f4f7354ba7 172 Pfam PF11127 Protein of unknown function (DUF2892) 115 167 1.6E-10 T 21-04-2016 IPR021309 Protein of unknown function DUF2892 SDY_2858 7cf284638b4586a7c66e95f4f7354ba7 172 SMART SM00450 6 102 1.3E-15 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_3959 c289d9998dbe973df20e15e020d56328 293 Pfam PF00483 Nucleotidyl transferase 2 238 4.9E-72 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SDY_3959 c289d9998dbe973df20e15e020d56328 293 PANTHER PTHR22572 2 268 2.0E-165 T 21-04-2016 SDY_3959 c289d9998dbe973df20e15e020d56328 293 SUPERFAMILY SSF53448 1 286 2.7E-91 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3959 c289d9998dbe973df20e15e020d56328 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.8E-160 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_3959 c289d9998dbe973df20e15e020d56328 293 Gene3D G3DSA:3.90.550.10 1 264 3.6E-65 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_3959 c289d9998dbe973df20e15e020d56328 293 PANTHER PTHR22572:SF105 2 268 2.0E-165 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_3078 cd9f5956f94fc8cb7105b18e978d56f7 392 PANTHER PTHR30074:SF4 2 391 2.4E-273 T 21-04-2016 SDY_3078 cd9f5956f94fc8cb7105b18e978d56f7 392 PANTHER PTHR30074 2 391 2.4E-273 T 21-04-2016 SDY_3078 cd9f5956f94fc8cb7105b18e978d56f7 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 1.8E-18 T 21-04-2016 IPR005614 NrfD family SDY_0154 e65a8252febb927ad366620cf01ceb09 264 PIRSF PIRSF000388 1 264 1.7E-98 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.199 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 Gene3D G3DSA:3.20.20.60 1 264 1.1E-110 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 PANTHER PTHR20881 1 263 4.0E-189 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 1.6E-129 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 PANTHER PTHR20881:SF3 1 263 4.0E-189 T 21-04-2016 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 6.3E-106 T 21-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SDY_0154 e65a8252febb927ad366620cf01ceb09 264 SUPERFAMILY SSF51621 4 263 3.01E-104 T 21-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 PANTHER PTHR12001:SF47 8 323 3.0E-128 T 21-04-2016 SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 PANTHER PTHR12001 8 323 3.0E-128 T 21-04-2016 IPR017446 Polyprenyl synthetase-related SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 SUPERFAMILY SSF48576 6 322 6.48E-101 T 21-04-2016 IPR008949 Isoprenoid synthase domain SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 Gene3D G3DSA:1.10.600.10 3 322 2.7E-104 T 21-04-2016 IPR008949 Isoprenoid synthase domain SDY_3368 0e7b28dedbd62edf0676e0d58367e5be 323 Pfam PF00348 Polyprenyl synthetase 30 263 1.2E-75 T 21-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 Gene3D G3DSA:3.40.50.360 4 132 8.0E-59 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 PANTHER PTHR37297 2 135 1.2E-53 T 21-04-2016 SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 PANTHER PTHR37297:SF1 2 135 1.2E-53 T 21-04-2016 SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 Pfam PF07972 NrdI Flavodoxin like 5 122 1.6E-48 T 21-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 PIRSF PIRSF005087 1 136 1.6E-55 T 21-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.775 T 21-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 SUPERFAMILY SSF52218 2 131 7.41E-24 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_2867 a39de95fcf39aa7803dd2163af0ca104 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 2.1E-62 T 21-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SDY_0707 4f30da90c488383b69225e29d28c9bca 490 Gene3D G3DSA:3.40.50.300 10 228 6.9E-35 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0707 4f30da90c488383b69225e29d28c9bca 490 PANTHER PTHR24220:SF557 3 384 1.6E-208 T 21-04-2016 SDY_0707 4f30da90c488383b69225e29d28c9bca 490 Pfam PF00005 ABC transporter 276 429 5.1E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0707 4f30da90c488383b69225e29d28c9bca 490 Pfam PF00005 ABC transporter 23 163 7.0E-18 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0707 4f30da90c488383b69225e29d28c9bca 490 SUPERFAMILY SSF52540 10 226 3.17E-36 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0707 4f30da90c488383b69225e29d28c9bca 490 Gene3D G3DSA:3.40.50.300 254 467 5.1E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0707 4f30da90c488383b69225e29d28c9bca 490 PANTHER PTHR24220 3 384 1.6E-208 T 21-04-2016 SDY_0707 4f30da90c488383b69225e29d28c9bca 490 SUPERFAMILY SSF52540 252 480 9.15E-41 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0707 4f30da90c488383b69225e29d28c9bca 490 SMART SM00382 28 219 1.9E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0707 4f30da90c488383b69225e29d28c9bca 490 SMART SM00382 285 479 2.6E-8 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0777 72687302febc400acb6aaa54e09d2bef 306 PANTHER PTHR30582:SF8 35 306 1.2E-227 T 21-04-2016 SDY_0777 72687302febc400acb6aaa54e09d2bef 306 Gene3D G3DSA:2.40.440.10 93 233 2.0E-33 T 21-04-2016 SDY_0777 72687302febc400acb6aaa54e09d2bef 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 3.1E-17 T 21-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SDY_0777 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 177 233 5.1E-26 T 21-04-2016 SDY_0777 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 99 149 5.1E-26 T 21-04-2016 SDY_0777 72687302febc400acb6aaa54e09d2bef 306 PANTHER PTHR30582 35 306 1.2E-227 T 21-04-2016 SDY_0072 d02687610446e0d1e8469e0a67d3cf14 77 Gene3D G3DSA:1.10.1220.10 4 44 2.8E-5 T 21-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SDY_0072 d02687610446e0d1e8469e0a67d3cf14 77 Pfam PF07362 Post-segregation antitoxin CcdA 8 77 4.2E-26 T 21-04-2016 IPR009956 Post-segregation antitoxin CcdA SDY_3469 923f5548b6bce765adb70557437d50f3 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 7.6E-24 T 21-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain SDY_3469 923f5548b6bce765adb70557437d50f3 122 PANTHER PTHR39158 1 122 5.5E-47 T 21-04-2016 SDY_1168 10bf2b136d7e76cf4539f28f5a1cddd6 131 Pfam PF01124 MAPEG family 3 120 1.5E-26 T 21-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein SDY_1168 10bf2b136d7e76cf4539f28f5a1cddd6 131 PANTHER PTHR35814 1 131 1.8E-75 T 21-04-2016 SDY_1168 10bf2b136d7e76cf4539f28f5a1cddd6 131 PANTHER PTHR35814:SF2 1 131 1.8E-75 T 21-04-2016 SDY_1168 10bf2b136d7e76cf4539f28f5a1cddd6 131 Gene3D G3DSA:1.20.120.550 4 127 4.1E-23 T 21-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain SDY_1168 10bf2b136d7e76cf4539f28f5a1cddd6 131 SUPERFAMILY SSF161084 4 127 4.97E-31 T 21-04-2016 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 Gene3D G3DSA:3.40.50.2300 7 129 9.9E-35 T 21-04-2016 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 236 3.3E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 PANTHER PTHR26402 9 240 3.0E-69 T 21-04-2016 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 SMART SM00862 160 236 5.2E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 Pfam PF00072 Response regulator receiver domain 11 121 1.8E-24 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 SMART SM00448 9 121 1.8E-34 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 SUPERFAMILY SSF52172 6 129 5.55E-35 T 21-04-2016 IPR011006 CheY-like superfamily SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 PANTHER PTHR26402:SF292 9 240 3.0E-69 T 21-04-2016 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 SUPERFAMILY SSF46894 137 237 1.76E-24 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4134 fb1ebd651947f804def92e60e9ef3179 241 Gene3D G3DSA:1.10.10.10 136 239 2.9E-26 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2769 3e7c4be17638a452f9a60e96944dda8d 394 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 9.9E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_2769 3e7c4be17638a452f9a60e96944dda8d 394 SUPERFAMILY SSF53098 111 378 3.49E-28 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2769 3e7c4be17638a452f9a60e96944dda8d 394 PANTHER PTHR37529 3 383 1.2E-70 T 21-04-2016 SDY_2769 3e7c4be17638a452f9a60e96944dda8d 394 Pfam PF01609 Transposase DDE domain 128 352 4.5E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.268 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 SUPERFAMILY SSF51569 3 278 1.1E-103 T 21-04-2016 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 Pfam PF00793 DAHP synthetase I family 10 274 2.0E-68 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 PANTHER PTHR21057:SF6 1 284 9.9E-232 T 21-04-2016 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.0E-118 T 21-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 Gene3D G3DSA:3.20.20.70 18 281 1.1E-108 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_1264 d63d61068f94d5289d7c8b5c6079f26a 284 PANTHER PTHR21057 1 284 9.9E-232 T 21-04-2016 SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 Pfam PF08543 Phosphomethylpyrimidine kinase 68 256 8.1E-16 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 2 287 54.006 T 21-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 PANTHER PTHR10534 1 287 1.8E-144 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 286 4.5E-145 T 21-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 SUPERFAMILY SSF53613 1 281 4.05E-77 T 21-04-2016 IPR029056 Ribokinase-like SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 Gene3D G3DSA:3.40.1190.20 1 286 2.2E-88 T 21-04-2016 IPR029056 Ribokinase-like SDY_1859 2fe4609053f7dd4e1e73be2f0ebfa7b5 287 PANTHER PTHR10534:SF0 1 287 1.8E-144 T 21-04-2016 SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 Gene3D G3DSA:3.40.50.80 135 252 2.3E-20 T 21-04-2016 SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 132 3.7E-35 T 21-04-2016 IPR013113 FAD-binding 9, siderophore-interacting SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 PANTHER PTHR30157:SF1 2 253 1.9E-118 T 21-04-2016 SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 Gene3D G3DSA:2.40.30.10 11 131 3.4E-34 T 21-04-2016 SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 SUPERFAMILY SSF63380 3 137 2.21E-16 T 21-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 Pfam PF04954 Siderophore-interacting protein 142 253 2.1E-20 T 21-04-2016 IPR007037 Siderophore-interacting protein SDY_3254 55b99540f86c776c4ab751ae89d62d5b 254 PANTHER PTHR30157 2 253 1.9E-118 T 21-04-2016 SDY_1541 80ee582081650fc1058f330ea6212f00 112 Pfam PF04355 SmpA / OmlA family 33 96 4.0E-11 T 21-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 PANTHER PTHR30108:SF1 1 497 1.7E-286 T 21-04-2016 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.489 T 21-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 6.4E-172 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 2.7E-191 T 21-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 SUPERFAMILY SSF50475 6 325 3.45E-128 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 PANTHER PTHR30108 1 497 1.7E-286 T 21-04-2016 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 21-04-2016 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 Gene3D G3DSA:1.20.5.570 458 497 7.7E-23 T 21-04-2016 SDY_3902 605f9c4e6cf56fd14292d78f0edf48d9 497 SUPERFAMILY SSF143968 326 489 3.4E-66 T 21-04-2016 SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 SUPERFAMILY SSF53335 55 210 3.35E-27 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 Pfam PF05175 Methyltransferase small domain 86 170 1.8E-12 T 21-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 Gene3D G3DSA:3.40.50.150 72 278 1.8E-38 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 159 165 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 PANTHER PTHR18895:SF73 74 275 2.8E-94 T 21-04-2016 SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 51 285 56.23 T 21-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 SDY_2816 11aa38a4cd3bc713921b499c6f545653 285 PANTHER PTHR18895 74 275 2.8E-94 T 21-04-2016 SDY_2649 9ae7ae67627be243c63328b9aa9e0c33 355 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 7.4E-97 T 21-04-2016 IPR009560 Protein of unknown function DUF1176 SDY_3282 c73ca6950ef645f2f22a23b5c138d8f4 220 PANTHER PTHR30353 1 216 2.4E-173 T 21-04-2016 IPR032818 DedA family SDY_3282 c73ca6950ef645f2f22a23b5c138d8f4 220 Pfam PF09335 SNARE associated Golgi protein 48 173 7.8E-22 T 21-04-2016 IPR032816 SNARE associated Golgi protein SDY_3282 c73ca6950ef645f2f22a23b5c138d8f4 220 PANTHER PTHR30353:SF11 1 216 2.4E-173 T 21-04-2016 SDY_3547 0f9837b704a37629c8f366296ac51406 256 Pfam PF00005 ABC transporter 18 166 2.0E-27 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_3547 0f9837b704a37629c8f366296ac51406 256 PANTHER PTHR24220:SF558 3 253 7.0E-90 T 21-04-2016 SDY_3547 0f9837b704a37629c8f366296ac51406 256 SMART SM00382 26 215 4.3E-14 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_3547 0f9837b704a37629c8f366296ac51406 256 PANTHER PTHR24220 3 253 7.0E-90 T 21-04-2016 SDY_3547 0f9837b704a37629c8f366296ac51406 256 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_3547 0f9837b704a37629c8f366296ac51406 256 SUPERFAMILY SSF52540 2 229 1.59E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3547 0f9837b704a37629c8f366296ac51406 256 Gene3D G3DSA:3.40.50.300 3 232 3.0E-62 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 SUPERFAMILY SSF52540 1 213 5.31E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 PANTHER PTHR21343 1 231 1.9E-169 T 21-04-2016 SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 PIRSF PIRSF006755 1 225 6.5E-64 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 PANTHER PTHR21343:SF12 1 231 1.9E-169 T 21-04-2016 SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 Gene3D G3DSA:3.40.50.300 2 212 2.5E-65 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 Pfam PF13500 AAA domain 4 207 6.2E-29 T 21-04-2016 SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 6.6E-41 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_1563 b6800b4734e5edc3b0b1f81f797cff0a 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 220 23.939 T 21-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SDY_2081 67518bce8b401163aa75976ff1acc558 97 SUPERFAMILY SSF101498 1 89 6.93E-13 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SDY_2081 67518bce8b401163aa75976ff1acc558 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.9E-20 T 21-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SDY_2081 67518bce8b401163aa75976ff1acc558 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 88 1.5E-9 T 21-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SDY_3120 7ad30a2f9c07ad0dff873afcdc2e3d07 188 PANTHER PTHR33219:SF5 1 186 4.6E-98 T 21-04-2016 SDY_3120 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 10 78 8.1E-22 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 SDY_3120 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 104 167 7.7E-16 T 21-04-2016 IPR003425 CCB3/YggT GO:0016020 SDY_3120 7ad30a2f9c07ad0dff873afcdc2e3d07 188 PANTHER PTHR33219 1 186 4.6E-98 T 21-04-2016 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 3.1E-18 T 21-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Gene3D G3DSA:1.10.8.210 150 212 4.0E-23 T 21-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 PANTHER PTHR21091:SF16 165 442 3.3E-84 T 21-04-2016 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Gene3D G3DSA:3.40.1010.10 215 331 8.5E-46 T 21-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Gene3D G3DSA:3.30.160.110 113 148 1.4E-19 T 21-04-2016 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 21-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Gene3D G3DSA:3.30.950.10 332 456 2.0E-47 T 21-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 7.0E-9 T 21-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 SUPERFAMILY SSF51735 2 112 4.44E-27 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3530 66160a3e81040f57191862419d2b6ee4 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 4.0E-91 T 21-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 1.7E-50 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 SUPERFAMILY SSF75615 114 207 1.96E-26 T 21-04-2016 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Gene3D G3DSA:3.40.50.720 2 112 1.1E-36 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.841 T 21-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 21-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 PIRSF PIRSF036426 1 457 3.2E-204 T 21-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 Pfam PF13241 Putative NAD(P)-binding 6 115 7.1E-26 T 21-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 PANTHER PTHR21091 165 442 3.3E-84 T 21-04-2016 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 1.6E-70 T 21-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SDY_3530 66160a3e81040f57191862419d2b6ee4 457 SUPERFAMILY SSF53790 215 456 4.32E-79 T 21-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SDY_4315 dea8f014b9a61194562e2e55922e1c05 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 7.4E-73 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SDY_4315 dea8f014b9a61194562e2e55922e1c05 265 PANTHER PTHR32502:SF4 1 265 4.7E-128 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SDY_4315 dea8f014b9a61194562e2e55922e1c05 265 PANTHER PTHR32502 1 265 4.7E-128 T 21-04-2016 SDY_4315 dea8f014b9a61194562e2e55922e1c05 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 264 6.8E-128 T 21-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 290 9.9E-45 T 21-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 SUPERFAMILY SSF51735 112 291 5.47E-45 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 PANTHER PTHR10996:SF114 1 323 4.6E-182 T 21-04-2016 SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 14 325 64.484 T 21-04-2016 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 21-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 Gene3D G3DSA:3.40.50.720 107 291 1.7E-50 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1004 41617f99e0cb15dc4402b2831b460a53 325 PANTHER PTHR10996 1 323 4.6E-182 T 21-04-2016 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 70 90 3.1E-9 T 21-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 35 49 3.1E-9 T 21-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 SUPERFAMILY SSF53335 17 190 1.5E-31 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_3439 b32fb7694665c305168cdb84d7e19637 202 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 39 45 - T 21-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 Pfam PF01555 DNA methylase 36 189 2.6E-23 T 21-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 PANTHER PTHR13370 7 194 3.2E-59 T 21-04-2016 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 PANTHER PTHR13370:SF8 7 194 3.2E-59 T 21-04-2016 SDY_3439 b32fb7694665c305168cdb84d7e19637 202 Gene3D G3DSA:3.40.50.150 16 189 1.4E-36 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 Gene3D G3DSA:3.30.1150.10 323 421 2.6E-45 T 21-04-2016 SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 TIGRFAM TIGR02794 tolA_full: protein TolA 12 245 7.6E-48 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 TIGRFAM TIGR02794 tolA_full: protein TolA 232 421 8.1E-45 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 Pfam PF06519 TolA C-terminal 326 419 3.9E-38 T 21-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 SUPERFAMILY SSF74653 334 421 8.24E-23 T 21-04-2016 SDY_0687 2a3c7f47d46f53f47c5a77334e41f516 421 PANTHER PTHR23242 2 309 1.1E-50 T 21-04-2016 SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 ProSitePatterns PS00768 Transthyretin signature 1. 32 47 - T 21-04-2016 IPR023418 Transthyretin, thyroxine binding site SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 Pfam PF00576 HIUase/Transthyretin family 29 103 5.2E-18 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 SUPERFAMILY SSF49472 25 105 6.15E-24 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 PRINTS PR00189 Transthyretin signature 28 48 1.3E-10 T 21-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 PRINTS PR00189 Transthyretin signature 60 85 1.3E-10 T 21-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 PRINTS PR00189 Transthyretin signature 86 108 1.3E-10 T 21-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 Gene3D G3DSA:2.60.40.180 25 103 2.8E-22 T 21-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily SDY_1038 0515a1780c2992de370ecf09bc3b0ede 108 PANTHER PTHR10395 28 102 1.6E-19 T 21-04-2016 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 PANTHER PTHR30443 4 577 0.0 T 21-04-2016 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 Pfam PF00884 Sulfatase 238 529 1.8E-46 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 SUPERFAMILY SSF53649 235 554 1.87E-31 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 Gene3D G3DSA:3.40.720.10 240 535 6.6E-14 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 Pfam PF08019 Domain of unknown function (DUF1705) 56 206 5.6E-5 T 21-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SDY_3790 8c687f79ee56f546f42671a5cd331733 577 PANTHER PTHR30443:SF2 4 577 0.0 T 21-04-2016 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 PIRSF PIRSF006060 1 462 8.3E-74 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 PANTHER PTHR11785:SF24 1 466 6.3E-286 T 21-04-2016 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 Pfam PF00324 Amino acid permease 18 456 2.1E-126 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 PANTHER PTHR11785 1 466 6.3E-286 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2853 12e11744d7c51f4d80c4bfade61154ae 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 5.7E-258 T 21-04-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PANTHER PTHR21087 1 172 4.2E-118 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PRINTS PR01100 Shikimate kinase family signature 74 83 1.4E-25 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PRINTS PR01100 Shikimate kinase family signature 29 42 1.4E-25 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PRINTS PR01100 Shikimate kinase family signature 57 65 1.4E-25 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PRINTS PR01100 Shikimate kinase family signature 5 20 1.4E-25 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PRINTS PR01100 Shikimate kinase family signature 95 112 1.4E-25 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 PANTHER PTHR21087:SF9 1 172 4.2E-118 T 21-04-2016 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 Gene3D G3DSA:3.40.50.300 3 169 7.1E-49 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 Pfam PF01202 Shikimate kinase 11 168 1.3E-47 T 21-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 21-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 SUPERFAMILY SSF52540 4 170 1.15E-27 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.095 T 21-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_0355 a112a61c55d3d7346ad298221704ccd8 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 42.986 T 21-04-2016 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01021 OMPA domain signature 274 290 3.3E-24 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01021 OMPA domain signature 259 274 3.3E-24 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01021 OMPA domain signature 227 249 3.3E-24 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PANTHER PTHR30128 1 350 4.9E-138 T 21-04-2016 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 SUPERFAMILY SSF56925 22 199 8.37E-46 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 Gene3D G3DSA:3.30.1330.60 216 338 2.9E-42 T 21-04-2016 IPR006665 OmpA-like domain SDY_0930 ca281f27195cb63d78692b8de2d54322 350 ProSitePatterns PS01068 OmpA-like domain. 261 305 - T 21-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 107 123 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 183 197 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 283 302 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 244 263 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 317 330 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 215 230 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PRINTS PR01022 Outer membrane protein A signature 169 183 2.7E-73 T 21-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 SUPERFAMILY SSF103088 215 338 1.44E-36 T 21-04-2016 IPR006665 OmpA-like domain SDY_0930 ca281f27195cb63d78692b8de2d54322 350 PANTHER PTHR30128:SF16 1 350 4.9E-138 T 21-04-2016 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 Pfam PF00691 OmpA family 226 321 1.1E-23 T 21-04-2016 IPR006665 OmpA-like domain SDY_0930 ca281f27195cb63d78692b8de2d54322 350 Gene3D G3DSA:2.40.160.20 11 215 1.3E-81 T 21-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SDY_0930 ca281f27195cb63d78692b8de2d54322 350 Pfam PF01389 OmpA-like transmembrane domain 23 199 5.8E-76 T 21-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 Gene3D G3DSA:3.40.50.2000 251 457 6.2E-70 T 21-04-2016 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 PANTHER PTHR12526 1 476 6.5E-157 T 21-04-2016 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 PANTHER PTHR12526:SF17 1 476 6.5E-157 T 21-04-2016 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 47.139 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 SUPERFAMILY SSF53756 5 476 8.03E-117 T 21-04-2016 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.5E-176 T 21-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 Pfam PF00534 Glycosyl transferases group 1 288 438 1.9E-12 T 21-04-2016 IPR001296 Glycosyl transferase, family 1 SDY_3575 62121c8f715cedd3d5e747566baa7776 477 Pfam PF08323 Starch synthase catalytic domain 2 233 1.3E-71 T 21-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 Gene3D G3DSA:3.40.50.1970 6 160 2.0E-32 T 21-04-2016 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 3.3E-45 T 21-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 PANTHER PTHR11496 1 362 1.0E-188 T 21-04-2016 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 Gene3D G3DSA:1.20.1090.10 162 359 7.8E-53 T 21-04-2016 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 21-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 PANTHER PTHR11496:SF55 1 362 1.0E-188 T 21-04-2016 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 SUPERFAMILY SSF56796 8 357 4.97E-58 T 21-04-2016 SDY_0531 2ea84a6acf5d6e335dcd859fc0e06056 362 PIRSF PIRSF000112 2 362 2.4E-129 T 21-04-2016 SDY_2745 053a7f20c2d5f8a7b2106cd23e3ee9e3 237 Pfam PF13942 YfhG lipoprotein 45 217 4.4E-76 T 21-04-2016 IPR025262 Quorum-sensing regulator protein G SDY_2745 053a7f20c2d5f8a7b2106cd23e3ee9e3 237 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 27 218 2.0E-93 T 21-04-2016 SDY_2075 010465113d0eacb426965b42083eb668 402 PANTHER PTHR30435 280 402 1.5E-102 T 21-04-2016 SDY_2075 010465113d0eacb426965b42083eb668 402 PANTHER PTHR30435 1 117 1.5E-102 T 21-04-2016 SDY_2075 010465113d0eacb426965b42083eb668 402 Pfam PF07559 Flagellar basal body protein FlaE 173 283 6.8E-21 T 21-04-2016 IPR011491 Flagellar hook protein FlgE SDY_2075 010465113d0eacb426965b42083eb668 402 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 324 401 2.5E-20 T 21-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SDY_2075 010465113d0eacb426965b42083eb668 402 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 21-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SDY_2075 010465113d0eacb426965b42083eb668 402 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 384 4.5E-96 T 21-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SDY_2075 010465113d0eacb426965b42083eb668 402 PANTHER PTHR30435:SF1 280 402 1.5E-102 T 21-04-2016 SDY_2075 010465113d0eacb426965b42083eb668 402 PANTHER PTHR30435:SF1 1 117 1.5E-102 T 21-04-2016 SDY_2075 010465113d0eacb426965b42083eb668 402 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 21-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SDY_2075 010465113d0eacb426965b42083eb668 402 SUPERFAMILY SSF117143 73 363 3.14E-83 T 21-04-2016 SDY_2044 7aa789c8c2012fa9fc2c8af1432dda68 274 Pfam PF01636 Phosphotransferase enzyme family 25 222 1.0E-13 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase SDY_2044 7aa789c8c2012fa9fc2c8af1432dda68 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 26 270 1.1E-101 T 21-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 SDY_2044 7aa789c8c2012fa9fc2c8af1432dda68 274 Hamap MF_01604 Thiamine kinase [thiK]. 1 274 70.476 T 21-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 SDY_2044 7aa789c8c2012fa9fc2c8af1432dda68 274 Gene3D G3DSA:3.90.1200.10 75 264 8.0E-13 T 21-04-2016 SDY_2044 7aa789c8c2012fa9fc2c8af1432dda68 274 SUPERFAMILY SSF56112 21 268 1.18E-28 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_1218 406f9bd2ef6bdda936ce08e795505567 131 Pfam PF03400 IS1 transposase 2 131 9.4E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1218 406f9bd2ef6bdda936ce08e795505567 131 PANTHER PTHR33293 6 126 4.7E-25 T 21-04-2016 SDY_1218 406f9bd2ef6bdda936ce08e795505567 131 PANTHER PTHR33293:SF1 6 126 4.7E-25 T 21-04-2016 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 PANTHER PTHR37532:SF1 1 66 3.4E-36 T 21-04-2016 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 9.9E-33 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 SUPERFAMILY SSF140319 3 64 3.79E-27 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 PIRSF PIRSF039003 3 66 3.2E-33 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 3.1E-32 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 Gene3D G3DSA:1.10.10.600 1 66 6.3E-35 T 21-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 SDY_2720 e4776e4a90b74421af46968294e1b9ec 66 PANTHER PTHR37532 1 66 3.4E-36 T 21-04-2016 SDY_1134 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Gene3D G3DSA:1.10.10.710 20 86 8.7E-27 T 21-04-2016 IPR009813 Uncharacterised protein family YebG SDY_1134 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Pfam PF07130 YebG protein 1 74 6.0E-34 T 21-04-2016 IPR009813 Uncharacterised protein family YebG SDY_PA02 16085bcc534eca62db23974b56ee480e 91 Gene3D G3DSA:3.40.50.720 1 56 6.0E-25 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_PA02 16085bcc534eca62db23974b56ee480e 91 Gene3D G3DSA:3.30.360.10 57 91 9.5E-15 T 21-04-2016 SDY_PA02 16085bcc534eca62db23974b56ee480e 91 SUPERFAMILY SSF55347 35 91 2.94E-17 T 21-04-2016 SDY_PA02 16085bcc534eca62db23974b56ee480e 91 Pfam PF00742 Homoserine dehydrogenase 35 91 1.2E-13 T 21-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SDY_PA02 16085bcc534eca62db23974b56ee480e 91 PANTHER PTHR21499:SF29 2 91 7.5E-20 T 21-04-2016 SDY_PA02 16085bcc534eca62db23974b56ee480e 91 PANTHER PTHR21499 2 91 7.5E-20 T 21-04-2016 SDY_1826 1735d534251f1bbfbc886074694c8096 309 SUPERFAMILY SSF56596 5 308 1.44E-127 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1826 1735d534251f1bbfbc886074694c8096 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 7.1E-137 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1826 1735d534251f1bbfbc886074694c8096 309 Gene3D G3DSA:3.50.14.10 7 217 3.3E-86 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1826 1735d534251f1bbfbc886074694c8096 309 Gene3D G3DSA:3.50.14.10 235 281 3.1E-14 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1826 1735d534251f1bbfbc886074694c8096 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 73.887 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1826 1735d534251f1bbfbc886074694c8096 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.6E-164 T 21-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 SDY_1710 b62bd05fe8fc065ee256a0b01b48a87a 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 189 2.7E-89 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_1710 b62bd05fe8fc065ee256a0b01b48a87a 193 PIRSF PIRSF004982 5 189 1.7E-58 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_1710 b62bd05fe8fc065ee256a0b01b48a87a 193 PANTHER PTHR37530 1 193 3.3E-71 T 21-04-2016 SDY_1710 b62bd05fe8fc065ee256a0b01b48a87a 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 167 5.2E-49 T 21-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SDY_1189 ecccec8ac57d1a52fd7e01a6167ab3dd 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.4E-112 T 21-04-2016 IPR022522 Flagellar motor stator, MotA SDY_1189 ecccec8ac57d1a52fd7e01a6167ab3dd 295 PANTHER PTHR30433:SF4 1 289 4.4E-188 T 21-04-2016 IPR022522 Flagellar motor stator, MotA SDY_1189 ecccec8ac57d1a52fd7e01a6167ab3dd 295 PANTHER PTHR30433 1 289 4.4E-188 T 21-04-2016 SDY_1189 ecccec8ac57d1a52fd7e01a6167ab3dd 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 21-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SDY_1189 ecccec8ac57d1a52fd7e01a6167ab3dd 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 9.1E-11 T 21-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SDY_3050 0b48a9e1f99ef82a0bed4c2f17b46097 72 PANTHER PTHR37011:SF1 1 72 3.2E-39 T 21-04-2016 SDY_3050 0b48a9e1f99ef82a0bed4c2f17b46097 72 SUPERFAMILY SSF50182 21 71 3.11E-18 T 21-04-2016 IPR010920 LSM domain SDY_3050 0b48a9e1f99ef82a0bed4c2f17b46097 72 Gene3D G3DSA:2.30.30.100 19 72 6.5E-31 T 21-04-2016 SDY_3050 0b48a9e1f99ef82a0bed4c2f17b46097 72 PANTHER PTHR37011 1 72 3.2E-39 T 21-04-2016 SDY_3050 0b48a9e1f99ef82a0bed4c2f17b46097 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 4.3E-24 T 21-04-2016 IPR010305 Protein of unknown function DUF903 SDY_0897 ec1739a235fd909957831793604f5df8 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 7.6E-42 T 21-04-2016 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 SDY_0897 ec1739a235fd909957831793604f5df8 396 Gene3D G3DSA:1.20.1250.20 12 193 6.3E-33 T 21-04-2016 SDY_0897 ec1739a235fd909957831793604f5df8 396 Gene3D G3DSA:1.20.1250.20 211 393 1.6E-10 T 21-04-2016 SDY_0897 ec1739a235fd909957831793604f5df8 396 SUPERFAMILY SSF103473 8 395 7.06E-69 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_0897 ec1739a235fd909957831793604f5df8 396 PANTHER PTHR23502:SF39 11 379 1.0E-212 T 21-04-2016 SDY_0897 ec1739a235fd909957831793604f5df8 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.6E-44 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_0897 ec1739a235fd909957831793604f5df8 396 PANTHER PTHR23502 11 379 1.0E-212 T 21-04-2016 SDY_0897 ec1739a235fd909957831793604f5df8 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 3.2E-161 T 21-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SDY_2672 39fcd131e2a3f072b0a541c53fb08b2f 322 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 208 221 - T 21-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SDY_2672 39fcd131e2a3f072b0a541c53fb08b2f 322 Pfam PF00146 NADH dehydrogenase 25 318 3.1E-52 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SDY_2672 39fcd131e2a3f072b0a541c53fb08b2f 322 PANTHER PTHR11432 1 322 4.7E-151 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SDY_2672 39fcd131e2a3f072b0a541c53fb08b2f 322 PANTHER PTHR11432:SF1 1 322 4.7E-151 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 21-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 Pfam PF01494 FAD binding domain 6 338 1.5E-27 T 21-04-2016 IPR002938 FAD-binding domain GO:0071949 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PANTHER PTHR13789 4 391 2.4E-257 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 SUPERFAMILY SSF51905 6 178 1.11E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 SUPERFAMILY SSF51905 267 383 1.11E-60 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 2.1E-132 T 21-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 Gene3D G3DSA:3.50.50.60 6 183 3.4E-46 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 Gene3D G3DSA:3.50.50.60 268 354 3.4E-46 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PANTHER PTHR13789:SF233 4 391 2.4E-257 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 6.2E-19 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 6.2E-19 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 6.2E-19 T 21-04-2016 SDY_0598 01474d1d0ee424039368c1c7b258803a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.2E-19 T 21-04-2016 SDY_0791 9e07ceca91814d23c2843cd74e8546ed 86 PANTHER PTHR34156:SF7 2 86 2.0E-66 T 21-04-2016 SDY_0791 9e07ceca91814d23c2843cd74e8546ed 86 Gene3D G3DSA:3.30.1660.10 19 86 5.2E-28 T 21-04-2016 IPR025543 Dodecin-like SDY_0791 9e07ceca91814d23c2843cd74e8546ed 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 2.6E-17 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_0791 9e07ceca91814d23c2843cd74e8546ed 86 SUPERFAMILY SSF159871 3 86 6.15E-23 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_0791 9e07ceca91814d23c2843cd74e8546ed 86 PANTHER PTHR34156 2 86 2.0E-66 T 21-04-2016 SDY_3287 1ce48eb95b3a92bbbdd27b2f7fdd1486 99 Pfam PF13997 YqjK-like protein 14 86 1.7E-27 T 21-04-2016 IPR025612 YqjK-like protein SDY_1271 e76d2cf421d530036f7632cf4ec6ba0d 117 PANTHER PTHR34874:SF2 2 117 1.2E-81 T 21-04-2016 SDY_1271 e76d2cf421d530036f7632cf4ec6ba0d 117 SUPERFAMILY SSF75169 1 117 1.57E-35 T 21-04-2016 IPR027396 DsrEFH-like SDY_1271 e76d2cf421d530036f7632cf4ec6ba0d 117 Gene3D G3DSA:3.40.1260.10 1 117 1.1E-45 T 21-04-2016 IPR027396 DsrEFH-like SDY_1271 e76d2cf421d530036f7632cf4ec6ba0d 117 Pfam PF02635 DsrE/DsrF-like family 2 117 1.8E-23 T 21-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SDY_1271 e76d2cf421d530036f7632cf4ec6ba0d 117 PANTHER PTHR34874 2 117 1.2E-81 T 21-04-2016 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 Gene3D G3DSA:1.10.1370.10 140 349 4.3E-146 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 Gene3D G3DSA:1.10.1370.10 505 678 4.3E-146 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 Gene3D G3DSA:1.20.1050.40 7 138 1.6E-23 T 21-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 PANTHER PTHR11804 3 678 0.0 T 21-04-2016 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 Pfam PF01432 Peptidase family M3 222 677 7.0E-176 T 21-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 PANTHER PTHR11804:SF8 3 678 0.0 T 21-04-2016 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 SUPERFAMILY SSF55486 1 677 1.34E-211 T 21-04-2016 SDY_3564 420a2d7b80a6ef12377799d28900f47e 680 Gene3D G3DSA:3.40.390.10 360 504 4.5E-61 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SDY_2170 ce10ca6ae04a19d5d0875fadf4205288 363 Pfam PF04434 SWIM zinc finger 167 191 0.039 T 21-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 SDY_2170 ce10ca6ae04a19d5d0875fadf4205288 363 Pfam PF04434 SWIM zinc finger 72 96 0.0049 T 21-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 SDY_2203 deea03a87469928d03c751fe20024e16 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 2.5E-207 T 21-04-2016 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|UniPathway: UPA00030|UniPathway: UPA00215 SDY_2203 deea03a87469928d03c751fe20024e16 297 PANTHER PTHR22572 5 284 2.9E-201 T 21-04-2016 SDY_2203 deea03a87469928d03c751fe20024e16 297 Gene3D G3DSA:3.90.550.10 4 276 6.2E-65 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2203 deea03a87469928d03c751fe20024e16 297 Pfam PF00483 Nucleotidyl transferase 5 274 2.2E-20 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SDY_2203 deea03a87469928d03c751fe20024e16 297 SUPERFAMILY SSF53448 2 283 4.51E-57 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2203 deea03a87469928d03c751fe20024e16 297 PANTHER PTHR22572:SF118 5 284 2.9E-201 T 21-04-2016 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 TIGRFAM TIGR01068 thioredoxin: thioredoxin 27 125 3.6E-39 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 PIRSF PIRSF000077 20 126 8.5E-45 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 Pfam PF00085 Thioredoxin 23 124 3.4E-34 T 21-04-2016 IPR013766 Thioredoxin domain GO:0045454 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 PANTHER PTHR10438 21 127 4.0E-40 T 21-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 SUPERFAMILY SSF52833 14 126 2.87E-42 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 21-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 PRINTS PR00421 Thioredoxin family signature 42 50 5.1E-10 T 21-04-2016 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 PRINTS PR00421 Thioredoxin family signature 90 101 5.1E-10 T 21-04-2016 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 PRINTS PR00421 Thioredoxin family signature 50 59 5.1E-10 T 21-04-2016 SDY_3968 0ee3427eef192979091eec6c5aa39eb1 127 Gene3D G3DSA:3.40.30.10 19 126 5.1E-43 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2134 a4ec9bc6da5207f821e754ee38cdb449 125 Pfam PF03400 IS1 transposase 1 125 6.2E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2134 a4ec9bc6da5207f821e754ee38cdb449 125 PANTHER PTHR33293 1 124 1.9E-42 T 21-04-2016 SDY_0465 a4ec9bc6da5207f821e754ee38cdb449 125 Pfam PF03400 IS1 transposase 1 125 6.2E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0465 a4ec9bc6da5207f821e754ee38cdb449 125 PANTHER PTHR33293 1 124 1.9E-42 T 21-04-2016 SDY_2862 4fc2f1ff13630c69a0776f8e4d882d6d 121 SUPERFAMILY SSF159894 1 109 3.4E-58 T 21-04-2016 SDY_2862 4fc2f1ff13630c69a0776f8e4d882d6d 121 Pfam PF09400 Protein of unknown function (DUF2002) 1 109 2.0E-60 T 21-04-2016 IPR018994 Protein of unknown function DUF2002 SDY_2095 5af841e045682f26b4c0ce5b97d1f90f 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 8.0E-45 T 21-04-2016 IPR025730 Biofilm regulator BssS SDY_2095 5af841e045682f26b4c0ce5b97d1f90f 84 Pfam PF13991 BssS protein family 11 80 2.1E-32 T 21-04-2016 IPR025730 Biofilm regulator BssS SDY_0059 133d3102efaead1a38c10c002f68f616 522 Gene3D G3DSA:3.40.50.980 14 188 3.5E-39 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 21-04-2016 IPR020845 AMP-binding, conserved site SDY_0059 133d3102efaead1a38c10c002f68f616 522 PANTHER PTHR24096 1 522 0.0 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 Gene3D G3DSA:3.40.50.980 189 347 2.0E-33 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 SUPERFAMILY SSF56801 14 522 1.7E-133 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 PANTHER PTHR24096:SF182 1 522 0.0 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 Gene3D G3DSA:2.30.38.10 348 422 1.7E-23 T 21-04-2016 SDY_0059 133d3102efaead1a38c10c002f68f616 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 515 9.4E-15 T 21-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SDY_0059 133d3102efaead1a38c10c002f68f616 522 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 6 522 85.638 T 21-04-2016 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 UniPathway: UPA00117 SDY_0059 133d3102efaead1a38c10c002f68f616 522 Pfam PF00501 AMP-binding enzyme 22 431 3.6E-89 T 21-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SDY_0059 133d3102efaead1a38c10c002f68f616 522 Gene3D G3DSA:3.30.300.30 428 522 8.6E-27 T 21-04-2016 SDY_2211 06bc6e01f386d1527eec6987fa24c27d 303 SUPERFAMILY SSF53448 4 276 1.31E-32 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2211 06bc6e01f386d1527eec6987fa24c27d 303 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 11 293 1.1E-125 T 21-04-2016 IPR006446 Rhamnosyltransferase KEGG: 00540+2.4.-.-|UniPathway: UPA00030 SDY_2211 06bc6e01f386d1527eec6987fa24c27d 303 PANTHER PTHR22916 5 299 1.9E-15 T 21-04-2016 SDY_2211 06bc6e01f386d1527eec6987fa24c27d 303 Gene3D G3DSA:3.90.550.10 3 207 3.1E-20 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2211 06bc6e01f386d1527eec6987fa24c27d 303 Pfam PF00535 Glycosyl transferase family 2 8 168 4.0E-14 T 21-04-2016 IPR001173 Glycosyltransferase 2-like SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 SUPERFAMILY SSF52540 6 224 1.75E-48 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 Pfam PF02224 Cytidylate kinase 8 221 4.5E-85 T 21-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.0E-97 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 Gene3D G3DSA:3.40.50.300 6 221 2.6E-77 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.504 T 21-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SDY_2348 7965700b85ccdc8abf0e08a9a0b0b926 227 PANTHER PTHR21299 6 226 7.7E-86 T 21-04-2016 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Gene3D G3DSA:3.40.50.2300 25 147 1.4E-44 T 21-04-2016 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 SUPERFAMILY SSF53822 26 325 1.26E-70 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 PIRSF PIRSF002816 1 326 8.2E-151 T 21-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 PANTHER PTHR30036 1 329 1.1E-139 T 21-04-2016 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Gene3D G3DSA:3.40.50.2300 148 297 6.4E-56 T 21-04-2016 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 PANTHER PTHR30036:SF1 1 329 1.1E-139 T 21-04-2016 SDY_1120 1b1ccf63e210d9c39e9a17f20ca0bf0b 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 2.2E-96 T 21-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 SUPERFAMILY SSF111369 195 268 1.96E-7 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 SUPERFAMILY SSF111369 57 107 2.09E-7 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 PANTHER PTHR30386:SF6 1 376 4.9E-209 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 SUPERFAMILY SSF111369 136 178 2.09E-7 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.1E-13 T 21-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 3.5E-147 T 21-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 345 3.9E-18 T 21-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 PANTHER PTHR30386 1 376 4.9E-209 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 Gene3D G3DSA:2.40.50.100 215 248 1.3E-17 T 21-04-2016 SDY_2880 378979eb39a72c418b2200c0ea033c0e 390 Gene3D G3DSA:2.40.50.100 60 94 1.3E-17 T 21-04-2016 SDY_1751 cf151788ae01c99a7db69edeb0cbd756 179 PANTHER PTHR13256 7 179 3.8E-45 T 21-04-2016 SDY_1751 cf151788ae01c99a7db69edeb0cbd756 179 PANTHER PTHR13256:SF22 7 179 3.8E-45 T 21-04-2016 SDY_1751 cf151788ae01c99a7db69edeb0cbd756 179 SUPERFAMILY SSF55729 7 175 2.71E-40 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1751 cf151788ae01c99a7db69edeb0cbd756 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 1.5E-19 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_1751 cf151788ae01c99a7db69edeb0cbd756 179 Gene3D G3DSA:3.40.630.30 6 175 3.7E-42 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 PANTHER PTHR30191 9 760 0.0 T 21-04-2016 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 2.0E-207 T 21-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 SUPERFAMILY SSF51998 4 759 5.49E-295 T 21-04-2016 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 21-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 PIRSF PIRSF000379 8 760 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 Pfam PF01228 Glycine radical 630 741 4.3E-43 T 21-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 Gene3D G3DSA:3.20.70.20 5 760 0.0 T 21-04-2016 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 PANTHER PTHR30191:SF7 9 760 0.0 T 21-04-2016 SDY_2358 8b8bc660e64e134eb680ecccc84a6718 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 21-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SDY_0246 a7869f99523d44bd2e624d4f2369aa71 157 PIRSF PIRSF009103 1 154 1.8E-57 T 21-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SDY_0246 a7869f99523d44bd2e624d4f2369aa71 157 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 39 152 1.2E-34 T 21-04-2016 SDY_0246 a7869f99523d44bd2e624d4f2369aa71 157 SUPERFAMILY SSF89872 31 156 1.16E-49 T 21-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SDY_0246 a7869f99523d44bd2e624d4f2369aa71 157 Gene3D G3DSA:3.40.1420.10 29 157 3.3E-57 T 21-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 Gene3D G3DSA:3.40.190.10 180 260 2.2E-20 T 21-04-2016 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 SUPERFAMILY SSF46785 11 112 1.55E-13 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 Pfam PF03466 LysR substrate binding domain 90 293 1.1E-40 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 Gene3D G3DSA:1.10.10.10 2 81 1.3E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 PANTHER PTHR30126:SF6 1 309 1.3E-178 T 21-04-2016 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 Gene3D G3DSA:3.40.190.10 92 179 2.6E-21 T 21-04-2016 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 PANTHER PTHR30126 1 309 1.3E-178 T 21-04-2016 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 SUPERFAMILY SSF53850 88 294 1.75E-41 T 21-04-2016 SDY_2246 29b7b6acff11c7c5563e52c071b72a67 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-12 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_2227 d3a239b4e1561bbd12657e70d62b4358 249 PANTHER PTHR30574:SF1 8 242 5.5E-35 T 21-04-2016 SDY_2227 d3a239b4e1561bbd12657e70d62b4358 249 PANTHER PTHR30574 8 242 5.5E-35 T 21-04-2016 SDY_2227 d3a239b4e1561bbd12657e70d62b4358 249 Pfam PF04143 Sulphur transport 6 228 1.0E-63 T 21-04-2016 IPR007272 Sulphur transport domain SDY_4723 a9867850eabe19eebe206431890e5c05 75 Pfam PF03811 InsA N-terminal domain 3 20 7.4E-7 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4723 a9867850eabe19eebe206431890e5c05 75 Pfam PF12759 InsA C-terminal domain 27 72 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1622a a9867850eabe19eebe206431890e5c05 75 Pfam PF03811 InsA N-terminal domain 3 20 7.4E-7 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1622a a9867850eabe19eebe206431890e5c05 75 Pfam PF12759 InsA C-terminal domain 27 72 1.9E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 Gene3D G3DSA:3.40.50.10740 5 160 4.0E-40 T 21-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 SUPERFAMILY SSF52317 5 160 5.49E-33 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 Gene3D G3DSA:3.50.30.60 167 291 1.7E-43 T 21-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 SUPERFAMILY SSF141986 139 288 4.71E-43 T 21-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 Pfam PF02016 LD-carboxypeptidase 6 284 3.6E-65 T 21-04-2016 IPR003507 Peptidase family S66 SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 PANTHER PTHR30237 4 303 7.8E-126 T 21-04-2016 SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 PANTHER PTHR30237:SF2 4 303 7.8E-126 T 21-04-2016 SDY_1232 b9e1fdaabb08785d3772cba60cb25c82 304 PIRSF PIRSF028757 1 300 3.9E-90 T 21-04-2016 IPR003507 Peptidase family S66 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 20.087 T 21-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 1.4E-45 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Pfam PF08335 GlnD PII-uridylyltransferase 825 916 7.8E-12 T 21-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 SUPERFAMILY SSF81301 9 286 3.01E-91 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Gene3D G3DSA:3.30.460.10 113 285 4.6E-62 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Gene3D G3DSA:3.30.460.10 639 810 8.2E-63 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 3.2E-102 T 21-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 32 276 1.2E-98 T 21-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 PANTHER PTHR30621 1 942 0.0 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 SUPERFAMILY SSF81593 287 436 6.12E-46 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 SUPERFAMILY SSF81593 818 943 2.51E-33 T 21-04-2016 SDY_3236 fd2ad46f8521e32dfbb62e1a82f2ae71 946 SUPERFAMILY SSF81301 525 815 1.54E-89 T 21-04-2016 SDY_2208 87079b2845c4c21ba4a8a7f6c0f30d27 396 Pfam PF01943 Polysaccharide biosynthesis protein 2 269 1.8E-66 T 21-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SDY_2208 87079b2845c4c21ba4a8a7f6c0f30d27 396 PRINTS PR00173 Glutamate-aspartate symporter signature 354 373 2.1E-7 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_2208 87079b2845c4c21ba4a8a7f6c0f30d27 396 PRINTS PR00173 Glutamate-aspartate symporter signature 131 156 2.1E-7 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_2208 87079b2845c4c21ba4a8a7f6c0f30d27 396 PRINTS PR00173 Glutamate-aspartate symporter signature 103 123 2.1E-7 T 21-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SDY_4535 77135572742e914c4dbf94c1c9a645a1 165 PANTHER PTHR38683 1 165 2.6E-69 T 21-04-2016 SDY_4535 77135572742e914c4dbf94c1c9a645a1 165 Pfam PF04345 Chorismate lyase 18 165 8.1E-31 T 21-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SDY_4535 77135572742e914c4dbf94c1c9a645a1 165 SUPERFAMILY SSF64288 6 165 1.21E-46 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4535 77135572742e914c4dbf94c1c9a645a1 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.742 T 21-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 SDY_4535 77135572742e914c4dbf94c1c9a645a1 165 Gene3D G3DSA:3.40.1410.10 3 165 5.2E-58 T 21-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 PANTHER PTHR23502:SF57 1 375 5.1E-250 T 21-04-2016 SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 SUPERFAMILY SSF103473 3 385 6.8E-56 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 Gene3D G3DSA:1.20.1250.20 211 385 6.4E-9 T 21-04-2016 SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 Gene3D G3DSA:1.20.1250.20 5 185 4.8E-34 T 21-04-2016 SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 Pfam PF07690 Major Facilitator Superfamily 10 342 7.3E-44 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 391 37.661 T 21-04-2016 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 SDY_4203 8bdb27e4ee22b44116b1776f613de8e7 391 PANTHER PTHR23502 1 375 5.1E-250 T 21-04-2016 SDY_0051 fd663c367297cadbd81e4c8b4dbfb5a7 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.131 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SDY_0051 fd663c367297cadbd81e4c8b4dbfb5a7 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 2.4E-100 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SDY_0051 fd663c367297cadbd81e4c8b4dbfb5a7 316 PANTHER PTHR30426 1 316 8.2E-164 T 21-04-2016 SDY_0051 fd663c367297cadbd81e4c8b4dbfb5a7 316 Pfam PF02401 LytB protein 3 282 1.5E-92 T 21-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PIRSF PIRSF002764 1 220 6.1E-84 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 1.4E-95 T 21-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PANTHER PTHR30070 1 220 1.0E-76 T 21-04-2016 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 Pfam PF03379 CcmB protein 3 217 4.8E-92 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 3.0E-72 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0878 a5cdfba447e7093ce9dc19120de5ade9 220 PANTHER PTHR30070:SF1 1 220 1.0E-76 T 21-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_1729 9e97615d3b36973dd8d1c14cc4ebc102 57 Pfam PF10753 Protein of unknown function (DUF2566) 4 57 9.5E-28 T 21-04-2016 IPR019689 Toxin GhoT/OrtT SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 PANTHER PTHR24220:SF284 1 335 3.1E-122 T 21-04-2016 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 SUPERFAMILY SSF50331 234 350 6.17E-21 T 21-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 SMART SM00382 23 206 4.8E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 1.4E-165 T 21-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 PANTHER PTHR24220 1 335 3.1E-122 T 21-04-2016 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 Gene3D G3DSA:3.40.50.300 17 218 2.6E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 Pfam PF00005 ABC transporter 17 156 2.0E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 Gene3D G3DSA:2.40.50.100 277 348 9.7E-22 T 21-04-2016 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 3.1E-23 T 21-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 SUPERFAMILY SSF52540 7 219 1.38E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 Pfam PF03459 TOBE domain 290 350 1.4E-16 T 21-04-2016 IPR005116 Transport-associated OB, type 1 SDY_0712 64f2a1d11b4ec3e5b2ef2af8923726ef 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4126 96c8449e43864eaebda431a67f5219be 251 Gene3D G3DSA:3.40.630.30 113 159 8.0E-5 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_4126 96c8449e43864eaebda431a67f5219be 251 SUPERFAMILY SSF55729 77 157 5.97E-5 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1894 e6d29e93ab0a5bcdd554f6a69b5213e8 237 PANTHER PTHR32552 2 235 2.3E-48 T 21-04-2016 SDY_1894 e6d29e93ab0a5bcdd554f6a69b5213e8 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_1894 e6d29e93ab0a5bcdd554f6a69b5213e8 237 SUPERFAMILY SSF53098 65 229 7.97E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1894 e6d29e93ab0a5bcdd554f6a69b5213e8 237 Pfam PF00665 Integrase core domain 88 186 5.3E-19 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1894 e6d29e93ab0a5bcdd554f6a69b5213e8 237 Gene3D G3DSA:3.30.420.10 66 226 7.0E-25 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 SMART SM00481 10 77 1.9E-18 T 21-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 PANTHER PTHR30007:SF4 8 292 1.2E-112 T 21-04-2016 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 Pfam PF02811 PHP domain 11 115 1.2E-6 T 21-04-2016 IPR004013 PHP domain GO:0003824 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 Gene3D G3DSA:3.20.20.140 10 95 2.0E-41 T 21-04-2016 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 Gene3D G3DSA:3.20.20.140 164 268 2.0E-41 T 21-04-2016 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 SUPERFAMILY SSF89550 172 286 3.53E-52 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 SUPERFAMILY SSF89550 9 90 3.53E-52 T 21-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SDY_1334 8742f33cf6765c1c1e5d50b51242f53f 293 PANTHER PTHR30007 8 292 1.2E-112 T 21-04-2016 SDY_4286 83023cda205228c09e9e68fc4b389acd 361 PANTHER PTHR33529 2 361 6.3E-178 T 21-04-2016 SDY_4286 83023cda205228c09e9e68fc4b389acd 361 PANTHER PTHR33529:SF1 2 361 6.3E-178 T 21-04-2016 SDY_4286 83023cda205228c09e9e68fc4b389acd 361 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 359 1.3E-136 T 21-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 SDY_4286 83023cda205228c09e9e68fc4b389acd 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 359 7.8E-72 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SDY_4602 dabcf8d90de734a57dde5a22ebf8af09 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 54 1.2E-13 T 21-04-2016 IPR009506 Protein of unknown function DUF1127 SDY_0790 5711344125227a312d57694b947e81d7 335 Gene3D G3DSA:3.40.50.150 116 299 4.6E-9 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0790 5711344125227a312d57694b947e81d7 335 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 32 325 53.168 T 21-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 SDY_0790 5711344125227a312d57694b947e81d7 335 PIRSF PIRSF029038 22 335 9.8E-148 T 21-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 SDY_0790 5711344125227a312d57694b947e81d7 335 PANTHER PTHR13393:SF0 19 327 2.9E-131 T 21-04-2016 SDY_0790 5711344125227a312d57694b947e81d7 335 SUPERFAMILY SSF53335 70 323 9.67E-28 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_0790 5711344125227a312d57694b947e81d7 335 PANTHER PTHR13393 19 327 2.9E-131 T 21-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 SDY_0790 5711344125227a312d57694b947e81d7 335 Pfam PF05971 Protein of unknown function (DUF890) 30 323 2.2E-152 T 21-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 3.4E-64 T 21-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 Pfam PF01479 S4 domain 4 43 2.3E-11 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 PANTHER PTHR21600:SF2 1 285 7.4E-105 T 21-04-2016 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 PANTHER PTHR21600 1 285 7.4E-105 T 21-04-2016 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 SUPERFAMILY SSF55174 5 98 3.68E-13 T 21-04-2016 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 Gene3D G3DSA:3.10.290.10 3 62 1.1E-14 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.6E-15 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 SMART SM00363 3 74 5.1E-10 T 21-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 SUPERFAMILY SSF55120 69 234 9.87E-43 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_1339 140498a9870c6b7cfe139a1f75570116 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 21-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SDY_4309 52bc1812478120f326f1cea9fd7db25e 90 Pfam PF11656 YjbD family (DUF3811) 3 90 1.5E-38 T 21-04-2016 IPR020317 Uncharacterised protein family YjbD SDY_4309 52bc1812478120f326f1cea9fd7db25e 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 3.0E-33 T 21-04-2016 IPR020317 Uncharacterised protein family YjbD SDY_1436 863660494125030287107a104c8d5e11 273 SUPERFAMILY SSF57938 169 220 2.62E-8 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_1436 863660494125030287107a104c8d5e11 273 Gene3D G3DSA:2.10.230.10 183 218 7.6E-5 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_1436 863660494125030287107a104c8d5e11 273 Pfam PF03589 Antitermination protein 24 111 1.1E-19 T 21-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 SDY_1436 863660494125030287107a104c8d5e11 273 Pfam PF03589 Antitermination protein 178 265 8.3E-30 T 21-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 SDY_1436 863660494125030287107a104c8d5e11 273 Gene3D G3DSA:2.10.230.10 163 182 2.8E-7 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_1436 863660494125030287107a104c8d5e11 273 Gene3D G3DSA:2.10.230.10 110 130 2.8E-7 T 21-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SDY_0432 767b758dc21b4c9970f72cdf8a459dcf 430 PANTHER PTHR11785 3 428 8.2E-74 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0432 767b758dc21b4c9970f72cdf8a459dcf 430 Pfam PF13520 Amino acid permease 13 397 1.3E-29 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0432 767b758dc21b4c9970f72cdf8a459dcf 430 PIRSF PIRSF006060 1 429 3.4E-49 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_0432 767b758dc21b4c9970f72cdf8a459dcf 430 PANTHER PTHR11785:SF342 3 428 8.2E-74 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 4.8E-88 T 21-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 SUPERFAMILY SSF53850 28 255 5.43E-70 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 PANTHER PTHR30632:SF0 5 254 4.5E-80 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 Gene3D G3DSA:3.40.190.10 28 109 5.0E-17 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 Gene3D G3DSA:3.40.190.10 219 255 5.0E-17 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 PIRSF PIRSF004846 1 257 1.1E-84 T 21-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 6.3E-51 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 Gene3D G3DSA:3.40.190.10 110 218 5.4E-45 T 21-04-2016 SDY_0710 492c604fbedbfc4fcdc80a1b066c06e7 257 PANTHER PTHR30632 5 254 4.5E-80 T 21-04-2016 SDY_4393 05428a90f846224949ad3d4428324812 177 PIRSF PIRSF036893 1 177 3.4E-52 T 21-04-2016 IPR022271 Lipocalin, ApoD type SDY_4393 05428a90f846224949ad3d4428324812 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 21-04-2016 IPR022272 Lipocalin family conserved site SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 7.2E-51 T 21-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 SDY_4393 05428a90f846224949ad3d4428324812 177 Gene3D G3DSA:2.40.128.20 2 175 3.9E-61 T 21-04-2016 IPR012674 Calycin SDY_4393 05428a90f846224949ad3d4428324812 177 PANTHER PTHR10612 1 176 3.3E-56 T 21-04-2016 SDY_4393 05428a90f846224949ad3d4428324812 177 SUPERFAMILY SSF50814 15 176 9.35E-50 T 21-04-2016 IPR011038 Calycin-like SDY_4393 05428a90f846224949ad3d4428324812 177 Pfam PF08212 Lipocalin-like domain 34 174 1.2E-50 T 21-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SDY_2952 d9dc88339147dc5104a2ba4edd1728c3 345 Pfam PF04389 Peptidase family M28 100 330 9.0E-35 T 21-04-2016 IPR007484 Peptidase M28 SDY_2952 d9dc88339147dc5104a2ba4edd1728c3 345 PANTHER PTHR12147 21 282 2.7E-50 T 21-04-2016 SDY_2952 d9dc88339147dc5104a2ba4edd1728c3 345 PANTHER PTHR12147 301 345 2.7E-50 T 21-04-2016 SDY_2952 d9dc88339147dc5104a2ba4edd1728c3 345 SUPERFAMILY SSF53187 42 316 1.05E-36 T 21-04-2016 SDY_2952 d9dc88339147dc5104a2ba4edd1728c3 345 Gene3D G3DSA:3.40.630.10 37 344 8.4E-47 T 21-04-2016 SDY_3606 4828618a3400b400b60df4d56f9b2177 282 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 271 5.2E-64 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_3606 4828618a3400b400b60df4d56f9b2177 282 PANTHER PTHR11795 7 282 4.4E-122 T 21-04-2016 SDY_3606 4828618a3400b400b60df4d56f9b2177 282 PANTHER PTHR11795:SF371 7 282 4.4E-122 T 21-04-2016 SDY_2146 9914683e208484219931ecec21a94454 132 PANTHER PTHR33931:SF2 1 132 5.5E-55 T 21-04-2016 SDY_2146 9914683e208484219931ecec21a94454 132 PANTHER PTHR33931 1 132 5.5E-55 T 21-04-2016 SDY_2146 9914683e208484219931ecec21a94454 132 Pfam PF03788 LrgA family 23 113 2.0E-28 T 21-04-2016 IPR005538 LrgA/CidA family GO:0016021 SDY_2146 9914683e208484219931ecec21a94454 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.735 T 21-04-2016 IPR022957 Uncharacterised protein family UPF0299 SDY_1799 2aa1c4c849cfdcc5e424b888b95747ca 63 Gene3D G3DSA:2.10.70.10 23 63 1.6E-18 T 21-04-2016 SDY_1799 2aa1c4c849cfdcc5e424b888b95747ca 63 Pfam PF10636 Hemin uptake protein hemP 27 63 5.3E-15 T 21-04-2016 IPR019600 Hemin uptake protein HemP SDY_3298 9c23580f43d163e90b4dc32284978d87 233 PANTHER PTHR13903:SF14 1 233 4.5E-176 T 21-04-2016 SDY_3298 9c23580f43d163e90b4dc32284978d87 233 Pfam PF02678 Pirin 4 119 4.6E-23 T 21-04-2016 IPR003829 Pirin, N-terminal domain SDY_3298 9c23580f43d163e90b4dc32284978d87 233 PIRSF PIRSF006232 1 230 1.5E-32 T 21-04-2016 IPR012093 Pirin SDY_3298 9c23580f43d163e90b4dc32284978d87 233 SUPERFAMILY SSF51182 1 231 4.13E-45 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_3298 9c23580f43d163e90b4dc32284978d87 233 PANTHER PTHR13903 1 233 4.5E-176 T 21-04-2016 IPR012093 Pirin SDY_3298 9c23580f43d163e90b4dc32284978d87 233 Gene3D G3DSA:2.60.120.10 3 231 3.9E-31 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 SUPERFAMILY SSF56931 39 288 3.01E-92 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.1E-87 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 Gene3D G3DSA:2.40.230.10 37 288 1.0E-101 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 PANTHER PTHR40457 1 289 2.0E-175 T 21-04-2016 SDY_3922 3fe41c180d748b8b1949d7213bbc728e 289 Pfam PF02253 Phospholipase A1 43 285 2.2E-89 T 21-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SDY_0953 6b378495a803c9e7c8c7627853e4f6c1 514 PANTHER PTHR30365 376 514 0.0 T 21-04-2016 SDY_0953 6b378495a803c9e7c8c7627853e4f6c1 514 PANTHER PTHR30365 1 310 0.0 T 21-04-2016 SDY_0953 6b378495a803c9e7c8c7627853e4f6c1 514 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.3E-176 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SDY_0953 6b378495a803c9e7c8c7627853e4f6c1 514 PANTHER PTHR30365:SF7 376 514 0.0 T 21-04-2016 SDY_0953 6b378495a803c9e7c8c7627853e4f6c1 514 PANTHER PTHR30365:SF7 1 310 0.0 T 21-04-2016 SDY_1399 7580086dac76cdd77863c03019be304d 465 PIRSF PIRSF019381 1 465 6.9E-215 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein SDY_1399 7580086dac76cdd77863c03019be304d 465 Pfam PF04317 YcjX-like family, DUF463 20 464 2.3E-183 T 21-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein SDY_1399 7580086dac76cdd77863c03019be304d 465 PANTHER PTHR38605 1 465 5.2E-262 T 21-04-2016 SDY_1399 7580086dac76cdd77863c03019be304d 465 PANTHER PTHR38605:SF1 1 465 5.2E-262 T 21-04-2016 SDY_1949 3abf657b45ec2bae756be0e53bd1e3e8 131 PANTHER PTHR33293 6 126 6.5E-24 T 21-04-2016 SDY_1949 3abf657b45ec2bae756be0e53bd1e3e8 131 PANTHER PTHR33293:SF1 6 126 6.5E-24 T 21-04-2016 SDY_1949 3abf657b45ec2bae756be0e53bd1e3e8 131 Pfam PF03400 IS1 transposase 2 131 2.0E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1956 3abf657b45ec2bae756be0e53bd1e3e8 131 PANTHER PTHR33293 6 126 6.5E-24 T 21-04-2016 SDY_1956 3abf657b45ec2bae756be0e53bd1e3e8 131 PANTHER PTHR33293:SF1 6 126 6.5E-24 T 21-04-2016 SDY_1956 3abf657b45ec2bae756be0e53bd1e3e8 131 Pfam PF03400 IS1 transposase 2 131 2.0E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0826 b0a3349c0c92e690ca052236865637e5 302 SUPERFAMILY SSF142338 11 295 8.24E-87 T 21-04-2016 SDY_0826 b0a3349c0c92e690ca052236865637e5 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 7.2E-79 T 21-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SDY_0826 b0a3349c0c92e690ca052236865637e5 302 Gene3D G3DSA:3.40.50.10680 82 299 2.9E-54 T 21-04-2016 SDY_0826 b0a3349c0c92e690ca052236865637e5 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.601 T 21-04-2016 IPR010119 Gluconeogenesis factor SDY_0826 b0a3349c0c92e690ca052236865637e5 302 PANTHER PTHR30135 1 302 5.9E-120 T 21-04-2016 SDY_0826 b0a3349c0c92e690ca052236865637e5 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 296 2.9E-105 T 21-04-2016 IPR010119 Gluconeogenesis factor SDY_0974a 1e47542d1aaedd9749daa331eb16d8db 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0974a 1e47542d1aaedd9749daa331eb16d8db 90 PANTHER PTHR33293:SF2 1 89 2.0E-20 T 21-04-2016 SDY_0974a 1e47542d1aaedd9749daa331eb16d8db 90 PANTHER PTHR33293 1 89 2.0E-20 T 21-04-2016 SDY_0974a 1e47542d1aaedd9749daa331eb16d8db 90 Pfam PF12759 InsA C-terminal domain 42 87 2.5E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 SMART SM00935 10 161 2.4E-39 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 PANTHER PTHR35089 2 160 8.9E-57 T 21-04-2016 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 11 57 2.1E-35 T 21-04-2016 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 92 161 2.1E-35 T 21-04-2016 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 PANTHER PTHR35089:SF1 2 160 8.9E-57 T 21-04-2016 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 Pfam PF03938 Outer membrane protein (OmpH-like) 9 159 1.5E-29 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SDY_0194 00a782218a942c1a99d326d5dc7f41eb 161 PIRSF PIRSF002094 1 161 1.0E-51 T 21-04-2016 IPR005632 Chaperone protein Skp GO:0051082 SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.0E-81 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 Gene3D G3DSA:1.10.132.20 67 184 2.9E-44 T 21-04-2016 IPR023584 Ribosome recycling factor domain SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 Pfam PF01765 Ribosome recycling factor 20 183 6.8E-63 T 21-04-2016 IPR023584 Ribosome recycling factor domain SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 SUPERFAMILY SSF55194 2 184 2.09E-71 T 21-04-2016 IPR023584 Ribosome recycling factor domain SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 PANTHER PTHR20982 1 185 5.2E-83 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SDY_0188 75b8e7871c67938515ee3f14a5c26b15 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.437 T 21-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 1.5E-93 T 21-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 2.0E-118 T 21-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 PANTHER PTHR36510:SF1 1 372 1.7E-192 T 21-04-2016 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 92.271 T 21-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 SUPERFAMILY SSF55931 4 369 2.03E-108 T 21-04-2016 SDY_0494 6da8a7db7a192b9f04932562ed127af8 372 PANTHER PTHR36510 1 372 1.7E-192 T 21-04-2016 SDY_4402 ffd152d0f3338413f2c0f0a7a1b98047 212 Pfam PF06693 Protein of unknown function (DUF1190) 67 211 1.9E-20 T 21-04-2016 IPR009576 Biofilm formation YgiB SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 PANTHER PTHR10060 4 260 3.3E-89 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 SUPERFAMILY SSF51556 5 258 2.05E-77 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 Pfam PF01026 TatD related DNase 6 257 3.5E-67 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 PIRSF PIRSF005902 2 260 8.2E-74 T 21-04-2016 IPR001130 TatD family GO:0016788 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 Gene3D G3DSA:3.20.20.140 3 258 7.3E-79 T 21-04-2016 SDY_4638 711e917d8c220bb4ee511ed860a40a43 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 21-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SDY_0269 a43a18018dc157f06c41ef4f8bd642ff 419 Gene3D G3DSA:1.10.10.660 39 99 4.0E-36 T 21-04-2016 IPR024033 Uncharacterised domain, YlbE SDY_0269 a43a18018dc157f06c41ef4f8bd642ff 419 Gene3D G3DSA:3.90.1700.10 250 416 3.7E-80 T 21-04-2016 SDY_0269 a43a18018dc157f06c41ef4f8bd642ff 419 Gene3D G3DSA:3.90.1710.10 100 248 2.9E-76 T 21-04-2016 SDY_0269 a43a18018dc157f06c41ef4f8bd642ff 419 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 1.5E-99 T 21-04-2016 IPR009499 Protein of unknown function DUF1116 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 SUPERFAMILY SSF56059 497 614 3.04E-77 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 SUPERFAMILY SSF56059 205 379 3.04E-77 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 SUPERFAMILY SSF54001 10 197 2.65E-61 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 SUPERFAMILY SSF52440 380 510 2.65E-39 T 21-04-2016 IPR016185 Pre-ATP-grasp domain SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 PANTHER PTHR30094:SF4 1 160 0.0 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 PANTHER PTHR30094:SF4 250 619 0.0 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 Pfam PF05257 CHAP domain 52 149 1.2E-11 T 21-04-2016 IPR007921 CHAP domain SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 PANTHER PTHR30094 1 160 0.0 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 PANTHER PTHR30094 250 619 0.0 T 21-04-2016 SDY_3085 1bec76be687a06418a3a114017a4ad6f 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 1.1E-66 T 21-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SDY_3955 bb615a7e1f7ff63b2f46fae59302f30f 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 63.838 T 21-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 SDY_3955 bb615a7e1f7ff63b2f46fae59302f30f 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 3.3E-180 T 21-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 Gene3D G3DSA:2.40.10.10 54 166 1.2E-11 T 21-04-2016 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 21-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 SUPERFAMILY SSF50494 32 270 6.13E-33 T 21-04-2016 IPR009003 Peptidase S1, PA clan SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PRINTS PR00839 V8 serine protease family signature 232 244 1.2E-23 T 21-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PRINTS PR00839 V8 serine protease family signature 178 191 1.2E-23 T 21-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PRINTS PR00839 V8 serine protease family signature 212 228 1.2E-23 T 21-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PRINTS PR00839 V8 serine protease family signature 44 61 1.2E-23 T 21-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PRINTS PR00839 V8 serine protease family signature 69 86 1.2E-23 T 21-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 Pfam PF00089 Trypsin 50 244 1.2E-11 T 21-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 PANTHER PTHR15462 2 261 6.3E-68 T 21-04-2016 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 Gene3D G3DSA:2.40.10.10 177 246 2.4E-9 T 21-04-2016 SDY_1555 0f576f0ea7db999e31ec0140bf4d6bb6 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 21-04-2016 IPR033116 Serine proteases, trypsin family, serine active site SDY_0748 9ebb494317573c762b972294049558f6 561 Gene3D G3DSA:3.30.70.1450 229 282 2.0E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 PANTHER PTHR30445 3 558 0.0 T 21-04-2016 SDY_0748 9ebb494317573c762b972294049558f6 561 Gene3D G3DSA:3.30.70.1450 303 374 3.6E-6 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 SUPERFAMILY SSF116726 291 374 7.06E-11 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 2.0E-40 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_0748 9ebb494317573c762b972294049558f6 561 Pfam PF06826 Predicted Permease Membrane Region 385 555 6.2E-43 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_0748 9ebb494317573c762b972294049558f6 561 Pfam PF02080 TrkA-C domain 229 281 1.4E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 Pfam PF02080 TrkA-C domain 304 371 1.4E-8 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 PANTHER PTHR30445:SF4 3 558 0.0 T 21-04-2016 SDY_0748 9ebb494317573c762b972294049558f6 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 4.7E-38 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_0748 9ebb494317573c762b972294049558f6 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 4.6E-44 T 21-04-2016 IPR006512 YidE/YbjL duplication SDY_0748 9ebb494317573c762b972294049558f6 561 SUPERFAMILY SSF116726 227 282 1.7E-10 T 21-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SDY_0748 9ebb494317573c762b972294049558f6 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.217 T 21-04-2016 IPR023017 Transport protein YbjL, putative SDY_3549 02a4136ab6f7ea75b5b883fb83095956 207 Gene3D G3DSA:3.40.50.720 4 202 1.5E-31 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3549 02a4136ab6f7ea75b5b883fb83095956 207 Pfam PF13460 NAD(P)H-binding 9 190 2.4E-35 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3549 02a4136ab6f7ea75b5b883fb83095956 207 SUPERFAMILY SSF51735 5 202 2.04E-28 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_3549 02a4136ab6f7ea75b5b883fb83095956 207 PANTHER PTHR15020 1 200 1.5E-28 T 21-04-2016 SDY_1862 a15c75f56152cf9a6059b67ea84ee2ce 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 96 8.6E-17 T 21-04-2016 IPR018660 C-type lysozyme, inhibitor SDY_1862 a15c75f56152cf9a6059b67ea84ee2ce 109 SUPERFAMILY SSF141488 28 106 1.24E-23 T 21-04-2016 IPR018660 C-type lysozyme, inhibitor SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 2.2E-9 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 2.2E-9 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.2E-9 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 2.2E-9 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 2.2E-9 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 433 8.6E-79 T 21-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 Gene3D G3DSA:1.20.1250.20 14 184 1.9E-25 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PANTHER PTHR23501 3 475 0.0 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 PANTHER PTHR23501:SF1 3 475 0.0 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 Pfam PF07690 Major Facilitator Superfamily 17 406 6.0E-46 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 Gene3D G3DSA:1.20.1250.20 261 457 6.4E-15 T 21-04-2016 SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 SUPERFAMILY SSF103473 245 457 3.01E-58 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_3993 25fd18a4cac33e0b5f6299439c777798 475 SUPERFAMILY SSF103473 13 195 3.01E-58 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 8.7E-12 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 8.7E-12 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 8.7E-12 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PANTHER PTHR22773 542 647 3.4E-237 T 21-04-2016 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PANTHER PTHR22773 1 489 3.4E-237 T 21-04-2016 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 Pfam PF00361 Proton-conducting membrane transporter 136 425 1.2E-53 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PANTHER PTHR22773:SF91 542 647 3.4E-237 T 21-04-2016 SDY_2671 0e1077957df7c592d3ad28c86b66ec5c 672 PANTHER PTHR22773:SF91 1 489 3.4E-237 T 21-04-2016 SDY_3623 2177f81e6b305ed683dc7fe8a2b8e1d5 185 Gene3D G3DSA:3.40.1000.10 52 183 3.7E-4 T 21-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich SDY_3623 2177f81e6b305ed683dc7fe8a2b8e1d5 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 2.0E-29 T 21-04-2016 IPR014894 Protein DcrB SDY_2610 bbcdc52b61c240fddf9cb08dd3f80928 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 1.2E-44 T 21-04-2016 SDY_2610 bbcdc52b61c240fddf9cb08dd3f80928 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 29.102 T 21-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 SDY_2610 bbcdc52b61c240fddf9cb08dd3f80928 253 PANTHER PTHR37468 2 253 2.9E-107 T 21-04-2016 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 Gene3D G3DSA:2.30.40.10 1 91 9.8E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 PANTHER PTHR11271:SF43 1 350 5.6E-189 T 21-04-2016 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 Gene3D G3DSA:2.30.40.10 259 349 9.9E-9 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 SUPERFAMILY SSF51338 1 50 4.03E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 SUPERFAMILY SSF51338 317 349 4.03E-10 T 21-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 PANTHER PTHR11271 1 350 5.6E-189 T 21-04-2016 SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 SUPERFAMILY SSF51556 50 317 9.07E-20 T 21-04-2016 IPR032466 Metal-dependent hydrolase SDY_4121 f2c51b78831aabfb837c76cad7dacb38 350 Pfam PF07969 Amidohydrolase family 194 350 3.5E-12 T 21-04-2016 IPR013108 Amidohydrolase 3 SDY_1970 9030c1c05bccbd63c9ee00333b30276d 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 1.3E-30 T 21-04-2016 IPR019672 Protein of unknown function DUF2627 SDY_1116 60dc0244e61b9d9d23b4a68998386248 167 PANTHER PTHR11431 1 164 2.1E-61 T 21-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 SDY_1116 60dc0244e61b9d9d23b4a68998386248 167 Gene3D G3DSA:1.20.1260.10 3 162 6.4E-37 T 21-04-2016 IPR012347 Ferritin-related SDY_1116 60dc0244e61b9d9d23b4a68998386248 167 SUPERFAMILY SSF47240 9 158 3.95E-35 T 21-04-2016 IPR009078 Ferritin-like superfamily SDY_1116 60dc0244e61b9d9d23b4a68998386248 167 Pfam PF00210 Ferritin-like domain 9 142 1.6E-25 T 21-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SDY_1116 60dc0244e61b9d9d23b4a68998386248 167 PANTHER PTHR11431:SF40 1 164 2.1E-61 T 21-04-2016 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.703 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:1.10.286.10 4 86 2.5E-32 T 21-04-2016 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 21-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 21-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:3.30.1130.10 92 220 6.5E-51 T 21-04-2016 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 PANTHER PTHR11109 1 222 3.0E-104 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.5E-86 T 21-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 SUPERFAMILY SSF55620 4 221 1.11E-76 T 21-04-2016 SDY_2127 2c242910cb3cdf4137502dac1ebc7215 222 Pfam PF01227 GTP cyclohydrolase I 41 218 2.7E-62 T 21-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 SUPERFAMILY SSF56784 10 238 2.21E-39 T 21-04-2016 IPR023214 HAD-like domain SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 PANTHER PTHR12725:SF65 1 238 2.8E-84 T 21-04-2016 SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 PANTHER PTHR12725 1 238 2.8E-84 T 21-04-2016 SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 199 3.4E-11 T 21-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 3.6E-14 T 21-04-2016 IPR023214 HAD-like domain SDY_3933 049dc1a59176a9a2e59241d3f95dec69 238 Gene3D G3DSA:3.40.50.1000 10 236 6.8E-29 T 21-04-2016 IPR023214 HAD-like domain SDY_4363 78c922f9484c512900437e5d5d8db3c6 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 1.9E-13 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_4363 78c922f9484c512900437e5d5d8db3c6 101 PANTHER PTHR33843 1 101 5.6E-48 T 21-04-2016 SDY_4363 78c922f9484c512900437e5d5d8db3c6 101 PANTHER PTHR33843:SF1 1 101 5.6E-48 T 21-04-2016 SDY_4363 78c922f9484c512900437e5d5d8db3c6 101 Gene3D G3DSA:3.40.50.270 4 93 2.4E-17 T 21-04-2016 SDY_4363 78c922f9484c512900437e5d5d8db3c6 101 SUPERFAMILY SSF52794 3 95 1.23E-17 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 Gene3D G3DSA:3.40.50.2000 1 139 3.7E-16 T 21-04-2016 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 Gene3D G3DSA:3.40.50.2000 204 348 1.7E-21 T 21-04-2016 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 Pfam PF06722 Protein of unknown function (DUF1205) 165 260 1.1E-35 T 21-04-2016 IPR010610 Domain of unknown function DUF1205 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 PANTHER PTHR11926 1 320 1.1E-24 T 21-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 SUPERFAMILY SSF53756 1 368 6.28E-69 T 21-04-2016 SDY_1026 082e82c696d6f72e8568a623a592c01f 371 PANTHER PTHR11926:SF16 1 320 1.1E-24 T 21-04-2016 SDY_2416 50604cc138c062c0df795e190538a633 102 SUPERFAMILY SSF47413 28 101 1.02E-12 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2416 50604cc138c062c0df795e190538a633 102 SMART SM00530 41 100 1.8E-10 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2416 50604cc138c062c0df795e190538a633 102 Pfam PF01381 Helix-turn-helix 44 97 3.5E-11 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2416 50604cc138c062c0df795e190538a633 102 Gene3D G3DSA:1.10.260.40 36 100 6.1E-17 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.833 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 SUPERFAMILY SSF55681 8 292 2.61E-134 T 21-04-2016 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:3.30.930.10 4 213 9.5E-107 T 21-04-2016 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 2.3E-178 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 PANTHER PTHR30075 1 302 2.2E-281 T 21-04-2016 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:1.20.58.180 215 298 5.4E-37 T 21-04-2016 SDY_4344 2455e392b06fb0d63a60f5dde5dbac53 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 5.5E-150 T 21-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 Pfam PF00083 Sugar (and other) transporter 28 422 7.7E-19 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 PANTHER PTHR23508:SF1 18 437 8.2E-178 T 21-04-2016 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 PANTHER PTHR23508 18 437 8.2E-178 T 21-04-2016 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 SUPERFAMILY SSF103473 21 435 1.83E-57 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 21-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 Gene3D G3DSA:1.20.1250.20 253 436 9.5E-22 T 21-04-2016 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 Gene3D G3DSA:1.20.1250.20 21 230 2.6E-18 T 21-04-2016 SDY_2254 954dc31bbc62302c926b2c1c3950792d 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 5.3E-150 T 21-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 SDY_4265 3691bc3a112b689e4110d399f97fdaaf 44 Pfam PF08052 PyrBI operon leader peptide 1 44 2.2E-34 T 21-04-2016 IPR012602 PyrBI operon leader peptide GO:0019856 SDY_4265 3691bc3a112b689e4110d399f97fdaaf 44 PIRSF PIRSF003249 1 44 5.9E-36 T 21-04-2016 IPR012602 PyrBI operon leader peptide GO:0019856 SDY_0336 bab745c09ee80710ad1f5407e19f9037 439 Pfam PF05525 Branched-chain amino acid transport protein 8 429 9.2E-161 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SDY_0336 bab745c09ee80710ad1f5407e19f9037 439 PANTHER PTHR30588 2 439 3.8E-237 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SDY_0336 bab745c09ee80710ad1f5407e19f9037 439 PANTHER PTHR30588:SF0 2 439 3.8E-237 T 21-04-2016 SDY_0336 bab745c09ee80710ad1f5407e19f9037 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.5E-165 T 21-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 PANTHER PTHR11808 3 395 1.3E-273 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 PIRSF PIRSF001434 1 395 4.0E-120 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.7E-121 T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 PANTHER PTHR11808:SF45 3 395 1.3E-273 T 21-04-2016 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 21-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 Gene3D G3DSA:3.90.1150.10 259 394 2.8E-40 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 Gene3D G3DSA:3.40.640.10 6 258 8.7E-73 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 3.6E-170 T 21-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 SDY_3065 ea4c89fcf8e9fa02aa8da4a46def30c3 395 SUPERFAMILY SSF53383 30 393 3.46E-89 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_4510 831a5687da56a321a6ae8999dc605323 118 SUPERFAMILY SSF142906 1 116 1.44E-35 T 21-04-2016 SDY_4510 831a5687da56a321a6ae8999dc605323 118 Pfam PF04237 YjbR 12 101 1.6E-18 T 21-04-2016 IPR007351 Uncharacterised protein YjbR SDY_4510 831a5687da56a321a6ae8999dc605323 118 PANTHER PTHR35145 1 118 1.8E-45 T 21-04-2016 SDY_2575 b17f6b13bb8da9d4f7164ab48778c2a3 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 9.0E-39 T 21-04-2016 IPR024470 Protein of unknown function DUF2545 SDY_2575 b17f6b13bb8da9d4f7164ab48778c2a3 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 1.0E-45 T 21-04-2016 IPR024470 Protein of unknown function DUF2545 SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 77 3.9E-8 T 21-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 Gene3D G3DSA:1.10.357.10 21 212 3.3E-35 T 21-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 PANTHER PTHR30055:SF39 17 234 4.6E-122 T 21-04-2016 SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 20 229 55.323 T 21-04-2016 IPR023764 Transcriptional repressor HTH, FabR SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 SUPERFAMILY SSF46689 20 96 7.56E-13 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3765 4a18fe7c691fd8116f967c88d2d181cf 234 PANTHER PTHR30055 17 234 4.6E-122 T 21-04-2016 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 SUPERFAMILY SSF54570 3 84 2.75E-35 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.549 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 PIRSF PIRSF002144 1 92 1.7E-31 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.6E-46 T 21-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 PANTHER PTHR11880 1 92 8.1E-58 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 21-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 Gene3D G3DSA:3.30.860.10 1 91 8.0E-41 T 21-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3492 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-25 T 21-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 21-04-2016 IPR000600 ROK family SDY_3397 cdd7a1af91437041c45871558d2d0257 291 PANTHER PTHR18964:SF140 1 287 8.4E-165 T 21-04-2016 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 48.634 T 21-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 Gene3D G3DSA:3.30.420.40 2 133 8.1E-34 T 21-04-2016 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 PANTHER PTHR18964 1 287 8.4E-165 T 21-04-2016 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 Gene3D G3DSA:3.30.420.40 134 260 1.7E-40 T 21-04-2016 SDY_3397 cdd7a1af91437041c45871558d2d0257 291 Pfam PF00480 ROK family 4 288 9.0E-91 T 21-04-2016 IPR000600 ROK family SDY_3397 cdd7a1af91437041c45871558d2d0257 291 SUPERFAMILY SSF53067 1 287 6.66E-54 T 21-04-2016 SDY_P203 0cbe77107210aa68b8988c5cbbda1d8a 215 Pfam PF04408 Helicase associated domain (HA2) 1 48 1.1E-7 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 SDY_P203 0cbe77107210aa68b8988c5cbbda1d8a 215 SMART SM00847 1 80 0.0025 T 21-04-2016 IPR007502 Helicase-associated domain GO:0004386 SDY_3952 841c5204136ea32468432b62f37eaee1 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 21-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SDY_3952 841c5204136ea32468432b62f37eaee1 461 Pfam PF00324 Amino acid permease 16 428 2.5E-103 T 21-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SDY_3952 841c5204136ea32468432b62f37eaee1 461 PIRSF PIRSF006060 1 461 1.7E-65 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_3952 841c5204136ea32468432b62f37eaee1 461 PANTHER PTHR11785:SF28 3 461 0.0 T 21-04-2016 SDY_3952 841c5204136ea32468432b62f37eaee1 461 PANTHER PTHR11785 3 461 0.0 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 Pfam PF00293 NUDIX domain 36 154 3.1E-18 T 21-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 PANTHER PTHR22769:SF25 1 178 5.0E-128 T 21-04-2016 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 SUPERFAMILY SSF55811 9 166 3.93E-36 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 PIRSF PIRSF017340 1 171 4.2E-76 T 21-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 Gene3D G3DSA:3.90.79.10 3 177 3.7E-63 T 21-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SDY_2495 c09d1c39e7c47ca8238b8b6e806a44fa 180 PANTHER PTHR22769 1 178 5.0E-128 T 21-04-2016 SDY_4528 abb6bc78c7082b14dc6f2c9e85482d7e 171 PANTHER PTHR33202 1 171 1.1E-98 T 21-04-2016 SDY_4528 abb6bc78c7082b14dc6f2c9e85482d7e 171 PANTHER PTHR33202:SF6 1 171 1.1E-98 T 21-04-2016 SDY_4528 abb6bc78c7082b14dc6f2c9e85482d7e 171 Pfam PF01475 Ferric uptake regulator family 20 138 5.9E-15 T 21-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SDY_4528 abb6bc78c7082b14dc6f2c9e85482d7e 171 Gene3D G3DSA:1.10.10.10 12 83 5.7E-15 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4528 abb6bc78c7082b14dc6f2c9e85482d7e 171 SUPERFAMILY SSF46785 12 144 5.85E-34 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3929 654589fbd0159975e9024582a2cf47d1 316 PANTHER PTHR21535:SF37 6 316 1.7E-172 T 21-04-2016 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 5.4E-115 T 21-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 6.5E-57 T 21-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 PANTHER PTHR21535 6 316 1.7E-172 T 21-04-2016 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 21-04-2016 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF143865 1 255 4.71E-38 T 21-04-2016 SDY_3929 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:1.20.58.340 240 316 2.6E-28 T 21-04-2016 SDY_1311 15ad060ca4177876456362ca6c422bf6 292 Gene3D G3DSA:3.30.420.10 119 282 3.5E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1311 15ad060ca4177876456362ca6c422bf6 292 Pfam PF00665 Integrase core domain 124 243 1.1E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1311 15ad060ca4177876456362ca6c422bf6 292 Pfam PF13276 HTH-like domain 62 104 2.3E-12 T 21-04-2016 IPR025948 HTH-like domain SDY_1311 15ad060ca4177876456362ca6c422bf6 292 SUPERFAMILY SSF53098 125 288 9.99E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 PANTHER PTHR34986 2 154 1.6E-95 T 21-04-2016 SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 PANTHER PTHR34986:SF2 2 154 1.6E-95 T 21-04-2016 SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 Gene3D G3DSA:2.60.120.370 1 152 8.1E-50 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 9.3E-42 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 2.3E-66 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_3396 caaa28dbae664bb7d58e5261e020e2b0 154 SUPERFAMILY SSF51197 1 152 7.96E-44 T 21-04-2016 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 Pfam PF00072 Response regulator receiver domain 7 103 1.0E-16 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 PANTHER PTHR26402 5 238 9.2E-157 T 21-04-2016 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 7.2E-21 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 PANTHER PTHR26402:SF548 5 238 9.2E-157 T 21-04-2016 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 SUPERFAMILY SSF52172 4 119 4.84E-26 T 21-04-2016 IPR011006 CheY-like superfamily SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 SMART SM00862 156 232 2.0E-19 T 21-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 SMART SM00448 5 111 3.9E-23 T 21-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 Gene3D G3DSA:1.10.10.10 137 234 7.5E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 Gene3D G3DSA:3.40.50.2300 4 136 5.7E-25 T 21-04-2016 SDY_1824 287c8265cae2d6ef83146e3bd647fa65 238 SUPERFAMILY SSF46894 138 233 1.47E-25 T 21-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SDY_4474 63fbcab8fe9a0a46476351c6e84107cf 236 PANTHER PTHR33217 1 221 1.8E-91 T 21-04-2016 SDY_4474 63fbcab8fe9a0a46476351c6e84107cf 236 Pfam PF00872 Transposase, Mutator family 10 221 5.5E-61 T 21-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 1.4E-42 T 21-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 PANTHER PTHR12735:SF26 1 138 3.1E-65 T 21-04-2016 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 PANTHER PTHR12735 1 138 3.1E-65 T 21-04-2016 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 SUPERFAMILY SSF82649 3 135 3.3E-44 T 21-04-2016 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.533 T 21-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 SDY_1910 485ce2cdc5273cb921e72a2b8b4aad5a 138 Gene3D G3DSA:3.90.1010.10 1 137 1.5E-51 T 21-04-2016 SDY_4569 457f9e85f95385ffbf6ca67e29d0988a 192 PANTHER PTHR30443:SF3 1 192 4.7E-152 T 21-04-2016 SDY_4569 457f9e85f95385ffbf6ca67e29d0988a 192 Gene3D G3DSA:3.40.720.10 4 172 5.9E-12 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_4569 457f9e85f95385ffbf6ca67e29d0988a 192 PANTHER PTHR30443 1 192 4.7E-152 T 21-04-2016 SDY_4569 457f9e85f95385ffbf6ca67e29d0988a 192 SUPERFAMILY SSF53649 3 172 3.74E-14 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_4569 457f9e85f95385ffbf6ca67e29d0988a 192 Pfam PF00884 Sulfatase 3 167 1.2E-31 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 190 201 - T 21-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 423 472 2.0E-9 T 21-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PANTHER PTHR22807:SF38 1 371 1.9E-257 T 21-04-2016 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PANTHER PTHR22807 1 371 1.9E-257 T 21-04-2016 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 43 312 1.2E-116 T 21-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 Gene3D G3DSA:3.40.50.150 104 312 4.9E-59 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 SUPERFAMILY SSF53335 9 312 3.77E-67 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 311 6.1E-46 T 21-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 8 477 65.032 T 21-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 93 107 3.5E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 124 134 3.5E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 257 3.5E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 295 312 3.5E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 191 203 3.5E-28 T 21-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_1986 bcee51af0be3118f38f6c670955c5f3a 481 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 10 107 1.4E-28 T 21-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SDY_2553 10d44ac0a301d71c8c40e9d983502409 125 PANTHER PTHR33293 1 124 1.5E-41 T 21-04-2016 SDY_2553 10d44ac0a301d71c8c40e9d983502409 125 Pfam PF03400 IS1 transposase 1 125 2.8E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1830 a89a75563b191c1e39e978032100403b 502 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 7.0E-139 T 21-04-2016 IPR010352 Protein of unknown function DUF945 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 151 1.4E-22 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 SUPERFAMILY SSF56935 25 567 8.06E-92 T 21-04-2016 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 PANTHER PTHR32552:SF13 1 567 0.0 T 21-04-2016 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 Gene3D G3DSA:2.170.130.10 28 151 5.2E-28 T 21-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 Pfam PF00593 TonB dependent receptor 448 567 1.9E-17 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 PANTHER PTHR32552 1 567 0.0 T 21-04-2016 SDY_1954 289315a2fbc25924bf0678ca485f3e83 567 Gene3D G3DSA:2.40.170.20 152 567 4.0E-72 T 21-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SDY_1432 7f73301af75938c9ed947358615523da 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 6.0E-15 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_1432 7f73301af75938c9ed947358615523da 51 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 6.0E-15 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_1432 7f73301af75938c9ed947358615523da 51 Pfam PF01848 Hok/gef family 6 47 6.8E-21 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_1432 7f73301af75938c9ed947358615523da 51 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 4 48 2.0E-6 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_1432 7f73301af75938c9ed947358615523da 51 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 11 30 - T 21-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PANTHER PTHR35177 1 79 8.4E-27 T 21-04-2016 SDY_3083 3799010f2d3257da5915e46316f35c2e 82 SUPERFAMILY SSF159127 1 76 9.55E-24 T 21-04-2016 SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-24 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.4E-24 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.4E-24 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.4E-24 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_3083 3799010f2d3257da5915e46316f35c2e 82 PANTHER PTHR35177:SF2 1 79 8.4E-27 T 21-04-2016 SDY_3083 3799010f2d3257da5915e46316f35c2e 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 21-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site SDY_3083 3799010f2d3257da5915e46316f35c2e 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 9.0E-30 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_3083 3799010f2d3257da5915e46316f35c2e 82 Pfam PF01455 HupF/HypC family 1 72 4.0E-25 T 21-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SDY_2962 29eb77e08da3830fbc2e3838ec68d8fd 125 Pfam PF03400 IS1 transposase 1 125 1.3E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2962 29eb77e08da3830fbc2e3838ec68d8fd 125 PANTHER PTHR33293 1 124 2.5E-42 T 21-04-2016 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 PANTHER PTHR11751 5 390 3.8E-289 T 21-04-2016 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 Gene3D G3DSA:3.40.640.10 44 250 1.8E-42 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 SUPERFAMILY SSF53383 1 386 1.34E-83 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 Pfam PF00155 Aminotransferase class I and II 30 379 2.4E-58 T 21-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 PANTHER PTHR11751:SF361 5 390 3.8E-289 T 21-04-2016 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 5.7E-113 T 21-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SDY_1845 6f75164ebd600bbea830c7fedd4102f5 390 Gene3D G3DSA:3.90.1150.10 251 387 3.2E-41 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 Gene3D G3DSA:3.40.80.10 40 197 9.3E-57 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 SMART SM00644 32 178 8.0E-43 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 5.3E-20 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 SUPERFAMILY SSF55846 24 194 1.7E-52 T 21-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 PANTHER PTHR30417 6 276 1.8E-83 T 21-04-2016 SDY_2396 099224adbf3e962de3ea727709a6ed03 276 SUPERFAMILY SSF47090 198 273 2.82E-21 T 21-04-2016 IPR002477 Peptidoglycan binding-like SDY_2385 7efbbe0ef78aa6f4460ec1bf2222686b 552 SUPERFAMILY SSF52540 1 331 5.42E-16 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2385 7efbbe0ef78aa6f4460ec1bf2222686b 552 PANTHER PTHR32182 1 551 0.0 T 21-04-2016 SDY_2385 7efbbe0ef78aa6f4460ec1bf2222686b 552 Gene3D G3DSA:3.40.50.300 1 344 3.6E-21 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2385 7efbbe0ef78aa6f4460ec1bf2222686b 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.9E-155 T 21-04-2016 IPR022602 Protein of unknown function DUF2813 SDY_2385 7efbbe0ef78aa6f4460ec1bf2222686b 552 PANTHER PTHR32182:SF12 1 551 0.0 T 21-04-2016 SDY_1087 64ce94611ad24a457523dab461191fcb 137 Pfam PF13987 YedD-like protein 25 129 1.2E-54 T 21-04-2016 IPR025596 YedD-like protein SDY_2277 e3afac87285a3c2409552decee26c7d5 266 PANTHER PTHR20858 1 266 1.2E-116 T 21-04-2016 SDY_2277 e3afac87285a3c2409552decee26c7d5 266 SUPERFAMILY SSF53613 5 265 1.06E-80 T 21-04-2016 IPR029056 Ribokinase-like SDY_2277 e3afac87285a3c2409552decee26c7d5 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 4.9E-108 T 21-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SDY_2277 e3afac87285a3c2409552decee26c7d5 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 4.5E-95 T 21-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SDY_2277 e3afac87285a3c2409552decee26c7d5 266 PANTHER PTHR20858:SF17 1 266 1.2E-116 T 21-04-2016 SDY_2277 e3afac87285a3c2409552decee26c7d5 266 Gene3D G3DSA:3.40.1190.20 6 263 4.2E-100 T 21-04-2016 IPR029056 Ribokinase-like SDY_2682 06bbef67f05e6a9bce12f6fea70defe0 353 PANTHER PTHR21716:SF19 1 353 9.1E-162 T 21-04-2016 SDY_2682 06bbef67f05e6a9bce12f6fea70defe0 353 PANTHER PTHR21716 1 353 9.1E-162 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_2682 06bbef67f05e6a9bce12f6fea70defe0 353 Pfam PF01594 Domain of unknown function DUF20 20 345 4.6E-86 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_3668 b994f7e159789c2d72f9d9ecfbe6ddb1 75 Pfam PF04023 FeoA domain 5 71 3.0E-8 T 21-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SDY_3668 b994f7e159789c2d72f9d9ecfbe6ddb1 75 PANTHER PTHR33238 5 75 1.6E-24 T 21-04-2016 SDY_3668 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SUPERFAMILY SSF50037 2 73 7.33E-17 T 21-04-2016 IPR008988 Transcriptional repressor, C-terminal SDY_3668 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SMART SM00899 1 72 4.2E-8 T 21-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 Gene3D G3DSA:3.40.50.300 97 349 1.2E-105 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.6E-101 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 PANTHER PTHR23264:SF19 7 367 2.8E-201 T 21-04-2016 SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 SUPERFAMILY SSF117916 15 85 1.05E-5 T 21-04-2016 SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 SUPERFAMILY SSF52540 108 355 1.89E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 21-04-2016 IPR000808 Mrp, conserved site GO:0005524 SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.76 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SDY_2182 13503b9b1aa078fd686666a3760e61b0 369 PANTHER PTHR23264 7 367 2.8E-201 T 21-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 6.8E-82 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 SUPERFAMILY SSF64005 19 240 3.27E-88 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 40.266 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 PANTHER PTHR10291 19 245 7.7E-124 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 21-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 Gene3D G3DSA:3.40.1180.10 19 247 6.2E-99 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_0190 fc7f42ebb3f70449af30c88ed690e842 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 244 6.6E-108 T 21-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SDY_2484 3196ce19e8d8d88083060387212e6a7a 147 PANTHER PTHR11058:SF5 2 129 4.9E-75 T 21-04-2016 SDY_2484 3196ce19e8d8d88083060387212e6a7a 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 5.0E-31 T 21-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SDY_2484 3196ce19e8d8d88083060387212e6a7a 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.913 T 21-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SDY_2484 3196ce19e8d8d88083060387212e6a7a 147 PANTHER PTHR11058 2 129 4.9E-75 T 21-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF46609 1 84 1.22E-36 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 Gene3D G3DSA:1.10.287.990 20 82 3.4E-26 T 21-04-2016 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.5E-35 T 21-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PANTHER PTHR11404:SF8 1 193 1.8E-112 T 21-04-2016 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF54719 84 192 2.23E-45 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.1E-40 T 21-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PIRSF PIRSF000349 1 193 1.7E-87 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 21-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1882 ce422a1e705d91080141d9bb318b50ce 193 PANTHER PTHR11404 1 193 1.8E-112 T 21-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_2287 1eb3dbdf312a502d6d103352f4bfa232 597 Pfam PF13953 PapC C-terminal domain 524 584 2.0E-9 T 21-04-2016 IPR025949 PapC-like, C-terminal domain SDY_2287 1eb3dbdf312a502d6d103352f4bfa232 597 PANTHER PTHR30451:SF3 1 597 0.0 T 21-04-2016 SDY_2287 1eb3dbdf312a502d6d103352f4bfa232 597 Pfam PF00577 Outer membrane usher protein 1 514 1.3E-172 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_2287 1eb3dbdf312a502d6d103352f4bfa232 597 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 60 70 - T 21-04-2016 IPR018030 Fimbrial membrane usher, conserved site SDY_2287 1eb3dbdf312a502d6d103352f4bfa232 597 PANTHER PTHR30451 1 597 0.0 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 2.5E-81 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 Gene3D G3DSA:3.90.550.10 6 233 8.4E-79 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2946 3aafe2206d465d52770b771f2cda519c 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 8.5E-96 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 30.95 T 21-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 21-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 PANTHER PTHR32125 8 236 4.3E-86 T 21-04-2016 SDY_2946 3aafe2206d465d52770b771f2cda519c 236 SUPERFAMILY SSF53448 8 227 9.97E-62 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2946 3aafe2206d465d52770b771f2cda519c 236 PANTHER PTHR32125:SF4 8 236 4.3E-86 T 21-04-2016 SDY_1450a a0888a57e778be76e34b3574ca488bce 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 6.1E-42 T 21-04-2016 IPR007054 Lysis protein S SDY_1450a a0888a57e778be76e34b3574ca488bce 71 PIRSF PIRSF030786 1 71 2.8E-48 T 21-04-2016 IPR007054 Lysis protein S SDY_0938 0b784f1e718cda3780049f188bca61c1 152 PANTHER PTHR30492 2 151 4.2E-91 T 21-04-2016 SDY_0938 0b784f1e718cda3780049f188bca61c1 152 SMART SM00851 25 118 6.7E-24 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0938 0b784f1e718cda3780049f188bca61c1 152 Gene3D G3DSA:3.40.50.1380 2 151 3.5E-66 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0938 0b784f1e718cda3780049f188bca61c1 152 PIRSF PIRSF006614 8 151 5.2E-66 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 SDY_0938 0b784f1e718cda3780049f188bca61c1 152 SUPERFAMILY SSF52335 2 147 7.46E-59 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0938 0b784f1e718cda3780049f188bca61c1 152 Pfam PF02142 MGS-like domain 26 118 2.7E-18 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_0938 0b784f1e718cda3780049f188bca61c1 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 41.132 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 SDY_0938 0b784f1e718cda3780049f188bca61c1 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.8E-74 T 21-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 SDY_0938 0b784f1e718cda3780049f188bca61c1 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 21-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 SUPERFAMILY SSF52540 4 226 4.56E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2382 b30c58355b213116804b964cce2ce5b6 650 PANTHER PTHR24220:SF86 314 323 2.9E-108 T 21-04-2016 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 PANTHER PTHR24220:SF86 6 235 2.9E-108 T 21-04-2016 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 PANTHER PTHR24220 314 323 2.9E-108 T 21-04-2016 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 PANTHER PTHR24220 6 235 2.9E-108 T 21-04-2016 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 SMART SM00382 33 220 1.1E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_2382 b30c58355b213116804b964cce2ce5b6 650 Gene3D G3DSA:3.40.50.300 2 223 3.2E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2382 b30c58355b213116804b964cce2ce5b6 650 Pfam PF02687 FtsX-like permease family 527 643 4.5E-8 T 21-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 Pfam PF12704 MacB-like periplasmic core domain 272 491 3.1E-40 T 21-04-2016 IPR025857 MacB-like periplasmic core domain SDY_2382 b30c58355b213116804b964cce2ce5b6 650 Pfam PF00005 ABC transporter 24 172 9.1E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_2382 b30c58355b213116804b964cce2ce5b6 650 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 Pfam PF01381 Helix-turn-helix 52 96 2.6E-7 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 SUPERFAMILY SSF47413 52 107 2.36E-11 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 Gene3D G3DSA:1.10.260.40 51 107 2.3E-20 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 PANTHER PTHR36511:SF3 8 105 1.7E-37 T 21-04-2016 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 SMART SM00530 51 106 0.0034 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_4143 7514d050771fff879eb0cdc34cf45860 107 PANTHER PTHR36511 8 105 1.7E-37 T 21-04-2016 SDY_2570 7e0148b9955b55d6cbdc9ebbfda702b9 314 PANTHER PTHR36838 1 313 1.9E-106 T 21-04-2016 SDY_2570 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 6 161 8.1E-35 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SDY_2570 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 166 307 1.7E-28 T 21-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SDY_2570 7e0148b9955b55d6cbdc9ebbfda702b9 314 PANTHER PTHR36838:SF1 1 313 1.9E-106 T 21-04-2016 SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 PANTHER PTHR30041:SF0 1 136 5.9E-56 T 21-04-2016 SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 3.3E-39 T 21-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 Pfam PF03960 ArsC family 7 115 9.3E-20 T 21-04-2016 IPR006660 Arsenate reductase-like SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 Gene3D G3DSA:3.40.30.10 1 140 1.5E-61 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 PANTHER PTHR30041 1 136 5.9E-56 T 21-04-2016 SDY_3559 58c33dca28aecb28cd2f34cc29e58dc8 141 SUPERFAMILY SSF52833 3 137 6.31E-38 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_3048 fe608500146ab1e17090e85a155a09a4 229 Gene3D G3DSA:3.40.600.10 7 227 3.2E-81 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SDY_3048 fe608500146ab1e17090e85a155a09a4 229 SMART SM00927 59 157 1.4E-64 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SDY_3048 fe608500146ab1e17090e85a155a09a4 229 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.5E-34 T 21-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 SDY_3048 fe608500146ab1e17090e85a155a09a4 229 SUPERFAMILY SSF52980 7 228 4.02E-80 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_3048 fe608500146ab1e17090e85a155a09a4 229 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 2.6E-116 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 SDY_3048 fe608500146ab1e17090e85a155a09a4 229 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 229 157.025 T 21-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 SDY_0861a 2c96321249c0c7acae0a806608145ff8 90 PANTHER PTHR33293 1 89 3.4E-20 T 21-04-2016 SDY_0861a 2c96321249c0c7acae0a806608145ff8 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-22 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0861a 2c96321249c0c7acae0a806608145ff8 90 Pfam PF12759 InsA C-terminal domain 42 86 1.3E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_P199 1c2548fb036695aa9043a44e681e8ca1 66 Pfam PF02834 LigT like Phosphoesterase 1 65 8.1E-10 T 21-04-2016 IPR014051 Phosphoesterase, HXTX SDY_P199 1c2548fb036695aa9043a44e681e8ca1 66 SUPERFAMILY SSF55144 1 65 7.06E-14 T 21-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SDY_P199 1c2548fb036695aa9043a44e681e8ca1 66 PANTHER PTHR35561 1 66 5.6E-15 T 21-04-2016 SDY_P199 1c2548fb036695aa9043a44e681e8ca1 66 Gene3D G3DSA:3.90.1140.10 1 65 2.5E-15 T 21-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SDY_P199 1c2548fb036695aa9043a44e681e8ca1 66 PANTHER PTHR35561:SF1 1 66 5.6E-15 T 21-04-2016 SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 SMART SM00382 28 221 5.7E-20 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 SUPERFAMILY SSF52540 4 243 2.66E-78 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 PIRSF PIRSF039085 1 249 1.2E-111 T 21-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 PANTHER PTHR24220:SF327 5 248 2.8E-144 T 21-04-2016 SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 Pfam PF00005 ABC transporter 19 173 4.6E-36 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 Gene3D G3DSA:3.40.50.300 3 245 3.0E-87 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 PANTHER PTHR24220 5 248 2.8E-144 T 21-04-2016 SDY_1100 a89c66aac09d2f67e88c675ce3feb99b 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.481 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 PANTHER PTHR11807 1 288 6.8E-123 T 21-04-2016 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 PIRSF PIRSF004976 1 273 2.6E-77 T 21-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 PANTHER PTHR11807:SF16 1 288 6.8E-123 T 21-04-2016 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 SUPERFAMILY SSF52402 17 235 9.22E-54 T 21-04-2016 SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 Gene3D G3DSA:3.40.50.620 23 206 2.3E-21 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1426 de04b902ae0eb40775b9bfcd66018791 311 Pfam PF01171 PP-loop family 42 204 1.5E-13 T 21-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SDY_0954 5540dea0da3ce4f8073c1ee0a0e44b41 378 PANTHER PTHR30365:SF2 1 378 1.3E-304 T 21-04-2016 SDY_0954 5540dea0da3ce4f8073c1ee0a0e44b41 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.9E-97 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_0954 5540dea0da3ce4f8073c1ee0a0e44b41 378 PANTHER PTHR30365 1 378 1.3E-304 T 21-04-2016 SDY_0954 5540dea0da3ce4f8073c1ee0a0e44b41 378 PIRSF PIRSF000267 2 377 2.4E-117 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_0954 5540dea0da3ce4f8073c1ee0a0e44b41 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.6E-198 T 21-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SDY_1757 3dfd4b18284489026a9aadbd7f260923 447 PANTHER PTHR39479 1 447 1.1E-302 T 21-04-2016 SDY_1757 3dfd4b18284489026a9aadbd7f260923 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 3.1E-121 T 21-04-2016 IPR009770 Domain of unknown function DUF1338 SDY_1757 3dfd4b18284489026a9aadbd7f260923 447 PANTHER PTHR39479:SF2 1 447 1.1E-302 T 21-04-2016 SDY_1757 3dfd4b18284489026a9aadbd7f260923 447 SMART SM01150 11 401 5.5E-231 T 21-04-2016 IPR009770 Domain of unknown function DUF1338 SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 PANTHER PTHR24220 9 219 2.1E-100 T 21-04-2016 SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 Gene3D G3DSA:3.40.50.300 5 219 7.2E-59 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 SMART SM00382 32 213 6.0E-12 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 Pfam PF00005 ABC transporter 23 166 2.4E-31 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 SUPERFAMILY SSF52540 5 211 8.46E-55 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0409 9ee3fa39c3b4c1544e295623ad2de22c 225 PANTHER PTHR24220:SF410 9 219 2.1E-100 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 SMART SM00382 359 540 2.1E-15 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 SMART SM00382 37 271 6.1E-11 T 21-04-2016 IPR003593 AAA+ ATPase domain SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220 12 245 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 Gene3D G3DSA:3.40.50.300 329 557 3.1E-68 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 Gene3D G3DSA:3.40.50.300 4 232 2.4E-60 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 21-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220:SF546 273 305 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 SUPERFAMILY SSF52540 329 554 3.8E-61 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220 273 305 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 SUPERFAMILY SSF52540 10 231 8.98E-54 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220 350 454 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220:SF546 12 245 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 PANTHER PTHR24220:SF546 350 454 0.0 T 21-04-2016 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 Pfam PF00005 ABC transporter 351 494 5.0E-29 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_0809 a84f219b3b467d9f16e456a6e19cb37d 583 Pfam PF00005 ABC transporter 31 170 8.1E-25 T 21-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 SUPERFAMILY SSF54427 25 129 6.13E-37 T 21-04-2016 IPR032710 NTF2-like domain SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 SUPERFAMILY SSF103642 132 151 2.94E-7 T 21-04-2016 SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 Pfam PF02810 SEC-C motif 3 19 1.2E-4 T 21-04-2016 IPR004027 SEC-C motif SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 Pfam PF02810 SEC-C motif 134 152 3.5E-8 T 21-04-2016 IPR004027 SEC-C motif SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 30.183 T 21-04-2016 IPR023006 Uncharacterised protein family UPF0225 SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 PANTHER PTHR33747 2 152 1.0E-37 T 21-04-2016 SDY_1285 1c8313a40435f263a561ea1d13d53e55 152 Gene3D G3DSA:3.10.450.50 2 152 2.2E-54 T 21-04-2016 IPR032710 NTF2-like domain SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 SUPERFAMILY SSF103473 14 388 3.14E-50 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 Pfam PF07690 Major Facilitator Superfamily 25 334 3.5E-32 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 1 394 47.16 T 21-04-2016 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 PANTHER PTHR23501:SF90 1 394 0.0 T 21-04-2016 SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 Gene3D G3DSA:1.20.1250.20 21 205 3.1E-25 T 21-04-2016 SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 PANTHER PTHR23501 1 394 0.0 T 21-04-2016 SDY_4141 bd3794ae85a075e278763f48e35e88a7 394 Gene3D G3DSA:1.20.1250.20 211 387 4.7E-9 T 21-04-2016 SDY_2240 2e2605b6277310b8ca240b5fda2e8f88 181 PIRSF PIRSF006135 1 181 3.6E-65 T 21-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SDY_2240 2e2605b6277310b8ca240b5fda2e8f88 181 Gene3D G3DSA:3.40.50.300 2 181 8.8E-70 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2240 2e2605b6277310b8ca240b5fda2e8f88 181 PANTHER PTHR34848 1 181 3.3E-77 T 21-04-2016 SDY_2240 2e2605b6277310b8ca240b5fda2e8f88 181 SUPERFAMILY SSF52540 2 181 1.57E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2240 2e2605b6277310b8ca240b5fda2e8f88 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 4.9E-64 T 21-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SDY_4490 9b841e676d92fd3f7aec444bbb45e3e3 258 Gene3D G3DSA:3.30.420.10 66 226 4.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4490 9b841e676d92fd3f7aec444bbb45e3e3 258 PANTHER PTHR32552 2 235 2.4E-61 T 21-04-2016 SDY_4490 9b841e676d92fd3f7aec444bbb45e3e3 258 Pfam PF13276 HTH-like domain 5 47 4.3E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_4490 9b841e676d92fd3f7aec444bbb45e3e3 258 SUPERFAMILY SSF53098 65 229 8.95E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4490 9b841e676d92fd3f7aec444bbb45e3e3 258 Pfam PF00665 Integrase core domain 72 186 5.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.069 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 Pfam PF00146 NADH dehydrogenase 17 317 1.5E-120 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 PANTHER PTHR11432 1 321 1.4E-243 T 21-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 21-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 21-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SDY_2478 5e3d279c7a066adfaa3edd0db93e2633 325 PANTHER PTHR11432:SF8 1 321 1.4E-243 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 PANTHER PTHR32309:SF16 1 349 2.1E-273 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 9 348 57.874 T 21-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 Gene3D G3DSA:3.30.1890.10 55 222 1.7E-93 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 Gene3D G3DSA:3.30.1890.10 258 319 1.7E-93 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 PANTHER PTHR32309 1 349 2.1E-273 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 SUPERFAMILY SSF160355 55 319 5.62E-88 T 21-04-2016 SDY_3963 e056d5d7102a72027c0425e9b70f1cc9 349 Pfam PF02706 Chain length determinant protein 16 195 1.4E-14 T 21-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SDY_1052 025546add4ecdc995564d1df347b9db6 80 Pfam PF10733 Protein of unknown function (DUF2525) 23 80 2.9E-33 T 21-04-2016 IPR019669 Uncharacterised bacterial stress protein YodD SDY_0923 ba9da5d3369f40e8b709ded24c498a1d 417 PANTHER PTHR30462:SF3 1 417 2.4E-281 T 21-04-2016 SDY_0923 ba9da5d3369f40e8b709ded24c498a1d 417 Pfam PF04403 Paraquat-inducible protein A 49 200 2.4E-40 T 21-04-2016 IPR007498 Paraquat-inducible protein A SDY_0923 ba9da5d3369f40e8b709ded24c498a1d 417 Pfam PF04403 Paraquat-inducible protein A 253 408 6.6E-54 T 21-04-2016 IPR007498 Paraquat-inducible protein A SDY_0923 ba9da5d3369f40e8b709ded24c498a1d 417 PANTHER PTHR30462 1 417 2.4E-281 T 21-04-2016 SDY_0923 ba9da5d3369f40e8b709ded24c498a1d 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 1.6E-199 T 21-04-2016 IPR005219 Conserved hypothetical protein CHP00155 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 PANTHER PTHR10174:SF2 48 337 2.9E-53 T 21-04-2016 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 PIRSF PIRSF000148 4 337 1.6E-100 T 21-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 6.0E-42 T 21-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 2.1E-25 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 PANTHER PTHR10174 48 337 2.9E-53 T 21-04-2016 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 SMART SM00859 6 121 1.6E-32 T 21-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 SUPERFAMILY SSF55347 132 319 1.34E-50 T 21-04-2016 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 Gene3D G3DSA:3.40.50.720 1 144 7.1E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 Gene3D G3DSA:3.30.360.10 145 314 2.5E-51 T 21-04-2016 SDY_2518 306e852746e166eb12775bf4f7f57a9e 337 SUPERFAMILY SSF51735 5 157 7.5E-43 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4574 3b4b0f8cb62304036d2e6f87f5a6c188 237 Gene3D G3DSA:3.30.420.10 66 226 1.8E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4574 3b4b0f8cb62304036d2e6f87f5a6c188 237 PANTHER PTHR32552 2 235 1.9E-60 T 21-04-2016 SDY_4574 3b4b0f8cb62304036d2e6f87f5a6c188 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_4574 3b4b0f8cb62304036d2e6f87f5a6c188 237 Pfam PF00665 Integrase core domain 72 186 4.3E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_4574 3b4b0f8cb62304036d2e6f87f5a6c188 237 SUPERFAMILY SSF53098 65 229 3.79E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 SMART SM01130 4 293 7.5E-88 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PIRSF PIRSF001365 1 297 5.3E-85 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 52.009 T 21-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 21-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PANTHER PTHR12128:SF30 1 296 1.1E-156 T 21-04-2016 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PANTHER PTHR12128 1 296 1.1E-156 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 Gene3D G3DSA:3.20.20.70 4 292 1.8E-87 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-21 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.4E-21 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.4E-21 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-21 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 SUPERFAMILY SSF51569 5 291 6.7E-82 T 21-04-2016 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.6E-113 T 21-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 21-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SDY_3400 8c6264609850a1927d3dae67989bc9cb 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 297 8.6E-173 T 21-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 SDY_2016 019dcd30e6ed82e07758947482395022 416 SMART SM01329 28 412 5.7E-181 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_2016 019dcd30e6ed82e07758947482395022 416 Gene3D G3DSA:3.40.718.10 10 416 2.3E-170 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_2016 019dcd30e6ed82e07758947482395022 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 21-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_2016 019dcd30e6ed82e07758947482395022 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 3.4E-241 T 21-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835:SF52 1 164 1.1E-246 T 21-04-2016 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835:SF52 188 255 1.1E-246 T 21-04-2016 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835:SF52 275 416 1.1E-246 T 21-04-2016 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835 1 164 1.1E-246 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835 188 255 1.1E-246 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_2016 019dcd30e6ed82e07758947482395022 416 PANTHER PTHR11835 275 416 1.1E-246 T 21-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SDY_2016 019dcd30e6ed82e07758947482395022 416 SUPERFAMILY SSF53659 3 416 3.46E-150 T 21-04-2016 SDY_2016 019dcd30e6ed82e07758947482395022 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 2.5E-117 T 21-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SDY_0249 bed1f66d1b7467d43f99be2dbba2748d 255 Gene3D G3DSA:3.60.20.10 1 248 1.3E-67 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_0249 bed1f66d1b7467d43f99be2dbba2748d 255 PANTHER PTHR11907 1 254 4.5E-134 T 21-04-2016 SDY_0249 bed1f66d1b7467d43f99be2dbba2748d 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.1E-114 T 21-04-2016 IPR026869 Putative glutamine amidotransferase type 2 SDY_0249 bed1f66d1b7467d43f99be2dbba2748d 255 PANTHER PTHR11907:SF10 1 254 4.5E-134 T 21-04-2016 SDY_0249 bed1f66d1b7467d43f99be2dbba2748d 255 SUPERFAMILY SSF56235 2 253 1.29E-52 T 21-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SDY_1206 9d5029004b702bc54723daa4db8308a8 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.1E-28 T 21-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SDY_1206 9d5029004b702bc54723daa4db8308a8 270 PANTHER PTHR13696 1 258 2.1E-95 T 21-04-2016 SDY_1206 9d5029004b702bc54723daa4db8308a8 270 PIRSF PIRSF003092 1 270 3.6E-100 T 21-04-2016 IPR025501 ATP binding protein MinD SDY_1206 9d5029004b702bc54723daa4db8308a8 270 Gene3D G3DSA:3.40.50.300 1 248 1.5E-57 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1206 9d5029004b702bc54723daa4db8308a8 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-110 T 21-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 SDY_1206 9d5029004b702bc54723daa4db8308a8 270 SUPERFAMILY SSF52540 1 268 2.75E-53 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1206 9d5029004b702bc54723daa4db8308a8 270 PANTHER PTHR13696:SF1 1 258 2.1E-95 T 21-04-2016 SDY_1458 71b17312e533e1f813900d13a82c2317 168 Pfam PF00582 Universal stress protein family 25 168 1.2E-29 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_1458 71b17312e533e1f813900d13a82c2317 168 SUPERFAMILY SSF52402 27 168 9.21E-31 T 21-04-2016 SDY_1458 71b17312e533e1f813900d13a82c2317 168 Gene3D G3DSA:3.40.50.620 27 168 9.7E-35 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_1458 71b17312e533e1f813900d13a82c2317 168 PANTHER PTHR31964 25 168 9.8E-31 T 21-04-2016 SDY_1458 71b17312e533e1f813900d13a82c2317 168 PANTHER PTHR31964:SF42 25 168 9.8E-31 T 21-04-2016 SDY_1458 71b17312e533e1f813900d13a82c2317 168 PRINTS PR01438 Universal stress protein signature 129 141 1.0E-8 T 21-04-2016 IPR006015 Universal stress protein A SDY_1458 71b17312e533e1f813900d13a82c2317 168 PRINTS PR01438 Universal stress protein signature 26 44 1.0E-8 T 21-04-2016 IPR006015 Universal stress protein A SDY_1458 71b17312e533e1f813900d13a82c2317 168 PRINTS PR01438 Universal stress protein signature 146 168 1.0E-8 T 21-04-2016 IPR006015 Universal stress protein A SDY_0376 eacf53173f70a9aa6faa437deee612c5 87 Pfam PF01306 LacY proton/sugar symporter 1 82 2.4E-40 T 21-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 SDY_0376 eacf53173f70a9aa6faa437deee612c5 87 Gene3D G3DSA:1.20.1250.20 2 82 1.8E-8 T 21-04-2016 SDY_0376 eacf53173f70a9aa6faa437deee612c5 87 PRINTS PR00174 LacY proton/sugar symporter family signature 63 81 3.0E-23 T 21-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 SDY_0376 eacf53173f70a9aa6faa437deee612c5 87 PRINTS PR00174 LacY proton/sugar symporter family signature 21 43 3.0E-23 T 21-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 SDY_4285 9e112940d1449b2cad5263f01d148b10 366 PANTHER PTHR33529 2 363 3.4E-139 T 21-04-2016 SDY_4285 9e112940d1449b2cad5263f01d148b10 366 PANTHER PTHR33529:SF2 2 363 3.4E-139 T 21-04-2016 SDY_4285 9e112940d1449b2cad5263f01d148b10 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.3E-115 T 21-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 SDY_4285 9e112940d1449b2cad5263f01d148b10 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 7.8E-73 T 21-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SDY_3027 de932e898f4776101ae5b563fce85d5a 76 Gene3D G3DSA:2.30.30.100 21 76 7.1E-34 T 21-04-2016 SDY_3027 de932e898f4776101ae5b563fce85d5a 76 PANTHER PTHR37011 2 76 1.1E-43 T 21-04-2016 SDY_3027 de932e898f4776101ae5b563fce85d5a 76 SUPERFAMILY SSF50182 24 74 5.07E-20 T 21-04-2016 IPR010920 LSM domain SDY_3027 de932e898f4776101ae5b563fce85d5a 76 Pfam PF06004 Bacterial protein of unknown function (DUF903) 25 73 2.1E-25 T 21-04-2016 IPR010305 Protein of unknown function DUF903 SDY_3027 de932e898f4776101ae5b563fce85d5a 76 PANTHER PTHR37011:SF2 2 76 1.1E-43 T 21-04-2016 SDY_2206 6b5967664770f92f13db0348a287525e 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 2.8E-164 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_2206 6b5967664770f92f13db0348a287525e 292 Pfam PF00483 Nucleotidyl transferase 5 241 7.2E-74 T 21-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SDY_2206 6b5967664770f92f13db0348a287525e 292 Gene3D G3DSA:3.90.550.10 4 268 2.2E-70 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2206 6b5967664770f92f13db0348a287525e 292 SUPERFAMILY SSF53448 4 289 3.52E-97 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2206 6b5967664770f92f13db0348a287525e 292 PANTHER PTHR22572 5 269 1.5E-196 T 21-04-2016 SDY_2206 6b5967664770f92f13db0348a287525e 292 PANTHER PTHR22572:SF105 5 269 1.5E-196 T 21-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 Gene3D G3DSA:3.90.950.10 1 195 1.8E-82 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 9.7E-71 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 SUPERFAMILY SSF52972 1 195 6.02E-74 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 Pfam PF01725 Ham1 family 4 191 1.7E-54 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 PANTHER PTHR11067:SF9 1 196 2.0E-86 T 21-04-2016 SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 PANTHER PTHR11067 1 196 2.0E-86 T 21-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SDY_3118 00ed0025de50318e32325850d2ed1c7b 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.52 T 21-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SDY_3390 a9f70f9de9dc693615186caed90e6fd8 220 PANTHER PTHR10224 1 220 9.8E-129 T 21-04-2016 SDY_3390 a9f70f9de9dc693615186caed90e6fd8 220 PIRSF PIRSF006320 4 219 2.3E-106 T 21-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 SDY_3390 a9f70f9de9dc693615186caed90e6fd8 220 Gene3D G3DSA:3.40.50.880 3 219 1.4E-102 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_3390 a9f70f9de9dc693615186caed90e6fd8 220 SUPERFAMILY SSF52317 4 219 4.03E-65 T 21-04-2016 IPR029062 Class I glutamine amidotransferase-like SDY_1309 d7217038aea50da2137273796bbcffbf 98 Gene3D G3DSA:3.30.70.1060 2 98 1.0E-37 T 21-04-2016 SDY_1309 d7217038aea50da2137273796bbcffbf 98 Pfam PF03795 YCII-related domain 2 95 7.3E-29 T 21-04-2016 IPR005545 YCII-related SDY_1309 d7217038aea50da2137273796bbcffbf 98 PANTHER PTHR33606 1 98 8.9E-32 T 21-04-2016 SDY_1309 d7217038aea50da2137273796bbcffbf 98 SUPERFAMILY SSF54909 2 98 2.15E-31 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_3581 c413f32a80fa622de500579019869dc2 431 PANTHER PTHR32039 121 226 2.1E-20 T 21-04-2016 SDY_3581 c413f32a80fa622de500579019869dc2 431 PANTHER PTHR32039:SF8 121 226 2.1E-20 T 21-04-2016 SDY_3581 c413f32a80fa622de500579019869dc2 431 SUPERFAMILY SSF102405 129 321 2.59E-28 T 21-04-2016 SDY_3581 c413f32a80fa622de500579019869dc2 431 Pfam PF02481 DNA recombination-mediator protein A 120 323 3.4E-46 T 21-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SDY_3581 c413f32a80fa622de500579019869dc2 431 Gene3D G3DSA:3.40.50.450 166 312 9.2E-16 T 21-04-2016 SDY_4075 f01e1b4943e769f1a260ccfaa207024f 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.3E-138 T 21-04-2016 IPR005229 Conserved hypothetical protein CHP00255 SDY_4075 f01e1b4943e769f1a260ccfaa207024f 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.0E-34 T 21-04-2016 IPR013551 Domain of unknown function DUF1732 SDY_4075 f01e1b4943e769f1a260ccfaa207024f 287 PANTHER PTHR30636 1 287 6.6E-113 T 21-04-2016 SDY_4075 f01e1b4943e769f1a260ccfaa207024f 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.5E-43 T 21-04-2016 IPR013527 YicC-like, N-terminal SDY_2190 4b797e683230c6c5b8384747b4057545 219 Pfam PF00092 von Willebrand factor type A domain 24 173 2.4E-10 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_2190 4b797e683230c6c5b8384747b4057545 219 SUPERFAMILY SSF53300 22 174 2.37E-19 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_2190 4b797e683230c6c5b8384747b4057545 219 SMART SM00327 19 193 1.1E-17 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_2190 4b797e683230c6c5b8384747b4057545 219 Gene3D G3DSA:3.40.50.410 23 173 4.1E-11 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_2190 4b797e683230c6c5b8384747b4057545 219 PIRSF PIRSF020634 17 219 3.5E-95 T 21-04-2016 IPR011392 Tellurite resistance, TerY SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 4.9E-106 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 PANTHER PTHR10108 305 372 2.2E-113 T 21-04-2016 SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 PANTHER PTHR10108 45 289 2.2E-113 T 21-04-2016 SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 PIRSF PIRSF003085 2 381 4.1E-130 T 21-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 PANTHER PTHR10108:SF795 305 372 2.2E-113 T 21-04-2016 SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 PANTHER PTHR10108:SF795 45 289 2.2E-113 T 21-04-2016 SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 SUPERFAMILY SSF53335 117 373 6.1E-79 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1887 d1e021196bc7811d693f3a45e9372e4d 382 Gene3D G3DSA:3.40.50.150 117 371 1.0E-95 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1529 9dfffbd6f87a26254536cf72a1f41d96 99 Pfam PF03811 InsA N-terminal domain 2 36 2.7E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1529 9dfffbd6f87a26254536cf72a1f41d96 99 PANTHER PTHR33293 2 92 1.8E-32 T 21-04-2016 SDY_1529 9dfffbd6f87a26254536cf72a1f41d96 99 Pfam PF12759 InsA C-terminal domain 43 87 3.5E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0904 f49f9ea811d89e701c0cc9d9a464363a 188 Gene3D G3DSA:3.90.1720.10 68 186 7.4E-46 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0904 f49f9ea811d89e701c0cc9d9a464363a 188 Pfam PF00877 NlpC/P60 family 79 183 2.0E-34 T 21-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_0904 f49f9ea811d89e701c0cc9d9a464363a 188 PANTHER PTHR21666 7 187 5.3E-91 T 21-04-2016 SDY_0904 f49f9ea811d89e701c0cc9d9a464363a 188 PANTHER PTHR21666:SF210 7 187 5.3E-91 T 21-04-2016 SDY_0904 f49f9ea811d89e701c0cc9d9a464363a 188 SUPERFAMILY SSF54001 67 185 1.86E-41 T 21-04-2016 SDY_2080 d1a912e97e1e325a901d5038172dba13 219 SMART SM00858 95 157 5.2E-4 T 21-04-2016 IPR013974 SAF domain SDY_2080 d1a912e97e1e325a901d5038172dba13 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 47 215 8.9E-34 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SDY_2080 d1a912e97e1e325a901d5038172dba13 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 1.1E-33 T 21-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SDY_2080 d1a912e97e1e325a901d5038172dba13 219 PANTHER PTHR36307 1 218 9.2E-45 T 21-04-2016 SDY_1483 a49de2cf43cb3067e625917293ee2434 292 SUPERFAMILY SSF103473 14 262 3.27E-24 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1483 a49de2cf43cb3067e625917293ee2434 292 PANTHER PTHR23514 13 282 3.6E-137 T 21-04-2016 SDY_1483 a49de2cf43cb3067e625917293ee2434 292 PANTHER PTHR23514:SF1 13 282 3.6E-137 T 21-04-2016 SDY_1483 a49de2cf43cb3067e625917293ee2434 292 Pfam PF07690 Major Facilitator Superfamily 15 221 1.0E-12 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1483 a49de2cf43cb3067e625917293ee2434 292 Gene3D G3DSA:1.20.1250.20 84 263 1.8E-13 T 21-04-2016 SDY_3997 6138cc3e0352736ff6c34dc089325b31 321 PANTHER PTHR32196 9 321 7.3E-141 T 21-04-2016 SDY_3997 6138cc3e0352736ff6c34dc089325b31 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 2.2E-50 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_3997 6138cc3e0352736ff6c34dc089325b31 321 PANTHER PTHR32196:SF21 9 321 7.3E-141 T 21-04-2016 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 Gene3D G3DSA:3.30.1370.60 76 280 3.6E-81 T 21-04-2016 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 PANTHER PTHR11091:SF2 1 356 2.3E-258 T 21-04-2016 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 Gene3D G3DSA:1.10.1530.10 6 75 1.4E-21 T 21-04-2016 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 1.7E-113 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 Gene3D G3DSA:1.20.5.460 282 309 1.4E-21 T 21-04-2016 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 PANTHER PTHR11091 1 356 2.3E-258 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_0798 edfee08fc13d7c15a5060e9997441c50 361 SUPERFAMILY SSF89733 6 349 9.42E-107 T 21-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 SDY_4336 f1db16899a2c210ccf4b22d4df7b9d09 104 PANTHER PTHR30036:SF1 1 103 1.0E-52 T 21-04-2016 SDY_4336 f1db16899a2c210ccf4b22d4df7b9d09 104 PANTHER PTHR30036 1 103 1.0E-52 T 21-04-2016 SDY_4336 f1db16899a2c210ccf4b22d4df7b9d09 104 Pfam PF13407 Periplasmic binding protein domain 2 103 3.6E-22 T 21-04-2016 IPR025997 Periplasmic binding protein SDY_4336 f1db16899a2c210ccf4b22d4df7b9d09 104 Gene3D G3DSA:3.40.50.2300 2 103 8.8E-29 T 21-04-2016 SDY_4336 f1db16899a2c210ccf4b22d4df7b9d09 104 SUPERFAMILY SSF53822 2 103 1.3E-23 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 Gene3D G3DSA:3.30.360.10 130 339 1.5E-30 T 21-04-2016 SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.1E-18 T 21-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 Gene3D G3DSA:3.40.50.720 1 129 5.0E-41 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 PANTHER PTHR22604 1 343 1.8E-143 T 21-04-2016 SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 PANTHER PTHR22604:SF53 1 343 1.8E-143 T 21-04-2016 SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.7E-24 T 21-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SDY_1847 711eb4e8957e413a72d3776dc58d2e41 346 SUPERFAMILY SSF51735 2 192 1.08E-49 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_4246 687545f3d0199d364c06d9db700d7bac 125 Pfam PF03400 IS1 transposase 1 125 6.2E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4246 687545f3d0199d364c06d9db700d7bac 125 PANTHER PTHR33293 1 124 1.5E-42 T 21-04-2016 SDY_2702 990de095326f6804dc3e485f0f4ce174 179 ProDom PD095266 MEMBRANE YFGI EXPORTED 1 179 3.0E-80 T 21-04-2016 IPR020231 Uncharacterised protein family, YfgI SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 Pfam PF01432 Peptidase family M3 230 678 1.4E-145 T 21-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 PANTHER PTHR11804:SF47 1 679 0.0 T 21-04-2016 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 SUPERFAMILY SSF55486 5 679 4.95E-170 T 21-04-2016 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 PANTHER PTHR11804 1 679 0.0 T 21-04-2016 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 Gene3D G3DSA:1.10.1370.10 505 679 1.2E-108 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 Gene3D G3DSA:1.10.1370.10 146 352 1.2E-108 T 21-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 Gene3D G3DSA:1.20.1050.40 12 143 3.4E-17 T 21-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SDY_1587 89d50341d35e857b0797c6cacc9f1e23 681 Gene3D G3DSA:3.40.390.10 362 504 2.8E-51 T 21-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 SUPERFAMILY SSF51197 4 177 3.41E-8 T 21-04-2016 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 PANTHER PTHR41536 2 225 2.5E-136 T 21-04-2016 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 45.712 T 21-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 SMART SM00702 1 176 1.4E-32 T 21-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 6.8E-15 T 21-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SDY_0795 ca06a8f9c920930674910bd027a6b3af 225 PANTHER PTHR41536:SF1 2 225 2.5E-136 T 21-04-2016 SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 1.2E-48 T 21-04-2016 SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 PANTHER PTHR10371 10 166 1.9E-119 T 21-04-2016 SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 SUPERFAMILY SSF52833 15 165 7.16E-49 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 PIRSF PIRSF000216 1 166 3.3E-51 T 21-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 Gene3D G3DSA:3.40.30.10 86 164 7.7E-9 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 6.1E-51 T 21-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 SDY_2481 ac1b83e072494758dbda78f63f0c8f26 166 PANTHER PTHR10371:SF7 10 166 1.9E-119 T 21-04-2016 SDY_0881 c75bff5d958d3809695d48d596226a11 159 PANTHER PTHR34128 1 159 2.7E-79 T 21-04-2016 SDY_0881 c75bff5d958d3809695d48d596226a11 159 Pfam PF03100 CcmE 4 137 5.3E-46 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SDY_0881 c75bff5d958d3809695d48d596226a11 159 PANTHER PTHR34128:SF1 1 159 2.7E-79 T 21-04-2016 SDY_0881 c75bff5d958d3809695d48d596226a11 159 Gene3D G3DSA:2.40.50.140 26 131 3.2E-42 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_0881 c75bff5d958d3809695d48d596226a11 159 SUPERFAMILY SSF82093 30 143 4.45E-41 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SDY_0881 c75bff5d958d3809695d48d596226a11 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.978 T 21-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 SUPERFAMILY SSF51161 38 165 6.52E-25 T 21-04-2016 IPR011004 Trimeric LpxA-like SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 Gene3D G3DSA:2.160.10.10 37 167 5.4E-23 T 21-04-2016 SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 PANTHER PTHR23416 33 165 2.2E-19 T 21-04-2016 SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 PIRSF PIRSF000441 5 180 3.1E-30 T 21-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 1.5E-6 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_0749 a61bb19e47c919a1e9845266b9eb7063 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 113 1.4E-7 T 21-04-2016 IPR001451 Hexapeptide repeat SDY_2502 9180682cd7221df4f8380bc220207370 206 PANTHER PTHR34611 1 206 1.4E-149 T 21-04-2016 SDY_2502 9180682cd7221df4f8380bc220207370 206 Pfam PF04754 Putative transposase, YhgA-like 1 119 5.0E-44 T 21-04-2016 IPR006842 Transposase (putative), YhgA-like SDY_2502 9180682cd7221df4f8380bc220207370 206 PANTHER PTHR34611:SF2 1 206 1.4E-149 T 21-04-2016 SDY_2502 9180682cd7221df4f8380bc220207370 206 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 1 201 3.0E-30 T 21-04-2016 IPR010106 Conserved hypothetical protein CHP01784 SDY_3153 1e4df7ccdb5a357c65d712de75944374 192 Pfam PF12822 Protein of unknown function (DUF3816) 10 173 2.8E-10 T 21-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SDY_1551 178bd59e4db9f686a6bf537347b3f52c 462 PIRSF PIRSF000204 1 462 5.6E-239 T 21-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SDY_1551 178bd59e4db9f686a6bf537347b3f52c 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.9E-200 T 21-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 SDY_1551 178bd59e4db9f686a6bf537347b3f52c 462 SUPERFAMILY SSF52467 289 462 1.54E-78 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_1551 178bd59e4db9f686a6bf537347b3f52c 462 PANTHER PTHR10160 4 462 1.2E-255 T 21-04-2016 SDY_1551 178bd59e4db9f686a6bf537347b3f52c 462 Gene3D G3DSA:3.40.50.1220 288 462 1.6E-92 T 21-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SDY_3887 45589e0d6140d039b9ea5e4c18478b35 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-44 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 SDY_3887 45589e0d6140d039b9ea5e4c18478b35 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.1E-46 T 21-04-2016 IPR009383 Protein of unknown function DUF1040 SDY_2631 34f9b14b57e8c52b15887e5076856801 151 Pfam PF11143 Protein of unknown function (DUF2919) 8 147 4.3E-48 T 21-04-2016 IPR021318 Protein of unknown function DUF2919 SDY_4003 fc1d06becc73a191078b4f68e72e50c8 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 59.794 T 21-04-2016 IPR023481 Uncharacterised protein family ViaA SDY_4003 fc1d06becc73a191078b4f68e72e50c8 483 PANTHER PTHR36846 1 483 7.7E-140 T 21-04-2016 SDY_4003 fc1d06becc73a191078b4f68e72e50c8 483 SMART SM00327 319 483 1.2E-12 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_4003 fc1d06becc73a191078b4f68e72e50c8 483 Pfam PF05762 VWA domain containing CoxE-like protein 307 458 2.2E-10 T 21-04-2016 IPR008912 Uncharacterised protein family CoxE-like SDY_4003 fc1d06becc73a191078b4f68e72e50c8 483 SUPERFAMILY SSF53300 318 459 8.39E-19 T 21-04-2016 IPR002035 von Willebrand factor, type A SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 Pfam PF00892 EamA-like transporter family 9 142 6.5E-14 T 21-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 SUPERFAMILY SSF103481 42 145 8.5E-14 T 21-04-2016 SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 TIGRFAM TIGR00688 rarD: protein RarD 8 262 6.3E-117 T 21-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 SUPERFAMILY SSF103481 189 286 4.32E-7 T 21-04-2016 SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 PANTHER PTHR22911:SF41 1 297 7.9E-160 T 21-04-2016 SDY_3924 fb8c1fb730ecf5acc0a24d39d6dfe1d8 297 PANTHER PTHR22911 1 297 7.9E-160 T 21-04-2016 SDY_3937 ec15058678416443f9ec02df74fd66f6 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 6.1E-9 T 21-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site SDY_2303 48aebb1f8fc9661f78bc1773837e3da2 385 PANTHER PTHR36927 1 380 1.6E-72 T 21-04-2016 SDY_2303 48aebb1f8fc9661f78bc1773837e3da2 385 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 385 55.264 T 21-04-2016 IPR023723 Glucan biosynthesis protein C GO:0016741 UniPathway: UPA00637 SDY_2303 48aebb1f8fc9661f78bc1773837e3da2 385 Pfam PF01757 Acyltransferase family 10 356 6.4E-42 T 21-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 SUPERFAMILY SSF55729 1 128 7.69E-30 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 PANTHER PTHR23091:SF274 1 129 9.7E-28 T 21-04-2016 SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 46.559 T 21-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 PANTHER PTHR23091 1 129 9.7E-28 T 21-04-2016 SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 7.0E-16 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_2632 bf7c0211457e35636f6dcd70efc4157e 141 Gene3D G3DSA:3.40.630.30 1 123 8.0E-35 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_0951 af3fcc06ee1db804b84635e552356985 132 Gene3D G3DSA:3.40.30.10 19 101 1.1E-31 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_0951 af3fcc06ee1db804b84635e552356985 132 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 116 7.4E-43 T 21-04-2016 IPR010893 [NiFe]-hydrogenase maturation factor HyaE SDY_0951 af3fcc06ee1db804b84635e552356985 132 SUPERFAMILY SSF52833 5 130 1.79E-24 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_1811 18de15d178b630a380cdd2a857657820 118 Pfam PF00453 Ribosomal protein L20 3 109 4.7E-49 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.5E-53 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.018 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 SUPERFAMILY SSF74731 3 117 3.01E-50 T 21-04-2016 SDY_1811 18de15d178b630a380cdd2a857657820 118 PANTHER PTHR10986 2 117 5.8E-68 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_1811 18de15d178b630a380cdd2a857657820 118 Gene3D G3DSA:1.10.1900.20 55 117 3.7E-31 T 21-04-2016 SDY_1811 18de15d178b630a380cdd2a857657820 118 PANTHER PTHR10986:SF12 2 117 5.8E-68 T 21-04-2016 SDY_1811 18de15d178b630a380cdd2a857657820 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 21-04-2016 SDY_1811 18de15d178b630a380cdd2a857657820 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 21-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SDY_4529 93fa29eb4f4d25c14ab2ab5e3612a356 69 PIRSF PIRSF039008 1 66 3.3E-31 T 21-04-2016 IPR026042 Stress response protein YjbJ SDY_4529 93fa29eb4f4d25c14ab2ab5e3612a356 69 Gene3D G3DSA:1.10.1470.10 1 67 1.1E-31 T 21-04-2016 IPR008462 CsbD-like SDY_4529 93fa29eb4f4d25c14ab2ab5e3612a356 69 SUPERFAMILY SSF69047 1 69 9.29E-27 T 21-04-2016 IPR008462 CsbD-like SDY_4529 93fa29eb4f4d25c14ab2ab5e3612a356 69 Pfam PF05532 CsbD-like 4 56 8.0E-22 T 21-04-2016 IPR008462 CsbD-like SDY_4529 93fa29eb4f4d25c14ab2ab5e3612a356 69 PANTHER PTHR34977 1 69 4.1E-18 T 21-04-2016 SDY_0754 31f620c970dd905cbf1ff2e03fc88937 91 Gene3D G3DSA:1.10.10.60 53 86 4.1E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0754 31f620c970dd905cbf1ff2e03fc88937 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0754 31f620c970dd905cbf1ff2e03fc88937 91 PANTHER PTHR33293 2 91 8.0E-33 T 21-04-2016 SDY_0754 31f620c970dd905cbf1ff2e03fc88937 91 SUPERFAMILY SSF46689 52 86 6.45E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0754 31f620c970dd905cbf1ff2e03fc88937 91 Pfam PF12759 InsA C-terminal domain 43 88 1.8E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0729 7486bb8dead214bca29307569f942762 301 Pfam PF13276 HTH-like domain 62 104 3.8E-11 T 21-04-2016 IPR025948 HTH-like domain SDY_0729 7486bb8dead214bca29307569f942762 301 Pfam PF00665 Integrase core domain 124 243 1.3E-23 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0729 7486bb8dead214bca29307569f942762 301 Gene3D G3DSA:3.30.420.10 119 282 9.3E-33 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0729 7486bb8dead214bca29307569f942762 301 SUPERFAMILY SSF53098 121 292 3.04E-29 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0775 04119415431c971cfadf2f1c1a0f9520 419 PANTHER PTHR30613:SF4 2 419 1.5E-291 T 21-04-2016 SDY_0775 04119415431c971cfadf2f1c1a0f9520 419 SUPERFAMILY SSF51197 3 417 3.94E-151 T 21-04-2016 SDY_0775 04119415431c971cfadf2f1c1a0f9520 419 Pfam PF07350 Protein of unknown function (DUF1479) 13 417 6.2E-141 T 21-04-2016 IPR010856 Protein of unknown function DUF1479 SDY_0775 04119415431c971cfadf2f1c1a0f9520 419 Gene3D G3DSA:2.60.120.330 3 418 3.0E-159 T 21-04-2016 IPR027443 Isopenicillin N synthase-like SDY_0775 04119415431c971cfadf2f1c1a0f9520 419 PANTHER PTHR30613 2 419 1.5E-291 T 21-04-2016 SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 PANTHER PTHR10204 6 177 1.3E-78 T 21-04-2016 SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 Gene3D G3DSA:3.40.50.360 7 177 2.2E-43 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 PANTHER PTHR10204:SF42 6 177 1.3E-78 T 21-04-2016 SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 SUPERFAMILY SSF52218 6 177 5.35E-44 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 Pfam PF02525 Flavodoxin-like fold 7 172 1.2E-37 T 21-04-2016 IPR003680 Flavodoxin-like fold SDY_3513 8ba11a5f46b7dd04236a89dce69f3ab9 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 47.564 T 21-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SDY_0635 6c5a711ba684b1984664e98a5dcacbc4 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 4.1E-34 T 21-04-2016 IPR019663 Uncharacterised protein YbfA SDY_0357 2990862072e39b1733ed4503093023ad 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.325 T 21-04-2016 IPR003791 Protein of unknown function UPF0178 SDY_0357 2990862072e39b1733ed4503093023ad 152 PANTHER PTHR35146 1 152 6.9E-62 T 21-04-2016 SDY_0357 2990862072e39b1733ed4503093023ad 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 7.7E-49 T 21-04-2016 IPR003791 Protein of unknown function UPF0178 SDY_0357 2990862072e39b1733ed4503093023ad 152 PANTHER PTHR35146:SF1 1 152 6.9E-62 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PANTHER PTHR33308 14 294 1.7E-49 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 SMART SM00047 142 306 1.9E-73 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 Pfam PF10135 Rod binding protein 50 97 9.8E-18 T 21-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 295 7.3E-132 T 21-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 4.1E-180 T 21-04-2016 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.3E-20 T 21-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SDY_2070 a4295dc85ac4a6880ab42788f3d6ceff 313 PANTHER PTHR33308:SF3 14 294 1.7E-49 T 21-04-2016 SDY_1472 e534f8ce70036b2497aa9881b2921981 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 94 4.3E-10 T 21-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SDY_3983 89bec4a6b3410336c2920315114014f3 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 4.6E-21 T 21-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SDY_3983 89bec4a6b3410336c2920315114014f3 398 PANTHER PTHR33055:SF3 10 209 3.0E-77 T 21-04-2016 SDY_3983 89bec4a6b3410336c2920315114014f3 398 PANTHER PTHR33055:SF3 257 393 3.0E-77 T 21-04-2016 SDY_3983 89bec4a6b3410336c2920315114014f3 398 PANTHER PTHR33055 10 209 3.0E-77 T 21-04-2016 SDY_3983 89bec4a6b3410336c2920315114014f3 398 PANTHER PTHR33055 257 393 3.0E-77 T 21-04-2016 SDY_3983 89bec4a6b3410336c2920315114014f3 398 Pfam PF01548 Transposase 14 168 1.9E-43 T 21-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SDY_2028 0f1af7bfbea6b1d71fac9e9865baab0b 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 6.5E-20 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2028 0f1af7bfbea6b1d71fac9e9865baab0b 264 Gene3D G3DSA:1.10.3720.10 5 256 8.2E-56 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2028 0f1af7bfbea6b1d71fac9e9865baab0b 264 PANTHER PTHR30222 1 259 6.9E-168 T 21-04-2016 SDY_2028 0f1af7bfbea6b1d71fac9e9865baab0b 264 PANTHER PTHR30222:SF6 1 259 6.9E-168 T 21-04-2016 SDY_2028 0f1af7bfbea6b1d71fac9e9865baab0b 264 SUPERFAMILY SSF161098 3 254 8.97E-56 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_4658 d95d12290aaa87a91f47d25299cfb6ce 157 Pfam PF05981 CreA protein 24 155 3.3E-58 T 21-04-2016 IPR010292 Uncharacterised protein family CreA SDY_4658 d95d12290aaa87a91f47d25299cfb6ce 157 PANTHER PTHR37952:SF2 1 156 6.2E-92 T 21-04-2016 SDY_4658 d95d12290aaa87a91f47d25299cfb6ce 157 PIRSF PIRSF003174 1 157 9.7E-70 T 21-04-2016 IPR010292 Uncharacterised protein family CreA SDY_4658 d95d12290aaa87a91f47d25299cfb6ce 157 PANTHER PTHR37952 1 156 6.2E-92 T 21-04-2016 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 PANTHER PTHR21110:SF0 235 403 3.0E-116 T 21-04-2016 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 PANTHER PTHR21110:SF0 2 212 3.0E-116 T 21-04-2016 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 Pfam PF01676 Metalloenzyme superfamily 3 388 4.8E-50 T 21-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 Gene3D G3DSA:3.40.720.10 2 100 1.6E-60 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 Gene3D G3DSA:3.40.720.10 233 401 1.6E-60 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 PANTHER PTHR21110 235 403 3.0E-116 T 21-04-2016 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 PANTHER PTHR21110 2 212 3.0E-116 T 21-04-2016 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 SUPERFAMILY SSF53649 3 100 5.23E-56 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 SUPERFAMILY SSF53649 230 401 5.23E-56 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_3701 9f95064cb13511d5e37efc0abdd1e29e 408 PIRSF PIRSF001491 1 402 2.2E-116 T 21-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SDY_3972a 304cd097732ead42f4419a517a89bcf7 103 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 96 3.8E-20 T 21-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 Gene3D G3DSA:3.90.230.10 161 439 4.2E-55 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 21-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 Pfam PF00557 Metallopeptidase family M24 168 430 2.1E-46 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.362 T 21-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 PANTHER PTHR10804:SF101 1 440 1.4E-270 T 21-04-2016 SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 SUPERFAMILY SSF55920 163 438 1.83E-56 T 21-04-2016 IPR000994 Peptidase M24, structural domain SDY_3898 03861c4bfbb16ddbd8d343c22e16621d 443 PANTHER PTHR10804 1 440 1.4E-270 T 21-04-2016 SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 PANTHER PTHR39573 2 328 2.3E-197 T 21-04-2016 SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 Gene3D G3DSA:3.90.1200.10 106 325 3.7E-46 T 21-04-2016 SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 SUPERFAMILY SSF56112 6 327 4.08E-92 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.89 T 21-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 PANTHER PTHR39573:SF1 2 328 2.3E-197 T 21-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SDY_3886 714c878f8853cbee421e92ca234e4a9d 328 Pfam PF01636 Phosphotransferase enzyme family 32 259 1.5E-43 T 21-04-2016 IPR002575 Aminoglycoside phosphotransferase SDY_2188 2bdb800459aa140d554d381309dadee5 348 Gene3D G3DSA:1.20.1250.20 100 261 1.3E-11 T 21-04-2016 SDY_2188 2bdb800459aa140d554d381309dadee5 348 Pfam PF07690 Major Facilitator Superfamily 2 248 2.9E-13 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2188 2bdb800459aa140d554d381309dadee5 348 PANTHER PTHR23501 1 271 2.8E-196 T 21-04-2016 SDY_2188 2bdb800459aa140d554d381309dadee5 348 SUPERFAMILY SSF103473 2 37 4.19E-21 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2188 2bdb800459aa140d554d381309dadee5 348 SUPERFAMILY SSF103473 87 263 4.19E-21 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2188 2bdb800459aa140d554d381309dadee5 348 PANTHER PTHR23501:SF36 1 271 2.8E-196 T 21-04-2016 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 PANTHER PTHR38042 1 246 7.2E-90 T 21-04-2016 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 SUPERFAMILY SSF69618 1 245 2.22E-53 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 Gene3D G3DSA:3.40.50.10090 147 245 6.5E-8 T 21-04-2016 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 PANTHER PTHR38042:SF1 1 246 7.2E-90 T 21-04-2016 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 Gene3D G3DSA:3.40.50.10090 29 146 3.1E-13 T 21-04-2016 SDY_3942 a3e65914904f81172b33b2a95f28be93 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 6.7E-40 T 21-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 SUPERFAMILY SSF75169 1 95 8.24E-32 T 21-04-2016 IPR027396 DsrEFH-like SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 3.3E-33 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 Gene3D G3DSA:3.40.1260.10 1 94 1.9E-34 T 21-04-2016 IPR027396 DsrEFH-like SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 Pfam PF04077 DsrH like protein 7 91 2.4E-29 T 21-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 PANTHER PTHR37526 1 95 2.2E-36 T 21-04-2016 SDY_3504 0fd58916071e6f5411ef3d0bf6ac33d0 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 30.581 T 21-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 SDY_1086 a37476dead4606ea62aafbe7f4ae4029 401 PANTHER PTHR30574:SF6 1 344 2.7E-256 T 21-04-2016 SDY_1086 a37476dead4606ea62aafbe7f4ae4029 401 Pfam PF04143 Sulphur transport 3 160 7.7E-25 T 21-04-2016 IPR007272 Sulphur transport domain SDY_1086 a37476dead4606ea62aafbe7f4ae4029 401 Pfam PF04143 Sulphur transport 237 387 7.7E-24 T 21-04-2016 IPR007272 Sulphur transport domain SDY_1086 a37476dead4606ea62aafbe7f4ae4029 401 PANTHER PTHR30574 1 344 2.7E-256 T 21-04-2016 SDY_3421 d2af90ca0d5cfe7e3213840d1c9cd793 1266 Pfam PF13502 AsmA-like C-terminal region 1009 1252 2.9E-68 T 21-04-2016 IPR032712 AsmA-like, C-terminal SDY_3421 d2af90ca0d5cfe7e3213840d1c9cd793 1266 PANTHER PTHR38690 1 1266 0.0 T 21-04-2016 SDY_3421 d2af90ca0d5cfe7e3213840d1c9cd793 1266 Pfam PF13116 Protein of unknown function 505 789 1.0E-96 T 21-04-2016 IPR025263 Domain of unknown function DUF3971 SDY_3421 d2af90ca0d5cfe7e3213840d1c9cd793 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 21-04-2016 IPR011836 Conserved hypothetical protein CHP02099 SDY_3423 75913a660766f8ff70914a764a4f58a2 197 Gene3D G3DSA:3.90.950.10 2 185 6.5E-72 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_3423 75913a660766f8ff70914a764a4f58a2 197 PANTHER PTHR11746 119 187 1.3E-19 T 21-04-2016 SDY_3423 75913a660766f8ff70914a764a4f58a2 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.793 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 SDY_3423 75913a660766f8ff70914a764a4f58a2 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.9E-75 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 SDY_3423 75913a660766f8ff70914a764a4f58a2 197 SUPERFAMILY SSF52972 2 184 6.28E-64 T 21-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SDY_3423 75913a660766f8ff70914a764a4f58a2 197 Pfam PF02545 Maf-like protein 4 184 1.8E-59 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 SDY_3423 75913a660766f8ff70914a764a4f58a2 197 PIRSF PIRSF006305 1 191 2.2E-57 T 21-04-2016 IPR003697 Maf-like protein GO:0005737 SDY_1084 c05c3569b6c81350c12f8da7bbb66495 223 PANTHER PTHR13604 2 222 2.6E-67 T 21-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1084 c05c3569b6c81350c12f8da7bbb66495 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 1.1E-48 T 21-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1084 c05c3569b6c81350c12f8da7bbb66495 223 SUPERFAMILY SSF143081 2 222 1.22E-59 T 21-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1084 c05c3569b6c81350c12f8da7bbb66495 223 Gene3D G3DSA:3.90.1680.10 1 222 2.2E-65 T 21-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_1434 ae73b7fa33c0a12c27c83404e1dcc87d 349 SMART SM00507 266 315 7.3E-4 T 21-04-2016 IPR003615 HNH nuclease SDY_1434 ae73b7fa33c0a12c27c83404e1dcc87d 349 Pfam PF06147 Protein of unknown function (DUF968) 131 345 9.0E-75 T 21-04-2016 IPR010373 Protein of unknown function DUF968 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 Gene3D G3DSA:3.30.70.20 27 117 9.5E-19 T 21-04-2016 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 PANTHER PTHR10849 8 180 4.3E-83 T 21-04-2016 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 SUPERFAMILY SSF54862 33 153 6.7E-29 T 21-04-2016 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 9.8E-52 T 21-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.841 T 21-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.8E-11 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_2477 aa6ef7f03a5cc02276375b230c8bf00f 180 PANTHER PTHR10849:SF13 8 180 4.3E-83 T 21-04-2016 SDY_2475 26e88bb20aa45666ba298fd045b8a027 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.378 T 21-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SDY_2475 26e88bb20aa45666ba298fd045b8a027 100 PANTHER PTHR11434:SF4 3 100 1.3E-65 T 21-04-2016 SDY_2475 26e88bb20aa45666ba298fd045b8a027 100 PANTHER PTHR11434 3 100 1.3E-65 T 21-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SDY_2475 26e88bb20aa45666ba298fd045b8a027 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 5.0E-21 T 21-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SDY_4560 f0b74244cc50c51ca8bc36c879d23ae7 65 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 31 65 4.9E-26 T 21-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr SDY_3610 f76239f737884d8699b300f833348efe 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 3.4E-50 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_3610 f76239f737884d8699b300f833348efe 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 33.334 T 21-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 SDY_3610 f76239f737884d8699b300f833348efe 127 Gene3D G3DSA:3.40.630.30 28 88 3.6E-7 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_3610 f76239f737884d8699b300f833348efe 127 SUPERFAMILY SSF55729 9 120 5.15E-9 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1576 78baa743e6e6e0c5359dc8ff3ab9a06c 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 2.0E-53 T 21-04-2016 IPR009700 Protein of unknown function DUF1283 SDY_1576 78baa743e6e6e0c5359dc8ff3ab9a06c 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 28.97 T 21-04-2016 IPR009700 Protein of unknown function DUF1283 SDY_1576 78baa743e6e6e0c5359dc8ff3ab9a06c 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 2.9E-41 T 21-04-2016 IPR009700 Protein of unknown function DUF1283 SDY_2237 0dbe6f04c85a8bd532e8fcc6dacd8675 131 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 30 124 25.636 T 21-04-2016 IPR007458 Protein of unknown function DUF496 SDY_2237 0dbe6f04c85a8bd532e8fcc6dacd8675 131 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 33 120 1.0E-43 T 21-04-2016 IPR007458 Protein of unknown function DUF496 SDY_2237 0dbe6f04c85a8bd532e8fcc6dacd8675 131 Pfam PF04363 Protein of unknown function (DUF496) 30 121 5.3E-46 T 21-04-2016 IPR007458 Protein of unknown function DUF496 SDY_2237 0dbe6f04c85a8bd532e8fcc6dacd8675 131 PANTHER PTHR39591 23 131 3.9E-61 T 21-04-2016 SDY_2237 0dbe6f04c85a8bd532e8fcc6dacd8675 131 PIRSF PIRSF028773 23 131 1.8E-53 T 21-04-2016 IPR007458 Protein of unknown function DUF496 SDY_1575 ce3a03aebe6b4f4891b94508460703b7 132 PANTHER PTHR13256:SF21 1 131 7.2E-54 T 21-04-2016 SDY_1575 ce3a03aebe6b4f4891b94508460703b7 132 Pfam PF13302 Acetyltransferase (GNAT) domain 8 131 1.0E-15 T 21-04-2016 IPR000182 GNAT domain GO:0008080 SDY_1575 ce3a03aebe6b4f4891b94508460703b7 132 Gene3D G3DSA:3.40.630.30 6 131 3.7E-29 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1575 ce3a03aebe6b4f4891b94508460703b7 132 SUPERFAMILY SSF55729 6 131 1.92E-27 T 21-04-2016 IPR016181 Acyl-CoA N-acyltransferase SDY_1575 ce3a03aebe6b4f4891b94508460703b7 132 PANTHER PTHR13256 1 131 7.2E-54 T 21-04-2016 SDY_0634 847c97dbdbeb569f4a622edffac3e53e 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 2.8E-8 T 21-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 SDY_0634 847c97dbdbeb569f4a622edffac3e53e 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.3E-5 T 21-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PANTHER PTHR24321 2 255 3.0E-69 T 21-04-2016 SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PANTHER PTHR24321:SF6 2 255 3.0E-69 T 21-04-2016 SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 7.5E-71 T 21-04-2016 SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.3E-44 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 Gene3D G3DSA:3.40.50.720 1 254 3.3E-90 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 2.4E-4 T 21-04-2016 SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 SUPERFAMILY SSF51735 6 255 3.71E-85 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.9E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_2622 5e7e27121d9fd432b8db57d60af83bfa 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-13 T 21-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SDY_1012 3a552082ab41f859fb55bb195b1a7713 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 5.9E-36 T 21-04-2016 IPR009329 Protein of unknown function DUF987 SDY_1012 3a552082ab41f859fb55bb195b1a7713 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 4.0E-33 T 21-04-2016 IPR009329 Protein of unknown function DUF987 SDY_0727 ee7a625387fed73feccc182a4ae0417f 277 Pfam PF00665 Integrase core domain 72 186 6.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0727 ee7a625387fed73feccc182a4ae0417f 277 PANTHER PTHR32552 2 235 5.5E-61 T 21-04-2016 SDY_0727 ee7a625387fed73feccc182a4ae0417f 277 Pfam PF13276 HTH-like domain 5 47 4.8E-7 T 21-04-2016 IPR025948 HTH-like domain SDY_0727 ee7a625387fed73feccc182a4ae0417f 277 SUPERFAMILY SSF53098 65 229 1.09E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0727 ee7a625387fed73feccc182a4ae0417f 277 Gene3D G3DSA:3.30.420.10 66 226 5.4E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0879 6d7d675f418d05c29874944be89efc88 245 Pfam PF01578 Cytochrome C assembly protein 9 184 1.3E-32 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PANTHER PTHR30071 1 221 1.1E-88 T 21-04-2016 SDY_0879 6d7d675f418d05c29874944be89efc88 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 5.4E-85 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_0879 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.3E-64 T 21-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 SDY_3337 dcea54a492989353e5d00375edd11005 331 PANTHER PTHR30217 240 330 4.0E-226 T 21-04-2016 SDY_3337 dcea54a492989353e5d00375edd11005 331 PANTHER PTHR30217 1 218 4.0E-226 T 21-04-2016 SDY_3337 dcea54a492989353e5d00375edd11005 331 Pfam PF01136 Peptidase family U32 76 330 1.1E-66 T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3337 dcea54a492989353e5d00375edd11005 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 21-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SDY_3337 dcea54a492989353e5d00375edd11005 331 PANTHER PTHR30217:SF3 240 330 4.0E-226 T 21-04-2016 SDY_3337 dcea54a492989353e5d00375edd11005 331 PANTHER PTHR30217:SF3 1 218 4.0E-226 T 21-04-2016 SDY_3337 dcea54a492989353e5d00375edd11005 331 SUPERFAMILY SSF51391 11 162 1.41E-5 T 21-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_3461 8f8e7dcdd5af371d5163be8ebe20de00 157 PANTHER PTHR38692:SF1 1 157 9.2E-86 T 21-04-2016 SDY_3461 8f8e7dcdd5af371d5163be8ebe20de00 157 PANTHER PTHR38692 1 157 9.2E-86 T 21-04-2016 SDY_3461 8f8e7dcdd5af371d5163be8ebe20de00 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.386 T 21-04-2016 IPR007456 Smg SDY_3461 8f8e7dcdd5af371d5163be8ebe20de00 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.7E-58 T 21-04-2016 IPR007456 Smg SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 Gene3D G3DSA:3.40.190.10 92 173 1.4E-8 T 21-04-2016 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 Pfam PF03466 LysR substrate binding domain 90 290 3.2E-38 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 Gene3D G3DSA:3.40.190.10 174 259 1.2E-16 T 21-04-2016 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 PANTHER PTHR30126 1 306 9.3E-173 T 21-04-2016 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 SUPERFAMILY SSF46785 4 108 5.17E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 SUPERFAMILY SSF53850 90 292 1.12E-38 T 21-04-2016 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 PANTHER PTHR30126:SF26 1 306 9.3E-173 T 21-04-2016 SDY_3419 37367906b3b99544fc8e9c3d5deb52f6 309 Gene3D G3DSA:1.10.10.10 3 87 1.2E-25 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 Gene3D G3DSA:1.20.1250.20 7 189 3.2E-30 T 21-04-2016 SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 PANTHER PTHR23502 1 389 1.1E-245 T 21-04-2016 SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 Gene3D G3DSA:1.20.1250.20 236 386 3.8E-4 T 21-04-2016 SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 SUPERFAMILY SSF103473 5 390 3.14E-56 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 PANTHER PTHR23502:SF32 1 389 1.1E-245 T 21-04-2016 SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 Pfam PF07690 Major Facilitator Superfamily 16 351 2.1E-39 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_4157 afe38c9c3cb5355c76a0486b9df255ef 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 2.9E-40 T 21-04-2016 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 SDY_0975 cf79a68eb2311bc5aed14ca093fa095d 94 Pfam PF03400 IS1 transposase 2 89 1.7E-49 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 4.2E-23 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 PANTHER PTHR30133 1 228 2.4E-180 T 21-04-2016 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 Gene3D G3DSA:1.10.3720.10 8 219 8.2E-39 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 PANTHER PTHR30133:SF1 1 228 2.4E-180 T 21-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 7.9E-19 T 21-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SDY_2507 eaf429c619b69cdbf7be347b93774a4a 228 SUPERFAMILY SSF161098 7 205 1.05E-37 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 PANTHER PTHR11935 1 251 1.4E-100 T 21-04-2016 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 PIRSF PIRSF005457 1 251 1.8E-88 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.974 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.6E-21 T 21-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 SMART SM00849 11 165 3.0E-39 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 Gene3D G3DSA:3.60.15.10 5 251 4.9E-85 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 PANTHER PTHR11935:SF7 1 251 1.4E-100 T 21-04-2016 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 9.3E-103 T 21-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 Pfam PF00753 Metallo-beta-lactamase superfamily 12 165 3.1E-23 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_0231 bddaa51bfaef8ed9efffef01dd31ec25 251 SUPERFAMILY SSF56281 1 251 8.91E-69 T 21-04-2016 IPR001279 Metallo-beta-lactamase SDY_1241 c5f7627e163def9e2f44e5a6a9356cfb 326 PANTHER PTHR30472 8 326 1.7E-117 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_1241 c5f7627e163def9e2f44e5a6a9356cfb 326 SUPERFAMILY SSF81345 5 322 2.09E-78 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1241 c5f7627e163def9e2f44e5a6a9356cfb 326 Pfam PF01032 FecCD transport family 12 322 2.4E-88 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_1241 c5f7627e163def9e2f44e5a6a9356cfb 326 Gene3D G3DSA:1.10.3470.10 3 325 1.4E-101 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_1241 c5f7627e163def9e2f44e5a6a9356cfb 326 PANTHER PTHR30472:SF34 8 326 1.7E-117 T 21-04-2016 SDY_4779 00f212716e908a4a8576bb468152b041 90 PANTHER PTHR33293 1 89 1.0E-19 T 21-04-2016 SDY_4779 00f212716e908a4a8576bb468152b041 90 Pfam PF12759 InsA C-terminal domain 42 87 9.6E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4779 00f212716e908a4a8576bb468152b041 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4779 00f212716e908a4a8576bb468152b041 90 PANTHER PTHR33293:SF2 1 89 1.0E-19 T 21-04-2016 SDY_2841 cf34afee474e690f524ac4bd2ce9b779 106 Pfam PF05717 IS66 Orf2 like protein 9 104 1.0E-39 T 21-04-2016 IPR008878 Transposase IS66, Orf2 SDY_2841 cf34afee474e690f524ac4bd2ce9b779 106 PANTHER PTHR36455 2 101 7.2E-36 T 21-04-2016 SDY_2841 cf34afee474e690f524ac4bd2ce9b779 106 PANTHER PTHR36455:SF1 2 101 7.2E-36 T 21-04-2016 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 Pfam PF03352 Methyladenine glycosylase 6 181 7.3E-82 T 21-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 Gene3D G3DSA:1.10.340.30 1 182 1.2E-88 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 SUPERFAMILY SSF48150 2 184 2.75E-83 T 21-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 PANTHER PTHR30037 1 183 2.4E-118 T 21-04-2016 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 PANTHER PTHR30037:SF4 1 183 2.4E-118 T 21-04-2016 SDY_4353 1809691d87457d4715013c908ea5b9f5 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 182 6.5E-97 T 21-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.463 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 SUPERFAMILY SSF53067 66 111 6.04E-28 T 21-04-2016 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 SUPERFAMILY SSF53067 143 341 6.04E-28 T 21-04-2016 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 SUPERFAMILY SSF53067 5 37 6.04E-28 T 21-04-2016 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 PANTHER PTHR30605:SF2 1 369 1.3E-281 T 21-04-2016 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 PANTHER PTHR30605 1 369 1.3E-281 T 21-04-2016 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 2.0E-178 T 21-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SDY_1863 1c7a1f26c450c8842d028a5ad0c0583b 369 Gene3D G3DSA:3.30.420.40 145 327 9.1E-73 T 21-04-2016 SDY_1222 71b318e3416255f0ca55231b2ea90530 176 SUPERFAMILY SSF158442 15 160 4.71E-46 T 21-04-2016 SDY_1222 71b318e3416255f0ca55231b2ea90530 176 PANTHER PTHR36570:SF2 1 176 5.3E-106 T 21-04-2016 SDY_1222 71b318e3416255f0ca55231b2ea90530 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 5.4E-45 T 21-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SDY_1222 71b318e3416255f0ca55231b2ea90530 176 Gene3D G3DSA:1.20.1550.10 1 174 5.9E-71 T 21-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SDY_1222 71b318e3416255f0ca55231b2ea90530 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.736 T 21-04-2016 IPR022920 Disulphide bond formation protein DsbB SDY_1222 71b318e3416255f0ca55231b2ea90530 176 PANTHER PTHR36570 1 176 5.3E-106 T 21-04-2016 SDY_0586 e41d7c48768c0fa3b592e308caba50eb 119 SUPERFAMILY SSF46689 20 112 4.48E-19 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0586 e41d7c48768c0fa3b592e308caba50eb 119 PANTHER PTHR33215 20 119 4.9E-60 T 21-04-2016 SDY_0586 e41d7c48768c0fa3b592e308caba50eb 119 Pfam PF01527 Transposase 21 93 2.6E-12 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_0586 e41d7c48768c0fa3b592e308caba50eb 119 Gene3D G3DSA:1.10.10.60 26 109 7.7E-22 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0586 e41d7c48768c0fa3b592e308caba50eb 119 PANTHER PTHR33215:SF4 20 119 4.9E-60 T 21-04-2016 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.043 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 PIRSF PIRSF005261 1 285 1.7E-72 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 Pfam PF01430 Hsp33 protein 5 272 3.2E-86 T 21-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 PANTHER PTHR30111 1 288 4.9E-94 T 21-04-2016 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:1.10.287.480 178 225 6.2E-27 T 21-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain SDY_3677 318d18d3118b6b44e1aed873603a898a 292 PANTHER PTHR30111:SF1 1 288 4.9E-94 T 21-04-2016 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF64397 4 232 7.19E-77 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.55.30.10 2 176 3.5E-67 T 21-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF118352 225 283 3.27E-20 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SDY_3677 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.90.1280.10 226 283 1.7E-25 T 21-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 Pfam PF00809 Pterin binding enzyme 18 257 2.7E-90 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 PANTHER PTHR20941:SF1 13 277 3.6E-130 T 21-04-2016 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 SUPERFAMILY SSF51717 6 274 4.71E-105 T 21-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.1E-101 T 21-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 PANTHER PTHR20941 13 277 3.6E-130 T 21-04-2016 SDY_3358 81177b50bfeccaba095c5941e6a755fe 282 Gene3D G3DSA:3.20.20.20 12 274 1.3E-109 T 21-04-2016 IPR000489 Pterin-binding domain GO:0042558 SDY_2335 83aff35c6d56a2b8100c7206d6845391 225 Pfam PF04288 MukE-like family 1 221 4.9E-126 T 21-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 SDY_2335 83aff35c6d56a2b8100c7206d6845391 225 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 1 225 48.74 T 21-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 PANTHER PTHR21581 1 377 0.0 T 21-04-2016 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 4.0E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 4.0E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 52 63 4.0E-17 T 21-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 SMART SM00936 272 363 1.6E-26 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 18 252 1.5E-98 T 21-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 Gene3D G3DSA:2.60.410.10 273 363 9.2E-27 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 PANTHER PTHR21581:SF5 1 377 0.0 T 21-04-2016 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 SUPERFAMILY SSF56601 7 272 2.36E-74 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 SUPERFAMILY SSF69189 272 365 1.22E-21 T 21-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 272 362 1.9E-20 T 21-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SDY_2233 e80c4250f42df9f17265b8f9a50fc7b5 378 Gene3D G3DSA:3.40.710.10 18 272 6.6E-94 T 21-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SDY_4502 188e454442e276b26583c7288c3554ac 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 9.5E-257 T 21-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 SDY_4502 188e454442e276b26583c7288c3554ac 549 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 5.4E-78 T 21-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SDY_4502 188e454442e276b26583c7288c3554ac 549 PANTHER PTHR10110:SF120 1 539 5.8E-216 T 21-04-2016 SDY_4502 188e454442e276b26583c7288c3554ac 549 PANTHER PTHR10110 1 539 5.8E-216 T 21-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SDY_3207 b05a3cd02bb816517323d4c47b8bb5cb 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 3.5E-42 T 21-04-2016 IPR009659 Protein of unknown function DUF1249 SDY_3207 b05a3cd02bb816517323d4c47b8bb5cb 140 PANTHER PTHR38774 1 140 7.1E-61 T 21-04-2016 SDY_3207 b05a3cd02bb816517323d4c47b8bb5cb 140 PANTHER PTHR38774:SF1 1 140 7.1E-61 T 21-04-2016 SDY_4118 415a62ff75e626d46fabc0c73e2ab838 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 1.1E-146 T 21-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 SDY_4118 415a62ff75e626d46fabc0c73e2ab838 281 PIRSF PIRSF011468 1 281 3.4E-167 T 21-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 55 123 3.2E-38 T 21-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 SMART SM00278 71 90 80.0 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 SMART SM00278 101 120 5.6 T 21-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 Pfam PF12836 Helix-hairpin-helix motif 60 118 3.6E-19 T 21-04-2016 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 PANTHER PTHR21180 20 123 3.6E-29 T 21-04-2016 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 Gene3D G3DSA:1.10.150.280 33 116 6.6E-17 T 21-04-2016 SDY_0290 5f1ca4d3d962e7551947c647f392f2af 123 SUPERFAMILY SSF47781 44 119 9.0E-24 T 21-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SDY_0104 aa58826a507c86d3878642c9a03e3ffd 78 Gene3D G3DSA:3.40.190.10 5 72 1.4E-11 T 21-04-2016 SDY_0104 aa58826a507c86d3878642c9a03e3ffd 78 SUPERFAMILY SSF53850 5 77 1.79E-13 T 21-04-2016 SDY_0104 aa58826a507c86d3878642c9a03e3ffd 78 PANTHER PTHR30118:SF6 5 77 5.2E-30 T 21-04-2016 SDY_0104 aa58826a507c86d3878642c9a03e3ffd 78 Pfam PF03466 LysR substrate binding domain 15 72 1.1E-7 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_0104 aa58826a507c86d3878642c9a03e3ffd 78 PANTHER PTHR30118 5 77 5.2E-30 T 21-04-2016 SDY_2525 bc76af2c847ecf8f8e2068c3c0635024 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 8.7E-81 T 21-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR00811 Bacterial general secretion pathway protein D signature 515 533 2.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR00811 Bacterial general secretion pathway protein D signature 287 297 2.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR00811 Bacterial general secretion pathway protein D signature 386 410 2.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR00811 Bacterial general secretion pathway protein D signature 538 552 2.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 431 2.8E-37 T 21-04-2016 IPR001775 GspD/PilQ family SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PANTHER PTHR30332:SF3 5 578 5.6E-215 T 21-04-2016 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 Pfam PF03958 Bacterial type II/III secretion system short domain 136 202 3.3E-16 T 21-04-2016 IPR005644 NolW-like SDY_3093 40f8fe61afb296dcee07df85c904330b 611 Pfam PF03958 Bacterial type II/III secretion system short domain 80 131 2.6E-6 T 21-04-2016 IPR005644 NolW-like SDY_3093 40f8fe61afb296dcee07df85c904330b 611 Pfam PF03958 Bacterial type II/III secretion system short domain 210 287 5.5E-16 T 21-04-2016 IPR005644 NolW-like SDY_3093 40f8fe61afb296dcee07df85c904330b 611 Pfam PF00263 Bacterial type II and III secretion system protein 390 551 3.1E-51 T 21-04-2016 IPR004846 Type II/III secretion system GO:0009306 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR01032 Gene IV protein signature 371 394 2.2E-16 T 21-04-2016 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR01032 Gene IV protein signature 478 506 2.2E-16 T 21-04-2016 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR01032 Gene IV protein signature 531 553 2.2E-16 T 21-04-2016 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PRINTS PR01032 Gene IV protein signature 411 434 2.2E-16 T 21-04-2016 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 3 559 4.5E-152 T 21-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SDY_3093 40f8fe61afb296dcee07df85c904330b 611 PANTHER PTHR30332 5 578 5.6E-215 T 21-04-2016 SDY_1505 507bf3b0dc4a60e9ecf8e39aabf03db4 213 PANTHER PTHR11080:SF2 5 210 2.4E-72 T 21-04-2016 SDY_1505 507bf3b0dc4a60e9ecf8e39aabf03db4 213 SUPERFAMILY SSF52499 4 208 2.88E-54 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_1505 507bf3b0dc4a60e9ecf8e39aabf03db4 213 PANTHER PTHR11080 5 210 2.4E-72 T 21-04-2016 SDY_1505 507bf3b0dc4a60e9ecf8e39aabf03db4 213 Pfam PF00857 Isochorismatase family 5 207 1.1E-37 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_1505 507bf3b0dc4a60e9ecf8e39aabf03db4 213 Gene3D G3DSA:3.40.50.850 4 208 3.5E-66 T 21-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 PANTHER PTHR23501:SF4 1 384 1.1E-156 T 21-04-2016 SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 Pfam PF07690 Major Facilitator Superfamily 10 342 4.4E-32 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 PANTHER PTHR23501 1 384 1.1E-156 T 21-04-2016 SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 SUPERFAMILY SSF103473 6 379 2.49E-52 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 Gene3D G3DSA:1.20.1250.20 6 192 6.3E-24 T 21-04-2016 SDY_1883 b94787472c3d2d87a2e23da87b76ffa0 389 Gene3D G3DSA:1.20.1250.20 200 380 9.3E-12 T 21-04-2016 SDY_1353 19965732aead3d68cf88d3f258667476 196 PANTHER PTHR21327 1 196 5.9E-146 T 21-04-2016 SDY_1353 19965732aead3d68cf88d3f258667476 196 SUPERFAMILY SSF142695 3 173 3.01E-67 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SDY_1353 19965732aead3d68cf88d3f258667476 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 8.2E-96 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SDY_1353 19965732aead3d68cf88d3f258667476 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.804 T 21-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SDY_1353 19965732aead3d68cf88d3f258667476 196 Pfam PF00925 GTP cyclohydrolase II 5 170 6.1E-69 T 21-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SDY_1353 19965732aead3d68cf88d3f258667476 196 PANTHER PTHR21327:SF14 1 196 5.9E-146 T 21-04-2016 SDY_4468 87fa1b11cd80d2fdf6b52252e0c8f4ec 58 SUPERFAMILY SSF50249 13 56 2.83E-7 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4468 87fa1b11cd80d2fdf6b52252e0c8f4ec 58 Gene3D G3DSA:2.40.50.140 16 57 1.1E-7 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_3211 7f5b851b0ef9fbd3340cf5dac4df7deb 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 1.9E-28 T 21-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SDY_3211 7f5b851b0ef9fbd3340cf5dac4df7deb 104 SUPERFAMILY SSF54909 1 100 1.8E-30 T 21-04-2016 IPR011008 Dimeric alpha-beta barrel SDY_3211 7f5b851b0ef9fbd3340cf5dac4df7deb 104 Gene3D G3DSA:3.30.70.900 1 102 2.2E-40 T 21-04-2016 SDY_3211 7f5b851b0ef9fbd3340cf5dac4df7deb 104 PANTHER PTHR33336 1 104 2.6E-23 T 21-04-2016 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 Hamap MF_00617 Mannosyl-3-phosphoglycerate phosphatase [mngB]. 6 252 45.022 T 21-04-2016 IPR012815 Mannosyl-3-phosphoglycerate phosphatase GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 1.6E-101 T 21-04-2016 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 7.6E-48 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 PANTHER PTHR10000:SF19 1 265 2.5E-172 T 21-04-2016 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 268 1.6E-103 T 21-04-2016 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 Gene3D G3DSA:3.40.50.1000 9 89 2.7E-39 T 21-04-2016 IPR023214 HAD-like domain SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 Gene3D G3DSA:3.40.50.1000 180 264 2.7E-39 T 21-04-2016 IPR023214 HAD-like domain SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 Gene3D G3DSA:3.30.980.20 94 179 5.6E-38 T 21-04-2016 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 PANTHER PTHR10000 1 265 2.5E-172 T 21-04-2016 SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 SUPERFAMILY SSF56784 6 232 2.71E-47 T 21-04-2016 IPR023214 HAD-like domain SDY_1051 9baf0ad7a9859f0865ef8dca6b62aaf3 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 9.5E-14 T 21-04-2016 IPR023214 HAD-like domain SDY_3040 8c172cbbadb30f4c5eaa7f6849aa0475 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.3E-23 T 21-04-2016 IPR022204 Prepilin peptidase dependent protein C SDY_3040 8c172cbbadb30f4c5eaa7f6849aa0475 107 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.7E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3040 8c172cbbadb30f4c5eaa7f6849aa0475 107 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_3040 8c172cbbadb30f4c5eaa7f6849aa0475 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.4E-6 T 21-04-2016 IPR012902 Prokaryotic N-terminal methylation site SDY_0997 5d04ed2894b20bf9a438769bfc444ba1 129 Pfam PF10627 Curli assembly protein CsgE 28 128 3.6E-32 T 21-04-2016 IPR018900 Curli assembly protein CsgE SDY_3301 ac6776923e8dad17a317b155714996de 443 PANTHER PTHR35334 11 443 0.0 T 21-04-2016 SDY_3301 ac6776923e8dad17a317b155714996de 443 PANTHER PTHR35334:SF4 11 443 0.0 T 21-04-2016 SDY_3825 d84c5e513cd87dc96007d0bf0ec0f340 199 Pfam PF07305 Protein of unknown function (DUF1454) 9 192 2.9E-86 T 21-04-2016 IPR009918 Protein of unknown function DUF1454 SDY_3008 635c5e6de8605f3a4b7f28ddc8d715fc 260 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.9E-29 T 21-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3008 635c5e6de8605f3a4b7f28ddc8d715fc 260 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 21-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3008 635c5e6de8605f3a4b7f28ddc8d715fc 260 PANTHER PTHR11079:SF60 3 245 9.7E-94 T 21-04-2016 SDY_3008 635c5e6de8605f3a4b7f28ddc8d715fc 260 SUPERFAMILY SSF55120 2 238 2.24E-61 T 21-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SDY_3008 635c5e6de8605f3a4b7f28ddc8d715fc 260 PANTHER PTHR11079 3 245 9.7E-94 T 21-04-2016 SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 SMART SM00749 129 191 9.4E-7 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 SMART SM00749 51 114 7.9E-13 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 Pfam PF04972 BON domain 46 113 9.2E-15 T 21-04-2016 IPR007055 BON domain SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 Pfam PF04972 BON domain 124 188 3.2E-18 T 21-04-2016 IPR007055 BON domain SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 PANTHER PTHR34606 1 190 8.9E-100 T 21-04-2016 SDY_3329 582ec35312a2dba3b260acc196a03a7b 191 PANTHER PTHR34606:SF4 1 190 8.9E-100 T 21-04-2016 SDY_4225 536ad58a7e8ef2296168c7d51c8c72bf 402 Pfam PF04986 Putative transposase 147 325 1.4E-51 T 21-04-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 SDY_4225 536ad58a7e8ef2296168c7d51c8c72bf 402 PANTHER PTHR37023 11 400 1.6E-18 T 21-04-2016 SDY_4225 536ad58a7e8ef2296168c7d51c8c72bf 402 Pfam PF14319 Transposase zinc-binding domain 21 123 2.6E-28 T 21-04-2016 IPR026889 Transposase zinc-binding domain SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384 141 175 2.7E-115 T 21-04-2016 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384 1 120 2.7E-115 T 21-04-2016 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 SUPERFAMILY SSF52218 5 170 1.96E-54 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 PIRSF PIRSF038996 1 172 2.2E-71 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 Gene3D G3DSA:3.40.50.360 3 168 1.0E-63 T 21-04-2016 IPR029039 Flavoprotein-like domain SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 21-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384:SF77 141 175 2.7E-115 T 21-04-2016 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384:SF77 1 120 2.7E-115 T 21-04-2016 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.6E-78 T 21-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 SDY_0624 0791e3a65ee6629fa7d1b8450305c4f7 176 Pfam PF00258 Flavodoxin 6 160 2.8E-34 T 21-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 SUPERFAMILY SSF111364 32 294 1.2E-89 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 Gene3D G3DSA:2.40.230.20 25 294 4.7E-106 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 3.1E-85 T 21-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_0323 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 2.7E-115 T 21-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 SDY_2948 e2b987a10d0bacc61f47994a9bbc71b2 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 6.0E-48 T 21-04-2016 IPR022721 Protein of unknown function DUF3561 SDY_2948 e2b987a10d0bacc61f47994a9bbc71b2 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 3.0E-52 T 21-04-2016 IPR022721 Protein of unknown function DUF3561 SDY_0364 df7c1ff1232fd9ac946d7b183aed494c 131 Pfam PF03400 IS1 transposase 2 131 2.9E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0364 df7c1ff1232fd9ac946d7b183aed494c 131 PANTHER PTHR33293 6 126 1.9E-25 T 21-04-2016 SDY_0364 df7c1ff1232fd9ac946d7b183aed494c 131 PANTHER PTHR33293:SF1 6 126 1.9E-25 T 21-04-2016 SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 SUPERFAMILY SSF89155 7 195 1.05E-41 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 PANTHER PTHR34227 1 197 7.3E-110 T 21-04-2016 SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 Gene3D G3DSA:1.10.3480.10 4 195 5.7E-34 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 Pfam PF02613 Nitrate reductase delta subunit 48 169 2.4E-24 T 21-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 PANTHER PTHR34227:SF1 1 197 7.3E-110 T 21-04-2016 SDY_0972 eb83e554c8c26dddc2a9f612277d73b2 199 Hamap MF_01150 Chaperone protein TorD [torD]. 1 199 30.895 T 21-04-2016 IPR023069 Chaperone TorD SDY_0914 27b1247117a77c7a35cf2d50f27cbc1e 355 Gene3D G3DSA:2.60.40.1090 211 354 4.0E-10 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0914 27b1247117a77c7a35cf2d50f27cbc1e 355 SUPERFAMILY SSF49401 218 354 3.08E-13 T 21-04-2016 IPR008966 Adhesion domain SDY_0914 27b1247117a77c7a35cf2d50f27cbc1e 355 Pfam PF00419 Fimbrial protein 210 354 2.3E-19 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_1817 590127badbcf03f51349813aa6afeb2f 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 93 1.6E-40 T 21-04-2016 IPR022597 Endoribonuclease GhoS GO:0004521 SDY_1817 590127badbcf03f51349813aa6afeb2f 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 96 1.0E-49 T 21-04-2016 IPR020499 Uncharacterised protein family YdiZ SDY_0011 92505b134508800e79475362b793a999 237 Pfam PF03981 Ubiquinol-cytochrome C chaperone 58 220 4.0E-23 T 21-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 SDY_0011 92505b134508800e79475362b793a999 237 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 3.2E-14 T 21-04-2016 IPR025217 Domain of unknown function DUF3944 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 PANTHER PTHR40455 17 161 3.5E-33 T 21-04-2016 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 Pfam PF01381 Helix-turn-helix 107 160 1.1E-8 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 PANTHER PTHR40455:SF1 17 161 3.5E-33 T 21-04-2016 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 Gene3D G3DSA:1.10.260.40 99 161 4.1E-10 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 SMART SM00530 106 160 9.4E-5 T 21-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SDY_2913 22d8057335d31ba941ed78ebf6309d51 161 SUPERFAMILY SSF47413 105 161 7.6E-7 T 21-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SDY_1000 1d3f6ae6a32ba5e38b603f68547e8f50 131 PANTHER PTHR33293 6 126 2.9E-25 T 21-04-2016 SDY_1000 1d3f6ae6a32ba5e38b603f68547e8f50 131 PANTHER PTHR33293:SF1 6 126 2.9E-25 T 21-04-2016 SDY_1000 1d3f6ae6a32ba5e38b603f68547e8f50 131 Pfam PF03400 IS1 transposase 2 130 7.8E-77 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3731 fc6d526ad60631b467423c16c138c09e 158 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 1.1E-52 T 21-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 SDY_3731 fc6d526ad60631b467423c16c138c09e 158 PIRSF PIRSF016548 1 158 6.4E-63 T 21-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 SDY_3731 fc6d526ad60631b467423c16c138c09e 158 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 40.534 T 21-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd SDY_1691 815f9724ac919ce69ad50c2d63bb59ba 84 Pfam PF03891 Domain of unknown function (DUF333) 32 78 7.7E-18 T 21-04-2016 IPR005590 Protein of unknown function DUF333 SDY_1691 815f9724ac919ce69ad50c2d63bb59ba 84 PANTHER PTHR38008 1 84 1.7E-21 T 21-04-2016 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 SUPERFAMILY SSF52374 3 213 1.91E-59 T 21-04-2016 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 7.3E-13 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 5.0E-63 T 21-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 PANTHER PTHR12039 1 213 3.3E-63 T 21-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 Pfam PF01467 Cytidylyltransferase-like 7 187 2.0E-37 T 21-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 30.085 T 21-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SDY_0561 a72a95f6251e191bc66c183a9702f1e6 213 Gene3D G3DSA:3.40.50.620 6 213 1.2E-66 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3113 d7dbb589369144842b0aeadbbe674330 108 PANTHER PTHR38778 2 108 2.1E-55 T 21-04-2016 SDY_3113 d7dbb589369144842b0aeadbbe674330 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.6E-43 T 21-04-2016 IPR007416 Protein of unknown function DUF469 SDY_3113 d7dbb589369144842b0aeadbbe674330 108 PANTHER PTHR38778:SF1 2 108 2.1E-55 T 21-04-2016 SDY_1967 cfe71912c616ffe12d5f3ed5caf1d009 206 PANTHER PTHR35529 20 206 6.5E-78 T 21-04-2016 SDY_1967 cfe71912c616ffe12d5f3ed5caf1d009 206 Pfam PF02659 Putative manganese efflux pump 49 200 1.4E-53 T 21-04-2016 IPR003810 Putative manganese efflux pump SDY_1967 cfe71912c616ffe12d5f3ed5caf1d009 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 19 203 25.746 T 21-04-2016 IPR022929 Putative manganese efflux pump MntP SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505:SF11 20 79 7.8E-126 T 21-04-2016 SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505:SF11 155 406 7.8E-126 T 21-04-2016 SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505:SF11 95 137 7.8E-126 T 21-04-2016 SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505 20 79 7.8E-126 T 21-04-2016 SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505 155 406 7.8E-126 T 21-04-2016 SDY_2585 15ebcef10e3a3662f84a293d819951f8 415 PANTHER PTHR30505 95 137 7.8E-126 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 4.9E-24 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 SUPERFAMILY SSF53686 1 426 2.75E-132 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 7.9E-131 T 21-04-2016 IPR004450 Threonine synthase-like SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 196 319 7.6E-52 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 324 401 2.3E-16 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 21-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.90.1380.10 1 84 2.7E-22 T 21-04-2016 IPR029144 Threonine synthase, N-terminal SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 106 195 1.3E-12 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 PANTHER PTHR10314:SF1 53 428 2.3E-144 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 PANTHER PTHR10314:SF1 25 36 2.3E-144 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 Pfam PF14821 Threonine synthase N terminus 8 80 7.5E-14 T 21-04-2016 IPR029144 Threonine synthase, N-terminal SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 PANTHER PTHR10314 53 428 2.3E-144 T 21-04-2016 SDY_0004 b4dd51958f3c7a7a21e0f222dcbbd764 428 PANTHER PTHR10314 25 36 2.3E-144 T 21-04-2016 SDY_4391 812912794cc80a1be6472a871e11a1e4 41 Pfam PF08085 Entericidin EcnA/B family 20 40 1.8E-7 T 21-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.362 T 21-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 SUPERFAMILY SSF46548 139 256 5.23E-19 T 21-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.2E-23 T 21-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 3.7E-19 T 21-04-2016 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 PANTHER PTHR30002:SF4 2 371 2.9E-218 T 21-04-2016 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 PANTHER PTHR30002 2 371 2.9E-218 T 21-04-2016 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 4.9E-154 T 21-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SDY_4425 0ef327f2bfdbb2d1d1ba472299ebf49f 379 Gene3D G3DSA:3.30.70.20 190 257 5.1E-6 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 PANTHER PTHR11938 3 157 5.8E-80 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 PANTHER PTHR11938:SF85 3 157 5.8E-80 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 75 118 1.8E-26 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 7.4E-80 T 21-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 21-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 4 74 6.5E-18 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 2.0E-29 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 SUPERFAMILY SSF54862 3 198 6.59E-71 T 21-04-2016 SDY_1567 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 119 171 2.6E-18 T 21-04-2016 SDY_3130 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 11 135 1.3E-50 T 21-04-2016 SDY_3130 6e54240b246735d5a285824d43665226 384 PANTHER PTHR11964 1 376 2.1E-290 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 112 232 7.46E-52 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 21-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.288 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 21-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.7E-70 T 21-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 244 381 4.2E-72 T 21-04-2016 SDY_3130 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 233 382 9.03E-72 T 21-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 136 233 4.4E-44 T 21-04-2016 SDY_3130 6e54240b246735d5a285824d43665226 384 PIRSF PIRSF000497 1 382 2.4E-176 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.6E-43 T 21-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3130 6e54240b246735d5a285824d43665226 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.5E-201 T 21-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SDY_3101 dcce1d1e7ee1ee9e6021dab56cd6922e 286 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 1 285 1.5E-73 T 21-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 SDY_3101 dcce1d1e7ee1ee9e6021dab56cd6922e 286 Pfam PF12693 GspL periplasmic domain 128 285 3.5E-44 T 21-04-2016 IPR025691 GspL periplasmic domain SDY_4640 a624ae0eb2eec2f41df27f71df85cf96 516 PIRSF PIRSF028991 6 516 2.7E-280 T 21-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted SDY_4640 a624ae0eb2eec2f41df27f71df85cf96 516 Gene3D G3DSA:3.20.70.20 84 253 3.2E-9 T 21-04-2016 SDY_4640 a624ae0eb2eec2f41df27f71df85cf96 516 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 2.8E-223 T 21-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted SDY_4640 a624ae0eb2eec2f41df27f71df85cf96 516 SUPERFAMILY SSF51998 24 470 4.58E-88 T 21-04-2016 SDY_4640 a624ae0eb2eec2f41df27f71df85cf96 516 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 504 2.6E-235 T 21-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted SDY_2363 06733d56530f70d6dd29739a0306cfee 382 PANTHER PTHR23521:SF1 2 381 6.7E-236 T 21-04-2016 SDY_2363 06733d56530f70d6dd29739a0306cfee 382 Pfam PF07690 Major Facilitator Superfamily 12 227 3.5E-14 T 21-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SDY_2363 06733d56530f70d6dd29739a0306cfee 382 Gene3D G3DSA:1.20.1250.20 208 372 1.3E-16 T 21-04-2016 SDY_2363 06733d56530f70d6dd29739a0306cfee 382 Gene3D G3DSA:1.20.1250.20 6 184 1.5E-20 T 21-04-2016 SDY_2363 06733d56530f70d6dd29739a0306cfee 382 PANTHER PTHR23521 2 381 6.7E-236 T 21-04-2016 SDY_2363 06733d56530f70d6dd29739a0306cfee 382 SUPERFAMILY SSF103473 6 376 7.85E-45 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2363 06733d56530f70d6dd29739a0306cfee 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 40.598 T 21-04-2016 IPR023745 MSF-type transporter, YcaD SDY_0697 bed93419cf15ec80e23fda4d8cc017c9 126 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 50 126 4.0E-39 T 21-04-2016 IPR020363 Uncharacterised protein family YbgS SDY_0697 bed93419cf15ec80e23fda4d8cc017c9 126 Pfam PF13985 YbgS-like protein 3 126 6.5E-54 T 21-04-2016 IPR020363 Uncharacterised protein family YbgS SDY_4637 b22845c0b9e27c5632763706da804922 357 SUPERFAMILY SSF52151 21 279 2.25E-43 T 21-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SDY_4637 b22845c0b9e27c5632763706da804922 357 PANTHER PTHR14226 1 357 1.7E-168 T 21-04-2016 SDY_4637 b22845c0b9e27c5632763706da804922 357 Gene3D G3DSA:3.40.1090.10 27 196 6.1E-7 T 21-04-2016 SDY_4637 b22845c0b9e27c5632763706da804922 357 PANTHER PTHR14226:SF25 1 357 1.7E-168 T 21-04-2016 SDY_4637 b22845c0b9e27c5632763706da804922 357 Pfam PF01734 Patatin-like phospholipase 27 195 4.3E-21 T 21-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SDY_0672 0214ae810f3ac6b92c92fd94ae3cec1d 456 Pfam PF07287 Protein of unknown function (DUF1446) 63 309 1.6E-19 T 21-04-2016 IPR010839 Protein of unknown function DUF1446 SDY_2135 4f894ac8b4c394080025f89b72af4292 125 Pfam PF03400 IS1 transposase 1 125 9.6E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2135 4f894ac8b4c394080025f89b72af4292 125 PANTHER PTHR33293 1 124 2.8E-42 T 21-04-2016 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 PANTHER PTHR21225 1 347 2.9E-229 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 Gene3D G3DSA:3.20.20.70 10 348 1.3E-154 T 21-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 PIRSF PIRSF001361 1 354 7.2E-165 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 Pfam PF00793 DAHP synthetase I family 39 340 9.8E-109 T 21-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 SUPERFAMILY SSF51569 8 346 1.1E-135 T 21-04-2016 SDY_2765 c4b52d0adfc3a353acae9b84dddbcdf0 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 9.0E-176 T 21-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SDY_3208 0d4c39db9daab88884da9237530e7514 275 PANTHER PTHR12905:SF7 51 275 1.3E-128 T 21-04-2016 SDY_3208 0d4c39db9daab88884da9237530e7514 275 SUPERFAMILY SSF56300 16 269 1.27E-61 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_3208 0d4c39db9daab88884da9237530e7514 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-27 T 21-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 SDY_3208 0d4c39db9daab88884da9237530e7514 275 PANTHER PTHR12905:SF7 6 35 1.3E-128 T 21-04-2016 SDY_3208 0d4c39db9daab88884da9237530e7514 275 PANTHER PTHR12905 51 275 1.3E-128 T 21-04-2016 SDY_3208 0d4c39db9daab88884da9237530e7514 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 43.006 T 21-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 SDY_3208 0d4c39db9daab88884da9237530e7514 275 Gene3D G3DSA:3.60.21.10 14 258 7.4E-42 T 21-04-2016 IPR029052 Metallo-dependent phosphatase-like SDY_3208 0d4c39db9daab88884da9237530e7514 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.6E-20 T 21-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SDY_3208 0d4c39db9daab88884da9237530e7514 275 PANTHER PTHR12905 6 35 1.3E-128 T 21-04-2016 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.5E-31 T 21-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.9E-76 T 21-04-2016 IPR000150 Cof protein GO:0016787 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 Gene3D G3DSA:3.40.50.1000 184 269 4.0E-61 T 21-04-2016 IPR023214 HAD-like domain SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 Gene3D G3DSA:3.40.50.1000 1 76 4.0E-61 T 21-04-2016 IPR023214 HAD-like domain SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 PANTHER PTHR10000 1 270 2.9E-168 T 21-04-2016 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 PANTHER PTHR10000:SF29 1 270 2.9E-168 T 21-04-2016 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.0E-67 T 21-04-2016 IPR023214 HAD-like domain SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 Gene3D G3DSA:3.30.1240.10 88 183 4.2E-41 T 21-04-2016 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 21-04-2016 IPR000150 Cof protein GO:0016787 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 21-04-2016 SDY_4179 fbe13cc00863ceb7098ed2845937f1ce 270 SUPERFAMILY SSF56784 1 269 2.16E-76 T 21-04-2016 IPR023214 HAD-like domain SDY_P069 eaedbdff4407becdc01f91228633dd36 74 PANTHER PTHR30047:SF4 1 74 3.4E-55 T 21-04-2016 SDY_P069 eaedbdff4407becdc01f91228633dd36 74 PANTHER PTHR30047 1 74 3.4E-55 T 21-04-2016 SDY_P069 eaedbdff4407becdc01f91228633dd36 74 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 2 74 1.4E-5 T 21-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SDY_2280 dbc4bf28211145813350749fc1d1161b 285 Pfam PF03824 High-affinity nickel-transport protein 13 284 1.7E-68 T 21-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SDY_2280 dbc4bf28211145813350749fc1d1161b 285 PANTHER PTHR40659 14 167 2.8E-21 T 21-04-2016 SDY_2280 dbc4bf28211145813350749fc1d1161b 285 PANTHER PTHR40659 186 284 2.8E-21 T 21-04-2016 SDY_0381 8173245f8b8fabff38d7a7440ced9e98 100 Gene3D G3DSA:1.10.10.60 9 90 1.4E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0381 8173245f8b8fabff38d7a7440ced9e98 100 PANTHER PTHR33215 3 100 8.8E-18 T 21-04-2016 SDY_0381 8173245f8b8fabff38d7a7440ced9e98 100 SUPERFAMILY SSF46689 4 94 1.24E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0381 8173245f8b8fabff38d7a7440ced9e98 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_1895 8173245f8b8fabff38d7a7440ced9e98 100 Gene3D G3DSA:1.10.10.60 9 90 1.4E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1895 8173245f8b8fabff38d7a7440ced9e98 100 PANTHER PTHR33215 3 100 8.8E-18 T 21-04-2016 SDY_1895 8173245f8b8fabff38d7a7440ced9e98 100 SUPERFAMILY SSF46689 4 94 1.24E-15 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1895 8173245f8b8fabff38d7a7440ced9e98 100 Pfam PF01527 Transposase 3 74 8.7E-18 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2300 27f676681a6362b462ec3b4fcb0ed417 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 69 8.1E-10 T 21-04-2016 IPR010780 Protein of unknown function DUF1375 SDY_2718 85e2a6f4169479d48870bbf1d2c2cd93 258 Pfam PF07179 SseB protein N-terminal domain 8 119 1.6E-25 T 21-04-2016 IPR009839 SseB protein N-terminal domain SDY_2718 85e2a6f4169479d48870bbf1d2c2cd93 258 Pfam PF14581 SseB protein C-terminal domain 137 243 1.7E-31 T 21-04-2016 IPR027945 SseB protein, C-terminal SDY_4555 77e673648253e578993b884895bff75a 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 62 2.0E-29 T 21-04-2016 IPR024487 Cellulose biosynthesis protein BcsR SDY_4555 77e673648253e578993b884895bff75a 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 2.0E-22 T 21-04-2016 IPR024487 Cellulose biosynthesis protein BcsR SDY_4507 056e8e4bef49934a1dd109ae1c88ae9f 93 Pfam PF15940 Family of unknown function 1 90 3.5E-43 T 21-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 SDY_4507 056e8e4bef49934a1dd109ae1c88ae9f 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 2.0E-37 T 21-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 SDY_4507 056e8e4bef49934a1dd109ae1c88ae9f 93 PIRSF PIRSF030798 1 93 2.1E-65 T 21-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 SDY_1598 35b1c7934308c66f9597dc4890ca4134 221 PANTHER PTHR33508:SF2 1 221 9.7E-142 T 21-04-2016 SDY_1598 35b1c7934308c66f9597dc4890ca4134 221 Pfam PF01914 MarC family integral membrane protein 5 217 1.8E-71 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SDY_1598 35b1c7934308c66f9597dc4890ca4134 221 PANTHER PTHR33508 1 221 9.7E-142 T 21-04-2016 SDY_1598 35b1c7934308c66f9597dc4890ca4134 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 213 1.1E-36 T 21-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SDY_3674 b7a983b525dedd2984336f9be107583a 574 Pfam PF13687 Domain of unknown function (DUF4153) 150 389 2.0E-44 T 21-04-2016 IPR025291 Protein of unknown function DUF4153 SDY_0408 2701c2e3a0261f1bb847dde8ba84d496 268 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 15 260 1.1E-115 T 21-04-2016 IPR005226 UPF0014 family SDY_0408 2701c2e3a0261f1bb847dde8ba84d496 268 PANTHER PTHR30028:SF0 10 268 7.0E-98 T 21-04-2016 IPR005226 UPF0014 family SDY_0408 2701c2e3a0261f1bb847dde8ba84d496 268 Pfam PF03649 Uncharacterised protein family (UPF0014) 19 254 1.8E-82 T 21-04-2016 IPR005226 UPF0014 family SDY_0408 2701c2e3a0261f1bb847dde8ba84d496 268 PANTHER PTHR30028 10 268 7.0E-98 T 21-04-2016 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 3.7E-104 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PIRSF PIRSF000513 9 262 5.2E-104 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PANTHER PTHR20857 15 260 5.7E-86 T 21-04-2016 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 261 3.4E-100 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PANTHER PTHR20857:SF19 15 260 5.7E-86 T 21-04-2016 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 3.5E-41 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 29.553 T 21-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 Gene3D G3DSA:3.40.1190.20 10 260 6.6E-85 T 21-04-2016 IPR029056 Ribokinase-like SDY_2278 71cdcfb171db31fb075f0ce49d09e942 262 SUPERFAMILY SSF53613 13 260 6.87E-59 T 21-04-2016 IPR029056 Ribokinase-like SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 97.407 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 PANTHER PTHR32182:SF0 1 355 1.2E-78 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 PANTHER PTHR32182 1 355 1.2E-78 T 21-04-2016 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 Gene3D G3DSA:3.40.50.300 230 345 4.2E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 Gene3D G3DSA:3.40.50.300 1 171 4.2E-37 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 2.4E-41 T 21-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.7E-140 T 21-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 21-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SDY_4182 53a4161cc86c91d8fc4ba6be04817938 357 SUPERFAMILY SSF52540 1 342 2.67E-40 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_1919 2183c321b4284b0eb509d52699611670 131 Pfam PF03400 IS1 transposase 2 131 1.3E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1919 2183c321b4284b0eb509d52699611670 131 PANTHER PTHR33293:SF1 6 126 2.1E-25 T 21-04-2016 SDY_1919 2183c321b4284b0eb509d52699611670 131 PANTHER PTHR33293 6 126 2.1E-25 T 21-04-2016 SDY_2440a 5445e167f702bb5ee3e2daf1cb7facca 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2440a 5445e167f702bb5ee3e2daf1cb7facca 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2440a 5445e167f702bb5ee3e2daf1cb7facca 91 PANTHER PTHR33293 2 89 1.6E-33 T 21-04-2016 SDY_2440a 5445e167f702bb5ee3e2daf1cb7facca 91 Pfam PF12759 InsA C-terminal domain 43 88 1.1E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_2440a 5445e167f702bb5ee3e2daf1cb7facca 91 SUPERFAMILY SSF46689 52 86 1.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_1129 eaeda69eb0387c7e09c603fae1146e28 218 Gene3D G3DSA:3.60.110.10 4 113 6.6E-11 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_1129 eaeda69eb0387c7e09c603fae1146e28 218 SUPERFAMILY SSF56317 4 196 2.62E-18 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_1129 eaeda69eb0387c7e09c603fae1146e28 218 Pfam PF00795 Carbon-nitrogen hydrolase 5 113 7.8E-16 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 SUPERFAMILY SSF56322 12 428 6.67E-103 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 430 41.705 T 21-04-2016 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 3.0E-107 T 21-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 PANTHER PTHR11236:SF3 27 431 3.9E-140 T 21-04-2016 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 PANTHER PTHR11236 27 431 3.9E-140 T 21-04-2016 SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 Pfam PF00425 chorismate binding enzyme 169 420 6.8E-62 T 21-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SDY_2461 c6d785fb71a1a480e2f1a938df6c66ce 431 Gene3D G3DSA:3.60.120.10 38 429 4.4E-79 T 21-04-2016 IPR005801 ADC synthase GO:0009058 SDY_0324 9423b535b2adce32a0371dc85f4279dc 115 SMART SM00507 15 70 3.2E-6 T 21-04-2016 IPR003615 HNH nuclease SDY_0324 9423b535b2adce32a0371dc85f4279dc 115 Pfam PF01844 HNH endonuclease 27 75 6.4E-12 T 21-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 23.94 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 2.8E-39 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 PANTHER PTHR38686 2 512 8.0E-175 T 21-04-2016 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 1.9E-122 T 21-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 Gene3D G3DSA:3.60.110.10 216 478 3.3E-22 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_0593 ee1e2ee0043bd1339d14bd397c213706 512 SUPERFAMILY SSF56317 217 490 8.24E-37 T 21-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SDY_1870 634f3fdd5541f81cf568858124aad558 173 PANTHER PTHR10003:SF40 1 172 3.9E-112 T 21-04-2016 SDY_1870 634f3fdd5541f81cf568858124aad558 173 Gene3D G3DSA:2.60.40.200 23 173 1.9E-43 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1870 634f3fdd5541f81cf568858124aad558 173 SUPERFAMILY SSF49329 23 173 3.01E-44 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1870 634f3fdd5541f81cf568858124aad558 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 1.0E-28 T 21-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SDY_1870 634f3fdd5541f81cf568858124aad558 173 PANTHER PTHR10003 1 172 3.9E-112 T 21-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 PANTHER PTHR12338:SF7 19 327 1.5E-91 T 21-04-2016 SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 212 247 5.4E-5 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 177 208 1.2E-6 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 230 266 1.2E-5 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 140 172 8.3E-7 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 PANTHER PTHR12338 19 327 1.5E-91 T 21-04-2016 SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 Gene3D G3DSA:2.160.20.20 83 266 5.0E-9 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 Gene3D G3DSA:2.160.20.20 307 321 5.0E-9 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 226 274 1.2E-6 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 137 186 2.1E-10 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1202 5644553f9c9aa8c69dbe92e05f4f35dc 339 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 291 328 1.5E-9 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_3196 38c803deff74c060647b298a5810de1d 255 Pfam PF13276 HTH-like domain 5 47 8.1E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_3196 38c803deff74c060647b298a5810de1d 255 Gene3D G3DSA:3.30.420.10 66 226 4.3E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3196 38c803deff74c060647b298a5810de1d 255 Pfam PF00665 Integrase core domain 72 186 5.1E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_3196 38c803deff74c060647b298a5810de1d 255 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_3196 38c803deff74c060647b298a5810de1d 255 SUPERFAMILY SSF53098 65 229 8.5E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3821 0da58e887f0d36bd578530ea82271257 142 PIRSF PIRSF006276 1 141 6.0E-44 T 21-04-2016 IPR006015 Universal stress protein A SDY_3821 0da58e887f0d36bd578530ea82271257 142 Gene3D G3DSA:3.40.50.620 3 138 2.4E-22 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_3821 0da58e887f0d36bd578530ea82271257 142 SUPERFAMILY SSF52402 3 138 1.05E-22 T 21-04-2016 SDY_3821 0da58e887f0d36bd578530ea82271257 142 Pfam PF00582 Universal stress protein family 3 137 3.0E-19 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_3907 1a5532c1da594bb56ab5fad0ef936e2a 103 Pfam PF02416 mttA/Hcf106 family 18 69 3.3E-15 T 21-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SDY_3907 1a5532c1da594bb56ab5fad0ef936e2a 103 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 17 61 5.5E-21 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SDY_3907 1a5532c1da594bb56ab5fad0ef936e2a 103 PANTHER PTHR33162 14 103 2.2E-24 T 21-04-2016 SDY_3907 1a5532c1da594bb56ab5fad0ef936e2a 103 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 15 96 25.479 T 21-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SDY_4103 817382de225b1f9ea6b82241a6e6fc9d 281 Pfam PF13990 YjcZ-like protein 10 276 1.3E-137 T 21-04-2016 IPR025599 YjcZ-like protein SDY_1696 6b2a44725c222898af8834d81fe2c51f 60 SUPERFAMILY SSF103063 1 60 3.01E-32 T 21-04-2016 IPR015051 Protein YoaG SDY_1696 6b2a44725c222898af8834d81fe2c51f 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 5.3E-32 T 21-04-2016 IPR015051 Protein YoaG SDY_1696 6b2a44725c222898af8834d81fe2c51f 60 Gene3D G3DSA:3.30.160.220 1 60 2.8E-36 T 21-04-2016 IPR015051 Protein YoaG SDY_2616 cd7a17fbc17f3a936d0f0b18007d92e3 122 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 107 6.0E-58 T 21-04-2016 SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 21-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 1.9E-69 T 21-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 PANTHER PTHR10374 1 129 1.5E-63 T 21-04-2016 SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 Gene3D G3DSA:3.10.180.10 1 127 3.4E-48 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 SUPERFAMILY SSF54593 1 130 2.69E-34 T 21-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SDY_1877 eb054aa220e7391b7116f1e08101ae67 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.6E-25 T 21-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SDY_1254 27ff9a9d324af2027feeaf1a0f47649f 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 1.6E-46 T 21-04-2016 IPR019698 Protein of unknown function DUF2583 SDY_3131 244d5c135050a2dbef58666e0f94b278 83 Pfam PF10885 Protein of unknown function (DUF2684) 3 79 1.8E-22 T 21-04-2016 IPR020263 Uncharacterised protein family YqgD SDY_3131 244d5c135050a2dbef58666e0f94b278 83 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 83 2.0E-42 T 21-04-2016 IPR020263 Uncharacterised protein family YqgD SDY_0066 25c176104b8a298c5e47bbc96315ab21 95 SUPERFAMILY SSF54862 40 90 2.99E-8 T 21-04-2016 SDY_0066 25c176104b8a298c5e47bbc96315ab21 95 Gene3D G3DSA:3.30.70.20 40 69 1.8E-5 T 21-04-2016 SDY_0066 25c176104b8a298c5e47bbc96315ab21 95 PANTHER PTHR10617 1 80 1.8E-37 T 21-04-2016 SDY_0066 25c176104b8a298c5e47bbc96315ab21 95 PIRSF PIRSF036548 1 95 6.8E-39 T 21-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 SDY_0066 25c176104b8a298c5e47bbc96315ab21 95 PANTHER PTHR10617:SF112 1 80 1.8E-37 T 21-04-2016 SDY_1404 49a39912cd489f84449d5a367ccd491c 262 SUPERFAMILY SSF53187 154 251 4.96E-33 T 21-04-2016 SDY_1404 49a39912cd489f84449d5a367ccd491c 262 SUPERFAMILY SSF53187 38 127 4.96E-33 T 21-04-2016 SDY_1404 49a39912cd489f84449d5a367ccd491c 262 Gene3D G3DSA:3.40.630.10 38 243 6.2E-43 T 21-04-2016 SDY_1404 49a39912cd489f84449d5a367ccd491c 262 Pfam PF00246 Zinc carboxypeptidase 93 177 1.3E-12 T 21-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 SUPERFAMILY SSF46689 117 158 3.05E-6 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 Pfam PF01527 Transposase 2 51 4.8E-6 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 Pfam PF01527 Transposase 118 158 4.8E-7 T 21-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 Gene3D G3DSA:1.10.10.60 3 50 1.2E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 Gene3D G3DSA:1.10.10.60 120 156 1.8E-7 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_2848 e9eaf0197156dacc02fe9db855a03e6e 176 SUPERFAMILY SSF46689 2 51 1.77E-5 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_3415 bef534d16851ef82b00c619bda4088a0 90 SUPERFAMILY SSF52038 1 89 3.53E-30 T 21-04-2016 IPR000468 Barstar (barnase inhibitor) SDY_3415 bef534d16851ef82b00c619bda4088a0 90 Pfam PF01337 Barstar (barnase inhibitor) 5 79 2.2E-5 T 21-04-2016 IPR000468 Barstar (barnase inhibitor) SDY_3415 bef534d16851ef82b00c619bda4088a0 90 Gene3D G3DSA:3.30.370.10 1 85 4.5E-15 T 21-04-2016 IPR000468 Barstar (barnase inhibitor) SDY_1157 f2bae32ea0cf71b7c9f682a21f130cac 132 PANTHER PTHR33293 33 131 5.8E-27 T 21-04-2016 SDY_1157 f2bae32ea0cf71b7c9f682a21f130cac 132 Pfam PF03400 IS1 transposase 45 132 1.2E-46 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1429 f2bae32ea0cf71b7c9f682a21f130cac 132 PANTHER PTHR33293 33 131 5.8E-27 T 21-04-2016 SDY_1429 f2bae32ea0cf71b7c9f682a21f130cac 132 Pfam PF03400 IS1 transposase 45 132 1.2E-46 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 PANTHER PTHR33823 8 149 9.5E-71 T 21-04-2016 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.333 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.7E-51 T 21-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 21-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF109635 9 109 1.07E-37 T 21-04-2016 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 21-04-2016 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.93E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.93E-5 T 21-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 3.0E-10 T 21-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SDY_0161 5492ee991adc2f4a849470a45e6b2141 151 PANTHER PTHR33823:SF2 8 149 9.5E-71 T 21-04-2016 SDY_0102 46c821c81f0831a176a5ccf89c57dfe6 27 Pfam PF08054 Leucine operon leader peptide 1 27 1.0E-16 T 21-04-2016 IPR012570 Leucine operon leader peptide GO:0009098 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 SUPERFAMILY SSF109755 296 506 2.62E-23 T 21-04-2016 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 Pfam PF02690 Na+/Pi-cotransporter 2 122 1.2E-31 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 Pfam PF02690 Na+/Pi-cotransporter 133 227 2.9E-8 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 PANTHER PTHR10010 1 421 1.2E-39 T 21-04-2016 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 283 2.2E-126 T 21-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 PANTHER PTHR10010:SF26 1 421 1.2E-39 T 21-04-2016 SDY_4319 27e62f8ef3098df8ac94eed37e3df59e 518 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 42 495 2.4E-171 T 21-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 SUPERFAMILY SSF56176 344 428 4.91E-24 T 21-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF01595 Domain of unknown function DUF21 7 197 3.9E-38 T 21-04-2016 IPR002550 Domain of unknown function DUF21 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 PANTHER PTHR22777 1 446 0.0 T 21-04-2016 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 SMART SM01091 346 426 4.6E-30 T 21-04-2016 IPR005170 Transporter-associated domain SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 Gene3D G3DSA:3.10.580.10 198 334 1.2E-14 T 21-04-2016 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 PANTHER PTHR22777:SF16 1 446 0.0 T 21-04-2016 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF03471 Transporter associated domain 347 425 2.2E-22 T 21-04-2016 IPR005170 Transporter-associated domain SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 SUPERFAMILY SSF54631 200 335 1.89E-22 T 21-04-2016 SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 Pfam PF00571 CBS domain 284 333 0.0024 T 21-04-2016 IPR000644 CBS domain SDY_4455 56c4bbc7819299baecb2e7542dad4b17 447 Gene3D G3DSA:3.30.465.10 342 425 1.1E-28 T 21-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SDY_3909 adda86f7fcb0788b86d7c7f03920464e 201 SUPERFAMILY SSF55718 12 111 4.41E-7 T 21-04-2016 IPR003033 SCP2 sterol-binding domain SDY_3909 adda86f7fcb0788b86d7c7f03920464e 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 2.1E-20 T 21-04-2016 IPR003033 SCP2 sterol-binding domain SDY_3909 adda86f7fcb0788b86d7c7f03920464e 201 PANTHER PTHR38693:SF1 1 201 1.1E-73 T 21-04-2016 SDY_3909 adda86f7fcb0788b86d7c7f03920464e 201 PANTHER PTHR38693 1 201 1.1E-73 T 21-04-2016 SDY_4086 271815039cdb758a4f5a49dc35ca4c44 463 PANTHER PTHR11119 1 463 3.5E-287 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_4086 271815039cdb758a4f5a49dc35ca4c44 463 Pfam PF00860 Permease family 34 426 1.2E-111 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_4086 271815039cdb758a4f5a49dc35ca4c44 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 2.8E-142 T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_4086 271815039cdb758a4f5a49dc35ca4c44 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 21-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SDY_4086 271815039cdb758a4f5a49dc35ca4c44 463 PANTHER PTHR11119:SF44 1 463 3.5E-287 T 21-04-2016 SDY_0893 97c3950730c482500df03b8d263116d4 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 47.377 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SDY_0893 97c3950730c482500df03b8d263116d4 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.9E-99 T 21-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SDY_0893 97c3950730c482500df03b8d263116d4 335 PANTHER PTHR38772 2 335 3.4E-186 T 21-04-2016 SDY_2040 76d08c8cacbb14514a6d7679d730e710 179 PANTHER PTHR35603:SF2 1 177 4.9E-99 T 21-04-2016 SDY_2040 76d08c8cacbb14514a6d7679d730e710 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 9.0E-12 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SDY_2040 76d08c8cacbb14514a6d7679d730e710 179 PANTHER PTHR35603 1 177 4.9E-99 T 21-04-2016 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 PANTHER PTHR22773:SF56 1 513 2.7E-251 T 21-04-2016 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 PANTHER PTHR22773 1 513 2.7E-251 T 21-04-2016 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 102 1.3E-5 T 21-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 Pfam PF00361 Proton-conducting membrane transporter 132 425 4.3E-56 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.0E-8 T 21-04-2016 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 1.0E-8 T 21-04-2016 SDY_2675 1ba472fed803c8c2a90a38ed68b5edc0 526 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 1.0E-8 T 21-04-2016 SDY_1149 9d9df6f906930e2b11414fbd947c9a33 200 Gene3D G3DSA:2.30.30.330 7 187 2.3E-46 T 21-04-2016 SDY_1149 9d9df6f906930e2b11414fbd947c9a33 200 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 9 184 9.5E-46 T 21-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SDY_1149 9d9df6f906930e2b11414fbd947c9a33 200 SUPERFAMILY SSF54001 9 185 4.9E-35 T 21-04-2016 SDY_0042 a33a40af025ccceedda683962fa15fd3 266 PANTHER PTHR34611 1 257 2.3E-156 T 21-04-2016 SDY_0042 a33a40af025ccceedda683962fa15fd3 266 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 258 5.5E-73 T 21-04-2016 IPR010106 Conserved hypothetical protein CHP01784 SDY_0042 a33a40af025ccceedda683962fa15fd3 266 PANTHER PTHR34611:SF3 1 257 2.3E-156 T 21-04-2016 SDY_0042 a33a40af025ccceedda683962fa15fd3 266 Pfam PF04754 Putative transposase, YhgA-like 7 207 5.3E-84 T 21-04-2016 IPR006842 Transposase (putative), YhgA-like SDY_4682 bfe8818ab3760c45a431bcd7979120dd 90 PANTHER PTHR33293 1 89 2.9E-18 T 21-04-2016 SDY_4682 bfe8818ab3760c45a431bcd7979120dd 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4682 bfe8818ab3760c45a431bcd7979120dd 90 PANTHER PTHR33293:SF2 1 89 2.9E-18 T 21-04-2016 SDY_4682 bfe8818ab3760c45a431bcd7979120dd 90 Pfam PF03811 InsA N-terminal domain 1 35 1.2E-21 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3049 ec3710bdce58c83c1c423dbf2ef76d99 237 PANTHER PTHR30060:SF1 1 236 1.5E-120 T 21-04-2016 SDY_3049 ec3710bdce58c83c1c423dbf2ef76d99 237 Pfam PF03741 Integral membrane protein TerC family 17 203 2.1E-52 T 21-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SDY_3049 ec3710bdce58c83c1c423dbf2ef76d99 237 PANTHER PTHR30060 1 236 1.5E-120 T 21-04-2016 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 PANTHER PTHR11680:SF9 1 416 0.0 T 21-04-2016 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.323 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 21-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 8.4E-192 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 Gene3D G3DSA:3.40.640.10 37 285 7.0E-111 T 21-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 PANTHER PTHR11680 1 416 0.0 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 PIRSF PIRSF000412 1 417 2.0E-176 T 21-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 Gene3D G3DSA:3.90.1150.10 286 416 1.5E-56 T 21-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SDY_2741 9969b89d3e82f0bf58acafe8f3334430 417 SUPERFAMILY SSF53383 6 416 7.61E-187 T 21-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 Pfam PF16331 TolA binding protein trimerisation 37 111 8.3E-25 T 21-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 SUPERFAMILY SSF48452 139 254 1.84E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 PANTHER PTHR26312:SF74 17 31 2.9E-43 T 21-04-2016 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 PANTHER PTHR26312:SF74 155 263 2.9E-43 T 21-04-2016 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 PANTHER PTHR26312 17 31 2.9E-43 T 21-04-2016 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 PANTHER PTHR26312 155 263 2.9E-43 T 21-04-2016 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 Pfam PF13432 Tetratricopeptide repeat 159 214 8.7E-6 T 21-04-2016 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 Pfam PF13174 Tetratricopeptide repeat 218 250 4.8E-7 T 21-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 Gene3D G3DSA:1.25.40.10 64 255 1.8E-12 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0690 ba77df0cd04bd6cda7c0c4718c648b07 263 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 3.7E-40 T 21-04-2016 IPR014162 Tol-Pal system, YbgF SDY_2863 ed857a00379ff5369c839a4489d8a3d5 113 PANTHER PTHR35893 9 112 4.3E-53 T 21-04-2016 SDY_2863 ed857a00379ff5369c839a4489d8a3d5 113 Pfam PF05957 Bacterial protein of unknown function (DUF883) 20 111 7.3E-26 T 21-04-2016 IPR010279 Protein of unknown function DUF883, ElaB SDY_2863 ed857a00379ff5369c839a4489d8a3d5 113 PANTHER PTHR35893:SF3 9 112 4.3E-53 T 21-04-2016 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 SUPERFAMILY SSF53649 4 387 1.74E-73 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 SUPERFAMILY SSF53649 441 481 1.74E-73 T 21-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 Gene3D G3DSA:3.30.1120.10 443 483 1.5E-4 T 21-04-2016 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 Gene3D G3DSA:3.30.1120.10 376 389 1.5E-4 T 21-04-2016 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 Gene3D G3DSA:3.40.720.10 4 375 1.7E-59 T 21-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 PANTHER PTHR10342:SF207 4 486 4.9E-83 T 21-04-2016 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 Pfam PF00884 Sulfatase 4 334 2.4E-32 T 21-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SDY_2123 09473f473ed9e8fc39a27c39f5eefc14 493 PANTHER PTHR10342 4 486 4.9E-83 T 21-04-2016 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 90 1.2E-26 T 21-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 3.2E-17 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 PANTHER PTHR30505 2 108 1.5E-28 T 21-04-2016 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 PANTHER PTHR30505:SF0 2 108 1.5E-28 T 21-04-2016 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 SUPERFAMILY SSF52794 4 101 3.14E-29 T 21-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SDY_2586 742b7f3e25ec7bf05848ac1cd893f220 108 Gene3D G3DSA:3.40.50.2300 2 102 3.1E-35 T 21-04-2016 SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 Gene3D G3DSA:2.40.50.140 4 178 9.7E-61 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 Pfam PF00436 Single-strand binding protein family 6 112 8.5E-43 T 21-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 PANTHER PTHR10302 4 178 9.9E-58 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.014 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 PIRSF PIRSF002070 2 161 2.1E-41 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 SUPERFAMILY SSF50249 4 178 1.37E-63 T 21-04-2016 IPR012340 Nucleic acid-binding, OB-fold SDY_4508 b20bad03c4d47afa761e17461b4526c1 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 3.9E-62 T 21-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SDY_1717 3ecc229e111a2dda5f13f13566d72467 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 6.8E-29 T 21-04-2016 IPR005371 Uncharacterised protein family UPF0181 SDY_1717 3ecc229e111a2dda5f13f13566d72467 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-20 T 21-04-2016 IPR005371 Uncharacterised protein family UPF0181 SDY_1717 3ecc229e111a2dda5f13f13566d72467 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.866 T 21-04-2016 IPR005371 Uncharacterised protein family UPF0181 SDY_0354 a8a12fdc2984ecf6fd5b3e83698b6fc1 63 Pfam PF16362 YaiA protein 1 63 1.5E-38 T 21-04-2016 IPR032303 YaiA protein SDY_4492 58bf7fb28c6d0e689a1a422ee890d6d6 114 Pfam PF13708 Domain of unknown function (DUF4942) 59 114 1.0E-13 T 21-04-2016 IPR031339 Domain of unknown function DUF4942 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 PANTHER PTHR30579:SF2 1 296 3.6E-160 T 21-04-2016 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.4E-19 T 21-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF03466 LysR substrate binding domain 93 288 1.2E-11 T 21-04-2016 IPR005119 LysR, substrate-binding SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF53850 92 289 1.57E-18 T 21-04-2016 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF46785 4 110 7.37E-18 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 PANTHER PTHR30579 1 296 3.6E-160 T 21-04-2016 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:1.10.10.10 1 73 6.9E-21 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.997 T 21-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:3.40.190.10 92 196 1.5E-38 T 21-04-2016 SDY_3165 83bddd0a987410c35d7911df4a93d36f 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 9.4E-113 T 21-04-2016 IPR017685 HTH-type transcriptional regulator ArgP SDY_0580 ddf1df48917b5391dff66802f566d069 201 Pfam PF07105 Protein of unknown function (DUF1367) 1 191 2.5E-80 T 21-04-2016 IPR009797 Protein of unknown function DUF1367 SDY_P059 ac215175e61e1f8dd65b52147ed7a935 42 SUPERFAMILY SSF52335 3 42 1.7E-10 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_P059 ac215175e61e1f8dd65b52147ed7a935 42 Pfam PF02142 MGS-like domain 7 37 9.3E-7 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_P059 ac215175e61e1f8dd65b52147ed7a935 42 Gene3D G3DSA:3.40.50.1380 2 42 7.2E-11 T 21-04-2016 IPR011607 Methylglyoxal synthase-like domain SDY_3871 8ab75953c0bd8dedbec539f196cf5d5c 448 PANTHER PTHR37529 4 446 2.8E-83 T 21-04-2016 SDY_3871 8ab75953c0bd8dedbec539f196cf5d5c 448 SUPERFAMILY SSF53098 117 419 2.96E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_3871 8ab75953c0bd8dedbec539f196cf5d5c 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 9.1E-31 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_3871 8ab75953c0bd8dedbec539f196cf5d5c 448 Pfam PF01609 Transposase DDE domain 134 358 4.9E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 9.0E-47 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 PIRSF PIRSF004916 1 109 2.4E-58 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 1.0E-53 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 Gene3D G3DSA:3.10.450.140 9 109 5.0E-51 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 SUPERFAMILY SSF102816 3 109 7.32E-51 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_1306 b7cf7c24afbdd6b77a39a81d93ce65da 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.934 T 21-04-2016 IPR007376 dsDNA mimic, putative SDY_3388 52645e10ffc4dd7a110157eaf8d3b719 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 1.5E-60 T 21-04-2016 IPR019647 PhoP regulatory network protein YrbL SDY_3388 52645e10ffc4dd7a110157eaf8d3b719 210 SUPERFAMILY SSF56112 13 158 4.25E-8 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_1187 306d83d3c42141067893f8dc55b972e6 237 Gene3D G3DSA:3.30.420.10 66 226 9.0E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1187 306d83d3c42141067893f8dc55b972e6 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_1187 306d83d3c42141067893f8dc55b972e6 237 PANTHER PTHR32552 2 229 2.1E-63 T 21-04-2016 SDY_1187 306d83d3c42141067893f8dc55b972e6 237 Pfam PF00665 Integrase core domain 72 186 2.0E-25 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1187 306d83d3c42141067893f8dc55b972e6 237 SUPERFAMILY SSF53098 65 233 3.19E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4636a 641b094eec9c13e543b311f76ec6fb3d 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 19.041 T 21-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 SDY_4636a 641b094eec9c13e543b311f76ec6fb3d 53 PIRSF PIRSF036466 1 53 8.3E-21 T 21-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 SDY_4636a 641b094eec9c13e543b311f76ec6fb3d 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.0E-13 T 21-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 SDY_0211 2048433dab5cbe6dd6e4e820142d89fe 236 Pfam PF17185 NlpE C-terminal OB domain 144 232 7.4E-34 T 21-04-2016 IPR033450 NlpE, C-terminal OB domain SDY_0211 2048433dab5cbe6dd6e4e820142d89fe 236 Pfam PF04170 NlpE N-terminal domain 45 130 5.7E-27 T 21-04-2016 IPR007298 Copper resistance lipoprotein NlpE SDY_2061 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SDY_2061 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SDY_2061 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SDY_2061 211eeaac246f953b67ca2ccd0477fe3b 57 PANTHER PTHR35534 1 57 5.6E-28 T 21-04-2016 SDY_2061 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 21-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SDY_2241 45ab16b3a6c72841f0bb499f63be0def 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 3.2E-91 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_2241 45ab16b3a6c72841f0bb499f63be0def 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.716 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_2241 45ab16b3a6c72841f0bb499f63be0def 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 5.8E-54 T 21-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SDY_2241 45ab16b3a6c72841f0bb499f63be0def 247 PANTHER PTHR34148:SF1 1 247 1.2E-59 T 21-04-2016 SDY_2241 45ab16b3a6c72841f0bb499f63be0def 247 PANTHER PTHR34148 1 247 1.2E-59 T 21-04-2016 SDY_0215 0ea44a49b70285717a7432533a30b5a1 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 36.266 T 21-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 SDY_0215 0ea44a49b70285717a7432533a30b5a1 134 Pfam PF16358 RcsF lipoprotein 29 132 7.6E-50 T 21-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Pfam PF11924 Invasin beta-domain of outer membrane 1 85 8.0E-28 T 21-04-2016 IPR024519 Invasin beta-domain of outer membrane SDY_4137 30c44947aa315cf034f4e4476e809e87 504 SMART SM00634 404 496 2.1E-11 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 SMART SM00634 199 288 0.43 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Pfam PF02369 Bacterial Ig-like domain (group 1) 408 494 1.1E-11 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 SUPERFAMILY SSF49373 295 375 3.66E-7 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_4137 30c44947aa315cf034f4e4476e809e87 504 SUPERFAMILY SSF49373 409 498 2.83E-14 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Gene3D G3DSA:2.60.40.920 295 381 7.1E-14 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Gene3D G3DSA:2.60.40.920 196 293 2.9E-18 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 SUPERFAMILY SSF49373 196 291 2.16E-23 T 21-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SDY_4137 30c44947aa315cf034f4e4476e809e87 504 PANTHER PTHR39576 1 265 1.8E-48 T 21-04-2016 SDY_4137 30c44947aa315cf034f4e4476e809e87 504 PANTHER PTHR39576:SF2 1 265 1.8E-48 T 21-04-2016 SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Gene3D G3DSA:2.60.40.920 402 498 2.0E-16 T 21-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SDY_4137 30c44947aa315cf034f4e4476e809e87 504 Pfam PF09134 Invasin, domain 3 199 295 8.5E-18 T 21-04-2016 IPR015217 Invasin, domain 3 SDY_4461 5b0045c277da925555f72981611dd9f7 116 PANTHER PTHR33988 2 116 7.8E-48 T 21-04-2016 SDY_4461 5b0045c277da925555f72981611dd9f7 116 SUPERFAMILY SSF50118 7 114 1.37E-24 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_4461 5b0045c277da925555f72981611dd9f7 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 114 1.7E-20 T 21-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SDY_4461 5b0045c277da925555f72981611dd9f7 116 Gene3D G3DSA:2.30.30.110 8 115 6.8E-29 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_4461 5b0045c277da925555f72981611dd9f7 116 PANTHER PTHR33988:SF3 2 116 7.8E-48 T 21-04-2016 SDY_4314 c875e788e57e85cfa031904fb704e00d 73 PANTHER PTHR33799:SF3 1 70 4.1E-20 T 21-04-2016 SDY_4314 c875e788e57e85cfa031904fb704e00d 73 Gene3D G3DSA:3.40.35.10 1 67 1.0E-16 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_4314 c875e788e57e85cfa031904fb704e00d 73 SUPERFAMILY SSF52728 2 68 6.54E-15 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_4314 c875e788e57e85cfa031904fb704e00d 73 PANTHER PTHR33799 1 70 4.1E-20 T 21-04-2016 SDY_4314 c875e788e57e85cfa031904fb704e00d 73 Pfam PF03830 PTS system sorbose subfamily IIB component 1 58 3.6E-12 T 21-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SDY_1618 8fcde6f744aef5f952e757cf0e351be6 142 PANTHER PTHR35037:SF1 1 123 1.3E-60 T 21-04-2016 SDY_1618 8fcde6f744aef5f952e757cf0e351be6 142 PANTHER PTHR35037 1 123 1.3E-60 T 21-04-2016 SDY_4066 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 21-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4066 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4066 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4066 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 21-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_4066 527e433349d66445e6c1224986f9ef24 55 PANTHER PTHR15238 1 55 1.5E-25 T 21-04-2016 SDY_4066 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 21-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 Gene3D G3DSA:3.40.50.720 1 179 6.3E-54 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 PANTHER PTHR10366 2 336 1.1E-150 T 21-04-2016 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 9.4E-66 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 PANTHER PTHR10366:SF39 2 336 1.1E-150 T 21-04-2016 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 Gene3D G3DSA:3.90.25.10 180 232 8.3E-51 T 21-04-2016 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 Gene3D G3DSA:3.90.25.10 264 337 8.3E-51 T 21-04-2016 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.1E-149 T 21-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SDY_0706 b1bbbf11d12a3616f8b733a3fd33cfdc 338 SUPERFAMILY SSF51735 1 336 4.23E-101 T 21-04-2016 IPR016040 NAD(P)-binding domain SDY_1114 5be54364039f5ac00681bd18ff2efbbc 107 Pfam PF13992 YecR-like lipoprotein 27 98 7.5E-28 T 21-04-2016 IPR025731 YecR-like lipoprotein SDY_1938 f54267821097bf2da5d53969cd3631b0 119 PANTHER PTHR33885 1 119 6.7E-38 T 21-04-2016 SDY_1938 f54267821097bf2da5d53969cd3631b0 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.4E-40 T 21-04-2016 IPR014320 Phage shock protein, PspC SDY_1938 f54267821097bf2da5d53969cd3631b0 119 Pfam PF04024 PspC domain 8 65 2.7E-15 T 21-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.9E-66 T 21-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 162 45.923 T 21-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 Gene3D G3DSA:1.10.10.10 1 134 6.1E-31 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 21-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 SUPERFAMILY SSF46785 2 133 6.18E-36 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 PANTHER PTHR33221 2 152 3.7E-74 T 21-04-2016 SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 Pfam PF02082 Transcriptional regulator 1 83 2.7E-27 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.4E-47 T 21-04-2016 IPR000944 Transcription regulator Rrf2-type SDY_2727 de6f99239b4941ac1360cd737b466eb9 162 PANTHER PTHR33221:SF1 2 152 3.7E-74 T 21-04-2016 SDY_1192 b72fcf61d86f6ef4e9e3b2c590f97a21 142 PIRSF PIRSF006276 1 141 1.0E-44 T 21-04-2016 IPR006015 Universal stress protein A SDY_1192 b72fcf61d86f6ef4e9e3b2c590f97a21 142 SUPERFAMILY SSF52402 3 138 1.26E-24 T 21-04-2016 SDY_1192 b72fcf61d86f6ef4e9e3b2c590f97a21 142 Pfam PF00582 Universal stress protein family 3 138 1.5E-16 T 21-04-2016 IPR006016 UspA GO:0006950 SDY_1192 b72fcf61d86f6ef4e9e3b2c590f97a21 142 Gene3D G3DSA:3.40.50.620 3 138 5.4E-25 T 21-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SDY_0912 e1b3ab40c495161f97d7af8489a1cbce 277 Pfam PF00577 Outer membrane usher protein 13 188 1.3E-53 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_0912 e1b3ab40c495161f97d7af8489a1cbce 277 PANTHER PTHR30451 15 277 1.5E-133 T 21-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 SDY_0912 e1b3ab40c495161f97d7af8489a1cbce 277 Pfam PF13953 PapC C-terminal domain 198 262 8.6E-19 T 21-04-2016 IPR025949 PapC-like, C-terminal domain SDY_0912 e1b3ab40c495161f97d7af8489a1cbce 277 PANTHER PTHR30451:SF2 15 277 1.5E-133 T 21-04-2016 SDY_1723 7efb61db7da330da938065eee36804f4 103 SMART SM00345 16 74 5.4E-16 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_1723 7efb61db7da330da938065eee36804f4 103 SUPERFAMILY SSF46785 6 78 2.72E-12 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1723 7efb61db7da330da938065eee36804f4 103 Gene3D G3DSA:1.10.10.10 4 74 1.1E-14 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_1723 7efb61db7da330da938065eee36804f4 103 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.2E-11 T 21-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 Gene3D G3DSA:3.10.50.40 130 145 1.8E-20 T 21-04-2016 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 Gene3D G3DSA:3.10.50.40 3 80 1.8E-20 T 21-04-2016 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 SUPERFAMILY SSF54534 5 143 1.18E-36 T 21-04-2016 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 PANTHER PTHR10516 1 77 6.2E-29 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 PANTHER PTHR10516 133 146 6.2E-29 T 21-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.6E-15 T 21-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 PANTHER PTHR10516:SF329 1 77 6.2E-29 T 21-04-2016 SDY_0050 5829ee5e140952c401efaf97a5c538e0 149 PANTHER PTHR10516:SF329 133 146 6.2E-29 T 21-04-2016 SDY_4817 726b633075f6dfcdf7a41dcd8f784b0b 98 PANTHER PTHR33293 1 84 7.5E-19 T 21-04-2016 SDY_4817 726b633075f6dfcdf7a41dcd8f784b0b 98 Pfam PF03811 InsA N-terminal domain 1 35 1.2E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4817 726b633075f6dfcdf7a41dcd8f784b0b 98 Pfam PF12759 InsA C-terminal domain 42 85 7.2E-29 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4817 726b633075f6dfcdf7a41dcd8f784b0b 98 PANTHER PTHR33293:SF2 1 84 7.5E-19 T 21-04-2016 SDY_3159 a662bcf101235224438618fb5a38c7ab 211 PANTHER PTHR30086 1 207 2.6E-106 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3159 a662bcf101235224438618fb5a38c7ab 211 Pfam PF01810 LysE type translocator 14 201 3.4E-57 T 21-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SDY_3159 a662bcf101235224438618fb5a38c7ab 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 9.4E-73 T 21-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 SDY_3159 a662bcf101235224438618fb5a38c7ab 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.578 T 21-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 SDY_3159 a662bcf101235224438618fb5a38c7ab 211 PANTHER PTHR30086:SF0 1 207 2.6E-106 T 21-04-2016 SDY_4211 223712b47366be7b1063b06130f7881b 202 SUPERFAMILY SSF52833 1 100 1.28E-18 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4211 223712b47366be7b1063b06130f7881b 202 SUPERFAMILY SSF47616 73 199 3.55E-15 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_4211 223712b47366be7b1063b06130f7881b 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 5.1E-13 T 21-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 SDY_4211 223712b47366be7b1063b06130f7881b 202 PANTHER PTHR11260:SF256 1 200 3.5E-120 T 21-04-2016 SDY_4211 223712b47366be7b1063b06130f7881b 202 Gene3D G3DSA:1.20.1050.10 90 197 2.4E-12 T 21-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SDY_4211 223712b47366be7b1063b06130f7881b 202 Gene3D G3DSA:3.40.30.10 1 89 1.7E-20 T 21-04-2016 IPR012336 Thioredoxin-like fold SDY_4211 223712b47366be7b1063b06130f7881b 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 2.1E-11 T 21-04-2016 IPR004046 Glutathione S-transferase, C-terminal SDY_4211 223712b47366be7b1063b06130f7881b 202 PANTHER PTHR11260 1 200 3.5E-120 T 21-04-2016 SDY_2418 0e5ee1057873eb1d77bab28254d6a37c 262 SUPERFAMILY SSF53098 65 229 9.26E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2418 0e5ee1057873eb1d77bab28254d6a37c 262 Pfam PF00665 Integrase core domain 72 186 5.4E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2418 0e5ee1057873eb1d77bab28254d6a37c 262 Gene3D G3DSA:3.30.420.10 66 226 4.6E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2418 0e5ee1057873eb1d77bab28254d6a37c 262 PANTHER PTHR32552 2 235 2.4E-63 T 21-04-2016 SDY_2418 0e5ee1057873eb1d77bab28254d6a37c 262 Pfam PF13276 HTH-like domain 5 47 8.4E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_4140 f68c599330592f991f369a9661ca6170 125 PANTHER PTHR33293 1 124 1.9E-42 T 21-04-2016 SDY_4140 f68c599330592f991f369a9661ca6170 125 Pfam PF03400 IS1 transposase 1 125 6.7E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 3.7E-145 T 21-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 PANTHER PTHR10314 5 317 8.2E-169 T 21-04-2016 SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 SUPERFAMILY SSF53686 7 326 1.83E-84 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 315 3.8E-54 T 21-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 Gene3D G3DSA:3.40.50.1100 112 325 9.8E-67 T 21-04-2016 SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 PIRSF PIRSF006278 2 328 6.2E-92 T 21-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 80.513 T 21-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 SDY_1098 66529456e80c907cc3ba0e48de49b79c 328 PANTHER PTHR10314:SF105 5 317 8.2E-169 T 21-04-2016 SDY_3333 e9de5f87e5af6632f5acd6f065dd968b 147 Gene3D G3DSA:2.30.110.10 28 140 5.7E-6 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_3333 e9de5f87e5af6632f5acd6f065dd968b 147 SUPERFAMILY SSF50475 7 138 2.05E-13 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_3333 e9de5f87e5af6632f5acd6f065dd968b 147 PIRSF PIRSF009554 1 145 5.8E-62 T 21-04-2016 IPR011194 Uncharacterised protein family UPF0306 SDY_3333 e9de5f87e5af6632f5acd6f065dd968b 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 36.042 T 21-04-2016 IPR011194 Uncharacterised protein family UPF0306 SDY_2929 474cb1e658e2ede9f577f5458fab94f7 237 Pfam PF13276 HTH-like domain 5 47 2.0E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_2929 474cb1e658e2ede9f577f5458fab94f7 237 Gene3D G3DSA:3.30.420.10 66 226 1.3E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2929 474cb1e658e2ede9f577f5458fab94f7 237 SUPERFAMILY SSF53098 65 229 1.67E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2929 474cb1e658e2ede9f577f5458fab94f7 237 Pfam PF00665 Integrase core domain 72 186 4.2E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_2929 474cb1e658e2ede9f577f5458fab94f7 237 PANTHER PTHR32552 2 235 7.2E-64 T 21-04-2016 SDY_1477 4cab4debed77a813d4b184276a4d2317 117 SUPERFAMILY SSF103473 6 87 1.83E-9 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1477 4cab4debed77a813d4b184276a4d2317 117 Gene3D G3DSA:1.20.1250.20 7 85 5.2E-9 T 21-04-2016 SDY_1477 4cab4debed77a813d4b184276a4d2317 117 PANTHER PTHR23514 1 113 2.5E-83 T 21-04-2016 SDY_1477 4cab4debed77a813d4b184276a4d2317 117 PANTHER PTHR23514:SF9 1 113 2.5E-83 T 21-04-2016 SDY_4138 c602a8b8257f9f817ab5e42ef62224e6 160 Pfam PF11924 Invasin beta-domain of outer membrane 33 158 6.6E-38 T 21-04-2016 IPR024519 Invasin beta-domain of outer membrane SDY_4138 c602a8b8257f9f817ab5e42ef62224e6 160 PANTHER PTHR32093:SF0 3 160 3.9E-53 T 21-04-2016 SDY_4138 c602a8b8257f9f817ab5e42ef62224e6 160 PANTHER PTHR32093 3 160 3.9E-53 T 21-04-2016 SDY_4784 95ff00fe5c5ab97dbd21c3660486846a 90 PANTHER PTHR33293:SF2 1 89 1.4E-20 T 21-04-2016 SDY_4784 95ff00fe5c5ab97dbd21c3660486846a 90 Pfam PF03811 InsA N-terminal domain 1 35 6.2E-24 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4784 95ff00fe5c5ab97dbd21c3660486846a 90 Pfam PF12759 InsA C-terminal domain 42 87 3.1E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4784 95ff00fe5c5ab97dbd21c3660486846a 90 PANTHER PTHR33293 1 89 1.4E-20 T 21-04-2016 SDY_3839 b9dc66d7572bd9ca5f7bb891c4f44f4f 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 2.8E-114 T 21-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 SDY_3839 b9dc66d7572bd9ca5f7bb891c4f44f4f 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 1.8E-215 T 21-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 SDY_3839 b9dc66d7572bd9ca5f7bb891c4f44f4f 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.094 T 21-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 SDY_2160 a023eea6c17e5d588250d77e4f6ac1d8 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 239 3.5E-21 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2160 a023eea6c17e5d588250d77e4f6ac1d8 243 Gene3D G3DSA:1.10.3720.10 8 240 2.6E-28 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2160 a023eea6c17e5d588250d77e4f6ac1d8 243 SUPERFAMILY SSF161098 46 233 2.22E-30 T 21-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SDY_2160 a023eea6c17e5d588250d77e4f6ac1d8 243 PANTHER PTHR30177:SF11 1 242 3.0E-142 T 21-04-2016 SDY_2160 a023eea6c17e5d588250d77e4f6ac1d8 243 PANTHER PTHR30177 1 242 3.0E-142 T 21-04-2016 SDY_2260 77c54e8dd02b8bf10b654ceb84163105 110 PIRSF PIRSF007004 1 110 1.9E-75 T 21-04-2016 IPR016501 Uncharacterised conserved protein UCP007004 SDY_2792 b644ac8de75ebb1b1467a5328f5c3e8d 158 PANTHER PTHR12901:SF7 8 155 3.1E-67 T 21-04-2016 SDY_2792 b644ac8de75ebb1b1467a5328f5c3e8d 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 1.6E-31 T 21-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SDY_2792 b644ac8de75ebb1b1467a5328f5c3e8d 158 SUPERFAMILY SSF55961 14 156 3.17E-34 T 21-04-2016 SDY_2792 b644ac8de75ebb1b1467a5328f5c3e8d 158 Gene3D G3DSA:3.30.530.20 14 155 5.2E-49 T 21-04-2016 IPR023393 START-like domain SDY_2792 b644ac8de75ebb1b1467a5328f5c3e8d 158 PANTHER PTHR12901 8 155 3.1E-67 T 21-04-2016 SDY_4306 80c54f74d886bb277982059e7a1e8aa4 144 Pfam PF11682 Probable zinc-ribbon 2 126 2.0E-72 T 21-04-2016 IPR021696 Protein of unknown function DUF3279 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 Gene3D G3DSA:3.40.50.450 125 452 1.3E-123 T 21-04-2016 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 SUPERFAMILY SSF102405 118 330 1.53E-41 T 21-04-2016 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 PANTHER PTHR31223:SF12 359 384 1.8E-195 T 21-04-2016 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 PANTHER PTHR31223 359 384 1.8E-195 T 21-04-2016 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 Pfam PF03641 Possible lysine decarboxylase 190 329 6.6E-33 T 21-04-2016 IPR031100 LOG family SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.5E-46 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 Gene3D G3DSA:3.30.1850.10 2 113 7.5E-54 T 21-04-2016 IPR027820 Domain of unknown function DUF4478 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 PANTHER PTHR31223 83 342 1.8E-195 T 21-04-2016 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.1E-55 T 21-04-2016 IPR021826 Protein of unknown function DUF3412 SDY_3012 41ceb4b8224e415c4fa0286050b57569 454 PANTHER PTHR31223:SF12 83 342 1.8E-195 T 21-04-2016 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 4 205 8.2E-92 T 21-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 SUPERFAMILY SSF103473 6 202 1.15E-15 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 PANTHER PTHR11328:SF36 1 210 6.1E-177 T 21-04-2016 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 Gene3D G3DSA:1.20.1250.20 8 195 5.4E-15 T 21-04-2016 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 Pfam PF13347 MFS/sugar transport protein 6 200 8.9E-52 T 21-04-2016 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 55 80 - T 21-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 SDY_4091 02ce2de128bc40f9035bc29967d0ead0 211 PANTHER PTHR11328 1 210 6.1E-177 T 21-04-2016 SDY_1891 7b86552e1b38eb2e8d4c792087b755c2 418 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 99 159 1.5E-20 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1891 7b86552e1b38eb2e8d4c792087b755c2 418 Gene3D G3DSA:2.160.20.20 11 393 1.3E-12 T 21-04-2016 IPR012332 P22 tailspike C-terminal domain-like SDY_1891 7b86552e1b38eb2e8d4c792087b755c2 418 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 149 179 5.9E-5 T 21-04-2016 IPR030930 Adhesin of bacterial autotransporter system SDY_1891 7b86552e1b38eb2e8d4c792087b755c2 418 Pfam PF03212 Pertactin 336 403 1.3E-4 T 21-04-2016 IPR004899 Pertactin, central region SDY_1891 7b86552e1b38eb2e8d4c792087b755c2 418 SUPERFAMILY SSF51126 39 394 4.71E-11 T 21-04-2016 IPR011050 Pectin lyase fold/virulence factor SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PANTHER PTHR11732:SF100 1 246 4.1E-164 T 21-04-2016 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 21-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 Gene3D G3DSA:3.20.20.100 1 244 1.8E-84 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.4E-45 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.4E-45 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.4E-45 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.4E-45 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.4E-45 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PANTHER PTHR11732 1 246 4.1E-164 T 21-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 PIRSF PIRSF000097 1 249 6.0E-64 T 21-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 21-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 SUPERFAMILY SSF51430 2 245 1.19E-79 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_0226 9873e4db7ccd9a398a2bfa2cec4fbdda 255 Pfam PF00248 Aldo/keto reductase family 9 243 2.5E-50 T 21-04-2016 IPR023210 NADP-dependent oxidoreductase domain SDY_2087 216938572ab9cf8a1c3e3b7897df86d3 131 Pfam PF03400 IS1 transposase 2 131 1.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2087 216938572ab9cf8a1c3e3b7897df86d3 131 PANTHER PTHR33293 4 126 3.2E-22 T 21-04-2016 SDY_2066 ed7c003e70f3b833ae2f4b14ed3814fc 124 ProDom PD078424 YCEQ 26 100 6.0E-40 T 21-04-2016 IPR020371 Uncharacterised protein family YceQ SDY_2066 ed7c003e70f3b833ae2f4b14ed3814fc 124 Pfam PF10848 Protein of unknown function (DUF2655) 19 100 4.1E-61 T 21-04-2016 IPR020371 Uncharacterised protein family YceQ SDY_3918 a68c074424785422598e863dd11655ae 340 Pfam PF12146 Serine aminopeptidase, S33 52 312 1.8E-57 T 21-04-2016 IPR022742 Serine aminopeptidase, S33 SDY_3918 a68c074424785422598e863dd11655ae 340 PANTHER PTHR11614:SF100 11 340 4.2E-176 T 21-04-2016 SDY_3918 a68c074424785422598e863dd11655ae 340 Gene3D G3DSA:3.40.50.1820 29 329 1.6E-28 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3918 a68c074424785422598e863dd11655ae 340 PANTHER PTHR11614 11 340 4.2E-176 T 21-04-2016 SDY_3918 a68c074424785422598e863dd11655ae 340 SUPERFAMILY SSF53474 17 329 2.44E-33 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0453 1074e191cece87d47b19a397cbe1d50a 54 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 8.2E-24 T 21-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related SDY_2547 587ee9710935418ed62b4a2ea2bbf6d6 94 Pfam PF03400 IS1 transposase 35 84 1.1E-19 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4222 ea8c0d748b8851e307dded14ffe3c860 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 2.0E-28 T 21-04-2016 IPR025858 Exopolysaccharide production protein YjbE SDY_4450 f2caf0f4147c313c19fc3f95cfd163ba 128 Pfam PF13698 Domain of unknown function (DUF4156) 34 126 5.0E-33 T 21-04-2016 IPR025294 Protein of unknown function DUF4156 SDY_3542 16989c500ecc2f747019c96cb2023ed0 190 PANTHER PTHR34989:SF1 1 190 9.0E-39 T 21-04-2016 SDY_3542 16989c500ecc2f747019c96cb2023ed0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 4.6E-8 T 21-04-2016 IPR005325 Protein of unknown function DUF308, membrane SDY_3542 16989c500ecc2f747019c96cb2023ed0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 27 97 5.2E-12 T 21-04-2016 IPR005325 Protein of unknown function DUF308, membrane SDY_3542 16989c500ecc2f747019c96cb2023ed0 190 PANTHER PTHR34989 1 190 9.0E-39 T 21-04-2016 SDY_0581 f589d17b88eeed910239dfe01782e452 95 PIRSF PIRSF004509 1 86 3.3E-54 T 21-04-2016 IPR016418 Uncharacterised conserved protein UCP004509, Rem SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 PANTHER PTHR34501 11 102 1.1E-59 T 21-04-2016 SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 PANTHER PTHR34501:SF1 11 102 1.1E-59 T 21-04-2016 SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 Pfam PF00267 Gram-negative porin 1 102 7.6E-41 T 21-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 SUPERFAMILY SSF56935 5 102 4.97E-21 T 21-04-2016 SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 54 70 - T 21-04-2016 IPR013793 Porin, Gram-negative type, conserved site SDY_1663 3eb0e5e9d53ff46a7d1d4b131a4e5eab 102 Gene3D G3DSA:2.40.160.10 6 102 1.1E-25 T 21-04-2016 IPR023614 Porin domain SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 SUPERFAMILY SSF54189 8 97 5.4E-30 T 21-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.603 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 Pfam PF00276 Ribosomal protein L23 9 95 6.0E-31 T 21-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 Gene3D G3DSA:3.30.70.330 8 98 4.9E-34 T 21-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 PANTHER PTHR11620 9 95 1.1E-33 T 21-04-2016 SDY_3494 f9f4579008bddf3c0a8adc524542f53a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 21-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SDY_4476 59fb07ecef260aeb8fcd7f5446fa6fb2 131 Pfam PF03400 IS1 transposase 2 131 4.6E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4476 59fb07ecef260aeb8fcd7f5446fa6fb2 131 PANTHER PTHR33293 4 126 2.0E-23 T 21-04-2016 SDY_1655 6dbb2a36f3d9bc9b971322267aa17743 203 Pfam PF00797 N-acetyltransferase 1 178 7.6E-56 T 21-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SDY_1655 6dbb2a36f3d9bc9b971322267aa17743 203 PANTHER PTHR11786 1 178 6.0E-46 T 21-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SDY_1655 6dbb2a36f3d9bc9b971322267aa17743 203 SUPERFAMILY SSF54001 1 191 2.7E-55 T 21-04-2016 SDY_1655 6dbb2a36f3d9bc9b971322267aa17743 203 PANTHER PTHR11786:SF0 1 178 6.0E-46 T 21-04-2016 SDY_1655 6dbb2a36f3d9bc9b971322267aa17743 203 Gene3D G3DSA:3.30.2140.10 104 181 1.0E-14 T 21-04-2016 SDY_4500 289320f2efa1b5bab1d4a56650a6ed6d 125 PANTHER PTHR33293 1 124 1.4E-42 T 21-04-2016 SDY_4500 289320f2efa1b5bab1d4a56650a6ed6d 125 Pfam PF03400 IS1 transposase 1 125 4.8E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4616 9aef9cb8db9222941cab73b4c9addb1a 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 44.268 T 21-04-2016 IPR020917 Primosomal protein 1 GO:0006260 SDY_0363 c76ce9239994c974d960712a53c83ac3 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 8.9E-31 T 21-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 SDY_0363 c76ce9239994c974d960712a53c83ac3 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 26.049 T 21-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 Gene3D G3DSA:3.30.830.10 25 252 9.9E-22 T 21-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 SUPERFAMILY SSF63411 29 239 2.79E-24 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 Pfam PF00675 Insulinase (Peptidase family M16) 46 164 7.7E-6 T 21-04-2016 IPR011765 Peptidase M16, N-terminal SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 Pfam PF05193 Peptidase M16 inactive domain 201 377 1.9E-18 T 21-04-2016 IPR007863 Peptidase M16, C-terminal SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 PANTHER PTHR11851:SF136 1 491 7.6E-84 T 21-04-2016 SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 SUPERFAMILY SSF63411 322 457 4.54E-6 T 21-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SDY_4547 5c48c9134b7c3ee082766a471d6d9b1d 498 PANTHER PTHR11851 1 491 7.6E-84 T 21-04-2016 SDY_3041 c84f14bb933c2e36f462a5963e1f23f6 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 5.0E-33 T 21-04-2016 IPR019652 Protein of unknown function DUF2509 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 PANTHER PTHR32438 56 561 3.0E-295 T 21-04-2016 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 PANTHER PTHR32438 580 691 3.0E-295 T 21-04-2016 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 Gene3D G3DSA:3.20.20.80 140 573 9.6E-164 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 Gene3D G3DSA:3.20.20.80 612 686 9.6E-164 T 21-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 100 685 1.0E-302 T 21-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 PANTHER PTHR32438:SF5 56 561 3.0E-295 T 21-04-2016 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 PANTHER PTHR32438:SF5 580 691 3.0E-295 T 21-04-2016 SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 SUPERFAMILY SSF51445 142 570 1.55E-146 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 SUPERFAMILY SSF51445 608 681 1.55E-146 T 21-04-2016 IPR017853 Glycoside hydrolase superfamily SDY_3660 bd6f49ec9f12b0c22564d88c285f6fb8 694 Pfam PF02446 4-alpha-glucanotransferase 148 664 1.2E-130 T 21-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SDY_4665 c67ec596d13509be607e768de5c7c693 90 PANTHER PTHR33293 1 89 1.6E-21 T 21-04-2016 SDY_4665 c67ec596d13509be607e768de5c7c693 90 Pfam PF12759 InsA C-terminal domain 42 87 1.5E-31 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4665 c67ec596d13509be607e768de5c7c693 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4665 c67ec596d13509be607e768de5c7c693 90 PANTHER PTHR33293:SF2 1 89 1.6E-21 T 21-04-2016 SDY_2121 2aababa59d69886ae3aada610a435195 360 Pfam PF06381 Protein of unknown function (DUF1073) 2 275 4.0E-84 T 21-04-2016 IPR024459 Protein of unknown function DUF1073 SDY_1262 bfb7c5e864fd9ae629281b04584660ce 130 PIRSF PIRSF005610 1 125 9.1E-19 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB SDY_1262 bfb7c5e864fd9ae629281b04584660ce 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 1.3E-34 T 21-04-2016 IPR007360 Invasion gene expression up-regulator, SirB SDY_1262 bfb7c5e864fd9ae629281b04584660ce 130 PANTHER PTHR39594 1 130 5.7E-47 T 21-04-2016 SDY_1866 557d366d9b3b52f7ea6986f2ac7bac18 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 1.4E-13 T 21-04-2016 IPR012451 Protein of unknown function DUF1656 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 SUPERFAMILY SSF51283 1 193 1.44E-59 T 21-04-2016 IPR029054 dUTPase-like SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 Gene3D G3DSA:2.70.40.10 1 192 1.1E-60 T 21-04-2016 IPR029054 dUTPase-like SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 Pfam PF00692 dUTPase 78 185 6.6E-9 T 21-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-67 T 21-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.266 T 21-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241:SF1 77 192 2.6E-68 T 21-04-2016 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241:SF1 1 58 2.6E-68 T 21-04-2016 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241 77 192 2.6E-68 T 21-04-2016 SDY_2197 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241 1 58 2.6E-68 T 21-04-2016 SDY_0495a 32b8fab7dc3dc37cf2e9816b807aea53 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 2.0E-20 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0495a 32b8fab7dc3dc37cf2e9816b807aea53 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 2.3E-9 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0495a 32b8fab7dc3dc37cf2e9816b807aea53 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 2.3E-9 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_0495a 32b8fab7dc3dc37cf2e9816b807aea53 50 Pfam PF01848 Hok/gef family 5 46 8.9E-15 T 21-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 SDY_4255 2e7abc1f6cb9b9d121f796146f2e7356 79 Pfam PF04221 RelB antitoxin 1 70 1.2E-15 T 21-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SDY_4255 2e7abc1f6cb9b9d121f796146f2e7356 79 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 79 7.9E-21 T 21-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SDY_0360 6b54f935e02b1924b274f13c166505f4 91 Pfam PF07769 psiF repeat 33 65 1.0E-18 T 21-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat SDY_4294 a82bd797813cd19d1c29f202ef99472e 318 PANTHER PTHR30472:SF2 1 318 1.7E-181 T 21-04-2016 SDY_4294 a82bd797813cd19d1c29f202ef99472e 318 PANTHER PTHR30472 1 318 1.7E-181 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_4294 a82bd797813cd19d1c29f202ef99472e 318 Pfam PF01032 FecCD transport family 14 316 5.8E-93 T 21-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SDY_4294 a82bd797813cd19d1c29f202ef99472e 318 Gene3D G3DSA:1.10.3470.10 3 318 4.1E-98 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_4294 a82bd797813cd19d1c29f202ef99472e 318 SUPERFAMILY SSF81345 3 316 4.58E-79 T 21-04-2016 IPR029022 ABC transporter, BtuC-like SDY_4762 bdba12b2a9e26d19db2b28b45e076ab3 90 Pfam PF12759 InsA C-terminal domain 42 86 1.2E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4762 bdba12b2a9e26d19db2b28b45e076ab3 90 Pfam PF03811 InsA N-terminal domain 1 35 1.1E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4762 bdba12b2a9e26d19db2b28b45e076ab3 90 PANTHER PTHR33293 1 89 2.6E-20 T 21-04-2016 SDY_4762 bdba12b2a9e26d19db2b28b45e076ab3 90 PANTHER PTHR33293:SF2 1 89 2.6E-20 T 21-04-2016 SDY_0141 a7cbecb000cc00eb94b7be9dd7bbd66e 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 6.4E-158 T 21-04-2016 IPR031347 Protein AmpE SDY_0141 a7cbecb000cc00eb94b7be9dd7bbd66e 284 PANTHER PTHR38684 2 284 5.9E-109 T 21-04-2016 SDY_1676 94908636efdf36c16faa3c2ed0674250 370 PANTHER PTHR21716 3 370 3.7E-181 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_1676 94908636efdf36c16faa3c2ed0674250 370 PANTHER PTHR21716:SF20 3 370 3.7E-181 T 21-04-2016 SDY_1676 94908636efdf36c16faa3c2ed0674250 370 Pfam PF01594 Domain of unknown function DUF20 15 344 1.3E-65 T 21-04-2016 IPR002549 Transmembrane protein TqsA-like SDY_3075 f462ced71b96ba4ecec883716611ad36 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 1.0E-51 T 21-04-2016 IPR022574 Protein of unknown function DUF2623 SDY_3075 f462ced71b96ba4ecec883716611ad36 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.2E-48 T 21-04-2016 IPR022574 Protein of unknown function DUF2623 SDY_2448 05f510513ca1f7b782a9c7e1c9719cee 131 PANTHER PTHR33293 4 126 1.7E-21 T 21-04-2016 SDY_2448 05f510513ca1f7b782a9c7e1c9719cee 131 Pfam PF03400 IS1 transposase 2 131 2.3E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2090 f33401b83b7bb9f32130b5e432c32707 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.5E-55 T 21-04-2016 IPR010835 Protein of unknown function DUF1439 SDY_2007 9451ff24c4f9207f7af8e5d962470efe 131 Pfam PF03400 IS1 transposase 2 131 6.3E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2007 9451ff24c4f9207f7af8e5d962470efe 131 PANTHER PTHR33293 4 126 6.4E-22 T 21-04-2016 SDY_2855 4f563011ab0db0a71851097347585757 149 SUPERFAMILY SSF54106 97 147 4.84E-8 T 21-04-2016 IPR018392 LysM domain SDY_2855 4f563011ab0db0a71851097347585757 149 SMART SM00257 98 147 3.4E-14 T 21-04-2016 IPR018392 LysM domain SDY_2855 4f563011ab0db0a71851097347585757 149 PANTHER PTHR34700 1 149 1.2E-40 T 21-04-2016 SDY_2855 4f563011ab0db0a71851097347585757 149 SMART SM00749 28 91 3.6E-9 T 21-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria SDY_2855 4f563011ab0db0a71851097347585757 149 Gene3D G3DSA:3.10.350.10 97 148 4.0E-12 T 21-04-2016 IPR018392 LysM domain SDY_2855 4f563011ab0db0a71851097347585757 149 Pfam PF04972 BON domain 24 89 7.1E-10 T 21-04-2016 IPR007055 BON domain SDY_2855 4f563011ab0db0a71851097347585757 149 Pfam PF01476 LysM domain 99 147 1.3E-12 T 21-04-2016 IPR018392 LysM domain SDY_1212 f9dc5eb605fec12ce3d10a85f7431d01 219 Gene3D G3DSA:3.90.850.10 14 218 7.3E-79 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SDY_1212 f9dc5eb605fec12ce3d10a85f7431d01 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 210 5.1E-53 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SDY_1212 f9dc5eb605fec12ce3d10a85f7431d01 219 SUPERFAMILY SSF56529 11 213 4.19E-70 T 21-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SDY_1212 f9dc5eb605fec12ce3d10a85f7431d01 219 PANTHER PTHR11820 16 211 5.8E-86 T 21-04-2016 SDY_2386 9922c4a7e6c0778d7156c9fe0fad4fdf 125 Pfam PF03400 IS1 transposase 1 125 1.1E-73 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_2386 9922c4a7e6c0778d7156c9fe0fad4fdf 125 PANTHER PTHR33293 1 124 3.8E-43 T 21-04-2016 SDY_2248 5c8d1b3a4f1942dc084011959ca2e661 166 PANTHER PTHR11206 1 156 4.4E-26 T 21-04-2016 SDY_2248 5c8d1b3a4f1942dc084011959ca2e661 166 Pfam PF01554 MatE 1 150 1.5E-34 T 21-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SDY_2736 63198320588ef27452e3cfc6fb4e2fc0 66 SUPERFAMILY SSF53822 5 60 2.94E-5 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_2736 63198320588ef27452e3cfc6fb4e2fc0 66 Gene3D G3DSA:3.40.50.2300 12 58 1.1E-4 T 21-04-2016 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 ProSitePatterns PS01068 OmpA-like domain. 76 120 - T 21-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 89 106 4.5E-8 T 21-04-2016 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 127 147 4.5E-8 T 21-04-2016 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 60 86 4.5E-8 T 21-04-2016 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 107 126 4.5E-8 T 21-04-2016 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01021 OMPA domain signature 44 66 2.7E-13 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01021 OMPA domain signature 74 89 2.7E-13 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PRINTS PR01021 OMPA domain signature 89 105 2.7E-13 T 21-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 SUPERFAMILY SSF103088 31 146 1.18E-38 T 21-04-2016 IPR006665 OmpA-like domain SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 Pfam PF00691 OmpA family 43 138 3.6E-23 T 21-04-2016 IPR006665 OmpA-like domain SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 Gene3D G3DSA:3.30.1330.60 31 144 1.9E-40 T 21-04-2016 IPR006665 OmpA-like domain SDY_4351 e5fa8e549f36a3102f1e8ee693e3935c 147 PANTHER PTHR30128 1 147 4.1E-59 T 21-04-2016 SDY_3275 cb80139e99b3d00bf984e8c45ef7534e 179 Pfam PF10688 Bacterial inner membrane protein 7 159 2.2E-55 T 21-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV SDY_3275 cb80139e99b3d00bf984e8c45ef7534e 179 PIRSF PIRSF011443 3 176 2.0E-66 T 21-04-2016 IPR026267 Inner membrane protein YgjV SDY_3930 ab1fb674f83a2ab84f8df3682deaa8b7 254 Pfam PF09992 Phosphodiester glycosidase 84 232 1.4E-16 T 21-04-2016 IPR018711 Phosphodiester glycosidase SDY_0788a 630c0d994815de16efa4ca9805acfe4a 90 Pfam PF12759 InsA C-terminal domain 42 87 7.4E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0788a 630c0d994815de16efa4ca9805acfe4a 90 PANTHER PTHR33293 1 89 4.9E-21 T 21-04-2016 SDY_0788a 630c0d994815de16efa4ca9805acfe4a 90 Gene3D G3DSA:1.10.10.60 53 85 2.1E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0788a 630c0d994815de16efa4ca9805acfe4a 90 PANTHER PTHR33293:SF2 1 89 4.9E-21 T 21-04-2016 SDY_0788a 630c0d994815de16efa4ca9805acfe4a 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_1687 a34e973bd3e4f226346bf1b93a914fd3 148 PANTHER PTHR38452 1 147 1.1E-73 T 21-04-2016 SDY_1687 a34e973bd3e4f226346bf1b93a914fd3 148 PANTHER PTHR38452:SF1 1 147 1.1E-73 T 21-04-2016 SDY_1687 a34e973bd3e4f226346bf1b93a914fd3 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 3.0E-38 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame SDY_1687 a34e973bd3e4f226346bf1b93a914fd3 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 2.8E-43 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame SDY_1687 a34e973bd3e4f226346bf1b93a914fd3 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.052 T 21-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame SDY_0343 08bc0fecf53deff5a773ca3f9e26dccd 131 PANTHER PTHR33293 6 126 1.1E-25 T 21-04-2016 SDY_0343 08bc0fecf53deff5a773ca3f9e26dccd 131 PANTHER PTHR33293:SF1 6 126 1.1E-25 T 21-04-2016 SDY_0343 08bc0fecf53deff5a773ca3f9e26dccd 131 Pfam PF03400 IS1 transposase 2 131 3.4E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0747 e4bcd424fc555ea63b87abe561988a52 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 118 9.0E-61 T 21-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 SDY_0747 e4bcd424fc555ea63b87abe561988a52 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 3 117 2.1E-46 T 21-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 SDY_0966 0a17bb59f3b34aa9a8a2c2b89b9e1d0b 186 PANTHER PTHR30224:SF4 1 182 2.2E-42 T 21-04-2016 SDY_0966 0a17bb59f3b34aa9a8a2c2b89b9e1d0b 186 PANTHER PTHR30224 1 182 2.2E-42 T 21-04-2016 SDY_0966 0a17bb59f3b34aa9a8a2c2b89b9e1d0b 186 Pfam PF12801 4Fe-4S binding domain 97 142 4.4E-15 T 21-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SDY_1630 e9844389c9bbb0a1b3c28124786d1b7d 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 3.5E-51 T 21-04-2016 IPR020378 Protein of unknown function DUF4186 SDY_1630 e9844389c9bbb0a1b3c28124786d1b7d 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 1.0E-52 T 21-04-2016 IPR020378 Protein of unknown function DUF4186 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 PANTHER PTHR40578:SF1 5 157 1.2E-53 T 21-04-2016 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 PANTHER PTHR40578 5 157 1.2E-53 T 21-04-2016 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 SUPERFAMILY SSF160704 28 157 4.05E-39 T 21-04-2016 IPR009736 Protein of unknown function DUF1307 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 PIRSF PIRSF006187 5 157 1.1E-57 T 21-04-2016 IPR009736 Protein of unknown function DUF1307 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 Pfam PF06998 Protein of unknown function (DUF1307) 32 154 2.1E-40 T 21-04-2016 IPR009736 Protein of unknown function DUF1307 SDY_2166 26db9f7f17242d3c0f0bc5f80e4b99ea 157 Gene3D G3DSA:3.30.1830.10 31 157 1.9E-44 T 21-04-2016 IPR009736 Protein of unknown function DUF1307 SDY_0372 1980a86fcbe3156b8f72840451a28999 131 Pfam PF03400 IS1 transposase 2 131 5.9E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0372 1980a86fcbe3156b8f72840451a28999 131 PANTHER PTHR33293 6 126 3.2E-22 T 21-04-2016 SDY_0372 1980a86fcbe3156b8f72840451a28999 131 PANTHER PTHR33293:SF1 6 126 3.2E-22 T 21-04-2016 SDY_0491 362e99bf7acf3ac9ba8a3a6cd5e4cd15 217 Gene3D G3DSA:3.40.109.10 1 214 2.4E-59 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_0491 362e99bf7acf3ac9ba8a3a6cd5e4cd15 217 PANTHER PTHR23026 1 217 2.8E-109 T 21-04-2016 SDY_0491 362e99bf7acf3ac9ba8a3a6cd5e4cd15 217 Pfam PF00881 Nitroreductase family 8 193 2.1E-33 T 21-04-2016 IPR029479 Nitroreductase SDY_0491 362e99bf7acf3ac9ba8a3a6cd5e4cd15 217 PANTHER PTHR23026:SF101 1 217 2.8E-109 T 21-04-2016 SDY_0491 362e99bf7acf3ac9ba8a3a6cd5e4cd15 217 SUPERFAMILY SSF55469 1 216 1.44E-63 T 21-04-2016 IPR000415 Nitroreductase-like GO:0016491 SDY_1233 d1da91d9008319862b4b8ba50d19610a 244 Gene3D G3DSA:2.30.110.10 11 102 7.2E-5 T 21-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SDY_1233 d1da91d9008319862b4b8ba50d19610a 244 Pfam PF07317 Flagellar regulator YcgR 8 109 5.1E-22 T 21-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal SDY_1233 d1da91d9008319862b4b8ba50d19610a 244 Gene3D G3DSA:2.40.10.220 113 242 7.9E-42 T 21-04-2016 SDY_1233 d1da91d9008319862b4b8ba50d19610a 244 Pfam PF07238 PilZ domain 112 230 4.3E-12 T 21-04-2016 IPR009875 PilZ domain GO:0035438 SDY_1233 d1da91d9008319862b4b8ba50d19610a 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 28.643 T 21-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 SDY_2898 4a70a70c7fd75c55a1af29243bd9692c 187 PANTHER PTHR40399 3 183 7.0E-101 T 21-04-2016 SDY_2898 4a70a70c7fd75c55a1af29243bd9692c 187 PIRSF PIRSF038321 2 182 7.0E-88 T 21-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 SDY_2898 4a70a70c7fd75c55a1af29243bd9692c 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 1.2E-112 T 21-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 SDY_2898 4a70a70c7fd75c55a1af29243bd9692c 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 2.8E-75 T 21-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 SDY_2035 57441dfb8478327bdd2fab587c63713d 357 Pfam PF01757 Acyltransferase family 7 325 9.4E-23 T 21-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SDY_0774 595a7dd9bc6f209a79b6edb485af1877 238 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 1 231 3.0E-135 T 21-04-2016 IPR020291 DNA modification protein Mom KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- SDY_4020 abe518d294d5dde2be473f320d8d0a89 402 PANTHER PTHR37023 11 400 2.7E-19 T 21-04-2016 SDY_4020 abe518d294d5dde2be473f320d8d0a89 402 Pfam PF04986 Putative transposase 147 325 1.2E-51 T 21-04-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 SDY_4020 abe518d294d5dde2be473f320d8d0a89 402 Pfam PF14319 Transposase zinc-binding domain 21 123 4.2E-25 T 21-04-2016 IPR026889 Transposase zinc-binding domain SDY_3183 da98289c723015fa4cb20ec46eff7b87 224 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 26 221 1.0E-69 T 21-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SDY_3183 da98289c723015fa4cb20ec46eff7b87 224 PANTHER PTHR20855 27 221 1.2E-66 T 21-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SDY_3183 da98289c723015fa4cb20ec46eff7b87 224 PANTHER PTHR20855:SF3 27 221 1.2E-66 T 21-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SDY_3183 da98289c723015fa4cb20ec46eff7b87 224 Pfam PF03006 Haemolysin-III related 25 214 2.4E-34 T 21-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SDY_1023 ee1410775fbd3a6a88d79a4d5e2feaaa 318 Pfam PF00756 Putative esterase 65 200 1.4E-7 T 21-04-2016 IPR000801 Putative esterase SDY_1023 ee1410775fbd3a6a88d79a4d5e2feaaa 318 PANTHER PTHR40841 1 307 2.5E-91 T 21-04-2016 SDY_1023 ee1410775fbd3a6a88d79a4d5e2feaaa 318 SUPERFAMILY SSF53474 42 300 2.63E-56 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_1023 ee1410775fbd3a6a88d79a4d5e2feaaa 318 PANTHER PTHR40841:SF2 1 307 2.5E-91 T 21-04-2016 SDY_1023 ee1410775fbd3a6a88d79a4d5e2feaaa 318 Gene3D G3DSA:3.40.50.1820 53 303 1.7E-63 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_0010 1fd45be68bbf6f021a0b2b86851c2fef 188 PANTHER PTHR30178:SF6 1 186 1.3E-127 T 21-04-2016 SDY_0010 1fd45be68bbf6f021a0b2b86851c2fef 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 2.9E-41 T 21-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SDY_0010 1fd45be68bbf6f021a0b2b86851c2fef 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 21-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SDY_0010 1fd45be68bbf6f021a0b2b86851c2fef 188 PANTHER PTHR30178 1 186 1.3E-127 T 21-04-2016 SDY_2606 785a65e4f32fdcff10bd32d1f6834e99 332 PANTHER PTHR18640 1 327 4.3E-134 T 21-04-2016 IPR016833 Putative sodium bile acid cotransporter SDY_2606 785a65e4f32fdcff10bd32d1f6834e99 332 PANTHER PTHR18640:SF9 1 327 4.3E-134 T 21-04-2016 SDY_2606 785a65e4f32fdcff10bd32d1f6834e99 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 4.8E-104 T 21-04-2016 IPR016833 Putative sodium bile acid cotransporter SDY_2606 785a65e4f32fdcff10bd32d1f6834e99 332 PIRSF PIRSF026166 1 332 9.4E-137 T 21-04-2016 IPR016833 Putative sodium bile acid cotransporter SDY_2777 96676340801b139232f43df549b9ba7e 102 Pfam PF13689 Domain of unknown function (DUF4154) 50 97 2.2E-10 T 21-04-2016 IPR025293 Protein of unknown function DUF4154 SDY_3284 1fcc4e3b52ea6de5a7f11ba4d771b60d 127 Pfam PF06476 Protein of unknown function (DUF1090) 16 120 4.1E-36 T 21-04-2016 IPR009468 Protein of unknown function DUF1090 SDY_1382 f8f58aaa86251760afccbc7503ac1d56 226 Pfam PF09588 YqaJ-like viral recombinase domain 24 166 1.7E-23 T 21-04-2016 IPR019080 YqaJ viral recombinase SDY_1382 f8f58aaa86251760afccbc7503ac1d56 226 Gene3D G3DSA:3.90.320.10 5 225 5.1E-76 T 21-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SDY_1382 f8f58aaa86251760afccbc7503ac1d56 226 SUPERFAMILY SSF52980 5 225 8.58E-66 T 21-04-2016 IPR011335 Restriction endonuclease type II-like SDY_1939 e9921b39277c0b42ae747f7a86edb6b4 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.1E-33 T 21-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 SDY_1939 e9921b39277c0b42ae747f7a86edb6b4 74 Pfam PF06667 Phage shock protein B 3 73 1.6E-32 T 21-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 SDY_1195 4943f333c2580d2ba38f5c7e7e350e6c 279 Pfam PF00665 Integrase core domain 108 223 1.4E-33 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1195 4943f333c2580d2ba38f5c7e7e350e6c 279 SUPERFAMILY SSF53098 101 263 7.21E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1195 4943f333c2580d2ba38f5c7e7e350e6c 279 PANTHER PTHR32552 4 269 8.8E-74 T 21-04-2016 SDY_1195 4943f333c2580d2ba38f5c7e7e350e6c 279 Gene3D G3DSA:3.30.420.10 102 261 4.6E-42 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_4463 0b0b08f38857a7d862d1ef7fc312465b 167 PANTHER PTHR32196 1 167 7.4E-76 T 21-04-2016 SDY_4463 0b0b08f38857a7d862d1ef7fc312465b 167 Pfam PF13407 Periplasmic binding protein domain 26 167 1.1E-24 T 21-04-2016 IPR025997 Periplasmic binding protein SDY_4463 0b0b08f38857a7d862d1ef7fc312465b 167 PANTHER PTHR32196:SF20 1 167 7.4E-76 T 21-04-2016 SDY_4463 0b0b08f38857a7d862d1ef7fc312465b 167 SUPERFAMILY SSF53822 23 167 5.03E-34 T 21-04-2016 IPR028082 Periplasmic binding protein-like I SDY_4463 0b0b08f38857a7d862d1ef7fc312465b 167 Gene3D G3DSA:3.40.50.2300 24 167 2.0E-34 T 21-04-2016 SDY_1571 e302f4e5e3801c616a7a308b1659c723 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 3.0E-137 T 21-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 SDY_1571 e302f4e5e3801c616a7a308b1659c723 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 1.0E-127 T 21-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 SDY_1571 e302f4e5e3801c616a7a308b1659c723 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 1 236 68.487 T 21-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 SDY_4117 ad926038dedc4d1fa3bbf6990f6d28e2 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.5E-152 T 21-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 SDY_4117 ad926038dedc4d1fa3bbf6990f6d28e2 354 PIRSF PIRSF007313 1 354 7.9E-156 T 21-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 SDY_0973 6077cac49b5970595ab6b97557a79c06 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 5.2E-27 T 21-04-2016 SDY_1201 69becd1cee3077ddc45f3a39c8310404 131 Pfam PF03400 IS1 transposase 2 131 5.0E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1201 69becd1cee3077ddc45f3a39c8310404 131 PANTHER PTHR33293 9 126 2.0E-23 T 21-04-2016 SDY_1201 69becd1cee3077ddc45f3a39c8310404 131 PANTHER PTHR33293:SF1 9 126 2.0E-23 T 21-04-2016 SDY_2145 cc7ff6b35e5ac41b492b115dbc5d2ffe 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 1.0E-109 T 21-04-2016 IPR005261 Conserved hypothetical protein CHP00659 SDY_2145 cc7ff6b35e5ac41b492b115dbc5d2ffe 231 Pfam PF04172 LrgB-like family 12 224 3.7E-79 T 21-04-2016 IPR007300 CidB/LrgB family SDY_2145 cc7ff6b35e5ac41b492b115dbc5d2ffe 231 PANTHER PTHR30249 1 230 4.8E-114 T 21-04-2016 SDY_2145 cc7ff6b35e5ac41b492b115dbc5d2ffe 231 PANTHER PTHR30249:SF5 1 230 4.8E-114 T 21-04-2016 SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 SMART SM01007 8 182 3.7E-68 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 SUPERFAMILY SSF53639 1 212 1.43E-69 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 1.4E-134 T 21-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 62.414 T 21-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 PANTHER PTHR22789:SF0 1 215 1.1E-102 T 21-04-2016 SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 PANTHER PTHR22789 1 215 1.1E-102 T 21-04-2016 SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 4.7E-48 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_3017 3dbf2e28e039acdb27aba57a7e14a764 215 Gene3D G3DSA:3.40.225.10 1 210 1.2E-67 T 21-04-2016 IPR001303 Class II aldolase/adducin N-terminal SDY_2709 7e34e8464154a27d30ff2bd9940fd001 206 PIRSF PIRSF006170 1 206 6.8E-60 T 21-04-2016 IPR026039 Uncharacterised protein family UPF0070 SDY_2709 7e34e8464154a27d30ff2bd9940fd001 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.0E-55 T 21-04-2016 IPR018704 Tetratricopeptide repeat-like domain SDY_2709 7e34e8464154a27d30ff2bd9940fd001 206 PANTHER PTHR38035 2 206 6.8E-93 T 21-04-2016 SDY_2709 7e34e8464154a27d30ff2bd9940fd001 206 Gene3D G3DSA:1.25.40.10 53 186 5.1E-5 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_2709 7e34e8464154a27d30ff2bd9940fd001 206 SUPERFAMILY SSF48452 88 186 7.59E-6 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3010 4ab5b688f9c907d76074f5130e1da15d 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.9E-71 T 21-04-2016 IPR009948 Syd GO:0009898 SDY_3010 4ab5b688f9c907d76074f5130e1da15d 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.453 T 21-04-2016 IPR009948 Syd GO:0009898 SDY_4057 ef0e7d7f10271cf773d188c63809aa16 230 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 9.5E-130 T 21-04-2016 IPR009330 Lipopolysaccharide core heptose(II) kinase KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 SDY_4057 ef0e7d7f10271cf773d188c63809aa16 230 SUPERFAMILY SSF56112 32 179 6.38E-9 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_4142 42130eda58897e0ac518fb30629f5c9b 119 PIRSF PIRSF018634 1 117 1.3E-48 T 21-04-2016 IPR009387 Toxin HigB-2 SDY_4142 42130eda58897e0ac518fb30629f5c9b 119 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 113 2.1E-41 T 21-04-2016 IPR009387 Toxin HigB-2 SDY_1695 455f98bebfeb521aa6aa9acd749a3b4e 82 PANTHER PTHR33884 1 82 1.4E-37 T 21-04-2016 SDY_1695 455f98bebfeb521aa6aa9acd749a3b4e 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.7E-17 T 21-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SDY_1695 455f98bebfeb521aa6aa9acd749a3b4e 82 PANTHER PTHR33884:SF1 1 82 1.4E-37 T 21-04-2016 SDY_0530 95856758bc910f75b955633a0b386897 65 PANTHER PTHR38453:SF2 1 65 1.5E-43 T 21-04-2016 SDY_0530 95856758bc910f75b955633a0b386897 65 PANTHER PTHR38453 1 65 1.5E-43 T 21-04-2016 SDY_0530 95856758bc910f75b955633a0b386897 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 8.7E-31 T 21-04-2016 IPR007423 Protein of unknown function DUF466 SDY_1466 5b6634f0018f7586b8c6a160012e62f1 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 61 4.0E-21 T 21-04-2016 SDY_1466 5b6634f0018f7586b8c6a160012e62f1 61 Pfam PF13617 YnbE-like lipoprotein 5 59 6.4E-28 T 21-04-2016 IPR025985 YnbE-like lipoprotein SDY_1673 6a531757cc64f608803c921ab10821e8 89 Pfam PF15930 Domain of unknown function 28 89 5.4E-40 T 21-04-2016 IPR031830 Uncharacterised protein YdiH SDY_1936 5a267363dad2c0f770c76db3a694251e 104 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 103 1.7E-63 T 21-04-2016 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 SDY_1936 5a267363dad2c0f770c76db3a694251e 104 SMART SM00450 7 103 2.2E-13 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_1936 5a267363dad2c0f770c76db3a694251e 104 Pfam PF00581 Rhodanese-like domain 23 89 4.5E-12 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_1936 5a267363dad2c0f770c76db3a694251e 104 Gene3D G3DSA:3.40.250.10 23 96 3.7E-22 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_1936 5a267363dad2c0f770c76db3a694251e 104 SUPERFAMILY SSF52821 22 93 3.01E-19 T 21-04-2016 IPR001763 Rhodanese-like domain SDY_1117 96c5f61e193689d16bb38315cf420562 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 2.3E-48 T 21-04-2016 IPR020262 Uncharacterised protein family YecJ SDY_1117 96c5f61e193689d16bb38315cf420562 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-37 T 21-04-2016 IPR020262 Uncharacterised protein family YecJ SDY_4060 c44b80e3fb233d5b296234d1e9282f52 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 233 2.3E-72 T 21-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 SDY_4060 c44b80e3fb233d5b296234d1e9282f52 268 PIRSF PIRSF037318 4 268 6.8E-161 T 21-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 SDY_4060 c44b80e3fb233d5b296234d1e9282f52 268 SUPERFAMILY SSF56112 61 208 3.74E-8 T 21-04-2016 IPR011009 Protein kinase-like domain SDY_3081 0f9258ff60cd3d6ce4623c7d398503a4 162 Pfam PF11939 Protein of unknown function (DUF3457) 12 155 5.7E-43 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE SDY_3081 0f9258ff60cd3d6ce4623c7d398503a4 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 2.0E-67 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE SDY_3081 0f9258ff60cd3d6ce4623c7d398503a4 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 4.9E-48 T 21-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE SDY_0916 0beaf9319408bea6cb53a4c756fdb7ef 187 PANTHER PTHR33420:SF1 16 187 1.3E-49 T 21-04-2016 SDY_0916 0beaf9319408bea6cb53a4c756fdb7ef 187 Gene3D G3DSA:2.60.40.1090 41 186 2.8E-36 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0916 0beaf9319408bea6cb53a4c756fdb7ef 187 Pfam PF00419 Fimbrial protein 44 186 1.8E-13 T 21-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 SDY_0916 0beaf9319408bea6cb53a4c756fdb7ef 187 PANTHER PTHR33420 16 187 1.3E-49 T 21-04-2016 SDY_0916 0beaf9319408bea6cb53a4c756fdb7ef 187 SUPERFAMILY SSF49401 42 187 1.69E-31 T 21-04-2016 IPR008966 Adhesion domain SDY_3086 e964c9f8132ab8cea31440f2b12f77a4 499 PANTHER PTHR11101 2 499 0.0 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SDY_3086 e964c9f8132ab8cea31440f2b12f77a4 499 PANTHER PTHR11101:SF59 2 499 0.0 T 21-04-2016 SDY_3086 e964c9f8132ab8cea31440f2b12f77a4 499 Pfam PF01384 Phosphate transporter family 206 488 2.1E-44 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SDY_3086 e964c9f8132ab8cea31440f2b12f77a4 499 Pfam PF01384 Phosphate transporter family 30 182 3.0E-36 T 21-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SDY_3499 8f248dd1aab77a85c2369f8554b2326e 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 4.5E-15 T 21-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SDY_3499 8f248dd1aab77a85c2369f8554b2326e 64 PANTHER PTHR37424:SF1 2 64 2.8E-22 T 21-04-2016 SDY_3499 8f248dd1aab77a85c2369f8554b2326e 64 PANTHER PTHR37424 2 64 2.8E-22 T 21-04-2016 SDY_4540 76af60ed13491321c6ddf7c4787e26ff 131 Pfam PF03400 IS1 transposase 2 131 5.4E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4540 76af60ed13491321c6ddf7c4787e26ff 131 PANTHER PTHR33293 4 126 2.3E-23 T 21-04-2016 SDY_1966 47db7125f51b03a68b3081b13ec28e24 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 4.8E-62 T 21-04-2016 IPR009328 Protein of unknown function DUF986 SDY_1966 47db7125f51b03a68b3081b13ec28e24 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.437 T 21-04-2016 IPR009328 Protein of unknown function DUF986 SDY_1966 47db7125f51b03a68b3081b13ec28e24 152 PIRSF PIRSF020687 1 152 5.1E-69 T 21-04-2016 IPR009328 Protein of unknown function DUF986 SDY_1966 47db7125f51b03a68b3081b13ec28e24 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 148 3.0E-69 T 21-04-2016 IPR009328 Protein of unknown function DUF986 SDY_4381 462b97e2d1e362d8b04431636d8d32d8 156 PANTHER PTHR33204 37 153 1.1E-72 T 21-04-2016 SDY_4381 462b97e2d1e362d8b04431636d8d32d8 156 Gene3D G3DSA:1.10.10.10 31 153 4.0E-45 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4381 462b97e2d1e362d8b04431636d8d32d8 156 PANTHER PTHR33204:SF7 37 153 1.1E-72 T 21-04-2016 SDY_4381 462b97e2d1e362d8b04431636d8d32d8 156 SUPERFAMILY SSF46785 43 148 5.11E-32 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_4381 462b97e2d1e362d8b04431636d8d32d8 156 Pfam PF01638 HxlR-like helix-turn-helix 59 145 1.1E-31 T 21-04-2016 IPR002577 Helix-turn-helix, HxlR type SDY_2462 00926371a557641dc94145ad2fafee4b 101 PANTHER PTHR35893:SF1 1 101 1.9E-72 T 21-04-2016 SDY_2462 00926371a557641dc94145ad2fafee4b 101 PANTHER PTHR35893 1 101 1.9E-72 T 21-04-2016 SDY_2462 00926371a557641dc94145ad2fafee4b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.4E-30 T 21-04-2016 IPR010279 Protein of unknown function DUF883, ElaB SDY_2674 33f9f4bb492a57a7789ad9db1e7903e1 216 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 128 211 2.2E-11 T 21-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SDY_2674 33f9f4bb492a57a7789ad9db1e7903e1 216 PANTHER PTHR38601:SF1 1 216 1.0E-56 T 21-04-2016 SDY_2674 33f9f4bb492a57a7789ad9db1e7903e1 216 PANTHER PTHR38601 1 216 1.0E-56 T 21-04-2016 SDY_2674 33f9f4bb492a57a7789ad9db1e7903e1 216 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 13 197 1.0E-85 T 21-04-2016 SDY_2785 539969502e265520399f947fc5e72cec 288 Pfam PF01578 Cytochrome C assembly protein 62 286 6.8E-45 T 21-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SDY_2785 539969502e265520399f947fc5e72cec 288 PANTHER PTHR38034 27 288 3.2E-104 T 21-04-2016 SDY_1577 3e3448b1fc85c22d0b8f7a74cbb30967 108 SUPERFAMILY SSF103481 8 105 2.75E-5 T 21-04-2016 SDY_1577 3e3448b1fc85c22d0b8f7a74cbb30967 108 PANTHER PTHR36116 1 102 9.9E-49 T 21-04-2016 SDY_1577 3e3448b1fc85c22d0b8f7a74cbb30967 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.2E-48 T 21-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SDY_1577 3e3448b1fc85c22d0b8f7a74cbb30967 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.269 T 21-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SDY_1577 3e3448b1fc85c22d0b8f7a74cbb30967 108 PANTHER PTHR36116:SF1 1 102 9.9E-49 T 21-04-2016 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 1.4E-53 T 21-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 Gene3D G3DSA:3.50.50.60 171 252 4.7E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 Gene3D G3DSA:3.50.50.60 17 118 4.7E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 Gene3D G3DSA:3.50.50.60 344 399 4.7E-49 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 PANTHER PTHR13847 1 423 1.3E-247 T 21-04-2016 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 SUPERFAMILY SSF51905 354 415 3.24E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 SUPERFAMILY SSF51905 27 252 3.24E-43 T 21-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SDY_1943 d902dac2a76fde4fbb4ae2c17c3db8e8 426 PANTHER PTHR13847:SF210 1 423 1.3E-247 T 21-04-2016 SDY_0907a dba544ddbc138316162a3bb53f91d15e 84 PANTHER PTHR36931 1 84 1.1E-38 T 21-04-2016 SDY_0907a dba544ddbc138316162a3bb53f91d15e 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 2.6E-6 T 21-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SDY_1918 8373603df90fa577a7d70ab681a09bc2 282 Pfam PF00665 Integrase core domain 117 231 5.7E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_1918 8373603df90fa577a7d70ab681a09bc2 282 Pfam PF13276 HTH-like domain 37 92 2.0E-10 T 21-04-2016 IPR025948 HTH-like domain SDY_1918 8373603df90fa577a7d70ab681a09bc2 282 PANTHER PTHR32552 2 280 2.1E-72 T 21-04-2016 SDY_1918 8373603df90fa577a7d70ab681a09bc2 282 SUPERFAMILY SSF53098 110 274 6.37E-37 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1918 8373603df90fa577a7d70ab681a09bc2 282 Gene3D G3DSA:3.30.420.10 111 271 2.5E-32 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 PANTHER PTHR14969 157 253 7.3E-107 T 21-04-2016 SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 PANTHER PTHR14969 1 120 7.3E-107 T 21-04-2016 SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 SUPERFAMILY SSF48317 150 234 1.7E-32 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 SUPERFAMILY SSF48317 16 118 1.7E-32 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 PANTHER PTHR14969:SF22 157 253 7.3E-107 T 21-04-2016 SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 PANTHER PTHR14969:SF22 1 120 7.3E-107 T 21-04-2016 SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 Gene3D G3DSA:1.20.144.10 32 106 3.6E-29 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 Gene3D G3DSA:1.20.144.10 138 240 3.6E-29 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 Pfam PF01569 PAP2 superfamily 79 232 1.5E-34 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_1354 395f94a9f33cf11ba3dcbc322e63ad12 254 SMART SM00014 77 227 6.0E-49 T 21-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SDY_0440 19b9770a6b25b5d336bf68f4f61652db 448 PANTHER PTHR37529 4 446 2.7E-82 T 21-04-2016 SDY_0440 19b9770a6b25b5d336bf68f4f61652db 448 Pfam PF01609 Transposase DDE domain 134 358 7.0E-31 T 21-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SDY_0440 19b9770a6b25b5d336bf68f4f61652db 448 Pfam PF13006 Insertion element 4 transposase N-terminal 25 115 1.7E-30 T 21-04-2016 IPR024473 Transposase, IS4, N-terminal SDY_0440 19b9770a6b25b5d336bf68f4f61652db 448 SUPERFAMILY SSF53098 120 419 8.34E-30 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_2142 a42cc6e715e7680dd17a1d3d1dd0afcd 79 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 1 79 1.0E-32 T 21-04-2016 IPR020155 Uncharacterised protein family YeiS GO:0016021 SDY_2142 a42cc6e715e7680dd17a1d3d1dd0afcd 79 Pfam PF10808 Protein of unknown function (DUF2542) 1 79 1.8E-45 T 21-04-2016 IPR020155 Uncharacterised protein family YeiS GO:0016021 SDY_3981 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 21-04-2016 IPR012567 IlvGEDA operon leader peptide GO:0009082 SDY_3255 8786bf832d16c9d1555113e28e2f74d0 207 SUPERFAMILY SSF46785 63 190 3.47E-23 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3255 8786bf832d16c9d1555113e28e2f74d0 207 Gene3D G3DSA:1.10.10.10 51 151 1.6E-29 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_3255 8786bf832d16c9d1555113e28e2f74d0 207 PANTHER PTHR33169:SF2 49 207 2.2E-46 T 21-04-2016 SDY_3255 8786bf832d16c9d1555113e28e2f74d0 207 Pfam PF03551 Transcriptional regulator PadR-like family 67 136 6.7E-16 T 21-04-2016 IPR005149 Transcription regulator PadR, N-terminal SDY_3255 8786bf832d16c9d1555113e28e2f74d0 207 PANTHER PTHR33169 49 207 2.2E-46 T 21-04-2016 SDY_2097 e8a7f3a1191b80e840fc13ba4a5b87ef 46 Pfam PF10968 Protein of unknown function (DUF2770) 10 45 4.1E-20 T 21-04-2016 IPR024494 Protein of unknown function DUF2770 SDY_2097 e8a7f3a1191b80e840fc13ba4a5b87ef 46 ProDom PD049682 YCEO INNER MEMBRANE STY1197 10 46 4.0E-13 T 21-04-2016 IPR024494 Protein of unknown function DUF2770 SDY_3227 0e62a4d1cd1ee1d40fb1dd7be19d8066 119 PANTHER PTHR38040 22 115 3.6E-42 T 21-04-2016 SDY_3227 0e62a4d1cd1ee1d40fb1dd7be19d8066 119 PANTHER PTHR38040:SF1 22 115 3.6E-42 T 21-04-2016 SDY_3227 0e62a4d1cd1ee1d40fb1dd7be19d8066 119 Pfam PF04380 Membrane fusogenic activity 21 98 1.7E-28 T 21-04-2016 IPR007475 Membrane fusogenic activity SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 Gene3D G3DSA:1.20.1250.20 204 371 5.7E-20 T 21-04-2016 SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 Gene3D G3DSA:1.20.1250.20 8 182 1.8E-15 T 21-04-2016 SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 Pfam PF12832 MFS_1 like family 8 356 9.0E-46 T 21-04-2016 IPR024989 Major facilitator superfamily associated domain SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 SUPERFAMILY SSF103473 7 371 7.59E-36 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 PIRSF PIRSF004925 1 379 1.7E-120 T 21-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 PANTHER PTHR23522:SF3 1 378 1.7E-150 T 21-04-2016 SDY_2732 3804814899d3ffef6cdae0fb1439966e 379 PANTHER PTHR23522 1 378 1.7E-150 T 21-04-2016 SDY_0810 3a61fcb484e9910d237ac366d1ff58bc 377 PANTHER PTHR30294:SF17 5 377 4.6E-304 T 21-04-2016 SDY_0810 3a61fcb484e9910d237ac366d1ff58bc 377 Pfam PF12698 ABC-2 family transporter protein 29 370 3.3E-38 T 21-04-2016 SDY_0810 3a61fcb484e9910d237ac366d1ff58bc 377 PANTHER PTHR30294 5 377 4.6E-304 T 21-04-2016 SDY_2544 b7573df6e217f531411da34b0748eb7d 102 Pfam PF04175 Protein of unknown function (DUF406) 11 102 6.6E-39 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 SDY_2544 b7573df6e217f531411da34b0748eb7d 102 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 8 102 6.5E-47 T 21-04-2016 IPR005272 Conserved hypothetical protein CHP00743 SDY_2544 b7573df6e217f531411da34b0748eb7d 102 PANTHER PTHR38769:SF1 2 102 3.4E-34 T 21-04-2016 SDY_2544 b7573df6e217f531411da34b0748eb7d 102 Gene3D G3DSA:3.30.70.860 31 102 7.3E-35 T 21-04-2016 SDY_2544 b7573df6e217f531411da34b0748eb7d 102 PANTHER PTHR38769 2 102 3.4E-34 T 21-04-2016 SDY_4036 7d4d5eb4a6863badf631d5c8072983c9 551 PANTHER PTHR30003 2 551 0.0 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SDY_4036 7d4d5eb4a6863badf631d5c8072983c9 551 Pfam PF02652 L-lactate permease 16 542 3.5E-233 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SDY_4036 7d4d5eb4a6863badf631d5c8072983c9 551 PANTHER PTHR30003:SF0 2 551 0.0 T 21-04-2016 SDY_4036 7d4d5eb4a6863badf631d5c8072983c9 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 7.0E-240 T 21-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 1.6E-70 T 21-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 1.2E-185 T 21-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.1E-37 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.1E-37 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.1E-37 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.1E-37 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.1E-37 T 21-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PANTHER PTHR22773:SF40 1 509 5.5E-197 T 21-04-2016 SDY_2473 6c0c39d4d9e90ec44126e5772e615508 509 PANTHER PTHR22773 1 509 5.5E-197 T 21-04-2016 SDY_4717 8fb75d31a99406117abf104d6bb0fffe 90 Pfam PF12759 InsA C-terminal domain 42 87 2.7E-30 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_4717 8fb75d31a99406117abf104d6bb0fffe 90 PANTHER PTHR33293:SF2 1 89 1.2E-20 T 21-04-2016 SDY_4717 8fb75d31a99406117abf104d6bb0fffe 90 Pfam PF03811 InsA N-terminal domain 1 35 1.0E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_4717 8fb75d31a99406117abf104d6bb0fffe 90 PANTHER PTHR33293 1 89 1.2E-20 T 21-04-2016 SDY_4488 f28cae50fcbb6a24d4df0700655a0f1f 315 SUPERFAMILY SSF48452 18 53 1.73E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_4488 f28cae50fcbb6a24d4df0700655a0f1f 315 SUPERFAMILY SSF48452 97 172 1.73E-9 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_4488 f28cae50fcbb6a24d4df0700655a0f1f 315 Gene3D G3DSA:1.25.40.10 17 224 4.7E-14 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_4443 3c81d12050e0bf23a16b5e98ddc7df33 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.3E-209 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4443 3c81d12050e0bf23a16b5e98ddc7df33 433 PIRSF PIRSF004539 1 433 7.6E-181 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4443 3c81d12050e0bf23a16b5e98ddc7df33 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.2E-144 T 21-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SDY_4443 3c81d12050e0bf23a16b5e98ddc7df33 433 PANTHER PTHR36106 1 433 0.0 T 21-04-2016 SDY_4443 3c81d12050e0bf23a16b5e98ddc7df33 433 PANTHER PTHR36106:SF2 1 433 0.0 T 21-04-2016 SDY_0898 85d110fcb691b7a499d87f98acd9e2ce 114 Pfam PF13989 YejG-like protein 4 108 1.5E-48 T 21-04-2016 IPR020489 Uncharacterised protein family YejG SDY_0898 85d110fcb691b7a499d87f98acd9e2ce 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 5.0E-63 T 21-04-2016 IPR020489 Uncharacterised protein family YejG SDY_3409 cea2d1a9826a7eaee78c6e2df6bf2e42 134 PANTHER PTHR39579 1 134 3.5E-54 T 21-04-2016 SDY_3409 cea2d1a9826a7eaee78c6e2df6bf2e42 134 PIRSF PIRSF006318 1 134 1.8E-51 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 SDY_3409 cea2d1a9826a7eaee78c6e2df6bf2e42 134 Pfam PF06295 Protein of unknown function (DUF1043) 8 128 2.4E-47 T 21-04-2016 IPR009386 Protein of unknown function DUF1043 SDY_2105 2fe9fc8ebe17c0a86b5e596440ee739b 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 8.2E-150 T 21-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SDY_2105 2fe9fc8ebe17c0a86b5e596440ee739b 416 PANTHER PTHR10590 1 413 1.5E-180 T 21-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SDY_2105 2fe9fc8ebe17c0a86b5e596440ee739b 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 7.5E-66 T 21-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_2105 2fe9fc8ebe17c0a86b5e596440ee739b 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.6E-21 T 21-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SDY_4591 d38bb4e43aa26a7a8575dcab7e332687 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 6.0E-33 T 21-04-2016 IPR009329 Protein of unknown function DUF987 SDY_4591 d38bb4e43aa26a7a8575dcab7e332687 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 6.6E-38 T 21-04-2016 IPR009329 Protein of unknown function DUF987 SDY_2953 8c9851124897a0d28002ed2b3aa0559f 94 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 4.8E-37 T 21-04-2016 IPR010152 CRISPR-associated protein Cas2 subtype SDY_2953 8c9851124897a0d28002ed2b3aa0559f 94 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 6.9E-43 T 21-04-2016 IPR010152 CRISPR-associated protein Cas2 subtype SDY_4009 e48c3498685547481d38ac4b6ecf0af5 126 Pfam PF03899 ATP synthase I chain 13 108 1.0E-14 T 21-04-2016 IPR005598 ATP synthase protein I SDY_4465 f682466422d8c6837a5aab5cd1aea46c 308 Pfam PF13520 Amino acid permease 6 280 1.6E-18 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_4465 f682466422d8c6837a5aab5cd1aea46c 308 PANTHER PTHR11785:SF332 1 304 3.4E-205 T 21-04-2016 SDY_4465 f682466422d8c6837a5aab5cd1aea46c 308 PANTHER PTHR11785 1 304 3.4E-205 T 21-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SDY_2596 3a07bd2ad952e8b6daa126d40a5eec45 119 Pfam PF07037 Putative transcription regulator (DUF1323) 6 118 2.5E-49 T 21-04-2016 IPR010749 Protein of unknown function DUF1323 SDY_2596 3a07bd2ad952e8b6daa126d40a5eec45 119 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 119 6.0E-61 T 21-04-2016 IPR010749 Protein of unknown function DUF1323 SDY_2596 3a07bd2ad952e8b6daa126d40a5eec45 119 Gene3D G3DSA:1.10.10.10 3 66 1.3E-17 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_2596 3a07bd2ad952e8b6daa126d40a5eec45 119 SUPERFAMILY SSF46955 2 62 7.87E-14 T 21-04-2016 IPR009061 Putative DNA-binding domain SDY_1343 00ed2acece391bc2d4fba1e81e860271 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 1.2E-42 T 21-04-2016 IPR019633 Protein of unknown function DUF2498 SDY_0492 8d241ef618e7f1fecb13aacce1696495 122 PANTHER PTHR35145:SF2 1 122 1.2E-100 T 21-04-2016 SDY_0492 8d241ef618e7f1fecb13aacce1696495 122 Pfam PF04237 YjbR 15 106 1.1E-20 T 21-04-2016 IPR007351 Uncharacterised protein YjbR SDY_0492 8d241ef618e7f1fecb13aacce1696495 122 PANTHER PTHR35145 1 122 1.2E-100 T 21-04-2016 SDY_0492 8d241ef618e7f1fecb13aacce1696495 122 SUPERFAMILY SSF142906 8 119 6.67E-36 T 21-04-2016 SDY_4161 5bbe1769b1d198eba06113bcfd8661a1 149 PIRSF PIRSF007312 1 149 2.5E-100 T 21-04-2016 IPR016512 Uncharacterised protein family, inner membrane YidI SDY_0925 6b093e1980e8deed3368aeb3a8cf66a0 182 SUPERFAMILY SSF159594 19 179 3.66E-28 T 21-04-2016 SDY_0925 6b093e1980e8deed3368aeb3a8cf66a0 182 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 21 175 7.0E-40 T 21-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SDY_0925 6b093e1980e8deed3368aeb3a8cf66a0 182 Gene3D G3DSA:3.40.50.10610 9 176 4.7E-14 T 21-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SDY_2999 2d2ac8345144c9aa328a5b8b633fd297 111 Gene3D G3DSA:2.30.30.110 4 110 1.2E-36 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_2999 2d2ac8345144c9aa328a5b8b633fd297 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 109 2.3E-22 T 21-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SDY_2999 2d2ac8345144c9aa328a5b8b633fd297 111 SUPERFAMILY SSF50118 4 111 2.83E-33 T 21-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SDY_2999 2d2ac8345144c9aa328a5b8b633fd297 111 PANTHER PTHR33988 2 111 8.0E-50 T 21-04-2016 SDY_2999 2d2ac8345144c9aa328a5b8b633fd297 111 PANTHER PTHR33988:SF3 2 111 8.0E-50 T 21-04-2016 SDY_1127 2d00672d13a21694095e6fdaa7119f13 124 Pfam PF04234 CopC domain 27 123 7.3E-27 T 21-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 SDY_1127 2d00672d13a21694095e6fdaa7119f13 124 PANTHER PTHR34820 2 123 3.5E-12 T 21-04-2016 SDY_1127 2d00672d13a21694095e6fdaa7119f13 124 SUPERFAMILY SSF81296 26 124 6.72E-27 T 21-04-2016 IPR014756 Immunoglobulin E-set SDY_1127 2d00672d13a21694095e6fdaa7119f13 124 Gene3D G3DSA:2.60.40.1220 26 124 4.0E-32 T 21-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like SDY_4562 e811ba053be6d08d0eafc241c8d5d6c4 423 PANTHER PTHR35334:SF5 2 423 0.0 T 21-04-2016 SDY_4562 e811ba053be6d08d0eafc241c8d5d6c4 423 Pfam PF03222 Tryptophan/tyrosine permease family 21 404 4.5E-6 T 21-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 SDY_4562 e811ba053be6d08d0eafc241c8d5d6c4 423 PANTHER PTHR35334 2 423 0.0 T 21-04-2016 SDY_1513 504e1b3674035e72cbcf7d60b118f0d2 317 Pfam PF06889 Protein of unknown function (DUF1266) 138 309 1.9E-24 T 21-04-2016 IPR009677 Protein of unknown function DUF1266 SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 Gene3D G3DSA:2.60.120.370 4 152 4.6E-50 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 SUPERFAMILY SSF51197 4 152 3.3E-43 T 21-04-2016 SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 PANTHER PTHR34986:SF1 5 153 1.4E-80 T 21-04-2016 SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 Pfam PF04074 Domain of unknown function (DUF386) 4 150 7.0E-45 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 PANTHER PTHR34986 5 153 1.4E-80 T 21-04-2016 SDY_4270 cd9fa313d6b84cb67201bac8061d3f5f 153 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 4 153 5.5E-63 T 21-04-2016 IPR004375 YhcH/YjgK/YiaL family SDY_1462 70ae7df1b964c15eb97ff2db11c457d1 88 PANTHER PTHR38008:SF1 1 88 4.4E-40 T 21-04-2016 SDY_1462 70ae7df1b964c15eb97ff2db11c457d1 88 Pfam PF03891 Domain of unknown function (DUF333) 38 83 2.5E-15 T 21-04-2016 IPR005590 Protein of unknown function DUF333 SDY_1462 70ae7df1b964c15eb97ff2db11c457d1 88 PANTHER PTHR38008 1 88 4.4E-40 T 21-04-2016 SDY_1021 0e72d3ae3bd0294c8ba0a65834295a5f 131 PANTHER PTHR33293:SF1 6 126 3.3E-23 T 21-04-2016 SDY_1021 0e72d3ae3bd0294c8ba0a65834295a5f 131 PANTHER PTHR33293 6 126 3.3E-23 T 21-04-2016 SDY_1021 0e72d3ae3bd0294c8ba0a65834295a5f 131 Pfam PF03400 IS1 transposase 2 131 1.2E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3558 0e72d3ae3bd0294c8ba0a65834295a5f 131 PANTHER PTHR33293:SF1 6 126 3.3E-23 T 21-04-2016 SDY_3558 0e72d3ae3bd0294c8ba0a65834295a5f 131 PANTHER PTHR33293 6 126 3.3E-23 T 21-04-2016 SDY_3558 0e72d3ae3bd0294c8ba0a65834295a5f 131 Pfam PF03400 IS1 transposase 2 131 1.2E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_0382 914022f868c0041210055128eaaa5ae6 237 Pfam PF00665 Integrase core domain 72 186 5.9E-26 T 21-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SDY_0382 914022f868c0041210055128eaaa5ae6 237 Pfam PF13276 HTH-like domain 5 47 7.2E-9 T 21-04-2016 IPR025948 HTH-like domain SDY_0382 914022f868c0041210055128eaaa5ae6 237 SUPERFAMILY SSF53098 66 229 3.34E-36 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0382 914022f868c0041210055128eaaa5ae6 237 Gene3D G3DSA:3.30.420.10 66 226 2.1E-31 T 21-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SDY_0382 914022f868c0041210055128eaaa5ae6 237 PANTHER PTHR32552 2 235 4.2E-61 T 21-04-2016 SDY_0745 1d1e0edd38ee7490164fd7b417e7fa8a 95 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 8.9E-36 T 21-04-2016 IPR010815 Protein of unknown function DUF1418 SDY_3605 17ac6d35f75f5354ebd399d4f1caaf8d 425 PANTHER PTHR30482 59 424 9.8E-221 T 21-04-2016 SDY_3605 17ac6d35f75f5354ebd399d4f1caaf8d 425 PANTHER PTHR30482:SF9 59 424 9.8E-221 T 21-04-2016 SDY_3605 17ac6d35f75f5354ebd399d4f1caaf8d 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 4.5E-60 T 21-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SDY_3605 17ac6d35f75f5354ebd399d4f1caaf8d 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 1.1E-24 T 21-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal SDY_2062 53fd3b3ffa801fe18b080a169dc0e83d 173 PANTHER PTHR38099 2 173 6.5E-87 T 21-04-2016 SDY_2062 53fd3b3ffa801fe18b080a169dc0e83d 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.6E-19 T 21-04-2016 IPR003772 Protein of unknown function DUF177 SDY_2384 7f9d685be311c40c4bae48b156e607e3 330 Pfam PF04393 Protein of unknown function (DUF535) 48 325 1.5E-100 T 21-04-2016 IPR007488 Protein of unknown function DUF535 SDY_2384 7f9d685be311c40c4bae48b156e607e3 330 PANTHER PTHR38785 17 330 5.4E-128 T 21-04-2016 SDY_1584 38b616c6eef1665d15a0661efb303c4a 67 Pfam PF14001 YdfZ protein 3 65 1.1E-33 T 21-04-2016 IPR017704 Putative selenium-binding protein YdfZ SDY_1584 38b616c6eef1665d15a0661efb303c4a 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 3.9E-38 T 21-04-2016 IPR017704 Putative selenium-binding protein YdfZ SDY_3200 070af13cc3053602f50672bb50afd48b 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.356 T 21-04-2016 IPR023498 Zinc transporter ZupT SDY_3200 070af13cc3053602f50672bb50afd48b 257 PANTHER PTHR11040 5 254 2.7E-74 T 21-04-2016 SDY_3200 070af13cc3053602f50672bb50afd48b 257 PANTHER PTHR11040:SF56 5 254 2.7E-74 T 21-04-2016 SDY_3200 070af13cc3053602f50672bb50afd48b 257 Pfam PF02535 ZIP Zinc transporter 98 246 1.3E-25 T 21-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SDY_3200 070af13cc3053602f50672bb50afd48b 257 Pfam PF02535 ZIP Zinc transporter 6 91 1.8E-7 T 21-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SDY_3602 f8b273fd45582490d67626f637a64cf7 248 Gene3D G3DSA:1.25.40.10 87 218 5.4E-14 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_3602 f8b273fd45582490d67626f637a64cf7 248 PIRSF PIRSF030959 1 246 6.2E-120 T 21-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing SDY_3602 f8b273fd45582490d67626f637a64cf7 248 SUPERFAMILY SSF48452 88 215 1.03E-14 T 21-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SDY_0482 6c4204e37c2f6a85c02bc2dc5274a7cf 88 SUPERFAMILY SSF103365 8 73 4.18E-13 T 21-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 SDY_0784 9661b92903a1852a7d16ecc907f551e4 91 PANTHER PTHR33293 2 91 6.4E-33 T 21-04-2016 SDY_0784 9661b92903a1852a7d16ecc907f551e4 91 Pfam PF03811 InsA N-terminal domain 2 36 2.3E-20 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_0784 9661b92903a1852a7d16ecc907f551e4 91 Gene3D G3DSA:1.10.10.60 53 86 5.0E-4 T 21-04-2016 IPR009057 Homeodomain-like GO:0003677 SDY_0784 9661b92903a1852a7d16ecc907f551e4 91 Pfam PF12759 InsA C-terminal domain 43 88 1.2E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_1431 49e390c058209330c2859277ba6cbb49 131 PANTHER PTHR33293:SF1 6 126 6.7E-25 T 21-04-2016 SDY_1431 49e390c058209330c2859277ba6cbb49 131 PANTHER PTHR33293 6 126 6.7E-25 T 21-04-2016 SDY_1431 49e390c058209330c2859277ba6cbb49 131 Pfam PF03400 IS1 transposase 2 131 4.6E-76 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1752 d026434c787ab65812402243f2868ce5 55 Pfam PF04325 Protein of unknown function (DUF465) 2 47 1.0E-13 T 21-04-2016 IPR007420 Protein of unknown function DUF465 SDY_3133 1274d8e75960d35cc8dc7b8a4a447ea4 48 ProDom PD050163 YQGB INNER MEMBRANE STY3241 6 44 2.0E-16 T 21-04-2016 IPR020196 Uncharacterised protein family YqgB SDY_3133 1274d8e75960d35cc8dc7b8a4a447ea4 48 Pfam PF11036 Virulence promoting factor 6 48 4.3E-33 T 21-04-2016 IPR020196 Uncharacterised protein family YqgB SDY_1209 c4aaa058cd2c414bd3020d646544a8b6 94 Pfam PF05666 Fels-1 Prophage Protein-like 3 33 8.2E-14 T 21-04-2016 IPR008617 Uncharacterised protein family, YcgJ SDY_1209 c4aaa058cd2c414bd3020d646544a8b6 94 Pfam PF05666 Fels-1 Prophage Protein-like 41 92 2.2E-19 T 21-04-2016 IPR008617 Uncharacterised protein family, YcgJ SDY_2520 a9cd5a0ba2b3d181730f1c094071de8e 331 PIRSF PIRSF020588 2 331 3.3E-152 T 21-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 SDY_2153 bf4b32c892e0d452ea4134d29773600f 203 Pfam PF06930 Protein of unknown function (DUF1282) 15 185 4.8E-43 T 21-04-2016 IPR009698 Protein of unknown function DUF1282 SDY_4595 3ff47eb6656b66d93c5cc779bf9d2e16 85 Pfam PF11823 Protein of unknown function (DUF3343) 3 56 9.3E-12 T 21-04-2016 IPR021778 Protein of unknown function DUF3343 SDY_1291 a4ff9c61d8409cd02e63fb8d87d3bf1d 131 Pfam PF03400 IS1 transposase 2 131 1.0E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_1291 a4ff9c61d8409cd02e63fb8d87d3bf1d 131 PANTHER PTHR33293 4 126 2.4E-21 T 21-04-2016 SDY_1007 5080b090cb9b869c132f70f97ba30016 65 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 65 8.0E-47 T 21-04-2016 IPR009301 Protein of unknown function DUF957 SDY_0733 886dc3f60783117cbf96b1748e4589f6 106 Pfam PF06381 Protein of unknown function (DUF1073) 54 105 2.7E-10 T 21-04-2016 IPR024459 Protein of unknown function DUF1073 SDY_0812 9f8263a33f279520618667de1529bc87 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 8.5E-71 T 21-04-2016 IPR021303 Uncharacterised protein family, inner membrane, YbhQ SDY_0675 c679c30c75d1e2b30b5764888e9ae7cb 462 PIRSF PIRSF004729 1 462 3.4E-222 T 21-04-2016 IPR006230 Protein MutL SDY_0675 c679c30c75d1e2b30b5764888e9ae7cb 462 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 2.7E-268 T 21-04-2016 IPR006230 Protein MutL SDY_0675 c679c30c75d1e2b30b5764888e9ae7cb 462 Pfam PF13941 MutL protein 3 456 1.7E-132 T 21-04-2016 IPR006230 Protein MutL SDY_1848 b2cdcea1d0c57fe6f0d34de0d283b551 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 2.7E-29 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_1848 b2cdcea1d0c57fe6f0d34de0d283b551 71 SUPERFAMILY SSF68989 1 71 1.12E-22 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_1848 b2cdcea1d0c57fe6f0d34de0d283b551 71 Gene3D G3DSA:1.20.1280.40 1 71 2.0E-32 T 21-04-2016 IPR007985 Haemolysin expression modulating, HHA SDY_3657 99d34444f6019204eacc91de7027a774 94 Gene3D G3DSA:1.20.5.780 8 90 7.0E-15 T 21-04-2016 SDY_3657 99d34444f6019204eacc91de7027a774 94 PANTHER PTHR35401 1 94 4.0E-25 T 21-04-2016 SDY_3657 99d34444f6019204eacc91de7027a774 94 PANTHER PTHR35401:SF1 1 94 4.0E-25 T 21-04-2016 SDY_3657 99d34444f6019204eacc91de7027a774 94 SUPERFAMILY SSF47598 8 79 4.67E-19 T 21-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SDY_3657 99d34444f6019204eacc91de7027a774 94 Pfam PF08681 Protein of unknown function (DUF1778) 12 80 1.1E-19 T 21-04-2016 IPR014795 Vibrio phage ICP1, Orf50 SDY_1726 79bdc65cdbf13326cdd7128e12a93664 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 3.6E-20 T 21-04-2016 IPR006750 Putative inner membrane exporter, YdcZ SDY_4158 3bc4e4184dca2563a1268b52faeb682f 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 8.0E-99 T 21-04-2016 SDY_3544 965d3b6aad928400616601295654faa0 112 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 5 112 2.0E-59 T 21-04-2016 SDY_3544 965d3b6aad928400616601295654faa0 112 Pfam PF06411 HdeA/HdeB family 19 100 1.3E-23 T 21-04-2016 IPR010486 HNS-dependent expression A/B SDY_3544 965d3b6aad928400616601295654faa0 112 Gene3D G3DSA:1.10.890.10 28 101 1.0E-8 T 21-04-2016 IPR010486 HNS-dependent expression A/B SDY_3544 965d3b6aad928400616601295654faa0 112 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 6 107 26.155 T 21-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 SDY_4131 ec6b4adbf0c26e71cf4e850bdc2fde14 227 SUPERFAMILY SSF51182 97 202 6.38E-6 T 21-04-2016 IPR011051 RmlC-like cupin domain SDY_4131 ec6b4adbf0c26e71cf4e850bdc2fde14 227 Pfam PF07385 Protein of unknown function (DUF1498) 1 224 4.8E-99 T 21-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 SDY_4131 ec6b4adbf0c26e71cf4e850bdc2fde14 227 Gene3D G3DSA:2.60.120.10 136 183 2.2E-4 T 21-04-2016 IPR014710 RmlC-like jelly roll fold SDY_0371 94da4db91b4ea10daf60fb0bb235a533 77 Pfam PF15977 Winged helix-turn-helix DNA binding 8 75 9.9E-31 T 21-04-2016 SDY_0371 94da4db91b4ea10daf60fb0bb235a533 77 SUPERFAMILY SSF46785 7 71 9.93E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0371 94da4db91b4ea10daf60fb0bb235a533 77 Gene3D G3DSA:1.10.10.10 8 73 2.6E-5 T 21-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SDY_0848 20c7631a4ac28e77868b2cea0bc9534a 184 Pfam PF14301 Domain of unknown function (DUF4376) 73 180 7.0E-30 T 21-04-2016 IPR025484 Domain of unknown function DUF4376 SDY_2730 1b63a85a69b3fd4558531bc29c58c58b 293 PANTHER PTHR12277 23 291 5.3E-64 T 21-04-2016 SDY_2730 1b63a85a69b3fd4558531bc29c58c58b 293 Gene3D G3DSA:3.40.50.1820 48 285 4.5E-50 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2730 1b63a85a69b3fd4558531bc29c58c58b 293 Pfam PF12146 Serine aminopeptidase, S33 86 196 1.5E-13 T 21-04-2016 IPR022742 Serine aminopeptidase, S33 SDY_2730 1b63a85a69b3fd4558531bc29c58c58b 293 SUPERFAMILY SSF53474 32 289 6.72E-46 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_2762 796c880e674aa936368343c30f09d940 122 Pfam PF10973 Protein of unknown function (DUF2799) 32 111 4.4E-17 T 21-04-2016 IPR021242 Protein of unknown function DUF2799 SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 SUPERFAMILY SSF69304 28 157 1.96E-17 T 21-04-2016 SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 SUPERFAMILY SSF69304 303 411 1.96E-17 T 21-04-2016 SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 Pfam PF12566 Protein of unknown function (DUF3748) 73 189 1.6E-53 T 21-04-2016 IPR022223 Protein of unknown function DUF3748 SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 Pfam PF07676 WD40-like Beta Propeller Repeat 388 401 0.091 T 21-04-2016 IPR011659 WD40-like Beta Propeller SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 Gene3D G3DSA:2.120.10.30 238 403 2.5E-28 T 21-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SDY_4175 c97352fb81aa8fe5cb506444b558955a 414 Gene3D G3DSA:2.120.10.30 20 155 2.5E-28 T 21-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like SDY_2883 d086d906b73f14540e8928682b9e4549 347 Gene3D G3DSA:3.40.50.300 202 336 2.8E-26 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_2883 d086d906b73f14540e8928682b9e4549 347 Pfam PF13671 AAA domain 203 332 6.3E-22 T 21-04-2016 SDY_2883 d086d906b73f14540e8928682b9e4549 347 Gene3D G3DSA:1.10.3210.10 10 139 2.8E-5 T 21-04-2016 IPR006674 HD domain SDY_2883 d086d906b73f14540e8928682b9e4549 347 SUPERFAMILY SSF109604 9 142 1.29E-9 T 21-04-2016 SDY_2883 d086d906b73f14540e8928682b9e4549 347 SUPERFAMILY SSF52540 198 339 1.67E-8 T 21-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SDY_3303 9ce6f31d6cb9c299f7e8c100d5e49477 91 PANTHER PTHR33293 2 91 1.2E-29 T 21-04-2016 SDY_3303 9ce6f31d6cb9c299f7e8c100d5e49477 91 Pfam PF12759 InsA C-terminal domain 43 88 1.6E-28 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_3303 9ce6f31d6cb9c299f7e8c100d5e49477 91 Pfam PF03811 InsA N-terminal domain 2 36 2.7E-18 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_2299 be638f5b609a1bf65b04f79f6f14917d 125 Pfam PF13984 MsyB protein 4 125 3.1E-64 T 21-04-2016 IPR025729 MsyB protein SDY_0001 13fe4258b37e32edda386faa50ec5fdf 21 Hamap MF_01907 Thr operon leader peptide [thrL]. 1 21 11.934 T 21-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 SDY_0001 13fe4258b37e32edda386faa50ec5fdf 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 2.2E-9 T 21-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 SDY_0001 13fe4258b37e32edda386faa50ec5fdf 21 Pfam PF08254 Threonine leader peptide 1 21 4.9E-10 T 21-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 SDY_1515 a0b3a8711440733ddad6cccb4fc4c085 90 Pfam PF07383 Protein of unknown function (DUF1496) 34 89 4.6E-24 T 21-04-2016 IPR009971 Protein of unknown function DUF1496 SDY_4174 a8c3427a07da558bc39831b8863cde5d 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 75 1.4E-11 T 21-04-2016 IPR010780 Protein of unknown function DUF1375 SDY_4180 fba72c9751bdb1d06dc2bdb432c95981 132 Pfam PF06078 Bacterial protein of unknown function (DUF937) 19 107 2.9E-11 T 21-04-2016 IPR009282 Protein of unknown function DUF937 SDY_4180 fba72c9751bdb1d06dc2bdb432c95981 132 Gene3D G3DSA:1.10.10.690 1 131 1.4E-45 T 21-04-2016 IPR027405 YidB-like SDY_4180 fba72c9751bdb1d06dc2bdb432c95981 132 SUPERFAMILY SSF140804 3 130 9.81E-34 T 21-04-2016 IPR027405 YidB-like SDY_3013 3191da08eb9bd95683682679efaf6a9c 429 PANTHER PTHR35334:SF2 1 429 0.0 T 21-04-2016 SDY_3013 3191da08eb9bd95683682679efaf6a9c 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 4.8E-186 T 21-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 SDY_3013 3191da08eb9bd95683682679efaf6a9c 429 PANTHER PTHR35334 1 429 0.0 T 21-04-2016 SDY_2607 40a7020ae00c1ec205d5229a05bdacc3 72 PANTHER PTHR40613 1 72 4.2E-40 T 21-04-2016 SDY_2607 40a7020ae00c1ec205d5229a05bdacc3 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.4E-29 T 21-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SDY_2607 40a7020ae00c1ec205d5229a05bdacc3 72 PANTHER PTHR40613:SF1 1 72 4.2E-40 T 21-04-2016 SDY_2607 40a7020ae00c1ec205d5229a05bdacc3 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 4.0E-25 T 21-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor SDY_0366 ce81ca0874ec5876daa6163e6545ddf2 114 Pfam PF10953 Protein of unknown function (DUF2754) 45 114 6.6E-47 T 21-04-2016 IPR020490 Uncharacterised protein family YaiZ SDY_0366 ce81ca0874ec5876daa6163e6545ddf2 114 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 45 114 2.0E-35 T 21-04-2016 IPR020490 Uncharacterised protein family YaiZ SDY_3541 db89892a0028b59a2bbf154ea0e00ab3 125 Pfam PF03400 IS1 transposase 1 125 7.9E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_3541 db89892a0028b59a2bbf154ea0e00ab3 125 PANTHER PTHR33293 1 124 7.6E-42 T 21-04-2016 SDY_0816 ab0b143a555ffa30480912a9ab120b88 108 Pfam PF12759 InsA C-terminal domain 42 82 1.7E-13 T 21-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain SDY_0816 ab0b143a555ffa30480912a9ab120b88 108 Pfam PF03811 InsA N-terminal domain 1 35 1.5E-23 T 21-04-2016 IPR003220 InsA N-terminal domain GO:0006313 SDY_3596 46ffca36e923b77ec747679516e11656 146 Pfam PF10956 Protein of unknown function (DUF2756) 1 105 4.2E-53 T 21-04-2016 IPR020158 Protein of unknown function DUF2756 SDY_3596 46ffca36e923b77ec747679516e11656 146 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 146 2.0E-47 T 21-04-2016 IPR020158 Protein of unknown function DUF2756 SDY_2512 9117bbc343b0b643f07748ca67d2c7ad 162 PANTHER PTHR36926 1 162 2.9E-84 T 21-04-2016 SDY_2512 9117bbc343b0b643f07748ca67d2c7ad 162 PANTHER PTHR36926:SF1 1 162 2.9E-84 T 21-04-2016 SDY_2512 9117bbc343b0b643f07748ca67d2c7ad 162 Pfam PF02674 Colicin V production protein 4 141 1.6E-35 T 21-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SDY_2666 9eba18a1650dfa51f6230211eadc5766 345 Pfam PF06804 NlpB/DapX lipoprotein 42 343 4.1E-111 T 21-04-2016 IPR010653 NlpB/DapX lipoprotein SDY_2666 9eba18a1650dfa51f6230211eadc5766 345 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 10 344 39.322 T 21-04-2016 IPR014524 Outer membrane protein assembly factor BamC SDY_2666 9eba18a1650dfa51f6230211eadc5766 345 PIRSF PIRSF026343 10 345 9.0E-150 T 21-04-2016 IPR014524 Outer membrane protein assembly factor BamC SDY_1904 cec23b87dbcb2822c751fda67bdbd9a6 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.7E-34 T 21-04-2016 IPR024493 Protein of unknown function DUF2767 SDY_1904 cec23b87dbcb2822c751fda67bdbd9a6 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 69 5.0E-34 T 21-04-2016 SDY_1053 5972148c0e82168c630cd5564dfe2049 62 Pfam PF10781 Dextransucrase DSRB 1 60 4.2E-36 T 21-04-2016 IPR019717 Dextransucrase DSRB SDY_1053 5972148c0e82168c630cd5564dfe2049 62 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 29.631 T 21-04-2016 IPR019717 Dextransucrase DSRB SDY_1981 cda377872a50980c3ffe4e8605136705 106 PANTHER PTHR30462 11 106 1.6E-54 T 21-04-2016 SDY_1981 cda377872a50980c3ffe4e8605136705 106 Pfam PF06827 Zinc finger found in FPG and IleRS 29 55 5.0E-5 T 21-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SDY_1981 cda377872a50980c3ffe4e8605136705 106 PANTHER PTHR30462:SF1 11 106 1.6E-54 T 21-04-2016 SDY_1112 a69e29354d6ff1fedcf4eb83405ae1b9 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 1.7E-35 T 21-04-2016 IPR019620 Putative metal-binding protein SDY_1112 a69e29354d6ff1fedcf4eb83405ae1b9 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 2.0E-36 T 21-04-2016 IPR019620 Putative metal-binding protein SDY_0477 b68a17ee2a06132c2500b7e447b86ed0 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.349 T 21-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 SDY_0477 b68a17ee2a06132c2500b7e447b86ed0 133 Pfam PF07417 Transcriptional regulator Crl 5 122 1.1E-53 T 21-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 SDY_P026 c621f8b0cadb48ae8af4f71044528011 99 Pfam PF11791 Aconitate B N-terminal domain 1 99 5.7E-45 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_P026 c621f8b0cadb48ae8af4f71044528011 99 SUPERFAMILY SSF74778 1 99 1.26E-43 T 21-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SDY_1972 4b850e1ca97f25582dd2685be8911be1 95 Pfam PF13974 YebO-like protein 16 95 1.4E-32 T 21-04-2016 IPR025594 YebO-like protein SDY_1950 b7a76b946be6dcf584f3646741aff615 70 ProDom PD055765 YNCH ECS2059 1 70 1.0E-34 T 21-04-2016 IPR020099 Uncharacterised protein family YncH SDY_2210 121300445162426b9bfbf8661eea60dc 282 SUPERFAMILY SSF53448 6 256 1.69E-17 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2210 121300445162426b9bfbf8661eea60dc 282 Gene3D G3DSA:3.90.550.10 48 190 3.8E-9 T 21-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SDY_2826 d36f8c0df55993d163acc83b5de13b91 240 PANTHER PTHR21392 1 240 9.0E-142 T 21-04-2016 SDY_2826 d36f8c0df55993d163acc83b5de13b91 240 SMART SM01144 35 226 2.9E-72 T 21-04-2016 IPR005636 DTW SDY_2826 d36f8c0df55993d163acc83b5de13b91 240 PANTHER PTHR21392:SF1 1 240 9.0E-142 T 21-04-2016 SDY_2826 d36f8c0df55993d163acc83b5de13b91 240 Pfam PF03942 DTW domain 38 218 4.8E-43 T 21-04-2016 IPR005636 DTW SDY_1746 23a9dbcb368c1f15bb1b4d12b73d1f2b 112 Pfam PF11769 Protein of unknown function (DUF3313) 17 104 1.2E-21 T 21-04-2016 IPR021747 Protein of unknown function DUF3313 SDY_3425 78d16c237499433588ebc38c7b7d309e 367 PANTHER PTHR34138:SF1 1 346 2.6E-105 T 21-04-2016 SDY_3425 78d16c237499433588ebc38c7b7d309e 367 Pfam PF04085 rod shape-determining protein MreC 123 269 4.8E-36 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SDY_3425 78d16c237499433588ebc38c7b7d309e 367 PANTHER PTHR34138 1 346 2.6E-105 T 21-04-2016 SDY_3425 78d16c237499433588ebc38c7b7d309e 367 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 6.8E-127 T 21-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SDY_4358 2fcfad752433be9cb37e185faef55aec 109 Gene3D G3DSA:3.30.1660.10 43 109 3.1E-14 T 21-04-2016 IPR025543 Dodecin-like SDY_4358 2fcfad752433be9cb37e185faef55aec 109 SUPERFAMILY SSF159871 11 108 7.59E-19 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_4358 2fcfad752433be9cb37e185faef55aec 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 7.5E-15 T 21-04-2016 IPR010854 Domain of unknown function DUF1471 SDY_2115 2c1d609cfca4d8765c9ca47628d46f84 135 Pfam PF13262 Protein of unknown function (DUF4054) 13 125 8.9E-32 T 21-04-2016 IPR025127 Protein of unknown function DUF4054 SDY_0577 57fe61cd4920453b598d251d34da40de 185 Pfam PF10543 ORF6N domain 12 97 2.7E-15 T 21-04-2016 IPR018873 KilA-N, DNA-binding domain SDY_1384 39bc39f7e048191ffd74a60883e4b8b7 98 Pfam PF06064 Host-nuclease inhibitor protein Gam 1 98 3.5E-65 T 21-04-2016 IPR009274 Host-nuclease inhibitor Gam SDY_1384 39bc39f7e048191ffd74a60883e4b8b7 98 ProDom PD084412 GAM INHIBITOR HOST-NUCLEASE BACTERIPHAGE CP-933V BP- 933W PROPHAGE 1 98 1.0E-44 T 21-04-2016 IPR009274 Host-nuclease inhibitor Gam SDY_2699 a86c2982d6cb9c96a3a3cd99177ad874 176 PANTHER PTHR35603 3 168 4.4E-64 T 21-04-2016 SDY_2699 a86c2982d6cb9c96a3a3cd99177ad874 176 Pfam PF05433 Glycine zipper 2TM domain 73 114 7.6E-8 T 21-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SDY_2699 a86c2982d6cb9c96a3a3cd99177ad874 176 PANTHER PTHR35603:SF1 3 168 4.4E-64 T 21-04-2016 SDY_3877 c586fa431a17d1abeecb1001bf2284a0 168 Pfam PF04220 Der GTPase activator (YihI) 13 165 2.8E-54 T 21-04-2016 IPR007336 Der GTPase activator SDY_3877 c586fa431a17d1abeecb1001bf2284a0 168 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 168 17.004 T 21-04-2016 IPR007336 Der GTPase activator SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 Gene3D G3DSA:1.20.1250.20 264 443 4.0E-18 T 21-04-2016 SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 Pfam PF00083 Sugar (and other) transporter 57 451 1.1E-32 T 21-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 SUPERFAMILY SSF103473 14 449 1.2E-63 T 21-04-2016 IPR020846 Major facilitator superfamily domain SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 Gene3D G3DSA:1.20.1250.20 25 218 1.0E-25 T 21-04-2016 SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 PANTHER PTHR24064:SF293 10 452 2.6E-180 T 21-04-2016 SDY_1492 27d6772f3a42fc2b3e5cbfde6f976ba8 459 PANTHER PTHR24064 10 452 2.6E-180 T 21-04-2016 SDY_2604 edf0589d438216fb284a5c4103675fbc 113 Pfam PF14282 FlxA-like protein 14 92 9.2E-15 T 21-04-2016 IPR025577 FlxA-like protein SDY_1928 af1902d06a57c959bf6063907c0b8919 138 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 12 110 2.9E-35 T 21-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family SDY_1928 af1902d06a57c959bf6063907c0b8919 138 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 21 106 1.2E-29 T 21-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family SDY_1001 fb4ad789578935ae566aa134c0eb4cdb 179 Pfam PF06496 Protein of unknown function (DUF1097) 24 158 2.2E-38 T 21-04-2016 IPR009476 Protein of unknown function DUF1097 SDY_3618 77616d45573856dd3607e2b4a9f95827 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 6.9E-32 T 21-04-2016 IPR019635 Protein of unknown function DUF2500 SDY_2161 39afb12f8e36ff9141ee3713e61b64bd 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 19.177 T 21-04-2016 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 SDY_P015 29a05df46f7ab701c3bee35054067ad2 192 Pfam PF10712 NAD-specific glutamate dehydrogenase 1 192 2.1E-78 T 21-04-2016 IPR019651 Glutamate dehydrogenase, NAD-specific SDY_2235 9593096069e19a2cf008c5460c4d0588 131 PANTHER PTHR33293 6 126 1.3E-24 T 21-04-2016 SDY_2235 9593096069e19a2cf008c5460c4d0588 131 PANTHER PTHR33293:SF1 6 126 1.3E-24 T 21-04-2016 SDY_2235 9593096069e19a2cf008c5460c4d0588 131 Pfam PF03400 IS1 transposase 2 131 3.4E-75 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4589 364c9f9b75aa345537aa29ad539fcabe 157 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 157 2.0E-54 T 21-04-2016 IPR004914 Antirestriction protein SDY_4589 364c9f9b75aa345537aa29ad539fcabe 157 Pfam PF03230 Antirestriction protein 62 157 3.3E-37 T 21-04-2016 IPR004914 Antirestriction protein SDY_4527a e3a271e9808a431ab2c793771afd9aca 96 ProDom PD060861 YJBL ECS5030 1 84 7.0E-40 T 21-04-2016 IPR020276 Uncharacterised protein family, YjbL SDY_4199 66a010cadc457a49276af54cbc0caa3a 445 Pfam PF00860 Permease family 31 404 3.6E-42 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_4199 66a010cadc457a49276af54cbc0caa3a 445 PIRSF PIRSF005353 5 444 9.2E-177 T 21-04-2016 IPR026033 Purine permease PbuG-like SDY_4199 66a010cadc457a49276af54cbc0caa3a 445 PANTHER PTHR11119 8 431 2.2E-181 T 21-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SDY_4199 66a010cadc457a49276af54cbc0caa3a 445 PANTHER PTHR11119:SF9 8 431 2.2E-181 T 21-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SDY_4445 683af9c30b035124dbbc94037af89bb7 158 PANTHER PTHR35335 1 158 8.2E-44 T 21-04-2016 SDY_4445 683af9c30b035124dbbc94037af89bb7 158 PANTHER PTHR35335:SF1 1 158 8.2E-44 T 21-04-2016 SDY_4445 683af9c30b035124dbbc94037af89bb7 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 6.3E-33 T 21-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SDY_4076 412d640e28600e473183092aabd6aaa7 274 Pfam PF02498 BRO family, N-terminal domain 10 101 1.1E-6 T 21-04-2016 IPR003497 BRO N-terminal domain SDY_0998 21f1ebd803232d3148a88c528b8b6dd4 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 8.5E-35 T 21-04-2016 IPR018893 Type VIII secretion system, CsgF SDY_0680 3c6ede094904aa1682d07f9df5e87d63 523 PANTHER PTHR30365 377 521 1.1E-270 T 21-04-2016 SDY_0680 3c6ede094904aa1682d07f9df5e87d63 523 PANTHER PTHR30365 1 311 1.1E-270 T 21-04-2016 SDY_0680 3c6ede094904aa1682d07f9df5e87d63 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 5.2E-173 T 21-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SDY_0680 3c6ede094904aa1682d07f9df5e87d63 523 PANTHER PTHR30365:SF0 377 521 1.1E-270 T 21-04-2016 SDY_0680 3c6ede094904aa1682d07f9df5e87d63 523 PANTHER PTHR30365:SF0 1 311 1.1E-270 T 21-04-2016 SDY_1471 56d75d2745bce6162803fb803905f12c 185 Pfam PF10971 Protein of unknown function (DUF2773) 105 185 3.7E-47 T 21-04-2016 IPR024497 Protein of unknown function DUF2773 SDY_1471 56d75d2745bce6162803fb803905f12c 185 ProDom PD029376 YDBD YKIA ECS0442 ECS2009 105 183 1.0E-38 T 21-04-2016 IPR024497 Protein of unknown function DUF2773 SDY_4340 c2c089020ff001769443add993bf183b 332 Pfam PF01757 Acyltransferase family 5 318 3.4E-35 T 21-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SDY_4340 c2c089020ff001769443add993bf183b 332 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 38.354 T 21-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 SDY_4614 7b7eb8321e6a1c9250bb885bf15ce12f 165 Pfam PF10696 Protein of unknown function (DUF2501) 85 163 4.1E-27 T 21-04-2016 IPR019637 Protein of unknown function DUF2501 SDY_2772 66a26c8e2c3c6aae8fffd9c12cd18e3c 201 Pfam PF11041 Protein of unknown function (DUF2612) 5 190 2.3E-63 T 21-04-2016 IPR021283 Protein of unknown function DUF2612 SDY_1988 b2118839eb7ef39ac77b6544f5703d6b 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 4.4E-35 T 21-04-2016 IPR009954 Protein of unknown function DUF1482 SDY_1485 834628c6391cbb7c33fde8ac328b6104 248 PANTHER PTHR38776 4 248 6.0E-93 T 21-04-2016 SDY_1485 834628c6391cbb7c33fde8ac328b6104 248 Pfam PF06629 MltA-interacting protein MipA 28 248 3.5E-52 T 21-04-2016 IPR010583 MltA-interacting MipA SDY_3979 a1d7a82621861acf64f75e6389f719d2 87 Gene3D G3DSA:3.30.70.260 1 74 3.3E-14 T 21-04-2016 SDY_3979 a1d7a82621861acf64f75e6389f719d2 87 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 0.005 T 21-04-2016 SDY_3979 a1d7a82621861acf64f75e6389f719d2 87 SUPERFAMILY SSF55021 3 75 4.12E-12 T 21-04-2016 SDY_3979 a1d7a82621861acf64f75e6389f719d2 87 Pfam PF13710 ACT domain 13 73 1.6E-27 T 21-04-2016 SDY_1015 ae75126ffa957032772d4ef78294343b 273 Pfam PF06067 Domain of unknown function (DUF932) 37 262 2.6E-54 T 21-04-2016 IPR026325 Protein of unknown function DUF932 SDY_2573 3d080a7b9b1e5e66ff97ae2ca4aacfa1 210 Pfam PF10938 YfdX protein 55 205 2.5E-46 T 21-04-2016 IPR021236 Uncharacterised protein family YfdX SDY_4359 4407432ac4c13960262703ed1d57473f 249 Gene3D G3DSA:3.40.50.1820 2 249 1.6E-50 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_4359 4407432ac4c13960262703ed1d57473f 249 Pfam PF00326 Prolyl oligopeptidase family 86 234 8.1E-11 T 21-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SDY_4359 4407432ac4c13960262703ed1d57473f 249 SUPERFAMILY SSF53474 9 249 7.97E-38 T 21-04-2016 IPR029058 Alpha/Beta hydrolase fold SDY_3954 5e0bf88725e3a3a46a81a3a32122edef 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 43.025 T 21-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 SDY_3954 5e0bf88725e3a3a46a81a3a32122edef 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 446 1.7E-263 T 21-04-2016 SDY_4544 ea136d797208a3c9bb3bb033e4f2facb 691 PANTHER PTHR30441 1 690 2.7E-191 T 21-04-2016 SDY_4544 ea136d797208a3c9bb3bb033e4f2facb 691 PANTHER PTHR30441:SF2 1 690 2.7E-191 T 21-04-2016 SDY_4544 ea136d797208a3c9bb3bb033e4f2facb 691 Pfam PF05170 AsmA family 6 587 4.5E-186 T 21-04-2016 IPR007844 AsmA SDY_3935 a003244990f273c5cba8d994f8efd6dc 235 PANTHER PTHR38765 3 235 5.7E-90 T 21-04-2016 SDY_3935 a003244990f273c5cba8d994f8efd6dc 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 5.4E-87 T 21-04-2016 IPR007435 Protein of unknown function DUF484 SDY_4481 5507b0817a5e8a06fe739bd3a56b07dc 111 PANTHER PTHR36455:SF1 2 106 5.4E-31 T 21-04-2016 SDY_4481 5507b0817a5e8a06fe739bd3a56b07dc 111 Pfam PF05717 IS66 Orf2 like protein 9 102 1.0E-33 T 21-04-2016 IPR008878 Transposase IS66, Orf2 SDY_4481 5507b0817a5e8a06fe739bd3a56b07dc 111 PANTHER PTHR36455 2 106 5.4E-31 T 21-04-2016 SDY_1392 fc308b3c1a1b7761b9e4d1db55923ea9 135 Pfam PF05696 Protein of unknown function (DUF826) 55 129 1.6E-51 T 21-04-2016 IPR008544 Protein of unknown function DUF826 SDY_0578 59ec76603b05a3665bf4b9d6e9301e95 184 Pfam PF06576 Protein of unknown function (DUF1133) 1 175 3.8E-101 T 21-04-2016 IPR010557 Protein of unknown function DUF1133 SDY_4054 212b7005f9131b44fce92573229b880e 417 Pfam PF04932 O-Antigen ligase 201 356 1.9E-6 T 21-04-2016 IPR007016 O-antigen ligase-related SDY_0270 bb566f609d166ceb266573c33086c977 271 Pfam PF11392 Protein of unknown function (DUF2877) 159 263 1.3E-28 T 21-04-2016 IPR021530 Protein of unknown function DUF2877 SDY_4376 2dbd6ffe498660e24afe406b63eeb16e 224 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 223 2.3E-34 T 21-04-2016 IPR007340 Opacity-associated protein A SDY_4376 2dbd6ffe498660e24afe406b63eeb16e 224 Pfam PF08525 Opacity-associated protein A N-terminal motif 35 62 4.3E-9 T 21-04-2016 IPR013731 Opacity-associated protein A, N-terminal SDY_4557 eb850812d390ee528b1635418291431e 125 Pfam PF03400 IS1 transposase 1 125 4.4E-74 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4557 eb850812d390ee528b1635418291431e 125 PANTHER PTHR33293 1 124 5.6E-43 T 21-04-2016 SDY_3147 11d4dfdf4a2c77c3182974702245c519 169 Gene3D G3DSA:1.20.120.330 2 168 6.4E-62 T 21-04-2016 SDY_3147 11d4dfdf4a2c77c3182974702245c519 169 Pfam PF05068 Mannitol repressor 5 167 3.4E-50 T 21-04-2016 IPR007761 Mannitol repressor SDY_3147 11d4dfdf4a2c77c3182974702245c519 169 SUPERFAMILY SSF158668 2 167 7.46E-53 T 21-04-2016 SDY_3147 11d4dfdf4a2c77c3182974702245c519 169 PANTHER PTHR37941 1 168 3.9E-49 T 21-04-2016 SDY_1490 0ade91b1c5b362aa46e175b7bbcd5723 105 Pfam PF07023 Protein of unknown function (DUF1315) 20 94 1.3E-28 T 21-04-2016 IPR009749 Protein of unknown function DUF1315 SDY_3687 68db2759e58c277af36898fca5635511 147 Pfam PF10748 Protein of unknown function (DUF2531) 16 147 1.1E-69 T 21-04-2016 IPR019684 Protein of unknown function DUF2531 SDY_3116 013b5ebfb6769a2e48bd8c22dd157a26 335 Pfam PF06717 Protein of unknown function (DUF1202) 14 320 4.8E-193 T 21-04-2016 IPR009592 Protein of unknown function DUF1202 SDY_3727 424bfb681b8dd6f5cf68e8b54488d4a6 196 Gene3D G3DSA:1.20.1590.10 1 192 4.1E-93 T 21-04-2016 IPR023381 YP001051499.1-like domain SDY_3727 424bfb681b8dd6f5cf68e8b54488d4a6 196 Pfam PF04222 Protein of unknown function (DUF416) 5 192 1.2E-83 T 21-04-2016 IPR007338 Protein of unknown function DUF416 SDY_1451a fd562dddff8d04db436c7f374312e667 61 Pfam PF07041 Protein of unknown function (DUF1327) 1 60 9.9E-32 T 21-04-2016 IPR009759 Bacteriophage ES18, Gp24 SDY_3286 a0bf0470454ba5ee739dc2f9ee654c43 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.7E-21 T 21-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III SDY_2209 00652fa50fcfd4a58effd64327ed6eb5 380 ProDom PD140121 POLYMERASE O-ANTIGEN TRANSMEMBRANE POLYSACCHARIDE WZY REPEAT MEMBRANE UNIT OLIGOSACCHARIDE CPS6AI 1 380 2.0E-175 T 21-04-2016 SDY_2209 00652fa50fcfd4a58effd64327ed6eb5 380 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 27 369 9.5E-16 T 21-04-2016 SDY_4156 22907842064db6456ba1905c883dbdc9 32 Pfam PF08049 IlvB leader peptide 1 32 1.4E-18 T 21-04-2016 IPR012566 IlvB leader peptide SDY_4087 fcd4d64cf48b252038ae27fd2f961081 569 Pfam PF05170 AsmA family 1 523 6.7E-25 T 21-04-2016 IPR007844 AsmA SDY_0493 94da87f93d5338a0ba3c30a8b95cc60d 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 3.3E-42 T 21-04-2016 IPR010590 Protein of unknown function DUF1158 SDY_0493 94da87f93d5338a0ba3c30a8b95cc60d 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 1.0E-40 T 21-04-2016 IPR010590 Protein of unknown function DUF1158 SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 SUPERFAMILY SSF53335 30 238 1.01E-26 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 Gene3D G3DSA:3.40.50.150 30 262 5.4E-23 T 21-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 161 185 1.2E-11 T 21-04-2016 SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 28 44 1.2E-11 T 21-04-2016 SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 1.2E-11 T 21-04-2016 SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 142 1.2E-11 T 21-04-2016 SDY_1926 645fb2ffe2d3c62b90c4115198e91562 489 Pfam PF07669 Eco57I restriction-modification methylase 134 225 5.3E-7 T 21-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 SDY_3939 a329bec185ea08e7c6cfc47e859ad9db 161 PIRSF PIRSF006864 1 161 6.5E-111 T 21-04-2016 IPR016498 Uncharacterised conserved protein UCP006864 SDY_0771 d946988124bf8f3612e0d2c62fee3116 109 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 10 105 2.2E-23 T 21-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly SDY_0960 89c7ff0f72e2be28cbffc2b769735359 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 690 1.7E-265 T 21-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH SDY_3418 e6807ec5cc83f681ac62c68c1bc8ef12 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.5E-20 T 21-04-2016 IPR012451 Protein of unknown function DUF1656 SDY_3418 e6807ec5cc83f681ac62c68c1bc8ef12 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.567 T 21-04-2016 IPR012451 Protein of unknown function DUF1656 SDY_4030 d67a5e5627ab8f4add6a618fe51af563 125 Pfam PF03400 IS1 transposase 1 124 1.5E-72 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_4030 d67a5e5627ab8f4add6a618fe51af563 125 PANTHER PTHR33293 1 115 5.0E-42 T 21-04-2016 SDY_1265 a78b6767bbbe1f70b38f59986127bd41 44 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 10 44 4.2E-24 T 21-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr SDY_0299 de997f48434f4491098e1946001ba44c 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 3.1E-52 T 21-04-2016 IPR005619 Uncharacterised protein family, YajG SDY_0299 de997f48434f4491098e1946001ba44c 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 9.5E-8 T 21-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site SDY_1974 50742b438fde18c9298f5c246d366197 79 Pfam PF13996 YobH-like protein 2 71 2.4E-38 T 21-04-2016 IPR025611 YobH-like protein SDY_4239 3b587186a19631b54e5818830184cce1 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 5.2E-27 T 21-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster SDY_1183 9ac0aa3bdccc5c659d9308922050c3a9 130 Pfam PF06366 Flagellar protein FlhE 28 130 5.7E-37 T 21-04-2016 IPR009420 Flagellar protein FlhE SDY_0461 fa74e6d908c96e1b6cb4869caf8ec3c4 169 Pfam PF10777 Inner membrane protein YlaC 14 165 1.2E-66 T 21-04-2016 IPR019713 Inner membrane protein YlaC SDY_3114 1ec15bf8020179e500e9c92c944b4e14 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 235 9.5E-41 T 21-04-2016 IPR021307 Protein of unknown function DUF2884 SDY_4349 a55d80c18bd6e19f345bdfd48fe451d8 276 Pfam PF11254 Protein of unknown function (DUF3053) 55 270 5.9E-89 T 21-04-2016 IPR021413 Protein of unknown function DUF3053 SDY_2882 03df65db0126c44d67107f8a697d19d7 235 SUPERFAMILY SSF56091 10 226 1.58E-31 T 21-04-2016 SDY_2882 03df65db0126c44d67107f8a697d19d7 235 Pfam PF09414 RNA ligase 38 205 1.6E-25 T 21-04-2016 IPR021122 RNA ligase domain, REL/Rln2 SDY_1355 62cdd0aafca0d2db85e44d241109e20b 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.773 T 21-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 SDY_1355 62cdd0aafca0d2db85e44d241109e20b 102 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 1.2E-20 T 21-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SDY_0005 c64f993f7bd2141679ec26d6e6121c1b 98 Pfam PF10697 Protein of unknown function (DUF2502) 25 72 3.2E-15 T 21-04-2016 IPR019638 Protein of unknown function DUF2502 SDY_1049 d2701625661e9ab22487ce301bc6f4de 60 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 47 1.3E-7 T 21-04-2016 IPR019226 Protein of unknown function DUF2158 SDY_1161 2447345648d76bb7d5abb06c87338eef 150 PANTHER PTHR33293 13 149 9.9E-48 T 21-04-2016 SDY_1161 2447345648d76bb7d5abb06c87338eef 150 Pfam PF03400 IS1 transposase 20 150 1.1E-78 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 SDY_P095 88a7455157c7b3356ea6d0852654d728 90 Pfam PF04453 Organic solvent tolerance protein 2 88 1.5E-13 T 21-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SDY_0961 133fc4fae2294cfcfbfce8063d7fe682 248 Pfam PF06251 Capsule biosynthesis GfcC 21 247 7.2E-88 T 21-04-2016 IPR010425 Domain of unknown function DUF1017 SDY_1937 9b875f158a8efa9d47cded8a23df00bd 73 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 8.7E-36 T 21-04-2016 IPR014321 Phage shock protein, PspD SDY_1937 9b875f158a8efa9d47cded8a23df00bd 73 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 7.2E-32 T 21-04-2016 IPR014321 Phage shock protein, PspD SDY_1362 2f7611af1672614622d32d671b386112 57 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 57 25.98 T 21-04-2016 IPR020887 Uncharacterised protein family UPF0509 SDY_1763 0714669f49e7f926016fe7d2136c5048 57 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 1 57 3.0E-26 T 21-04-2016 SDY_4220 ed15a03e79734cdf3830944fa9cc5cf5 245 Pfam PF06251 Capsule biosynthesis GfcC 19 245 1.5E-90 T 21-04-2016 IPR010425 Domain of unknown function DUF1017 SDY_0367 22b6729cd7c0b4831c17c18b5ed63b29 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 7.5E-49 T 21-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 SDY_0367 22b6729cd7c0b4831c17c18b5ed63b29 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 1.0E-54 T 21-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 SDY_0452 ab211890afd84c85398a576edb952328 175 Pfam PF07445 Primosomal replication protein priC 9 173 1.1E-45 T 21-04-2016 IPR010890 Primosomal replication PriB/PriC SDY_1009 6e98ebf74176d7f6c29863f6e3b00aad 124 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 3.4E-63 T 21-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system SDY_3223 f286bdb00a24cff1c4d9f067b4d15a9a 199 Pfam PF12883 Protein of unknown function (DUF3828) 130 177 0.0028 T 21-04-2016 IPR024289 Domain of unknown function DUF3828 SDY_3223 f286bdb00a24cff1c4d9f067b4d15a9a 199 Pfam PF12883 Protein of unknown function (DUF3828) 1 34 3.7E-7 T 21-04-2016 IPR024289 Domain of unknown function DUF3828 SDY_2120 7a59e25944da37bc389f4bd81d15c196 87 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 14 75 8.4E-12 T 21-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 SDY_0773 42211595e9493ff8d48bcefc7217928c 208 Pfam PF14301 Domain of unknown function (DUF4376) 96 203 4.3E-29 T 21-04-2016 IPR025484 Domain of unknown function DUF4376 SDY_2524 5330ef2469142976e5ec195c1e8c17c5 92 Pfam PF08891 YfcL protein 4 87 4.7E-35 T 21-04-2016 IPR014987 Uncharacterised protein family YfcL SDY_1465 42c44b8d9ad9d07a9af6e724b40405b8 879 Pfam PF11739 Dicarboxylate transport 657 858 7.3E-64 T 21-04-2016 IPR021730 Dicarboxylate transport SDY_0081 908733548c4cd04ee5c939e121d1cec3 238 ProDom PD051027 YABQ GENOME ECS0061 YABP 192 238 1.0E-19 T 21-04-2016 SDY_0458 59f4d82cd10395502e6959ccb0935bc9 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 5.5E-62 T 21-04-2016 IPR019693 Biofilm formation regulator YbaJ SDY_1448 9e4710696ef080b17656383f31c5ce33 80 Pfam PF08410 Domain of unknown function (DUF1737) 8 54 2.0E-15 T 21-04-2016 IPR013619 Domain of unknown function DUF1737 SDY_P016 675f76b6473ee08874ff58ec859725d5 39 Pfam PF10712 NAD-specific glutamate dehydrogenase 1 39 2.6E-13 T 21-04-2016 IPR019651 Glutamate dehydrogenase, NAD-specific SDY_0999 0c2b7a1c69f44bfde6bee85da65fe285 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 1.5E-78 T 21-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 SDY_4280 b11af525f4805cacf824d81f6f4c4ece 200 Pfam PF05987 Bacterial protein of unknown function (DUF898) 13 166 1.3E-32 T 21-04-2016 IPR010295 Protein of unknown function DUF898 SDY_2046 574a660b50ebad7f59bf783d82cafa49 125 Pfam PF07233 Protein of unknown function (DUF1425) 34 124 7.4E-26 T 21-04-2016 IPR010824 Protein of unknown function DUF1425 SDY_0333 acfdfc313a4157d8da272efbd4ceff4d 71 Pfam PF03400 IS1 transposase 1 71 5.9E-35 T 21-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313